Pregenerated sensors for AKR1D1 (Homo sapiens)
Ensembl gene IDs: ENSG00000122787Ensembl transcript IDs: ENST00000242375.8, ENST00000411726.6, ENST00000432161.5, ENST00000468877.2, ENST00000470851.1
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCTTTCACCCAGGCCGGACTGCAGTGGCGCTATCTCGGCTCACTaGAAGCTCCTCCTCCCGGGTTCATGCCATTCTTCTGCCTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: ALSPRPDCSGAISAH*KLLLPGSCHSSASA Trigger: GGCTGAGGCAGAAGAATGGCATGAACCCGGGAGGAGGAGCTTGCAGTGAGCCGAGATAGCGCCACTGCAGTCCGGCCTGGGTGAAAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242375.8 |
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| 3UTR GCA 72 bp | CCCAGGCCGGACTGCAGTGGCGCTATCTCGGCTCACTaGAAGCTCCTCCTCCCGGGTTCATGCCATTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: PRPDCSGAISAH*KLLLPGSCHSS Trigger: AGAAGAATGGCATGAACCCGGGAGGAGGAGCTTGCAGTGAGCCGAGATAGCGCCACTGCAGTCCGGCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242375.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTACCCATTGCACCGTCTaGGCACTCGTGGGAGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTTHCTV*ALVGVK Trigger: TTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGT...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGATTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTACCCATTGCACCGTCTaGGCACTCGTGGGAGTGAAA | + |
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Preference number: 3 (lower is better) Translates to: TQITNATTQIHKLLVVICTHCTV*ALVGVK Trigger: TTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGT...ACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAATCTGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR TCA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAAGATCTCCTGACCTCCTaGTCTGCCCACCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKDLLTS*SAHLGL Trigger: GAGGCCAAGGTGGGCAGATCAGGAGGTCAGGAGATC...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR TCA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGGATCTCCTGACCTCCTaGTCTGCCCACCTTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: FIFTSRGLPIAPSWHSWEDLLTS*SAHLGL Trigger: GAGGCCAAGGTGGGCAGATCAGGAGGTCAGGAGATC...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR GCA 90 bp | TCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGCTATCTCGGCTCACTaGAAGCTCCTCCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: SFSHLGDYPLHRLGTRGSAISAH*KLLLPG Trigger: ACCCGGGAGGAGGAGCTTGCAGTGAGCCGAGATAGC...ACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR GCA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAAGCTATCTCGGCTCACTaGAAGCTCCTCCTCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKAISAH*KLLLPG Trigger: ACCCGGGAGGAGGAGCTTGCAGTGAGCCGAGATAGC...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR TCA 90 bp | TCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTATGGTCTCGATCTCCTaGCCTCCTGATCTGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: SFSHLGDYPLHRLGTRGSMVSIS*PPDLPT Trigger: GGTGGGCAGATCAGGAGGTCAGGAGATCGAGACCAT...ACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR GCA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAACCAAGCCAGCGTCTTTaGAAGCTTCCATCGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKPSQRL*KLPSPP Trigger: GGGAGGCGATGGAAGCTTGCAAAGACGCTGGCTTGG...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000432161.5 |
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| CDS-3UTR GCA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGCCTGACCTCCTGATCTaGCCACCTTGGCCTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: FIFTSRGLPIAPSWHSWEPDLLI*PPWPPK Trigger: TTTGGGAGGCCAAGGTGGGCAGATCAGGAGGTCAGG...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR GCA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGCTCCTCCCGGGTTCATaGCATTCTTCTGCCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: FIFTSRGLPIAPSWHSWELLPGS*HSSASA Trigger: GGCTGAGGCAGAAGAATGGCATGAACCCGGGAGGAG...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR CCA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTTGTCCTCTCCAGGGTTaGGCGGACCATCTCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTCPLQG*ADHLWD Trigger: GTCCCAGAGATGGTCCGCCCAACCCTGGAGAGGACA...