Pregenerated sensors for AKR1C1 (Homo sapiens)
Ensembl gene IDs: ENSG00000187134Ensembl transcript IDs: ENST00000380872.9
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCCTGGCTGCGCTCTCATGTGTGTGCAGGGCAGTGAGGCAGCTCTaGTTCAGGATGTCCATGGGGCATCTGTCTGGGTGCCTCCATCTC | + |
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Preference number: 1 (lower is better) Translates to: FLAALSCVCRAVRQL*FRMSMGHLSGCLHL Trigger: GAGATGGAGGCACCCAGACAGATGCCCCATGGACATCCTGAAGCAGAGCTGCCTCACTGCCCTGCACACACATGAGAGCGCAGCCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 90 bp | GTGAGGCAGCTCTGCTTCAGGATGTCCATGGGGCATCTGTCTGGGTaGCTCCATCTCCTCCGTGCAGTTCTTCATCCTCCAGCCATCCAG | + |
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Preference number: 1 (lower is better) Translates to: VRQLCFRMSMGHLSG*LHLLRAVLHPPAIQ Trigger: CTGGATGGCTGGAGGATGAAGAACTGCACGGAGGAGATGGAGGCACCCAGACAGATGCCCCATGGACATCCTGAAGCAGAGCTGCCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 90 bp | GGCAGTGAGGCAGCTCTGCTTCAGGATGTCCATGGGGCATCTGTCTaGGTGCCTCCATCTCCTCCGTGCAGTTCTTCATCCTCCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: GSEAALLQDVHGASV*VPPSPPCSSSSSSH Trigger: ATGGCTGGAGGATGAAGAACTGCACGGAGGAGATGGAGGCACCCAGACAGATGCCCCATGGACATCCTGAAGCAGAGCTGCCTCACTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 90 bp | GAATGTTGCCCAGTCCTTCTGTTCCTGGCTGCGCTCTCATGTGTGTaGAGGGCAGTGAGGCAGCTCTGCTTCAGGATGTCCATGGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: ECCPVLLFLAALSCV*RAVRQLCFRMSMGH Trigger: ATGCCCCATGGACATCCTGAAGCAGAGCTGCCTCACTGCCCTGCACACACATGAGAGCGCAGCCAGGAACAGAAGGACTGGGCAACATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 90 bp | GCACCAGCTGTGGTGGTAGCAGTGGGATTTGAGCTTGCCCTAAGTTaGCCAGGGAAAGTGGTTTCTCAGGCAATGGGGGAAGAGGGGCTA | + |
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Preference number: 1 (lower is better) Translates to: APAVVVAVGFELALS*PGKVVSQAMGEEGL Trigger: TAGCCCCTCTTCCCCCATTGCCTGAGAAACCACTTTCCCTGGGCAACTTAGGGCAAGCTCAAATCCCACTGCTACCACCACAGCTGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 90 bp | TTGAGGTGCTGTGTGGACTGTGCTGGTTGGTCTCCAGCTAGGAGGTaGCACTTGCAAAAGAGCACCAGCTGTGGTGGTAGCAGTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: LRCCVDCAGWSPARR*HLQKSTSCGGSSGI Trigger: AATCCCACTGCTACCACCACAGCTGGTGCTCTTTTGCAAGTGCCACCTCCTAGCTGGAGACCAACCAGCACAGTCCACACAGCACCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 90 bp | CAGCTTCTGTGCTCATATCTGCCATGCACTTCCAGCTCTCCCCTGTaGATTCTGCTCAAGGCACTTGTCCGCACAGGATCAAAGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: QLLCSYLPCTSSSPL*ILLKALVRTGSKPS Trigger: AGAAGGCTTTGATCCTGTGCGGACAAGTGCCTTGAGCAGAATCCACAGGGGAGAGCTGGAAGTGCATGGCAGATATGAGCACAGAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 90 bp | TGGCACTTGCAAAAGAGCACCAGCTGTGGTGGTAGCAGTGGGATTTaGGCTTGCCCTAAGTTGCCCAGGGAAAGTGGTTTCTCAGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: WHLQKSTSCGGSSGI*ACPKLPRESGFSGN Trigger: ATTGCCTGAGAAACCACTTTCCCTGGGCAACTTAGGGCAAGCTCAAATCCCACTGCTACCACCACAGCTGGTGCTCTTTTGCAAGTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 90 bp | TCATATTCCATGTTTAGAAAATTGGCCTGGGCTCCGCCTGAATGTTaGCCAGTCCTTCTGTTCCTGGCTGCGCTCTCATGTGTGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SYSMFRKLAWAPPEC*PVLLFLAALSCVCR Trigger: