RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ALAS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000158578

Ensembl transcript IDs: ENST00000335854.8, ENST00000396198.7, ENST00000455688.2, ENST00000463868.5, ENST00000477869.6, ENST00000493869.2, ENST00000498636.1, ENST00000644983.1, ENST00000650242.1

Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGAGCGCAGGTGGGGTGTaGATCCTAGGCAGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQSAGGV*ILGSWL
Trigger: AAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCT...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
3UTR-3UTR CCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCAAGTGAAGCGCAGGTaGGGTGTGAATCCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRQVKRR*GVNPRQ
Trigger: CTGCCTAGGATTCACACCCCACCTGCGCTTCACTTG...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
3UTR-3UTR TCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAAGCGCAGGTGGGGTGTaGATCCTAGGCAGCTGGCTT +
Preference number: 2 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRSAGGV*ILGSWL
Trigger: AAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCT...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
3UTR-3UTR CCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAAGTGAAGCGCAGGTaGGGTGTGAATCCTAGGCAG +
Preference number: 2 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRQVKRR*GVNPRQ
Trigger: CTGCCTAGGATTCACACCCCACCTGCGCTTCACTTG...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGGACCCAAGTGAAGCGCAGGTGGGGTGTGAATCCTAGGCAGCTGGCTTCTCAGGCTCGCCTCAGGGCTTaGCCCTCCTCTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: WTQVKRRWGVNPRQLASQARLRA*PSSPLS
Trigger: GCTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGC...CTGAGAAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCTTCACTTGGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp GCCTGGACCCAAGTGAAGCGCAGGTGGGGTGTGAATCCTAGGCAGCTGGCTTCTCCAAGTCACGGGTGCTaGCAATGTAGCCGCCCACAC +
Preference number: 4 (lower is better)
Translates to: AWTQVKRRWGVNPRQLASPSHGC*QCSRPH
Trigger: GTGTGGGCGGCTACATTGCCAGCACCCGTGACTTGG...AGAAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCTTCACTTGGGTCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp TGGACCCAAGTGAAGCGCAGGTGGGGTGTGAATCCTAGGCAGCTGGCTTCTCAGCCACCAAGTCACGGGTaGTGGCAATGTAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: WTQVKRRWGVNPRQLASQPPSHG*WQCSRP
Trigger: TGGGCGGCTACATTGCCAGCACCCGTGACTTGGTGG...CTGAGAAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCTTCACTTGGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp TTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGGCCACAGACACATCCTaGAGGGGCAGCCCCACCGCA +
Preference number: 4 (lower is better)
Translates to: FSGIGGDILGPHVPEVGTATDTS*RGSPTA
Trigger: TGCGGTGGGGCTGCCCCTCCAGGATGTGTCTGTGGC...CGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp GGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAGGAGAAGAGCAGGGCTaGGTCCTTCTGGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GFSGIGGDILGPHVPEVGGEEQG*VLLVQL
Trigger: GAGCTGCACCAGAAGGACTCAGCCCTGCTCTTCTCC...TCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCGCTGGCGCATGTGCTTaGCATTGCGCTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFAGACA*HCAGGL
Trigger: GAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGC...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGAAGGCCCCTGTCCATaGGTAGCTGGCGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVEGPCP*VAGACA
Trigger: AGCACATGCGCCAGCTACTCATGGACAGGGGCCTTC...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp GGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAAGCGCAGGTGGGGTGTaGATCCTAGGCAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GFSGIGGDILGPHVPEVGSAGGV*ILGSWL
Trigger: AAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCT...TCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTATGCTTGACATTGCGCTaGTGGGCTCGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVCLTLR*WARLRA
Trigger: AGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCA...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp GCCTGGACCCAAGTGAAGCGCAGGTGGGGTGTGAATCCTAGGCAGCTGGCTTCTCAAGTGAAGCGCAGGTaGGGTGTGAATCCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: AWTQVKRRWGVNPRQLASQVKRR*GVNPRQ
Trigger: CTGCCTAGGATTCACACCCCACCTGCGCTTCACTTG...AGAAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCTTCACTTGGGTCCAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCGGCCCTCCTCTCCCTTaGGCAGCCGCACAGATTCTA +
Preference number: 4 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFGPPLP*AAAQIL
Trigger: TAGAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCC...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTACTCAGGCATAGGTGGTaGCATACTGGGGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVLRHRW*HTGAPC
Trigger: ACATGGGGCCCCAGTATGTCACCACCTATGCCTGAG...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp GCAGCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAAGTAGCTGGCGCATGTaGTTGACATTGCGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: AAGFSGIGGDILGPHVPESSWRM*LTLRWW
Trigger: CCACCAGCGCAATGTCAAGCACATGCGCCAGCTACT...TTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGCTCGCCTCAGGGCTTaGCCCTCCTCTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGARLRA*PSSPLS
Trigger: GCTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACCAGCTCCAGCACCATaGCGCTGCAGGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGPAPAP*RCRVSC
Trigger: ACAGGAGACCCTGCAGCGTCATGGTGCTGGAGCTGG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAATGGTTGCCTGCGTCTaGGTAAATCTCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: GFSGIGGDILGPHVPEVGMVACV*VNLAPW
Trigger: CCAGGGTGCGAGATTTACTCAGACGCAGGCAACCAT...TCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCCCTCGAGGGGACAGATaGCACCATCCATGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFPRGDR*HHPWSG
Trigger: TCCACTCCATGGATGGTGCCATCTGTCCCCTCGAGG...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp GGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAAGGGCCCCATACTGGTaGGACACATCACACAACTCC +
Preference number: 4 (lower is better)
Translates to: GFSGIGGDILGPHVPEVGRAPYW*DTSHNS
Trigger: GGAGTTGTGTGATGTGTCCCACCAGTATGGGGCCCT...TCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGGAGTTCCGACAGCATaGAGGGACAGTGGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGGVPTA*RDSGPS
Trigger: CGAAGGGCCACTGTCCCTTCATGCTGTCGGAACTCC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTACAGGGTCATTGTGCCTaGAGACAAACTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVQGHCA*RQTWLL
Trigger: GAGCAGCCAAGTTTGTCTTCAGGCACAATGACCCTG...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACCACCAAGTCACGGGTaGTGGCAATGTAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGPPSHG*WQCSRP
Trigger: TGGGCGGCTACATTGCCAGCACCCGTGACTTGGTGG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp GCAGCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAAGATGGCACCATCCATaGAGTGGACAGTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: AAGFSGIGGDILGPHVPERWHHP*SGQSQR
Trigger: CCTTTGAGACTGTCCACTCCATGGATGGTGCCATCT...TTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACCTGTTGCCCTGCACTaGGGACGAACGAATGACAGG +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGPVALH*GRTNDR
Trigger: CCTGTCATTCGTTCGTCCTCAGTGCAGGGCAACAGG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACACAGAGCTTGCTGTTaGGTGCTGCATTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGHRACC*VLHCPP
Trigger: GGGTGGGCAATGCAGCACTCAACAGCAAGCTCTGTG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAGTTCCCACTCACTCATaGGCTCAAAGTGTACAGGAC +
Preference number: 4 (lower is better)
Translates to: GFSGIGGDILGPHVPEVGVPTHS*AQSVQD
Trigger: GTCCTGTACACTTTGAGCTCATGAGTGAGTGGGAAC...TCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp GCAGCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGAAGACAAACTTGGCTaGTCCACTGTTACGGATACC +
Preference number: 4 (lower is better)
Translates to: AAGFSGIGGDILGPHVPEEDKLG*STVTDT
Trigger: GGTATCCGTAACAGTGGAGCAGCCAAGTTTGTCTTC...TTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp TTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGGACGGCGACAGAAATTaGAGGCAGCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: FSGIGGDILGPHVPEVGTDGDRN*RQPQTH
Trigger: ATGTGTCTGTGGCTGCCTGCAATTTCTGTCGCCGTC...CGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGCAGGGTCTCCTGTGTaGCTTGCAAGACCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGAGSPV*LARPEG
Trigger: ACCCTCAGGTCTTGCAAGCCACACAGGAGACCCTGC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGGTAAATCTCGCACCCTaGCAGGATCTTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: FSGIGGDILGPHVPEVGTVNLAP*QDLGQG