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR CCA 90 bp | CTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTTGTCCTCTCCAGGGTTaGGCGGACCATCTCTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LSSFSHLGDYPLHRLGTRCPLQG*ADHLWD Trigger: GTCCCAGAGATGGTCCGCCCAACCCTGGAGAGGACA...ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | GGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATCTGTTCAGGATCAGCAGCCATGTTaGGACTCAGGCCCTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: GDYPLHRLGTRGSEKSVQDQQPC*DSGPLR Trigger: CCTTAAAGGGCCTGAGTCTCAACATGGCTGCTGATC...CTGAACAGATTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR GCA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCCAAGCCAGCGTCTTTaGAAGCTTCCATCGCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTPSQRL*KLPSPP Trigger: GGGAGGCGATGGAAGCTTGCAAAGACGCTGGCTTGG...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000432161.5 |
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| CDS-3UTR GCA 90 bp | TCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTCCACTGCCAGCACACTaGCACATGCACTTCGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: SFSHLGDYPLHRLGTRGSPLPAH*HMHFVV Trigger: GACAACGAAGTGCATGTGGCAGTGTGCTGGCAGTGG...ACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR GCA 90 bp | CTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTCCTGACCTCCTGATCTaGCCACCTTGGCCTCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LSSFSHLGDYPLHRLGTRPDLLI*PPWPPK Trigger: TTTGGGAGGCCAAGGTGGGCAGATCAGGAGGTCAGG...ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR TCA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGCTTAGAGGTATGCGGTaGCTTGCAGCACTGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: FIFTSRGLPIAPSWHSWELRGMR*LAALRS Trigger: GGATCTCAGTGCTGCAAGTCACCGCATACCTCTAAG...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR GCA 90 bp | TCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTAACCTTCACCGATGTTaGACAGGCTCCCTTAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SFSHLGDYPLHRLGTRGSNLHRC*TGSLRG Trigger: ACCCCTAAGGGAGCCTGTGCAACATCGGTGAAGGTT...ACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCTTAGAGGTATGCGGTaGCTTGCAGCACTGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTLRGMR*LAALRS Trigger: GGATCTCAGTGCTGCAAGTCACCGCATACCTCTAAG...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | GGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATCTGTTCAGAGAGTTTTGGCTGGGTaGAATACGGATGGCACTCAA | + |
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Preference number: 4 (lower is better) Translates to: GDYPLHRLGTRGSEKSVQRVLAG*NTDGTQ Trigger: TTGAGTGCCATCCGTATTTCACCCAGCCAAAACTCT...CTGAACAGATTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTGATCAGCAGCCATGTTaGGACTCAGGCCCTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTDQQPC*DSGPLR Trigger: CCTTAAAGGGCCTGAGTCTCAACATGGCTGCTGATC...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR GCA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTAACCTTCACCGATGTTaGACAGGCTCCCTTAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTNLHRC*TGSLRG Trigger: ACCCCTAAGGGAGCCTGTGCAACATCGGTGAAGGTT...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR GCA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATTCATGCCATTCTTCTaGCTCAGCCTCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKFMPFF*LSLLSS Trigger: GCTACTCAGGAGGCTGAGGCAGAAGAATGGCATGAA...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR GCA 90 bp | TCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTTTCATGCCATTCTTCTaGCTCAGCCTCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: SFSHLGDYPLHRLGTRGSFMPFF*LSLLSS Trigger: GCTACTCAGGAGGCTGAGGCAGAAGAATGGCATGAA...ACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR TCA 90 bp | TTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAGGTCGATTTAGGTTCTaGGTAGGTACCAAGTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: FSHLGDYPLHRLGTRGSEGRFRF*VGTKSD Trigger: ATCGGACTTGGTACCTACTCAGAACCTAAATCGACC...TTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGGGTCGATTTAGGTTCTaGGTAGGTACCAAGTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: FIFTSRGLPIAPSWHSWEGRFRF*VGTKSD Trigger: ATCGGACTTGGTACCTACTCAGAACCTAAATCGACC...