CCTGCACACACATGAGAGCGCAGCCAGGAACAGAAGGACTGGGCAACATTCAGGCGGAGCCCAGGCCAATTTTCTAAACATGGAATATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 90 bp | GCAGGCATTTTCTCCTTCCTGGGAACAGTTCTATTTATTCTTCCTTaGGGTGCTGTGTGGACTGTGCTGGTTGGTCTCCAGCTAGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: AGIFSFLGTVLFILP*GAVWTVLVGLQLGG Trigger: ACCTCCTAGCTGGAGACCAACCAGCACAGTCCACACAGCACCTCAAGGAAGAATAAATAGAACTGTTCCCAGGAAGGAGAAAATGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 90 bp | TCAAGACCTCTGACTGGTCAGGGTGTGGTACGCAGTGGTAACAGCTaGGCTCATGCAGGCATTTTCTCCTTCCTGGGAACAGTTCTATTT | + |
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Preference number: 1 (lower is better) Translates to: SRPLTGQGVVRSGNS*AHAGIFSFLGTVLF Trigger: AAATAGAACTGTTCCCAGGAAGGAGAAAATGCCTGCATGAGCTCAGCTGTTACCACTGCGTACCACACCCTGACCAGTCAGAGGTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 90 bp | CATTTTCTCCTTCCTGGGAACAGTTCTATTTATTCTTCCTTGAGGTaGTGTGTGGACTGTGCTGGTTGGTCTCCAGCTAGGAGGTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: HFLLPGNSSIYSSLR*CVDCAGWSPARRWH Trigger: GTGCCACCTCCTAGCTGGAGACCAACCAGCACAGTCCACACAGCACCTCAAGGAAGAATAAATAGAACTGTTCCCAGGAAGGAGAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 90 bp | AGTTCTATTTATTCTTCCTTGAGGTGCTGTGTGGACTGTGCTGGTTaGTCTCCAGCTAGGAGGTGGCACTTGCAAAAGAGCACCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SSIYSSLRCCVDCAG*SPARRWHLQKSTSC Trigger: ACAGCTGGTGCTCTTTTGCAAGTGCCACCTCCTAGCTGGAGACCAACCAGCACAGTCCACACAGCACCTCAAGGAAGAATAAATAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 90 bp | CAGCACCTATGCAGTTGGCAAGGCTATTTTCATTCCTTTCATTCATaGAGTGCTCTGCTAACAGTGCCAGGTTTACATCCAGGCAGTCTG | + |
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Preference number: 1 (lower is better) Translates to: QHLCSWQGYFHSFHS*SALLTVPGLHPGSL Trigger: CAGACTGCCTGGATGTAAACCTGGCACTGTTAGCAGAGCACTGCATGAATGAAAGGAATGAAAATAGCCTTGCCAACTGCATAGGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 90 bp | ACAGTGTTTGAGAGAATTCTCTCTAATGCTATCATGTCCCCACCATaGCACAGTTGCCTAACAAAGCCATTCTCAGAAGATAGCCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: TVFERILSNAIMSPP*HSCLTKPFSEDSPG Trigger: GCCTGGGCTATCTTCTGAGAATGGCTTTGTTAGGCAACTGTGTCATGGTGGGGACATGATAGCATTAGAGAGAATTCTCTCAAACACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 90 bp | CTATCGACAAGGTACCTAATCAACCAAGAACTCTCTTACAGAGGTTaGAAGAGATTACTGTTCTTTCCATGCCTGCTAACACAACATGCA | + |
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Preference number: 1 (lower is better) Translates to: LSTRYLINQELSYRG*KRLLFFPCLLTQHA Trigger: TGCATGTTGTGTTAGCAGGCATGGAAAGAACAGTAATCTCTTTCAACCTCTGTAAGAGAGTTCTTGGTTGATTAGGTACCTTGTCGATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 90 bp | TTACTTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATaGCTTGGAGGAATGCAAGATTTCAGTGGAGAAAGTAATTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: LLEQEFERSEFNPPG*LGGMQDFSGESNCR Trigger: TCTGCAATTACTTTCTCCACTGAAATCTTGCATTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAAGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 90 bp | AGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAATaGAAGATTTCAGTGGAGAAAGTAATTGCAGATGTGGTGGAAATA | + |
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Preference number: 1 (lower is better) Translates to: SLKEVNSTLLDDLEE*KISVEKVIADVVEI Trigger: TATTTCCACCACATCTGCAATTACTTTCTCCACTGAAATCTTGCATTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGAGAGGCATGCTCACACTaGCTCCCATCTGCCATCTGG | + |