Trigger: ACCTTGGCCAAGATCCTGCCAGGGTGCGAGATTTAC...CGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCGCACCATCCATGGAGTaGACAGTCTCAAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFAPSME*TVSKAT
Trigger: TGTGGCCTTTGAGACTGTCCACTCCATGGATGGTGC...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACCTCGAGGGGACAGATaGCACCATCCATGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGPRGDR*HHPWSG
Trigger: TCCACTCCATGGATGGTGCCATCTGTCCCCTCGAGG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAAAACTTACTGGTGCCTaGGATGTTGCGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGKLTGA*DVAGAT
Trigger: GGTGGCACCCGCAACATCTCAGGCACCAGTAAGTTT...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGAAGGCCCCTGTCCATaGGTAGCTGGCGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPEGPCP*VAGACA
Trigger: AGCACATGCGCCAGCTACTCATGGACAGGGGCCTTC...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTTGGTGCCTGAGATGTTaGGGGTGCCACCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPWCLRC*GCHQLQ
Trigger: CTGGAGCTGGTGGCACCCGCAACATCTCAGGCACCA...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTATGGTCAGGGTCATTGTaGCTGAAGACAAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVWSGSL*LKTNLA
Trigger: AGCCAAGTTTGTCTTCAGGCACAATGACCCTGACCA...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp TTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGGGTAAAGATGAAGCCTaGAGCATAGGAGCGCACCAT +
Preference number: 4 (lower is better)
Translates to: FSGIGGDILGPHVPEVGTGKDEA*SIGAHH
Trigger: ATGGTGCGCTCCTATGCTGCAGGCTTCATCTTTACC...CGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTACCTTCCCAGAGATCTaGTCCTGCTCCTGGGGACCG +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPTFPEI*SCSWGP
Trigger: CGGTCCCCAGGAGCAGGAGCAGATCTCTGGGAAGGT...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR CCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAAGCATGAAGGGACAGTaGCCCTTCGCCCAAGATGGA +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGSMKGQ*PFAQDG
Trigger: TCCATCTTGGGCGAAGGGCCACTGTCCCTTCATGCT...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGCTGTCCATGAGTAGCTaGCGCATGTGCTTGACATTG +
Preference number: 4 (lower is better)
Translates to: FSGIGGDILGPHVPEVGTLSMSS*RMCLTL
Trigger: CAATGTCAAGCACATGCGCCAGCTACTCATGGACAG...CGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR TCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACAGGGTCATTGTGCCTaGAGACAAACTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGQGHCA*RQTWLL
Trigger: GAGCAGCCAAGTTTGTCTTCAGGCACAATGACCCTG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGGCTGGCGCATGTGCTTaGCATTGCGCTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRAGACA*HCAGGL
Trigger: GAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGC...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTCTCAGGCATAGGTGGTaGCATACTGGGGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPLRHRW*HTGAPC
Trigger: ACATGGGGCCCCAGTATGTCACCACCTATGCCTGAG...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGATTGGGCAAAGGGATATaGATCAGCCCAGCGGTTCAC +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGLGKGI*ISPAVH
Trigger: GTGAACCGCTGGGCTGATGCATATCCCTTTGCCCAA...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTATCATGGAAGCATGGTTaGCTGCGTCTGAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVSWKHG*LRLSKS
Trigger: AGATTTACTCAGACGCAGGCAACCATGCTTCCATGA...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGACGGCGACAGAAATTaGAGGCAGCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGDGDRN*RQPQTH
Trigger: ATGTGTCTGTGGCTGCCTGCAATTTCTGTCGCCGTC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGTGCCTAGGAGGCTTGTaGGGCCCCGGGCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRCLGGL*GPGQAL
Trigger: CAGTGCTTGCCCGGGGCCCCACAAGCCTCCTAGGCA...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGAACAGTTTGGTCCTTaGGTAGCCAGGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGEQFGP*VARMGQ
Trigger: CTGTCCCATCCTGGCTACCCAAGGACCAAACTGTTC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTCACAGCAGCCTGGGTTaGTATGTGGGGCCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPHSSLG*YVGPRH
Trigger: ATGCCTTGGCCCCACATACCAACCCAGGCTGCTGTG...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR TCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACCAAACAGGAACTGGTaGGTCTTAACCACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGPNRNW*VLTTLP
Trigger: AGGCAAGGTGGTTAAGACTCACCAGTTCCTGTTTGG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGTGGCTTGCAAGACCTaGGGGTGTCGGCTCATGCCC +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRVACKT*GCRLMP
Trigger: GGGCATGAGCCGACACCCTCAGGTCTTGCAAGCCAC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCCAGCTCCAGCACCATaGCGCTGCAGGGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRPAPAP*RCRVSC
Trigger: ACAGGAGACCCTGCAGCGTCATGGTGCTGGAGCTGG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTAAACTTACTGGTGCCTaGGATGTTGCGGGTGCCACC +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPKLTGA*DVAGAT
Trigger: GGTGGCACCCGCAACATCTCAGGCACCAGTAAGTTT...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGGGCCCTCCTCTCCCTTaGGCAGCCGCACAGATTCTA +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRGPPLP*AAAQIL
Trigger: TAGAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCC...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGCTGGCGCATGTGCTTaGCATTGCGCTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRAGACA*HCAGGL
Trigger: GAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGAGCTTGCTGTTGAGTaGTGCATTGCCCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPELAVE*CIAHPD
Trigger: ATCCGGGTGGGCAATGCAGCACTCAACAGCAAGCTC...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACTGCCTAGGAGGCTTGTaGGGCCCCGGGCAAGCACTG +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDCLGGL*GPGQAL
Trigger: CAGTGCTTGCCCGGGGCCCCACAAGCCTCCTAGGCA...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCCTGTTACGGATACCTTaGATCATGGAAGCATGGTTG +
Preference number: 4 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFLLRIP*IMEAWL
Trigger: CAACCATGCTTCCATGATCCAAGGTATCCGTAACAG...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAAGATGGCACCATCCATaGAGTGGACAGTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGRWHHP*SGQSQR
Trigger: CCTTTGAGACTGTCCACTCCATGGATGGTGCCATCT...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTAGGGCCCCATACTGGTaGGACACATCACACAACTCC +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPRAPYW*DTSHNS
Trigger: GGAGTTGTGTGATGTGTCCCACCAGTATGGGGCCCT...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGTGCTTGACATTGCGCTaGTGGGCTCGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRCLTLR*WARLRA
Trigger: AGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCA...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACTGTCCATGAGTAGCTaGCGCATGTGCTTGACATTG +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGLSMSS*RMCLTL
Trigger: CAATGTCAAGCACATGCGCCAGCTACTCATGGACAG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCCACAGACACATCCTaGAGGGGCAGCCCCACCGCA +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQATDTS*RGSPTA
Trigger: TGCGGTGGGGCTGCCCCTCCAGGATGTGTCTGTGGC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGCCACAGACACATCCTaGAGGGGCAGCCCCACCGCA +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDATDTS*RGSPTA
Trigger: TGCGGTGGGGCTGCCCCTCCAGGATGTGTCTGTGGC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGCCTTAAGGTGGATTTaGGAACAGTTTGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGALRWI*EQFGPW
Trigger: CCAAGGACCAAACTGTTCTCAAATCCACCTTAAGGC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGTGGCTTGCAAGACCTaGGGGTGTCGGCTCATGCCC +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQVACKT*GCRLMP
Trigger: GGGCATGAGCCGACACCCTCAGGTCTTGCAAGCCAC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCACAGAGCTTGCTGTTaGGTGCTGCATTGCCCACCC +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRHRACC*VLHCPP
Trigger: GGGTGGGCAATGCAGCACTCAACAGCAAGCTCTGTG...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGCGCAGGTGGGGTGTaGATCCTAGGCAGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRSAGGV*ILGSWL
Trigger: AAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCT...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCTGAGATGTTGCGGGTaGCACCAGCTCCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRLRCCG*HQLQHH
Trigger: ATGGTGCTGGAGCTGGTGGCACCCGCAACATCTCAG...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGATGGTCAGGGTCATTGTaGCTGAAGACAAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGWSGSL*LKTNLA