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | GGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATCTGTTCAGACCATCTCTGGGACATaGTTTGTAGCCCATAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GDYPLHRLGTRGSEKSVQTISGT*FVAHSF Trigger: AAAGCTATGGGCTACAAATCATGTCCCAGAGATGGT...CTGAACAGATTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAACCCCTCGCTGGATGTTaGAACGCAAAACAATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKPLAGC*NAKQFE Trigger: CTCAAATTGTTTTGCGTTTCAACATCCAGCGAGGGG...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | TCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTCCCCTCGCTGGATGTTaGAACGCAAAACAATTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SFSHLGDYPLHRLGTRGSPLAGC*NAKQFE Trigger: CTCAAATTGTTTTGCGTTTCAACATCCAGCGAGGGG...ACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | GGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATCTGTTCAGAATGGGTATTCAGGATaGTCGCGCCACCTGAAAATT | + |
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Preference number: 4 (lower is better) Translates to: GDYPLHRLGTRGSEKSVQNGYSG*SRHLKI Trigger: AATTTTCAGGTGGCGCGATCATCCTGAATACCCATT...CTGAACAGATTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000432161.5 |
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| CDS-3UTR GCA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAAAGGTATGCGGTGACTTaGAGCACTGAGATCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKRYAVT*STEIHC Trigger: ACAATGGATCTCAGTGCTGCAAGTCACCGCATACCT...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | CTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGTCGATTTAGGTTCTaGGTAGGTACCAAGTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: LSSFSHLGDYPLHRLGTRGRFRF*VGTKSD Trigger: ATCGGACTTGGTACCTACTCAGAACCTAAATCGACC...ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR GCA 90 bp | CTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTAGGTATGCGGTGACTTaGAGCACTGAGATCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: LSSFSHLGDYPLHRLGTRRYAVT*STEIHC Trigger: ACAATGGATCTCAGTGCTGCAAGTCACCGCATACCT...ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR CCA 90 bp | GGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATCTGTTCAGGTATATTTCATCTCCTaGCTTAAAGGCCATGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GDYPLHRLGTRGSEKSVQVYFIS*LKGHGY Trigger: GTACCCATGGCCTTTAAGCCAGGAGATGAAATATAC...CTGAACAGATTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR CCA 90 bp | TTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAACTGTTTTGTAACCAATaGTCCAAAGCCTCAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FSHLGDYPLHRLGTRGSELFCNQ*SKASRP Trigger: TGGCCTTGAGGCTTTGGACCATTGGTTACAAAACAG...TTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
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| CDS-3UTR TCA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTACCATCTCTGGGACATaGTTTGTAGCCCATAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTTISGT*FVAHSF Trigger: AAAGCTATGGGCTACAAATCATGTCCCAGAGATGGT...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | TTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAGATGATCGCGCCACCTaGAAATTTTCTTTGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: FSHLGDYPLHRLGTRGSEDDRAT*KFSLIL Trigger: AAGGATCAAAGAAAATTTTCAGGTGGCGCGATCATC...TTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000432161.5 |
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| CDS-3UTR CCA 90 bp | TCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGTATATTTCATCTCCTaGCTTAAAGGCCATGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SFSHLGDYPLHRLGTRGSVYFIS*LKGHGY Trigger: GTACCCATGGCCTTTAAGCCAGGAGATGAAATATAC...ACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR CCA 90 bp | GGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATCTGTTCAGGTATTCATCATGAAATaGGTATTCAGGATGATCGCG | + |
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Preference number: 4 (lower is better) Translates to: GDYPLHRLGTRGSEKSVQVFIMK*VFRMIA Trigger: CGCGATCATCCTGAATACCCATTTCATGATGAATAC...CTGAACAGATTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR CCA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAAAAATTTCAAGAGTTTTaGCTGGGTGAAATACGGATG | + |