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Preference number: 2 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGEACSH*LPSAIW Trigger: CCAGATGGCAGATGGGAGGCAGTGTGAGCATGCCTC...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CAA 90 bp | GGATTCTGCTCAAGGCACTTGTCCGCACAGGATCAAAGCCTTCTCTaGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GFCSRHLSAQDQSLL*WPEFPDPQWGCMLW Trigger: CCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGCTTTGATCCTGTGCGGACAAGTGCCTTGAGCAGAATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CAA 90 bp | TGCAGGCATTTTCTCCTTCCTGGGAACAGTTCTATTTATTCTTCCTaGAGGTGCTGTGTGGACTGTGCTGGTTGGTCTCCAGCTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: CRHFLLPGNSSIYSS*RCCVDCAGWSPARR Trigger: CCTCCTAGCTGGAGACCAACCAGCACAGTCCACACAGCACCTCAAGGAAGAATAAATAGAACTGTTCCCAGGAAGGAGAAAATGCCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR GCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCCTCACCCAGCACCTATaGAGTTGGCAAGGCTATTTT | + |
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Preference number: 2 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSLTQHL*SWQGYF Trigger: AAAATAGCCTTGCCAACTGCATAGGTGCTGGGTGAG...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR GCA 90 bp | AGCCCAGGCATTATGCAACACATGACTGTCATTGGTGACAGGGAAGGAGTCACTCTGGCCAATGGGCTTTaGTGTAGCTTGCTGAAATCA | + |
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Preference number: 2 (lower is better) Translates to: SPGIMQHMTVIGDREGVTLANGL*CSLLKS Trigger: TGATTTCAGCAAGCTACAGCAAAGCCCATTGGCCAG...AGTGACTCCTTCCCTGTCACCAATGACAGTCATGTGTTGCATAATGCCTGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR GCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCCATTCCTTTCATTCATaGAGTGCTCTGCTAACAGTG | + |
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Preference number: 2 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSHSFHS*SALLTV Trigger: CACTGTTAGCAGAGCACTGCATGAATGAAAGGAATG...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR CCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCGATCTTTCCCCTCCCTaGCTAACTATATTACAACAT | + |
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Preference number: 2 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSDLSPP*LTILQH Trigger: ATGTTGTAATATAGTTAGCCAGGGAGGGGAAAGATC...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR CCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCGAGAAGTGTTTCTTATaGATGAGCAAGAAAAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSEKCFL*MSKKSG Trigger: ACCACTTTTCTTGCTCATCCATAAGAAACACTTCTC...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CAA 90 bp | CCTATCGACAAGGTACCTAATCAACCAAGAACTCTCTTACAGAGGTaGAAAGAGATTACTGTTCTTTCCATGCCTGCTAACACAACATGC | + |
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Preference number: 2 (lower is better) Translates to: PIDKVPNQPRTLLQR*KEITVLSMPANTTC Trigger: GCATGTTGTGTTAGCAGGCATGGAAAGAACAGTAATCTCTTTCAACCTCTGTAAGAGAGTTCTTGGTTGATTAGGTACCTTGTCGATAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR GCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAGGAAGGAGTCACTTGTaGCATTTTCAATGTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEGRSHL*HFQCFP Trigger: AGGAAAACATTGAAAATGGCACAAGTGACTCCTTCC...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR GCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAAGTGGAGAAAGTAATTaGAGATGTGGTGGAAATAGC | + |