Trigger: AGCCAAGTTTGTCTTCAGGCACAATGACCCTGACCA...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCCACCAAGTCACGGGTaGTGGCAATGTAGCCGCCCA +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRPPSHG*WQCSRP
Trigger: TGGGCGGCTACATTGCCAGCACCCGTGACTTGGTGG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGCACCATCCATGGAGTaGACAGTCTCAAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPAPSME*TVSKAT
Trigger: TGTGGCCTTTGAGACTGTCCACTCCATGGATGGTGC...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGCTCGCCTCAGGGCTTaGCCCTCCTCTCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRARLRA*PSSPLS
Trigger: GCTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACATAGATGCCATGCTTaGAGAGCAGGAGATCACAGA +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGHRCHA*RAGDHR
Trigger: TCTGTGATCTCCTGCTCTCCAAGCATGGCATCTATG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGTGGGGCCAAGGCATGTaGGCCCTGTTGCCCTGCACT +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQWGQGM*ALLPCT
Trigger: AGTGCAGGGCAACAGGGCCCACATGCCTTGGCCCCA...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCCTGGGTTGGTATGTaGGGCCAAGGCATGTGGGCC +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQAWVGM*GQGMWA
Trigger: GGCCCACATGCCTTGGCCCCACATACCAACCCAGGC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCCTCTCCCCCTCTCATaGGCTGTCACAGCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQPLPLS*AVTAAW
Trigger: CCAGGCTGCTGTGACAGCCCATGAGAGGGGGAGAGG...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR TCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCCTGTTGCCCTGCACTaGGGACGAACGAATGACAGG +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRPVALH*GRTNDR
Trigger: CCTGTCATTCGTTCGTCCTCAGTGCAGGGCAACAGG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTCCAAACAGGAACTGGTaGGTCTTAACCACCTTGCCT +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPPNRNW*VLTTLP
Trigger: AGGCAAGGTGGTTAAGACTCACCAGTTCCTGTTTGG...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGGAGTTCCGACAGCATaGAGGGACAGTGGCCCTTCG +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDGVPTA*RDSGPS
Trigger: CGAAGGGCCACTGTCCCTTCATGCTGTCGGAACTCC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTTGCTCAAGCTCCACATaGAACTTACTGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPCSSST*NLLVPE
Trigger: CTCAGGCACCAGTAAGTTTCATGTGGAGCTTGAGCA...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGAGAAGAGCAGGGCTaGGTCCTTCTGGTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQGEEQG*VLLVQL
Trigger: GAGCTGCACCAGAAGGACTCAGCCCTGCTCTTCTCC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGCCCTCCTCTCCCTTaGGCAGCCGCACAGATTCTA +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQGPPLP*AAAQIL
Trigger: TAGAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTAAAGTCCTGTTGCCCTaGACTGAGGACGAACGAATG +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPKVLLP*TEDERM
Trigger: CATTCGTTCGTCCTCAGTGCAGGGCAACAGGACTTT...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGTGGTGCCTGAGATGTTaGGGGTGCCACCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQWCLRC*GCHQLQ
Trigger: CTGGAGCTGGTGGCACCCGCAACATCTCAGGCACCA...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTCATGAAACTTACTGGTaGCTGAGATGTTGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPHETYW*LRCCGC
Trigger: GCACCCGCAACATCTCAGGCACCAGTAAGTTTCATG...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGATCATGGAAGCATGGTTaGCTGCGTCTGAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGSWKHG*LRLSKS
Trigger: AGATTTACTCAGACGCAGGCAACCATGCTTCCATGA...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGTAAAGATGAAGCCTaGAGCATAGGAGCGCACCAT +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPGKDEA*SIGAHH
Trigger: ATGGTGCGCTCCTATGCTGCAGGCTTCATCTTTACC...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGAGTAGCTGGCGCATGTaGTTGACATTGCGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRSSWRM*LTLRWW
Trigger: CCACCAGCGCAATGTCAAGCACATGCGCCAGCTACT...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCATGTGGGCCCTGTTaGCCTGCACTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQACGPC*PALRTN
Trigger: GTTCGTCCTCAGTGCAGGGCAACAGGGCCCACATGC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR CCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGGCCCTTCGCCCAAGATaGAGAATCTCCTCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRALRPR*RISSSL
Trigger: AAGGCTGGAGGAGATTCTCCATCTTGGGCGAAGGGC...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCCAAGTCACGGGTGCTaGCAATGTAGCCGCCCACAC +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQPSHGC*QCSRPH
Trigger: GTGTGGGCGGCTACATTGCCAGCACCCGTGACTTGG...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACCCAAGTCACGGGTGCTaGCAATGTAGCCGCCCACAC +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDPSHGC*QCSRPH
Trigger: GTGTGGGCGGCTACATTGCCAGCACCCGTGACTTGG...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACACCCCGGGGGACAGTTaGGTAGTTGATGGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDTPGDS*VVDGLH
Trigger: GTGCAGGCCATCAACTACCCAACTGTCCCCCGGGGT...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGCTGTCACAGCAGCCTaGGTTGGTATGTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRAVTAA*VGMWGQ
Trigger: TTGGCCCCACATACCAACCCAGGCTGCTGTGACAGC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR TCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGACGGACACATCCTTTaGGGCCACAGATGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRDGHIL*GHRCLR
Trigger: TCTGAGGCATCTGTGGCCTCAAAGGATGTGTCCGTC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGAAGGCCCCTGTCCATaGGTAGCTGGCGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRREGPCP*VAGACA
Trigger: AGCACATGCGCCAGCTACTCATGGACAGGGGCCTTC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTCCTTCTGCACAATCTTaGTCTTCCCATCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPPSAQS*SSHPGV
Trigger: AACTCCAGGATGGGAAGAGCAAGATTGTGCAGAAGG...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCTGAGATGTTGCGGGTaGCACCAGCTCCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQLRCCG*HQLQHH
Trigger: ATGGTGCTGGAGCTGGTGGCACCCGCAACATCTCAG...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCATGATGTCAATCTTATaGATAATTCCATCACGCTCC +
Preference number: 4 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFMMSIL*IIPSRS
Trigger: GGAGCGTGATGGAATTATGCATAAGATTGACATCAT...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCTTGCTGTTGAGTGCTaGATTGCCCACCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQLAVEC*IAHPDG
Trigger: CCCATCCGGGTGGGCAATGCAGCACTCAACAGCAAG...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACCTTGCTGTTGAGTGCTaGATTGCCCACCCGGATGGG +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDLAVEC*IAHPDG
Trigger: CCCATCCGGGTGGGCAATGCAGCACTCAACAGCAAG...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGTGGCCTGCACATAGATaGCATGCTTGGAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRWPAHR*HAWRAG
Trigger: TCCTGCTCTCCAAGCATGGCATCTATGTGCAGGCCA...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGTGGGCCCTGTTGCCCTaGACTGAGGACGAACGAATG +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQWALLP*TEDERM
Trigger: CATTCGTTCGTCCTCAGTGCAGGGCAACAGGGCCCA...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR CCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGCCCTTCGCCCAAGATaGAGAATCTCCTCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRALRPR*RISSSL
Trigger: AAGGCTGGAGGAGATTCTCCATCTTGGGCGAAGGGC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGCAGGGTCTCCTGTGTaGCTTGCAAGACCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDAGSPV*LARPEG
Trigger: ACCCTCAGGTCTTGCAAGCCACACAGGAGACCCTGC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGATGCTTGACATTGCGCTaGTGGGCTCGCCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRCLTLR*WARLRA
Trigger: AGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCA...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCAAGTGAAGCGCAGGTaGGGTGTGAATCCTAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRQVKRR*GVNPRQ
Trigger: CTGCCTAGGATTCACACCCCACCTGCGCTTCACTTG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGTGCTCAAGCTCCACATaGAACTTACTGGTGCCTGAG +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRCSSST*NLLVPE
Trigger: CTCAGGCACCAGTAAGTTTCATGTGGAGCTTGAGCA...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACATGGTTGCCTGCGTCTaGGTAAATCTCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDMVACV*VNLAPW
Trigger: CCAGGGTGCGAGATTTACTCAGACGCAGGCAACCAT...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGATGGTTGCCTGCGTCTaGGTAAATCTCGCACCCTGG +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQMVACV*VNLAPW