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Preference number: 4 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKKFQEF*LGEIRM Trigger: CATCCGTATTTCACCCAGCCAAAACTCTTGAAATTT...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 46% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR CCA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTGTATTCATCATGAAATaGGTATTCAGGATGATCGCG | + |
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Preference number: 4 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTVFIMK*VFRMIA Trigger: CGCGATCATCCTGAATACCCATTTCATGATGAATAC...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
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| CDS-3UTR TCA 90 bp | TTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTTGCCTTTATGGTCTCGATCTCCTaGCCTCCTGATCTGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLPRFINYLLSYVAFMVSIS*PPDLPT Trigger: GGTGGGCAGATCAGGAGGTCAGGAGATCGAGACCAT...AAAGGCAACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR GCA 90 bp | TTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTTGCCTTTCTCCTCCCGGGTTCATaGCATTCTTCTGCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLPRFINYLLSYVAFLLPGS*HSSASA Trigger: GGCTGAGGCAGAAGAATGGCATGAACCCGGGAGGAG...AAAGGCAACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CCA 90 bp | CTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTAAATTTCAAGAGTTTTaGCTGGGTGAAATACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSSFSHLGDYPLHRLGTRKFQEF*LGEIRM Trigger: CATCCGTATTTCACCCAGCCAAAACTCTTGAAATTT...ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
||
| CDS-3UTR GCA 90 bp | TTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTTGCCTTTAACCTTCACCGATGTTaGACAGGCTCCCTTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLPRFINYLLSYVAFNLHRC*TGSLRG Trigger: ACCCCTAAGGGAGCCTGTGCAACATCGGTGAAGGTT...AAAGGCAACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR TCA 90 bp | GGTTCTATAATCAATGTAGGCAAGATTGACAGTAAGATGTGTAAGTATGGATCAGATGATCGCGCCACATaGGCAATTCTACAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSIINVGKIDSKMCKYGSDDRAT*AILQSG Trigger: TCCGCTTTGTAGAATTGCTCATGTGGCGCGATCATC...TGATCCATACTTACACATCTTACTGTCAATCTTGCCTACATTGATTATAGAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR TCA 90 bp | ACTCAGATTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTGATGATCGCGCCACATaGGCAATTCTACAAAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQITNATTQIHKLLVVICDDRAT*AILQSG Trigger: TCCGCTTTGTAGAATTGCTCATGTGGCGCGATCATC...ACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAATCTGAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR TCA 90 bp | ACTCAGATTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTAGAGTTTTGGCTGGGTaGAATACGGATGGCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQITNATTQIHKLLVVICRVLAG*NTDGTQ Trigger: TTGAGTGCCATCCGTATTTCACCCAGCCAAAACTCT...ACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAATCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR TCA 90 bp | GGTTCTATAATCAATGTAGGCAAGATTGACAGTAAGATGTGTAAGTATGGATCACCCCTCGCTGGATGTTaGAACGCAAAACAATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSIINVGKIDSKMCKYGSPLAGC*NAKQFE Trigger: CTCAAATTGTTTTGCGTTTCAACATCCAGCGAGGGG...TGATCCATACTTACACATCTTACTGTCAATCTTGCCTACATTGATTATAGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR TCA 90 bp | ACTCAGATTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTACCATCTCTGGGACATaGTTTGTAGCCCATAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQITNATTQIHKLLVVICTISGT*FVAHSF Trigger: AAAGCTATGGGCTACAAATCATGTCCCAGAGATGGT...ACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAATCTGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CCA 90 bp | ACTCAGATTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTCTGTTTTGTAACCAATaGTCCAAAGCCTCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQITNATTQIHKLLVVICLFCNQ*SKASRP Trigger: TGGCCTTGAGGCTTTGGACCATTGGTTACAAAACAG...ACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAATCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR TCA 90 bp | TTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTTGCCTTTAACTCTCTCATCCTATaGCAGTATGACAGTGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLPRFINYLLSYVAFNSLIL*QYDSDL Trigger: TAGGTCACTGTCATACTGTCATAGGATGAGAGAGTT...AAAGGCAACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000242375.8 |