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Preference number: 2 (lower is better) Translates to: LNRSLKEVNSTLLDDLEESGESN*RCGGNS Trigger: GCTATTTCCACCACATCTGCAATTACTTTCTCCACT...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 72 bp | CCCGGTCTGCCCACAAGGCTGGACACCCAGCTTCTGTaGTCATATCTGCCATGCACTTCCAGCTCTCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PGLPTRLDTQLL*SYLPCTSSSPL Trigger: CAGGGGAGAGCTGGAAGTGCATGGCAGATATGAGCACAGAAGCTGGGTGTCCAGCCTTGTGGGCAGACCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 72 bp | GCGCTCTCATGTGTGTGCAGGGCAGTGAGGCAGCTCTaGTTCAGGATGTCCATGGGGCATCTGTCTGGGTGC | + |
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Preference number: 3 (lower is better) Translates to: ALSCVCRAVRQL*FRMSMGHLSGC Trigger: GCACCCAGACAGATGCCCCATGGACATCCTGAAGCAGAGCTGCCTCACTGCCCTGCACACACATGAGAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 72 bp | AGCCCAGGCTTCACCTCAGCACAAGTCTCCCAGCAGTaGATACCAGCACCAGCTCTGATTGAGGTGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: SPGFTSAQVSQQ*IPAPALIEVAG Trigger: CCCTGCCACCTCAATCAGAGCTGGTGCTGGTATCCACTGCTGGGAGACTTGTGCTGAGGTGAAGCCTGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 72 bp | GCAGCTCTGCTTCAGGATGTCCATGGGGCATCTGTCTaGGTGCCTCCATCTCCTCCGTGCAGTTCTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: AALLQDVHGASV*VPPSPPCSSSS Trigger: GGATGAAGAACTGCACGGAGGAGATGGAGGCACCCAGACAGATGCCCCATGGACATCCTGAAGCAGAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 72 bp | CACAAGTCTCCCAGCAGTGGATACCAGCACCAGCTCTaGTTGAGGTGGCAGGGGAGTGACGTAGACTCTGAG | + |
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Preference number: 3 (lower is better) Translates to: HKSPSSGYQHQL*LRWQGSDVDSE Trigger: CTCAGAGTCTACGTCACTCCCCTGCCACCTCAATCAGAGCTGGTGCTGGTATCCACTGCTGGGAGACTTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 72 bp | AATAACCATGGCTTTCAGGCCACATCCCTCCCGGTCTaGCCACAAGGCTGGACACCCAGCTTCTGTGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: NNHGFQATSLPV*PQGWTPSFCAH Trigger: ATGAGCACAGAAGCTGGGTGTCCAGCCTTGTGGGCAGACCGGGAGGGATGTGGCCTGAAAGCCATGGTTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 72 bp | GCCCCTGTGAGCGCCAAGGGGTGGTTCTCAGGCTGCTaGGGTAATGTTCCAGAGGAGAGTTTAATTGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: APVSAKGWFSGC*GNVPEESLIAS Trigger: AGAGGCAATTAAACTCTCCTCTGGAACATTACCCCAGCAGCCTGAGAACCACCCCTTGGCGCTCACAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 72 bp | TGTGTGGACTGTGCTGGTTGGTCTCCAGCTAGGAGGTaGCACTTGCAAAAGAGCACCAGCTGTGGTGGTAGC | + |
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Preference number: 3 (lower is better) Translates to: CVDCAGWSPARR*HLQKSTSCGGS Trigger: GCTACCACCACAGCTGGTGCTCTTTTGCAAGTGCCACCTCCTAGCTGGAGACCAACCAGCACAGTCCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR GCA 72 bp | AGGCTGGACACCCAGCTTCTGTGCTCATATCTGCCATaGACTTCCAGCTCTCCCCTGTGGATTCTGCTCAAG | + |
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Preference number: 3 (lower is better) Translates to: RLDTQLLCSYLP*TSSSPLWILLK Trigger: CTTGAGCAGAATCCACAGGGGAGAGCTGGAAGTGCATGGCAGATATGAGCACAGAAGCTGGGTGTCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 72 bp | CTGACTGGTCAGGGTGTGGTACGCAGTGGTAACAGCTaGGCTCATGCAGGCATTTTCTCCTTCCTGGGAACA | + |