Trigger: CCAGGGTGCGAGATTTACTCAGACGCAGGCAACCAT...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGGTTCCCACTCACTCATaGGCTCAAAGTGTACAGGAC +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRVPTHS*AQSVQD
Trigger: GTCCTGTACACTTTGAGCTCATGAGTGAGTGGGAAC...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACTCAGGCATAGGTGGTaGCATACTGGGGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRLRHRW*HTGAPC
Trigger: ACATGGGGCCCCAGTATGTCACCACCTATGCCTGAG...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGTCTGAATCAGGTGTGTaGCCTTCCCAGAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRSESGV*PSQRSA
Trigger: AGCAGATCTCTGGGAAGGTCACACACCTGATTCAGA...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR GCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGTCTGGGGCTGCCTTCTaGACAATCTTGCTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRSGAAF*TILLFP
Trigger: TGGGAAGAGCAAGATTGTGCAGAAGGCAGCCCCAGA...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCTGGACTTCTGGGGCTaGCTTCTGCACAATCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRLDFWG*LLHNLA
Trigger: AGCAAGATTGTGCAGAAGGCAGCCCCAGAAGTCCAG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGTGGCCTGCACATAGATaGCATGCTTGGAGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRWPAHR*HAWRAG
Trigger: TCCTGCTCTCCAAGCATGGCATCTATGTGCAGGCCA...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCCAGAGATCTGCTCCTaGTCCTGGGGACCGGAAAAT +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQPEICS*SWGPEN
Trigger: ATTTTCCGGTCCCCAGGAGCAGGAGCAGATCTCTGG...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR CCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGTTGCTCTTCCCATCCTaGAGTTCCGACAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRLLFPS*SSDSMK
Trigger: CTTCATGCTGTCGGAACTCCAGGATGGGAAGAGCAA...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTCTGTTACGGATACCTTaGATCATGGAAGCATGGTTG +
Preference number: 4 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPLLRIP*IMEAWL
Trigger: CAACCATGCTTCCATGATCCAAGGTATCCGTAACAG...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACCTCGAGGGGACAGATaGCACCATCCATGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRPRGDR*HHPWSG
Trigger: TCCACTCCATGGATGGTGCCATCTGTCCCCTCGAGG...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGCCCCATACTGGTaGGACACATCACACAACTCC +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDRAPYW*DTSHNS
Trigger: GGAGTTGTGTGATGTGTCCCACCAGTATGGGGCCCT...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGACGGACACATCCTTTaGGGCCACAGATGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRDGHIL*GHRCLR
Trigger: TCTGAGGCATCTGTGGCCTCAAAGGATGTGTCCGTC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGGACAGTTGGGTAGTTaGTGGCCTGCACATAGATGC +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDGQLGS*WPAHRC
Trigger: GCATCTATGTGCAGGCCATCAACTACCCAACTGTCC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCAGGCATATTGTTCTaGATCAGGTGTGTGACCTTC +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRPGILF*IRCVTF
Trigger: GAAGGTCACACACCTGATTCAGAACAATATGCCTGG...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR GCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAACCTAAAGTCCTGTTaGCCTGCACTGAGGACGAAC +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRNLKSC*PALRTN
Trigger: GTTCGTCCTCAGTGCAGGGCAACAGGACTTTAGGTT...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR GCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACCTGGACTTCTGGGGCTaGCTTCTGCACAATCTTGCT +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDLDFWG*LLHNLA
Trigger: AGCAAGATTGTGCAGAAGGCAGCCCCAGAAGTCCAG...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGAGGGTGTCGGCTCATaGCCAGGTAATCATTACTAC +
Preference number: 4 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDREGVGS*PGNHYY
Trigger: GTAGTAATGATTACCTGGGCATGAGCCGACACCCTC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAAGTAGCTGGCGCATGTaGTTGACATTGCGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRSSWRM*LTLRWW
Trigger: CCACCAGCGCAATGTCAAGCACATGCGCCAGCTACT...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGAGCTTGCTGTTGAGTaGTGCATTGCCCACCCGGAT +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRELAVE*CIAHPD
Trigger: ATCCGGGTGGGCAATGCAGCACTCAACAGCAAGCTC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAAGCATGAAGGGACAGTaGCCCTTCGCCCAAGATGGA +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRSMKGQ*PFAQDG
Trigger: TCCATCTTGGGCGAAGGGCCACTGTCCCTTCATGCT...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGTAAATCTCGCACCCTaGCAGGATCTTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDVNLAP*QDLGQG
Trigger: ACCTTGGCCAAGATCCTGCCAGGGTGCGAGATTTAC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGTAAATCTCGCACCCTaGCAGGATCTTGGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQVNLAP*QDLGQG
Trigger: ACCTTGGCCAAGATCCTGCCAGGGTGCGAGATTTAC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCACCATCCATGGAGTaGACAGTCTCAAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQAPSME*TVSKAT
Trigger: TGTGGCCTTTGAGACTGTCCACTCCATGGATGGTGC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCATAGATGCCATGCTTaGAGAGCAGGAGATCACAGA +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRHRCHA*RAGDHR
Trigger: TCTGTGATCTCCTGCTCTCCAAGCATGGCATCTATG...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGTCATTGTGCCTaGAGACAAACTTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRQGHCA*RQTWLL
Trigger: GAGCAGCCAAGTTTGTCTTCAGGCACAATGACCCTG...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGGACAGTTGGGTAGTTaGTGGCCTGCACATAGATGC +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRGQLGS*WPAHRC
Trigger: GCATCTATGTGCAGGCCATCAACTACCCAACTGTCC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGATTGGGCAAAGGGATATaGATCAGCCCAGCGGTTCAC +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRLGKGI*ISPAVH
Trigger: GTGAACCGCTGGGCTGATGCATATCCCTTTGCCCAA...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGGGTGTCGGCTCATaGCCAGGTAATCATTACTAC +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQEGVGS*PGNHYY
Trigger: GTAGTAATGATTACCTGGGCATGAGCCGACACCCTC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCATGAAACTTACTGGTaGCTGAGATGTTGCGGGTGC +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQHETYW*LRCCGC
Trigger: GCACCCGCAACATCTCAGGCACCAGTAAGTTTCATG...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGGTAAAGATGAAGCCTaGAGCATAGGAGCGCACCAT +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDGKDEA*SIGAHH
Trigger: ATGGTGCGCTCCTATGCTGCAGGCTTCATCTTTACC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGACGGCGACAGAAATTaGAGGCAGCCACAGACACAT +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRDGDRN*RQPQTH
Trigger: ATGTGTCTGTGGCTGCCTGCAATTTCTGTCGCCGTC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGAACAGTTTGGTCCTTaGGTAGCCAGGATGGGACAG +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRREQFGP*VARMGQ
Trigger: CTGTCCCATCCTGGCTACCCAAGGACCAAACTGTTC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCTGTTACGGATACCTTaGATCATGGAAGCATGGTTG +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRLLRIP*IMEAWL
Trigger: CAACCATGCTTCCATGATCCAAGGTATCCGTAACAG...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGAGATGGCACCATCCATaGAGTGGACAGTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQRWHHP*SGQSQR
Trigger: CCTTTGAGACTGTCCACTCCATGGATGGTGCCATCT...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCTGTCCATGAGTAGCTaGCGCATGTGCTTGACATTG +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQLSMSS*RMCLTL
Trigger: CAATGTCAAGCACATGCGCCAGCTACTCATGGACAG...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGTTCCCACTCACTCATaGGCTCAAAGTGTACAGGAC +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRVPTHS*AQSVQD
Trigger: GTCCTGTACACTTTGAGCTCATGAGTGAGTGGGAAC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCCTTCTGCACAATCTTaGTCTTCCCATCCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQPSAQS*SSHPGV
Trigger: AACTCCAGGATGGGAAGAGCAAGATTGTGCAGAAGG...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGAAGACAAACTTGGCTaGTCCACTGTTACGGATACC +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDEDKLG*STVTDT
Trigger: GGTATCCGTAACAGTGGAGCAGCCAAGTTTGTCTTC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGTGGTCAGGGTCATTGTaGCTGAAGACAAACTTGGCT +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQWSGSL*LKTNLA
Trigger: AGCCAAGTTTGTCTTCAGGCACAATGACCCTGACCA...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGATTGCTCTTCCCATCCTaGAGTTCCGACAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRLLFPS*SSDSMK
Trigger: CTTCATGCTGTCGGAACTCCAGGATGGGAAGAGCAA...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACTCATGGAAGCATGGTTaGCTGCGTCTGAGTAAATCT +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDSWKHG*LRLSKS