||
| CDS-3UTR CCA 90 bp | TTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTTGCCTTTGTATATTTCATCTCCTaGCTTAAAGGCCATGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LPTLLPRFINYLLSYVAFVYFIS*LKGHGY Trigger: GTACCCATGGCCTTTAAGCCAGGAGATGAAATATAC...AAAGGCAACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CCA 90 bp | GGTTCTATAATCAATGTAGGCAAGATTGACAGTAAGATGTGTAAGTATGGATCAAAATTTCAAGAGTTTTaGCTGGGTGAAATACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GSIINVGKIDSKMCKYGSKFQEF*LGEIRM Trigger: CATCCGTATTTCACCCAGCCAAAACTCTTGAAATTT...TGATCCATACTTACACATCTTACTGTCAATCTTGCCTACATTGATTATAGAACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CAA 90 bp | TCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGTGTCCTCTCCAGGGTaGGGCGGACCATCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SFSHLGDYPLHRLGTRGSVSSPG*GGPSLG Trigger: TCCCAGAGATGGTCCGCCCAACCCTGGAGAGGACAC...ACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
||
| CDS-3UTR CAA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGACCAAGCCAGCGTCTTaGCAAGCTTCCATCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIFTSRGLPIAPSWHSWETKPAS*QASIAS Trigger: GGAGGCGATGGAAGCTTGCAAAGACGCTGGCTTGGT...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000432161.5 |
||
| CDS-3UTR CAA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAACTAGGGGACTACCCATaGCACCGTCTTGGCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKLGDYP*HRLGTR Trigger: ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAG...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTACCAAGCCAGCGTCTTaGCAAGCTTCCATCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTTKPAS*QASIAS Trigger: GGAGGCGATGGAAGCTTGCAAAGACGCTGGCTTGGT...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000432161.5 |
||
| CDS-3UTR CAA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAAACCCATTGCACCGTCTaGGCACTCGTGGGAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKTHCTV*ALVGVK Trigger: TTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGT...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
||
| CDS-3UTR CAA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGACCCATTGCACCGTCTaGGCACTCGTGGGAGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FIFTSRGLPIAPSWHSWETHCTV*ALVGVK Trigger: TTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGT...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
||
| CDS-3UTR CAA 90 bp | CTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTCTAGGGGACTACCCATaGCACCGTCTTGGCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LSSFSHLGDYPLHRLGTRLGDYP*HRLGTR Trigger: ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAG...ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
||
| CDS CCA 90 bp | TTCAGTTGCTCATGGGCTGCTGGTCTGAGGGCCTCAGATCCTCACTaGCTGTTGGCTGGACATATCCTTGCTACATTGGCCTTTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: FSCSWAAGLRASDPH*LLAGHILATLAFSH Trigger: ATGTGAAAAGGCCAATGTAGCAAGGATATGTCCAGCCAACAGCCAGTGAGGATCTGAGGCCCTCAGACCAGCAGCCCATGAGCAACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS CCA 90 bp | CCTCAGATCCTCACTGGCTGTTGGCTGGACATATCCTTGCTACATTaGCCTTTTCACATTGCAGTTCATGGCATGGCAGCTGGCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PQILTGCWLDISLLH*PFHIAVHGMAAGFS Trigger: AGAGAAGCCAGCTGCCATGCCATGAACTGCAATGTGAAAAGGCCAATGTAGCAAGGATATGTCCAGCCAACAGCCAGTGAGGATCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS-3UTR CAA 90 bp | TCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATGCCTGCGGTTAAAATaGGACACTCCCAGGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SHLGDYPLHRLGTRGSEKCLRLK*DTPRDF Trigger: GAAATCCCTGGGAGTGTCCAATTTTAACCGCAGGCA...TTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000432161.5 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTTGCCTGCGGTTAAAATaGGACACTCCCAGGGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTCLRLK*DTPRDF Trigger: GAAATCCCTGGGAGTGTCCAATTTTAACCGCAGGCA...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000432161.5 |