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Preference number: 3 (lower is better) Translates to: LTGQGVVRSGNS*AHAGIFSFLGT Trigger: TGTTCCCAGGAAGGAGAAAATGCCTGCATGAGCTCAGCTGTTACCACTGCGTACCACACCCTGACCAGTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 72 bp | AGGCACTTGTCCGCACAGGATCAAAGCCTTCTCTTGTaGCCTGAATTTCCAGATCCCCAGTGGGGATGTATG | + |
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Preference number: 3 (lower is better) Translates to: RHLSAQDQSLLL*PEFPDPQWGCM Trigger: CATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGCTTTGATCCTGTGCGGACAAGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CCA 72 bp | TATTCTTCCTTGAGGTGCTGTGTGGACTGTGCTGGTTaGTCTCCAGCTAGGAGGTGGCACTTGCAAAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: YSSLRCCVDCAG*SPARRWHLQKS Trigger: GCTCTTTTGCAAGTGCCACCTCCTAGCTGGAGACCAACCAGCACAGTCCACACAGCACCTCAAGGAAGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR CAA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCAGCTACCATGGTGACTaGTCTGAAGAACCTGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSSYHGD*SEEPGK Trigger: TTTCCCAGGTTCTTCAGACAAGTCACCATGGTAGCT...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR CAA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCCCAGCACCTATGCAGTaGGCAAGGCTATTTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSPAPMQ*ARLFSF Trigger: GAATGAAAATAGCCTTGCCAACTGCATAGGTGCTGG...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR CAA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCGCCCCTGTACTTGTTTaGTCATTTTGTGATATCTCT | + |
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Preference number: 3 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSAPVLV*SFCDIS Trigger: AGAGATATCACAAAATGACAAAACAAGTACAGGGGC...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATGGGCTTTGCTGTAGCTaGCTGAAATCACCAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYGLCCS*LKSPSR Trigger: CCTGCTTGGTGATTTCAGCAAGCTACAGCAAAGCCC...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR TCA 72 bp | AGGTACCTAATCAACCAAGAACTCTCTTACAGAGGTTaGAAGAGATTACTGTTCTTTCCATGCCTGCTAACA | + |
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Preference number: 3 (lower is better) Translates to: RYLINQELSYRG*KRLLFFPCLLT Trigger: TGTTAGCAGGCATGGAAAGAACAGTAATCTCTTTCAACCTCTGTAAGAGAGTTCTTGGTTGATTAGGTACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGAAGCACCAGCTCTGATTaGGGTGGCAGGGGAGTGACG | + |
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Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGSTSSD*GGRGVT Trigger: CGTCACTCCCCTGCCACCTCAATCAGAGCTGGTGCT...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGAGGGCATCTGTCTGGGTaGCTCCATCTCCTCCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGGHLSG*LHLLRA Trigger: TGCACGGAGGAGATGGAGGCACCCAGACAGATGCCC...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGACATGGGGCATCTGTCTaGGTGCCTCCATCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGHGASV*VPPSPP Trigger: CGGAGGAGATGGAGGCACCCAGACAGATGCCCCATG...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGATACCAGCACCAGCTCTaGTTGAGGTGGCAGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGYQHQL*LRWQGS Trigger: ACTCCCCTGCCACCTCAATCAGAGCTGGTGCTGGTA...