Trigger: AGATTTACTCAGACGCAGGCAACCATGCTTCCATGA...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAGAAGACAAACTTGGCTaGTCCACTGTTACGGATACC +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRREDKLG*STVTDT
Trigger: GGTATCCGTAACAGTGGAGCAGCCAAGTTTGTCTTC...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGATTTGAGAACAGTTTaGTCCTTGGGTAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDDLRTV*SLGSQD
Trigger: ATCCTGGCTACCCAAGGACCAAACTGTTCTCAAATC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCCTCAGAGAAATGTTaGGCAAAGGGATATGCATCA +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQASEKC*AKGYAS
Trigger: TGATGCATATCCCTTTGCCCAACATTTCTCTGAGGC...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CCA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGCCTCAGAGAAATGTTaGGCAAAGGGATATGCATCA +
Preference number: 4 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDASEKC*AKGYAS
Trigger: TGATGCATATCCCTTTGCCCAACATTTCTCTGAGGC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR GCA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGATGATGTCAATCTTATaGATAATTCCATCACGCTCC +
Preference number: 4 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRMMSIL*IIPSRS
Trigger: GGAGCGTGATGGAATTATGCATAAGATTGACATCAT...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR TCA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGAAAACTGGTCATAACTaGAGACATAGTTTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQKTGHN*RHSFQA
Trigger: TGCCTGGAAACTATGTCTTCAGTTATGACCAGTTTT...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR GCA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAATGATGTCAATCTTATaGATAATTCCATCACGCTCC +
Preference number: 4 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRMMSIL*IIPSRS
Trigger: GGAGCGTGATGGAATTATGCATAAGATTGACATCAT...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS CCA 90 bp CCCCTGTCCATGAGTAGCTGGCGCATGTGCTTGACATTGCGCTGGTaGGCTCGCCTCAGGGCTTGGCCCTCCTCTCCCTTGAGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: PLSMSSWRMCLTLRW*ARLRAWPSSPLSSR
Trigger: GCGGCTGCTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCTACTCATGGACAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CCA 90 bp AGGCCCCTGTCCATGAGTAGCTGGCGCATGTGCTTGACATTGCGCTaGTGGGCTCGCCTCAGGGCTTGGCCCTCCTCTCCCTTGAGCAGC +
Preference number: 5 (lower is better)
Translates to: RPLSMSSWRMCLTLR*WARLRAWPSSPLSS
Trigger: GCTGCTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCTACTCATGGACAGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CCA 90 bp ATCCCAGAGCAACCTCTCCCCCTCTCATGGGCTGTCACAGCAGCCTaGGTTGGTATGTGGGGCCAAGGCATGTGGGCCCTGTTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: IPEQPLPLSWAVTAA*VGMWGQGMWALLPC
Trigger: GCAGGGCAACAGGGCCCACATGCCTTGGCCCCACATACCAACCCAGGCTGCTGTGACAGCCCATGAGAGGGGGAGAGGTTGCTCTGGGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000644983.1
CDS CCA 90 bp TGGCGCATGTGCTTGACATTGCGCTGGTGGGCTCGCCTCAGGGCTTaGCCCTCCTCTCCCTTGAGCAGCCGCACAGATTCTAGAGCTCCA +
Preference number: 5 (lower is better)
Translates to: WRMCLTLRWWARLRA*PSSPLSSRTDSRAP
Trigger: TGGAGCTCTAGAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CCA 90 bp TGTACAGGACGGCGACAGAAATTGCAGGCAGCCACAGACACATCCTaGAGGGGCAGCCCCACCGCAGTCCAAGCCAGCAGCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CTGRRQKLQAATDTS*RGSPTAVQASSSFS
Trigger: GGAGAAGCTGCTGCTGGCTTGGACTGCGGTGGGGCTGCCCCTCCAGGATGTGTCTGTGGCTGCCTGCAATTTCTGTCGCCGTCCTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS-3UTR CAA 90 bp GGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAGGCTCGCCTCAGGGCTaGGCCCTCCTCTCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: GFSGIGGDILGPHVPEVGGSPQG*ALLSLE
Trigger: CTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCC...TCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTACGCATGTGCTTGACATaGCGCTGGTGGGCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVRMCLT*RWWARL
Trigger: GAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCG...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACCTTGCCTAGGAGGCTaGTGGGGCCCCGGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGPCLGG*WGPGQA
Trigger: TGCTTGCCCGGGGCCCCACAAGCCTCCTAGGCAAGG...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAAGCTGGCGCATGTGCTaGACATTGCGCTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVSWRMC*TLRWWA
Trigger: AGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCT...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp GCAGCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGGACGGCGACAGAAATaGCAGGCAGCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: AAGFSGIGGDILGPHVPEGRRQK*QAATDT
Trigger: TGTGTCTGTGGCTGCCTGCAATTTCTGTCGCCGTCC...TTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS TCA 90 bp GAGTCCTTCTGGTGCAGCTCAGCCAGCTCCTGCTCAAGCTCCACATaGAACTTACTGGTGCCTGAGATGTTGCGGGTGCCACCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: ESFWCSSASSCSSST*NLLVPEMLRVPPAP
Trigger: TGGAGCTGGTGGCACCCGCAACATCTCAGGCACCAGTAAGTTTCATGTGGAGCTTGAGCAGGAGCTGGCTGAGCTGCACCAGAAGGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000463868.5
ENST00000477869.6
ENST00000650242.1
CDS-3UTR CAA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCTGGCCCTCCTCTCCCTaGAGCAGCCGCACAGATTCT +
Preference number: 5 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFWPSSP*SSRTDS
Trigger: AGAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCCA...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS TCA 90 bp CCTTCTGCACAATCTTGCTCTTCCCATCCTGGAGTTCCGACAGCATaGAGGGACAGTGGCCCTTCGCCCAAGATGGAGAATCTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PSAQSCSSHPGVPTA*RDSGPSPKMENLLQ
Trigger: CTGGAGGAGATTCTCCATCTTGGGCGAAGGGCCACTGTCCCTTCATGCTGTCGGAACTCCAGGATGGGAAGAGCAAGATTGTGCAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000463868.5
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS TCA 90 bp ACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCCCACTCACTCATaGGCTCAAAGTGTACAGGACGGCGACAGAAATTGCAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TGAPCSRSRNVPTHS*AQSVQDGDRNCRQP
Trigger: TGGCTGCCTGCAATTTCTGTCGCCGTCCTGTACACTTTGAGCTCATGAGTGAGTGGGAACGTTCCTACTTCGGGAACATGGGGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS GCA 90 bp GCAGGGTCTCCTGTGTGGCTTGCAAGACCTGAGGGTGTCGGCTCATaGCCAGGTAATCATTACTACACCAGACGGACACATCCTTTGAGG +
Preference number: 5 (lower is better)
Translates to: AGSPVWLARPEGVGS*PGNHYYTRRTHPLR
Trigger: CCTCAAAGGATGTGTCCGTCTGGTGTAGTAATGATTACCTGGGCATGAGCCGACACCCTCAGGTCTTGCAAGCCACACAGGAGACCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000477869.6
ENST00000650242.1
CDS CCA 90 bp ATCTTGCTCTTCCCATCCTGGAGTTCCGACAGCATGAAGGGACAGTaGCCCTTCGCCCAAGATGGAGAATCTCCTCCAGCCTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: ILLFPSWSSDSMKGQ*PFAQDGESPPAFVA
Trigger: GGCAACAAAGGCTGGAGGAGATTCTCCATCTTGGGCGAAGGGCCACTGTCCCTTCATGCTGTCGGAACTCCAGGATGGGAAGAGCAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000463868.5
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS-3UTR CAA 90 bp GCCTGGACCCAAGTGAAGCGCAGGTGGGGTGTGAATCCTAGGCAGCTGGCTTCTAAGAGAGTAGAGTCATaGGCAACAAAGCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: AWTQVKRRWGVNPRQLASKRVES*ATKQEE
Trigger: CTCCTCCTGCTTTGTTGCCAATGACTCTACTCTCTT...AGAAGCCAGCTGCCTAGGATTCACACCCCACCTGCGCTTCACTTGGGTCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp TTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGCACCCTGGCAGGATCTaGGCCAAGGTGAAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: FSGIGGDILGPHVPEVGTHPGRI*AKVKRV
Trigger: TACTCTCTTCACCTTGGCCAAGATCCTGCCAGGGTG...CGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp GCTGGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTATGCCTGAAGACAAACTaGGCTGCTCCACTGTTACGG +
Preference number: 5 (lower is better)
Translates to: AGFSGIGGDILGPHVPEVCLKTN*AAPLLR
Trigger: CCGTAACAGTGGAGCAGCCAAGTTTGTCTTCAGGCA...TACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp GGCTTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACACAGCCAAAGGCCTaGCCAAGAGTTCCAGAGATG +
Preference number: 5 (lower is better)
Translates to: GFSGIGGDILGPHVPEVGTQPKA*PRVPEM
Trigger: CATCTCTGGAACTCTTGGCAAGGCCTTTGGCTGTGT...TCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTCGCATGTGCTTGACATaGCGCTGGTGGGCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPRMCLT*RWWARL
Trigger: GAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCG...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGGACGGCGACAGAAATaGCAGGCAGCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGGRRQK*QAATDT