||
| CDS GCA 90 bp | TGTCCACTTCTGTGTTCACTTACATGGTTATTAGCAAAATTCAGTTaGTCATGGGCTGCTGGTCTGAGGGCCTCAGATCCTCACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPLLCSLTWLLAKFS*SWAAGLRASDPHWL Trigger: CAGCCAGTGAGGATCTGAGGCCCTCAGACCAGCAGCCCATGAGCAACTGAATTTTGCTAATAACCATGTAAGTGAACACAGAAGTGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS-3UTR CAA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGAACTTCGTGTTCATTTaGGTAGATGTAGGCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: FIFTSRGLPIAPSWHSWENFVFI*VDVGPI Trigger: GATGGGGCCTACATCTACCAAAATGAACACGAAGTT...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
||
| CDS GCA 90 bp | GGACACTGCAGGTCACCTGTAACCAGTTTCTCTGAGTGCAGAGTATaGACTGAATGGAGAGTTACTCGTAGTATGGGAAGATCAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHCRSPVTSFSECRV*TEWRVTRSMGRSSK Trigger: CTTGCTTGATCTTCCCATACTACGAGTAACTCTCCATTCAGTGCATACTCTGCACTCAGAGAAACTGGTTACAGGTGACCTGCAGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS GCA 90 bp | ATTCACCCAGGACACTGCAGGTCACCTGTAACCAGTTTCTCTGAGTaGAGAGTATGCACTGAATGGAGAGTTACTCGTAGTATGGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IHPGHCRSPVTSFSE*RVCTEWRVTRSMGR Trigger: TCTTCCCATACTACGAGTAACTCTCCATTCAGTGCATACTCTGCACTCAGAGAAACTGGTTACAGGTGACCTGCAGTGTCCTGGGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTAACTTCGTGTTCATTTaGGTAGATGTAGGCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTNFVFI*VDVGPI Trigger: GATGGGGCCTACATCTACCAAAATGAACACGAAGTT...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000242375.8 ENST00000411726.6 ENST00000432161.5 |
||
| CDS-3UTR CAA 90 bp | GGTTCTATAATCAATGTAGGCAAGATTGACAGTAAGATGTGTAAGTATGGATCAGTGTCCTCTCCAGGGTaGGGCGGACCATCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSIINVGKIDSKMCKYGSVSSPG*GGPSLG Trigger: TCCCAGAGATGGTCCGCCCAACCCTGGAGAGGACAC...TGATCCATACTTACACATCTTACTGTCAATCTTGCCTACATTGATTATAGAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CAA 90 bp | GGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGTGAAAAATCTGTTCAGCTAAACATACATACATaGGAGGGAAACAAACACCAA | + |
|
Preference number: 5 (lower is better) Translates to: GDYPLHRLGTRGSEKSVQLNIHT*EGNKHQ Trigger: TTGGTGTTTGTTTCCCTCCAATGTATGTATGTTTAG...CTGAACAGATTTTTCACTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CAA 90 bp | TTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTCGTGGGAGACTTGTTGTCATATGTaGCCTTTGATGTCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIFTSRGLPIAPSWHSWETCCHM*PLMSFL Trigger: CAGAAAAGACATCAAAGGCAACATATGACAACAAGT...CTCCCACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS CCA 90 bp | AGGTCACCTGTAACCAGTTTCTCTGAGTGCAGAGTATGCACTGAATaGAGAGTTACTCGTAGTATGGGAAGATCAAGCAAGGCAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RSPVTSFSECRVCTE*RVTRSMGRSSKASL Trigger: TAAACTTGCCTTGCTTGATCTTCCCATACTACGAGTAACTCTCCATTCAGTGCATACTCTGCACTCAGAGAAACTGGTTACAGGTGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGATTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTCTAGGGGACTACCCATaGCACCGTCTTGGCACTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TQITNATTQIHKLLVVICLGDYP*HRLGTR Trigger: ACGAGTGCCAAGACGGTGCAATGGGTAGTCCCCTAG...ACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAATCTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CAA 90 bp | CCTCTCTCTTCATTTTCACATCTAGGGGACTACCCATTGCACCGTCTTGGCACTACTTGTTGTCATATGTaGCCTTTGATGTCTTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLSSFSHLGDYPLHRLGTTCCHM*PLMSFL Trigger: CAGAAAAGACATCAAAGGCAACATATGACAACAAGT...AGTGCCAAGACGGTGCAATGGGTAGTCCCCTAGATGTGAAAATGAAGAGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CAA 90 bp | TTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTTGCCTTTAACTTCGTGTTCATTTaGGTAGATGTAGGCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LPTLLPRFINYLLSYVAFNFVFI*VDVGPI Trigger: GATGGGGCCTACATCTACCAAAATGAACACGAAGTT...AAAGGCAACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS-3UTR CAA 90 bp | TTACCAACGCTACTACCCAGATTCATAAATTACTTGTTGTCATATGTTGCCTTTCTAAACATACATACATaGGAGGGAAACAAACACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPTLLPRFINYLLSYVAFLNIHT*EGNKHQ Trigger: TTGGTGTTTGTTTCCCTCCAATGTATGTATGTTTAG...AAAGGCAACATATGACAACAAGTAATTTATGAATCTGGGTAGTAGCGTTGGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000242375.8 ENST00000411726.6 |