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGAGTCTGCCCACAAGGCTaGACACCCAGCTTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGVCPQG*TPSFCA Trigger: AGCACAGAAGCTGGGTGTCCAGCCTTGTGGGCAGAC...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | AGCCCAGGCATTATGCAACACATGACTGTCATTGGTGACAGGGAAGGAGTCACTGTGAGCGCCAAGGGGTaGTTCTCAGGCTGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGIMQHMTVIGDREGVTVSAKG*FSGCWG Trigger: ACCCCAGCAGCCTGAGAACCACCCCTTGGCGCTCAC...AGTGACTCCTTCCCTGTCACCAATGACAGTCATGTGTTGCATAATGCCTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGAGTGGACTGTGCTGGTTaGTCTCCAGCTAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGVDCAG*SPARRW Trigger: CCACCTCCTAGCTGGAGACCAACCAGCACAGTCCAC...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCTTGGATAAGGCAGGCTaGAGCCCCTGTGAGCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSLDKAG*SPCERQ Trigger: TTGGCGCTCACAGGGGCTGCAGCCTGCCTTATCCAA...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGACTCAAGACCTCTGACTaGTCAGGGTGTGGTACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGLKTSD*SGCGTQ Trigger: CTGCGTACCACACCCTGACCAGTCAGAGGTCTTGAG...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCGCTTCAGGATGTCCATaGGGCATCTGTCTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSASGCP*GICLGA Trigger: GGCACCCAGACAGATGCCCCATGGACATCCTGAAGC...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGACTAGGAGGTGGCACTTaGAAAAGAGCACCAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGLGGGT*KRAPAV Trigger: CACAGCTGGTGCTCTTTTGCAAGTGCCACCTCCTAG...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| CDS-3UTR GCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCCCTTCTGTTCCTGGCTaGGCTCTCATGTGTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSPSVPG*ALMCVQ Trigger: CTGCACACACATGAGAGCGCAGCCAGGAACAGAAGG...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGATGGGGATGTATGCTCTaGAGTGAACTCTCTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGWGCML*SELSPL Trigger: GAGGGGAGAGAGTTCACTCCAGAGCATACATCCCCA...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CAA 72 bp | TCAAGGCACTTGTCCGCACAGGATCAAAGCCTTCTCTaGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SRHLSAQDQSLL*WPEFPDPQWGC Trigger: ACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGCTTTGATCCTGTGCGGACAAGTGCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGATTTCCAGATCCCCAGTaGGGATGTATGCTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGFPDPQ*GCMLWS Trigger: ACTCCAGAGCATACATCCCCACTGGGGATCTGGAAA...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | AGCCCAGGCATTATGCAACACATGACTGTCATTGGTGACAGGGAAGGAGTCACTCGCAGTGGTAACAGCTaGGCTCATGCAGGCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGIMQHMTVIGDREGVTRSGNS*AHAGIF Trigger: GAAAATGCCTGCATGAGCTCAGCTGTTACCACTGCG...AGTGACTCCTTCCCTGTCACCAATGACAGTCATGTGTTGCATAATGCCTGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGACTGGCCAATGGGCTTTaGTGTAGCTTGCTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGLANGL*CSLLKS Trigger: TGATTTCAGCAAGCTACAGCAAAGCCCATTGGCCAG...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| CDS-3UTR GCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCACACTGCCTCCCATCTaGCATCTGGTACTTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSTLPPI*HLVLFS Trigger: GGAGAAAAGTACCAGATGGCAGATGGGAGGCAGTGT...