Trigger: TGTGTCTGTGGCTGCCTGCAATTTCTGTCGCCGTCC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCCTTGCCTAGGAGGCTaGTGGGGCCCCGGGCAAGCA +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRPCLGG*WGPGQA
Trigger: TGCTTGCCCGGGGCCCCACAAGCCTCCTAGGCAAGG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCAGGTGGTCAGGGTCATaGTGCCTGAAGACAAACTTG +
Preference number: 5 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFRWSGS*CLKTNL
Trigger: CAAGTTTGTCTTCAGGCACAATGACCCTGACCACCT...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGGCTCGCCTCAGGGCTaGGCCCTCCTCTCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRGSPQG*ALLSLE
Trigger: CTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS CCA 90 bp CAGACGGACACATCCTTTGAGGCCACAGATGCCTCAGAGAAATGTTaGGCAAAGGGATATGCATCAGCCCAGCGGTTCACAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: QTDTSFEATDASEKC*AKGYASAQRFTVLN
Trigger: GTTCAAGACTGTGAACCGCTGGGCTGATGCATATCCCTTTGCCCAACATTTCTCTGAGGCATCTGTGGCCTCAAAGGATGTGTCCGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000477869.6
ENST00000650242.1
CDS CCA 90 bp GCTAGGCAGATCTGTCTTGAAAGCCTTCACATCTTCCTGGACTTCTaGGGCTGCCTTCTGCACAATCTTGCTCTTCCCATCCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: ARQICLESLHIFLDF*GCLLHNLALPILEF
Trigger: GAACTCCAGGATGGGAAGAGCAAGATTGTGCAGAAGGCAGCCCCAGAAGTCCAGGAAGATGTGAAGGCTTTCAAGACAGATCTGCCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000455688.2
ENST00000644983.1
ENST00000650242.1
CDS-3UTR CAA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGCCTTCTGCACAATCTaGCTCTTCCCATCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGAFCTI*LFPSWS
Trigger: ACTCCAGGATGGGAAGAGCAAGATTGTGCAGAAGGC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGATGCCTGAAGACAAACTaGGCTGCTCCACTGTTACGG +
Preference number: 5 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGCLKTN*AAPLLR
Trigger: CCGTAACAGTGGAGCAGCCAAGTTTGTCTTCAGGCA...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGGCTCGCCTCAGGGCTaGGCCCTCCTCTCCCTTGAG +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDGSPQG*ALLSLE
Trigger: CTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGACGGCGACAGAAATaGCAGGCAGCCACAGACACA +
Preference number: 5 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPGRRQK*QAATDT
Trigger: TGTGTCTGTGGCTGCCTGCAATTTCTGTCGCCGTCC...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS TCA 90 bp CAAGATGGAGAATCTCCTCCAGCCTTTGTTGCCTTAAGGTGGATTTaGGAACAGTTTGGTCCTTGGGTAGCCAGGATGGGACAGCGTCCA +
Preference number: 5 (lower is better)
Translates to: QDGESPPAFVALRWI*EQFGPWVARMGQRP
Trigger: TGGACGCTGTCCCATCCTGGCTACCCAAGGACCAAACTGTTCTCAAATCCACCTTAAGGCAACAAAGGCTGGAGGAGATTCTCCATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000463868.5
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCTGGTGCCTGAGATGTaGCGGGTGCCACCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRLVPEM*RVPPAP
Trigger: TGGAGCTGGTGGCACCCGCAACATCTCAGGCACCAG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TTCTCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGACTGTTACGGATACCTaGGATCATGGAAGCATGGTT +
Preference number: 5 (lower is better)
Translates to: FSGIGGDILGPHVPEVGTTVTDT*DHGSMV
Trigger: AACCATGCTTCCATGATCCAAGGTATCCGTAACAGT...CGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAAGGTGGTCAGGGTCATaGTGCCTGAAGACAAACTTG +
Preference number: 5 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGRWSGS*CLKTNL
Trigger: CAAGTTTGTCTTCAGGCACAATGACCCTGACCACCT...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGAGCTGGCGCATGTGCTaGACATTGCGCTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRSWRMC*TLRWWA
Trigger: AGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCT...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTTCACAGAGCTTGCTGTaGAGTGCTGCATTGCCCACC +
Preference number: 5 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPSQSLL*SAALPT
Trigger: GGTGGGCAATGCAGCACTCAACAGCAAGCTCTGTGA...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGGCATGTGGGCCCTGTaGCCCTGCACTGAGGACGAA +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRGMWAL*PCTEDE
Trigger: TTCGTCCTCAGTGCAGGGCAACAGGGCCCACATGCC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS TCA 90 bp GCTCATGCCCAGGTAATCATTACTACACCAGACGGACACATCCTTTaGGGCCACAGATGCCTCAGAGAAATGTTGGGCAAAGGGATATGC +
Preference number: 5 (lower is better)
Translates to: AHAQVIITTPDGHIL*GHRCLREMLGKGIC
Trigger: GCATATCCCTTTGCCCAACATTTCTCTGAGGCATCTGTGGCCTCAAAGGATGTGTCCGTCTGGTGTAGTAATGATTACCTGGGCATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000477869.6
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGGGTCTCCTGTGTGGCTaGCAAGACCTGAGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRGLLCG*QDLRVS
Trigger: CGACACCCTCAGGTCTTGCAAGCCACACAGGAGACC...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACCTGGTGCCTGAGATGTaGCGGGTGCCACCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDLVPEM*RVPPAP
Trigger: TGGAGCTGGTGGCACCCGCAACATCTCAGGCACCAG...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTTGCCTGAAGACAAACTaGGCTGCTCCACTGTTACGG +
Preference number: 5 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPCLKTN*AAPLLR
Trigger: CCGTAACAGTGGAGCAGCCAAGTTTGTCTTCAGGCA...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TCAGGCATAGGTGGTGACATACTGGGGCCCCATGTTCCCGAAGTAGGAACGTTCTCAAAGGCCACAATTTaGGGTATCTTAGGGTTAGAC +
Preference number: 5 (lower is better)
Translates to: SGIGGDILGPHVPEVGTFSKATI*GILGLD
Trigger: GTCTAACCCTAAGATACCCAAAATTGTGGCCTTTGA...GAACGTTCCTACTTCGGGAACATGGGGCCCCAGTATGTCACCACCTATGCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498636.1
CDS-3UTR CAA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTACACAGCCAAAGGCCTaGCCAAGAGTTCCAGAGATG +
Preference number: 5 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPTQPKA*PRVPEM
Trigger: CATCTCTGGAACTCTTGGCAAGGCCTTTGGCTGTGT...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGTGGCCCTCCTCTCCCTaGAGCAGCCGCACAGATTCT +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRWPSSP*SSRTDS
Trigger: AGAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCCA...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACCGCATGTGCTTGACATaGCGCTGGTGGGCTCGCCTC +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDRMCLT*RWWARL
Trigger: GAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCG...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCTGTTGAGTGCTGCATaGCCCACCCGGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRLLSAA*PTRMGM
Trigger: CATCCCCATCCGGGTGGGCAATGCAGCACTCAACAG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTGGAGCTGCAGTCACCATCTaGAACCTAAAGTCCTCACAA +
Preference number: 5 (lower is better)
Translates to: GSIQLEAHNKAEDRSRPGAAVTI*NLKSSQ
Trigger: TTGTGAGGACTTTAGGTTCAAGATGGTGACTGCAGC...TCCAGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGGTCTCCTGTGTGGCTaGCAAGACCTGAGGGTGTCG +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDGLLCG*QDLRVS
Trigger: CGACACCCTCAGGTCTTGCAAGCCACACAGGAGACC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGTGGCCCTCCTCTCCCTaGAGCAGCCGCACAGATTCT +
Preference number: 5 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQWPSSP*SSRTDS
Trigger: AGAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCCA...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGCTGGCGCATGTGCTaGACATTGCGCTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDSWRMC*TLRWWA
Trigger: AGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCT...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACCTGTTGAGTGCTGCATaGCCCACCCGGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDLLSAA*PTRMGM
Trigger: CATCCCCATCCGGGTGGGCAATGCAGCACTCAACAG...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGCCTAGGAGATCACAGAGCTaGCTGTTGAGTGCTGCATTG +
Preference number: 5 (lower is better)
Translates to: LGSIQLEAHNKAEDRSRPRRSQS*LLSAAL
Trigger: CAATGCAGCACTCAACAGCAAGCTCTGTGATCTCCT...AGGCCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS GCA 90 bp GGGTTAGACTTCTCTAGAAGTTTCTTTAGGTGGTCAGGGTCATTGTaGCTGAAGACAAACTTGGCTGCTCCACTGTTACGGATACCTTGG +
Preference number: 5 (lower is better)
Translates to: GLDFSRSFFRWSGSL*LKTNLAAPLLRIPW
Trigger: CCAAGGTATCCGTAACAGTGGAGCAGCCAAGTTTGTCTTCAGGCACAATGACCCTGACCACCTAAAGAAACTTCTAGAGAAGTCTAACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS-3UTR CAA 90 bp TTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGAGTAGGGCCTTCTGCACAATCTaGCTCTTCCCATCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: FLGSIQLEAHNKAEDRSRAFCTI*LFPSWS
Trigger: ACTCCAGGATGGGAAGAGCAAGATTGTGCAGAAGGC...CCTACTCCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGCACCCTGGCAGGATCTaGGCCAAGGTGAAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRHPGRI*AKVKRV