||
| CDS CCA 72 bp | TCATGGGCTGCTGGTCTGAGGGCCTCAGATCCTCACTaGCTGTTGGCTGGACATATCCTTGCTACATTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SWAAGLRASDPH*LLAGHILATLA Trigger: GGCCAATGTAGCAAGGATATGTCCAGCCAACAGCCAGTGAGGATCTGAGGCCCTCAGACCAGCAGCCCATGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS CAA 90 bp | TGCTCATGGGCTGCTGGTCTGAGGGCCTCAGATCCTCACTGGCTGTaGGCTGGACATATCCTTGCTACATTGGCCTTTTCACATTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: CSWAAGLRASDPHWL*AGHILATLAFSHCS Trigger: ACTGCAATGTGAAAAGGCCAATGTAGCAAGGATATGTCCAGCCAACAGCCAGTGAGGATCTGAGGCCCTCAGACCAGCAGCCCATGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS CAA 72 bp | CCTCACTGGCTGTTGGCTGGACATATCCTTGCTACATaGGCCTTTTCACATTGCAGTTCATGGCATGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PHWLLAGHILAT*AFSHCSSWHGS Trigger: GCTGCCATGCCATGAACTGCAATGTGAAAAGGCCAATGTAGCAAGGATATGTCCAGCCAACAGCCAGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS CCA 72 bp | TGCTACATTGGCCTTTTCACATTGCAGTTCATGGCATaGCAGCTGGCTTCTCTTTCAGACGCCCCTTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: CYIGLFTLQFMA*QLASLSDAPFT Trigger: TGTGAAAGGGGCGTCTGAAAGAGAAGCCAGCTGCCATGCCATGAACTGCAATGTGAAAAGGCCAATGTAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS CAA 72 bp | CCTCAGATCCTCACTGGCTGTTGGCTGGACATATCCTaGCTACATTGGCCTTTTCACATTGCAGTTCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQILTGCWLDIS*LHWPFHIAVHG Trigger: GCCATGAACTGCAATGTGAAAAGGCCAATGTAGCAAGGATATGTCCAGCCAACAGCCAGTGAGGATCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS GCA 72 bp | GCTGGACATATCCTTGCTACATTGGCCTTTTCACATTaGAGTTCATGGCATGGCAGCTGGCTTCTCTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AGHILATLAFSH*SSWHGSWLLFQ Trigger: CTGAAAGAGAAGCCAGCTGCCATGCCATGAACTGCAATGTGAAAAGGCCAATGTAGCAAGGATATGTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS GCA 72 bp | CTCAGATCCTCACTGGCTGTTGGCTGGACATATCCTTaGTACATTGGCCTTTTCACATTGCAGTTCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRSSLAVGWTYP*YIGLFTLQFMA Trigger: TGCCATGAACTGCAATGTGAAAAGGCCAATGTAGCAAGGATATGTCCAGCCAACAGCCAGTGAGGATCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
||
| CDS CCA 72 bp | TCACTTACATGGTTATTAGCAAAATTCAGTTGCTCATaGGCTGCTGGTCTGAGGGCCTCAGATCCTCACTGG | + |
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Preference number: 6 (lower is better) Translates to: SLTWLLAKFSCS*AAGLRASDPHW Trigger: CCAGTGAGGATCTGAGGCCCTCAGACCAGCAGCCCATGAGCAACTGAATTTTGCTAATAACCATGTAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
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| CDS CAA 72 bp | GGCTGGACATATCCTTGCTACATTGGCCTTTTCACATaGCAGTTCATGGCATGGCAGCTGGCTTCTCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GWTYPCYIGLFT*QFMAWQLASLS Trigger: TGAAAGAGAAGCCAGCTGCCATGCCATGAACTGCAATGTGAAAAGGCCAATGTAGCAAGGATATGTCCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
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| CDS GCA 72 bp | CTGTGTTCACTTACATGGTTATTAGCAAAATTCAGTTaGTCATGGGCTGCTGGTCTGAGGGCCTCAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: LCSLTWLLAKFS*SWAAGLRASDP Trigger: AGGATCTGAGGCCCTCAGACCAGCAGCCCATGAGCAACTGAATTTTGCTAATAACCATGTAAGTGAACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468877.2 |
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| CDS GCA 72 bp | AGGTCACCTGTAACCAGTTTCTCTGAGTGCAGAGTATaGACTGAATGGAGAGTTACTCGTAGTATGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RSPVTSFSECRV*TEWRVTRSMGR Trigger: TCTTCCCATACTACGAGTAACTCTCCATTCAGTGCATACTCTGCACTCAGAGAAACTGGTTACAGGTGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468877.2 |
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| CDS CCA 72 bp | GTACCCAGAAGTGGAGATTTCATATACCTGTACTTATaGTTAGGAATGCCTGTTCTGACTGTTACTTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: VPRSGDFIYLYL*LGMPVLTVTFH Trigger: ATGAAAAGTAACAGTCAGAACAGGCATTCCTAACCATAAGTACAGGTATATGAAATCTCCACTTCTGGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470851.1 |
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