Trigger: TACTCTCTTCACCTTGGCCAAGATCCTGCCAGGGTG...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACCACCCTGGCAGGATCTaGGCCAAGGTGAAGAGAGTA +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDHPGRI*AKVKRV
Trigger: TACTCTCTTCACCTTGGCCAAGATCCTGCCAGGGTG...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGACACAGCCAAAGGCCTaGCCAAGAGTTCCAGAGATG +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRTQPKA*PRVPEM
Trigger: CATCTCTGGAACTCTTGGCAAGGCCTTTGGCTGTGT...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACTCACAGAGCTTGCTGTaGAGTGCTGCATTGCCCACC +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDSQSLL*SAALPT
Trigger: GGTGGGCAATGCAGCACTCAACAGCAAGCTCTGTGA...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGAACCTAAAGTCCTGTaGCCCTGCACTGAGGACGAA +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDEPKVL*PCTEDE
Trigger: TTCGTCCTCAGTGCAGGGCAACAGGACTTTAGGTTC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR CAA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGAGAACAGTTTGGTCCTaGGGTAGCCAGGATGGGACA +
Preference number: 5 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQRTVWS*GSQDGT
Trigger: TGTCCCATCCTGGCTACCCAAGGACCAAACTGTTCT...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACGCTGCAGTCACCATCTaGAACCTAAAGTCCTGTTGC +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDAAVTI*NLKSCC
Trigger: GCAACAGGACTTTAGGTTCAAGATGGTGACTGCAGC...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGTGGTCAGGGTCATaGTGCCTGAAGACAAACTTG +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDRWSGS*CLKTNL
Trigger: CAAGTTTGTCTTCAGGCACAATGACCCTGACCACCT...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGTGCCTTAAGGTGGATTaGAGAACAGTTTGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRCLKVD*RTVWSL
Trigger: CAAGGACCAAACTGTTCTCAAATCCACCTTAAGGCA...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGAAGAGAGTAGAGTCATaGGCAACAAAGCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQKRVES*ATKQEE
Trigger: CTCCTCCTGCTTTGTTGCCAATGACTCTACTCTCTT...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp GCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGGACTGTTACGGATACCTaGGATCATGGAAGCATGGTT +
Preference number: 5 (lower is better)
Translates to: ALFLGSIQLEAHNKAEDRTVTDT*DHGSMV
Trigger: AACCATGCTTCCATGATCCAAGGTATCCGTAACAGT...CCTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAAGGAGATCACAGAGCTaGCTGTTGAGTGCTGCATTG +
Preference number: 5 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRRRSQS*LLSAAL
Trigger: CAATGCAGCACTCAACAGCAAGCTCTGTGATCTCCT...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACTGCCTTAAGGTGGATTaGAGAACAGTTTGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDCLKVD*RTVWSL
Trigger: CAAGGACCAAACTGTTCTCAAATCCACCTTAAGGCA...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TTGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGAAAGAGAGTAGAGTCATaGGCAACAAAGCAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LCFIFRLNSARGTQQSRRKRVES*ATKQEE
Trigger: CTCCTCCTGCTTTGTTGCCAATGACTCTACTCTCTT...TCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACACTGTTACGGATACCTaGGATCATGGAAGCATGGTT +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDTVTDT*DHGSMV
Trigger: AACCATGCTTCCATGATCCAAGGTATCCGTAACAGT...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAACAACCTCTTTTTCTaGTTCCATCCCAGAGCAACC +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDNNLFF*FHPRAT
Trigger: GGTTGCTCTGGGATGGAACAAGAAAAAGAGGTTGTT...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396198.7
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACTTCTTCTCCATGATCTaGTCCCTGAAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDFFSMI*SLKNWS
Trigger: TGACCAGTTTTTCAGGGACAAGATCATGGAGAAGAA...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACAGTTCTTCTCCATGATCTaGTCCCTGAAAAACTGGTCA +
Preference number: 5 (lower is better)
Translates to: CFIFRLNSARGTQQSRRQFFSMI*SLKNWS
Trigger: TGACCAGTTTTTCAGGGACAAGATCATGGAGAAGAA...CTGTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS-3UTR CAA 90 bp TGTGCTTTATTTTTAGGCTCAATTCAGCTAGAGGCACACAACAAAGCAGAAGACTCAAAGGCCACAATTTaGGGTATCTTAGGGTTAGAC +
Preference number: 5 (lower is better)
Translates to: CALFLGSIQLEAHNKAEDSKATI*GILGLD
Trigger: GTCTAACCCTAAGATACCCAAAATTGTGGCCTTTGA...GTCTTCTGCTTTGTTGTGTGCCTCTAGCTGAATTGAGCCTAAAAATAAAGCACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000650242.1
CDS CCA 72 bp CGGCGACAGAAATTGCAGGCAGCCACAGACACATCCTaGAGGGGCAGCCCCACCGCAGTCCAAGCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRQKLQAATDTS*RGSPTAVQASS
Trigger: GCTGCTGGCTTGGACTGCGGTGGGGCTGCCCCTCCAGGATGTGTCTGTGGCTGCCTGCAATTTCTGTCGCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CCA 72 bp TCCATGAGTAGCTGGCGCATGTGCTTGACATTGCGCTaGTGGGCTCGCCTCAGGGCTTGGCCCTCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: SMSSWRMCLTLR*WARLRAWPSSP
Trigger: GGGAGAGGAGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCTACTCATGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CCA 72 bp TCTCCCCCTCTCATGGGCTGTCACAGCAGCCTGGGTTaGTATGTGGGGCCAAGGCATGTGGGCCCTGTTGCC +
Preference number: 6 (lower is better)
Translates to: SPPLMGCHSSLG*YVGPRHVGPVA
Trigger: GGCAACAGGGCCCACATGCCTTGGCCCCACATACCAACCCAGGCTGCTGTGACAGCCCATGAGAGGGGGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000644983.1
CDS CCA 72 bp CAACCTCTCCCCCTCTCATGGGCTGTCACAGCAGCCTaGGTTGGTATGTGGGGCCAAGGCATGTGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: QPLPLSWAVTAA*VGMWGQGMWAL
Trigger: CAGGGCCCACATGCCTTGGCCCCACATACCAACCCAGGCTGCTGTGACAGCCCATGAGAGGGGGAGAGGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000644983.1
CDS CAA 72 bp GTGCTTGACATTGCGCTGGTGGGCTCGCCTCAGGGCTaGGCCCTCCTCTCCCTTGAGCAGCCGCACAGATTC +
Preference number: 6 (lower is better)
Translates to: VLDIALVGSPQG*ALLSLEQPHRF
Trigger: GAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 72 bp GGAAGGCCCCTGTCCATGAGTAGCTGGCGCATGTGCTaGACATTGCGCTGGTGGGCTCGCCTCAGGGCTTGG +
Preference number: 6 (lower is better)
Translates to: GRPLSMSSWRMC*TLRWWARLRAW
Trigger: CCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCTACTCATGGACAGGGGCCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 90 bp ACAGGAAGGCCCCTGTCCATGAGTAGCTGGCGCATGTGCTTGACATaGCGCTGGTGGGCTCGCCTCAGGGCTTGGCCCTCCTCTCCCTTG +
Preference number: 6 (lower is better)
Translates to: TGRPLSMSSWRMCLT*RWWARLRAWPSSPL
Trigger: CAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCACATGCGCCAGCTACTCATGGACAGGGGCCTTCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 90 bp CAGAGCAACCTCTCCCCCTCTCATGGGCTGTCACAGCAGCCTGGGTaGGTATGTGGGGCCAAGGCATGTGGGCCCTGTTGCCCTGCACTG +
Preference number: 6 (lower is better)
Translates to: QSNLSPSHGLSQQPG*VCGAKACGPCCPAL
Trigger: CAGTGCAGGGCAACAGGGCCCACATGCCTTGGCCCCACATACCAACCCAGGCTGCTGTGACAGCCCATGAGAGGGGGAGAGGTTGCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000644983.1
CDS TCA 72 bp CCTGAGATGTTGCGGGTGCCACCAGCTCCAGCACCATaGCGCTGCAGGGTCTCCTGTGTGGCTTGCAAGACC +
Preference number: 6 (lower is better)
Translates to: PEMLRVPPAPAP*RCRVSCVACKT
Trigger: GGTCTTGCAAGCCACACAGGAGACCCTGCAGCGTCATGGTGCTGGAGCTGGTGGCACCCGCAACATCTCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000477869.6
ENST00000650242.1
CDS CCA 72 bp TGCTTGACATTGCGCTGGTGGGCTCGCCTCAGGGCTTaGCCCTCCTCTCCCTTGAGCAGCCGCACAGATTCT +
Preference number: 6 (lower is better)
Translates to: CLTLRWWARLRA*PSSPLSSRTDS
Trigger: AGAATCTGTGCGGCTGCTCAAGGGAGAGGAGGGCCAAGCCCTGAGGCGAGCCCACCAGCGCAATGTCAAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CCA 72 bp CTCTCATGGGCTGTCACAGCAGCCTGGGTTGGTATGTaGGGCCAAGGCATGTGGGCCCTGTTGCCCTGCACT +
Preference number: 6 (lower is better)
Translates to: LSWAVTAAWVGM*GQGMWALLPCT
Trigger: AGTGCAGGGCAACAGGGCCCACATGCCTTGGCCCCACATACCAACCCAGGCTGCTGTGACAGCCCATGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000644983.1
CDS GCA 72 bp CAGCATAGGAGCGCACCATGTCCACCAAGTCACGGGTaGTGGCAATGTAGCCGCCCACACAGCCAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: QHRSAPCPPSHG*WQCSRPHSQRP
Trigger: AGGCCTTTGGCTGTGTGGGCGGCTACATTGCCAGCACCCGTGACTTGGTGGACATGGTGCGCTCCTATGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS GCA 72 bp AATCTCGCACCCTGGCAGGATTGGTGCCTGAGATGTTaGGGGTGCCACCAGCTCCAGCACCATGACGCTGCA +
Preference number: 6 (lower is better)
Translates to: NLAPWQDWCLRC*GCHQLQHHDAA
Trigger: TGCAGCGTCATGGTGCTGGAGCTGGTGGCACCCGCAACATCTCAGGCACCAATCCTGCCAGGGTGCGAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493869.2
CDS CCA 72 bp CATAGGAGCGCACCATGTCCACCAAGTCACGGGTGCTaGCAATGTAGCCGCCCACACAGCCAAAGGCCTTGC +
Preference number: 6 (lower is better)
Translates to: HRSAPCPPSHGC*QCSRPHSQRPC
Trigger: GCAAGGCCTTTGGCTGTGTGGGCGGCTACATTGCCAGCACCCGTGACTTGGTGGACATGGTGCGCTCCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CCA 72 bp TCTTGTTCCATCCCAGAGCAACCTCTCCCCCTCTCATaGGCTGTCACAGCAGCCTGGGTTGGTATGTGGGGC +
Preference number: 6 (lower is better)
Translates to: SCSIPEQPLPLS*AVTAAWVGMWG
Trigger: GCCCCACATACCAACCCAGGCTGCTGTGACAGCCCATGAGAGGGGGAGAGGTTGCTCTGGGATGGAACAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000644983.1
CDS CCA 72 bp TTCCCATCCTGGAGTTCCGACAGCATGAAGGGACAGTaGCCCTTCGCCCAAGATGGAGAATCTCCTCCAGCC +
Preference number: 6 (lower is better)
Translates to: FPSWSSDSMKGQ*PFAQDGESPPA
Trigger: GGCTGGAGGAGATTCTCCATCTTGGGCGAAGGGCCACTGTCCCTTCATGCTGTCGGAACTCCAGGATGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000463868.5
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS CCA 72 bp GGGGCTGCCTTCTGCACAATCTTGCTCTTCCCATCCTaGAGTTCCGACAGCATGAAGGGACAGTGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: GAAFCTILLFPS*SSDSMKGQWPF
Trigger: GAAGGGCCACTGTCCCTTCATGCTGTCGGAACTCCAGGATGGGAAGAGCAAGATTGTGCAGAAGGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000463868.5
ENST00000477869.6
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS CCA 72 bp CAGCCAGCTCCTGCTCAAGCTCCACATGAAACTTACTaGTGCCTGAGATGTTGCGGGTGCCACCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: QPAPAQAPHETY*CLRCCGCHQLQ
Trigger: CTGGAGCTGGTGGCACCCGCAACATCTCAGGCACCAGTAAGTTTCATGTGGAGCTTGAGCAGGAGCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000463868.5
ENST00000477869.6
ENST00000650242.1
CDS GCA 72 bp CTTGGAGAGCAGGAGATCACAGAGCTTGCTGTTGAGTaGTGCATTGCCCACCCGGATGGGGATGATGTGGCT +
Preference number: 6 (lower is better)
Translates to: LGEQEITELAVE*CIAHPDGDDVA
Trigger: AGCCACATCATCCCCATCCGGGTGGGCAATGCAGCACTCAACAGCAAGCTCTGTGATCTCCTGCTCTCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000650242.1
CDS CCA 72 bp TTCCCATCCTGGAGTTCCGACAGCATGAAGGGACAGTaGCCCTTCGCCCAAGATGGAGAATCTGTTGCCCTG +
Preference number: 6 (lower is better)
Translates to: FPSWSSDSMKGQ*PFAQDGESVAL
Trigger: CAGGGCAACAGATTCTCCATCTTGGGCGAAGGGCCACTGTCCCTTCATGCTGTCGGAACTCCAGGATGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000455688.2
ENST00000477869.6
CDS CAA 72 bp GGGCAGCACTGTAGCAGCATGGCTGCAGTCACCATCTaGAACCTAAAGTCCTGTTGCCCTGCACTGAGGACG +
Preference number: 6 (lower is better)
Translates to: GQHCSSMAAVTI*NLKSCCPALRT
Trigger: CGTCCTCAGTGCAGGGCAACAGGACTTTAGGTTCAAGATGGTGACTGCAGCCATGCTGCTACAGTGCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000463868.5
ENST00000493869.2
ENST00000650242.1
CDS CAA 72 bp CCATGCTTGGAGAGCAGGAGATCACAGAGCTTGCTGTaGAGTGCTGCATTGCCCACCCGGATGGGGATGATG +
Preference number: 6 (lower is better)
Translates to: PCLESRRSQSLL*SAALPTRMGMM
Trigger: CATCATCCCCATCCGGGTGGGCAATGCAGCACTCAACAGCAAGCTCTGTGATCTCCTGCTCTCCAAGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000650242.1
CDS TCA 72 bp AGGATGGGACAGCGTCCAATACCAAACAGGAACTGGTaGGTCTTAACCACCTTGCCTAGGAGGCTTGTGGGG +
Preference number: 6 (lower is better)
Translates to: RMGQRPIPNRNW*VLTTLPRRLVG
Trigger: CCCCACAAGCCTCCTAGGCAAGGTGGTTAAGACTCACCAGTTCCTGTTTGGTATTGGACGCTGTCCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000463868.5
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS TCA 72 bp CAATCTTGCTCTTCCCATCCTGGAGTTCCGACAGCATaGAGGGACAGTGGCCCTTCGCCCAAGATGGAGAAT +
Preference number: 6 (lower is better)
Translates to: QSCSSHPGVPTA*RDSGPSPKMEN
Trigger: ATTCTCCATCTTGGGCGAAGGGCCACTGTCCCTTCATGCTGTCGGAACTCCAGGATGGGAAGAGCAAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000463868.5
ENST00000477869.6
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS GCA 72 bp CCTGTGTGGCTTGCAAGACCTGAGGGTGTCGGCTCATaGCCAGGTAATCATTACTACACCAGACGGACACAT +
Preference number: 6 (lower is better)
Translates to: PVWLARPEGVGS*PGNHYYTRRTH
Trigger: ATGTGTCCGTCTGGTGTAGTAATGATTACCTGGGCATGAGCCGACACCCTCAGGTCTTGCAAGCCACACAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000477869.6
ENST00000650242.1
CDS CAA 90 bp CCAAGATGGAGAATCTCCTCCAGCCTTTGTTGCCTTAAGGTGGATTaGAGAACAGTTTGGTCCTTGGGTAGCCAGGATGGGACAGCGTCC +
Preference number: 6 (lower is better)
Translates to: PRWRISSSLCCLKVD*RTVWSLGSQDGTAS
Trigger: GGACGCTGTCCCATCCTGGCTACCCAAGGACCAAACTGTTCTCAAATCCACCTTAAGGCAACAAAGGCTGGAGGAGATTCTCCATCTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000463868.5
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS TCA 72 bp CCATGTTCCCGAAGTAGGAACGTTCCCACTCACTCATaGGCTCAAAGTGTACAGGACGGCGACAGAAATTGC +
Preference number: 6 (lower is better)
Translates to: PCSRSRNVPTHS*AQSVQDGDRNC
Trigger: GCAATTTCTGTCGCCGTCCTGTACACTTTGAGCTCATGAGTGAGTGGGAACGTTCCTACTTCGGGAACATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 90 bp GGCTCATGCCCAGGTAATCATTACTACACCAGACGGACACATCCTTaGAGGCCACAGATGCCTCAGAGAAATGTTGGGCAAAGGGATATG +
Preference number: 6 (lower is better)
Translates to: GSCPGNHYYTRRTHP*RPQMPQRNVGQRDM
Trigger: CATATCCCTTTGCCCAACATTTCTCTGAGGCATCTGTGGCCTCAAAGGATGTGTCCGTCTGGTGTAGTAATGATTACCTGGGCATGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000477869.6
ENST00000650242.1
CDS CAA 72 bp AGAATCTCCTCCAGCCTTTGTTGCCTTAAGGTGGATTaGAGAACAGTTTGGTCCTTGGGTAGCCAGGATGGG +
Preference number: 6 (lower is better)
Translates to: RISSSLCCLKVD*RTVWSLGSQDG
Trigger: CCCATCCTGGCTACCCAAGGACCAAACTGTTCTCAAATCCACCTTAAGGCAACAAAGGCTGGAGGAGATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000463868.5
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS CAA 72 bp TGTTGCCTTAAGGTGGATTTGAGAACAGTTTGGTCCTaGGGTAGCCAGGATGGGACAGCGTCCAATACCAAA +
Preference number: 6 (lower is better)
Translates to: CCLKVDLRTVWS*GSQDGTASNTK
Trigger: TTTGGTATTGGACGCTGTCCCATCCTGGCTACCCAAGGACCAAACTGTTCTCAAATCCACCTTAAGGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000463868.5
ENST00000493869.2
ENST00000644983.1
ENST00000650242.1
CDS CAA 72 bp CCAGGTAATCATTACTACACCAGACGGACACATCCTTaGAGGCCACAGATGCCTCAGAGAAATGTTGGGCAA +
Preference number: 6 (lower is better)
Translates to: PGNHYYTRRTHP*RPQMPQRNVGQ
Trigger: TTGCCCAACATTTCTCTGAGGCATCTGTGGCCTCAAAGGATGTGTCCGTCTGGTGTAGTAATGATTACCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000477869.6
ENST00000650242.1
CDS CAA 72 bp TTTAGGTGGTCAGGGTCATTGTGCCTGAAGACAAACTaGGCTGCTCCACTGTTACGGATACCTTGGATCATG +
Preference number: 6 (lower is better)
Translates to: FRWSGSLCLKTN*AAPLLRIPWIM
Trigger: CATGATCCAAGGTATCCGTAACAGTGGAGCAGCCAAGTTTGTCTTCAGGCACAATGACCCTGACCACCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 72 bp GGGCAGCACTGTAGCAGCATGGCTGCAGTCACCATCTaGAACCTAAAGTCCTCACAAAACAACCTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: GQHCSSMAAVTI*NLKSSQNNLFF
Trigger: GAAAAAGAGGTTGTTTTGTGAGGACTTTAGGTTCAAGATGGTGACTGCAGCCATGCTGCTACAGTGCTGCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000396198.7
ENST00000644983.1
CDS TCA 72 bp CAGGTAATCATTACTACACCAGACGGACACATCCTTTaGGGCCACAGATGCCTCAGAGAAATGTTGGGCAAA +
Preference number: 6 (lower is better)
Translates to: QVIITTPDGHIL*GHRCLREMLGK
Trigger: TTTGCCCAACATTTCTCTGAGGCATCTGTGGCCTCAAAGGATGTGTCCGTCTGGTGTAGTAATGATTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000455688.2
ENST00000477869.6
ENST00000650242.1
CDS TCA 72 bp CTAGAAGTTTCTTTAGGTGGTCAGGGTCATTGTGCCTaGAGACAAACTTGGCTGCTCCACTGTTACGGATAC +
Preference number: 6 (lower is better)
Translates to: LEVSLGGQGHCA*RQTWLLHCYGY
Trigger: GTATCCGTAACAGTGGAGCAGCCAAGTTTGTCTTCAGGCACAATGACCCTGACCACCTAAAGAAACTTCTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 90 bp TTAGGGTTAGACTTCTCTAGAAGTTTCTTTAGGTGGTCAGGGTCATaGTGCCTGAAGACAAACTTGGCTGCTCCACTGTTACGGATACCT +
Preference number: 6 (lower is better)
Translates to: LGLDFSRSFFRWSGS*CLKTNLAAPLLRIP
Trigger: AGGTATCCGTAACAGTGGAGCAGCCAAGTTTGTCTTCAGGCACAATGACCCTGACCACCTAAAGAAACTTCTAGAGAAGTCTAACCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 90 bp CAGATGGCACCATCCATGGAGTGGACAGTCTCAAAGGCCACAATTTaGGGTATCTTAGGGTTAGACTTCTCTAGAAGTTTCTTTAGGTGG +
Preference number: 6 (lower is better)
Translates to: QMAPSMEWTVSKATI*GILGLDFSRSFFRW
Trigger: CCACCTAAAGAAACTTCTAGAGAAGTCTAACCCTAAGATACCCAAAATTGTGGCCTTTGAGACTGTCCACTCCATGGATGGTGCCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 72 bp GACTTCTCTAGAAGTTTCTTTAGGTGGTCAGGGTCATaGTGCCTGAAGACAAACTTGGCTGCTCCACTGTTA +
Preference number: 6 (lower is better)
Translates to: DFSRSFFRWSGS*CLKTNLAAPLL
Trigger: TAACAGTGGAGCAGCCAAGTTTGTCTTCAGGCACAATGACCCTGACCACCTAAAGAAACTTCTAGAGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1
CDS CAA 72 bp CCATCCATGGAGTGGACAGTCTCAAAGGCCACAATTTaGGGTATCTTAGGGTTAGACTTCTCTAGAAGTTTC +
Preference number: 6 (lower is better)
Translates to: PSMEWTVSKATI*GILGLDFSRSF
Trigger: GAAACTTCTAGAGAAGTCTAACCCTAAGATACCCAAAATTGTGGCCTTTGAGACTGTCCACTCCATGGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000335854.8
ENST00000396198.7
ENST00000498636.1
ENST00000650242.1