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCATCATGTCCCCACCATaGCACAGTTGCCTAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSIMSPP*HSCLTK Trigger: CTTTGTTAGGCAACTGTGTCATGGTGGGGACATGAT...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGACAGCACCTATGCAGTTaGCAAGGCTATTTTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGQHLCS*QGYFHS Trigger: GGAATGAAAATAGCCTTGCCAACTGCATAGGTGCTG...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGATCCTTTCATTCAACCTaGATTCCTCCCTTCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGSFHST*IPPFSI Trigger: AATGCTGAAGGGAGGAATTCAGGTTGAATGAAAGGA...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGCCGACTCAAGACCTCTaGCTGGTCAGGGTGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMPTQDL*LVRVWY Trigger: GTACCACACCCTGACCAGTCAGAGGTCTTGAGTCGG...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGCCCAGGCATTATGCAACACATGACTGTCATTGGTGACAGGGAAGGAGTCACTACTTTTAGGAACCTCTaGAGGCGCATAGGTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGIMQHMTVIGDREGVTTFRNL*RRIGAK Trigger: TTTGGCACCTATGCGCCTGCAGAGGTTCCTAAAAGT...AGTGACTCCTTCCCTGTCACCAATGACAGTCATGTGTTGCATAATGCCTGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGGTTCGGGTCCACCCATaGTTCTTCTCGGTGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMVRVHP*FFSVGS Trigger: GGATCCCACCGAGAAGAACCATGGGTGGACCCGAAC...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| CDS-3UTR CCA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGAGCTACCAGGATGGGTaGATGGGTACCACCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMSYQDG*MGTTSG Trigger: CCCACTGGTGGTACCCATCCACCCATCCTGGTAGCT...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGGGTAGCAGTGGGATTTaGGCTTGCCCTAAGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMGSSGI*ACPKLP Trigger: GGGCAACTTAGGGCAAGCTCAAATCCCACTGCTACC...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATGGCCTGGGCTCCGCCTaGATGTTGCCCAGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYGLGSA*MLPSPS Trigger: AGAAGGACTGGGCAACATTCAGGCGGAGCCCAGGCC...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAGGGTGGTTCTCAGGCTaGTGGGGTAATGTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEGWFSG*WGNVPE Trigger: CTCTGGAACATTACCCCAGCAGCCTGAGAACCACCC...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGCCTCCATCTCCTCCGTaGAGTTCTTCATCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMPPSPP*SSSSSS Trigger: GCTGGAGGATGAAGAACTGCACGGAGGAGATGGAGG...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAACAAGTCTCCCAGCAGTaGATACCAGCACCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEQVSQQ*IPAPAL Trigger: CAGAGCTGGTGCTGGTATCCACTGCTGGGAGACTTG...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAACCTTCTCTTGTGGCCTaGATTTCCAGATCCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEPSLVA*ISRSPV Trigger: CACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGG...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATGCGCTCTCATGTGTGTaGAGGGCAGTGAGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYALSCV*RAVRQL Trigger: GAGCTGCCTCACTGCCCTGCACACACATGAGAGCGC...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGAGAGAAGTGTTTCTTATaGATGAGCAAGAAAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGEKCFL*MSKKSG Trigger: ACCACTTTTCTTGCTCATCCATAAGAAACACTTCTC...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCATTGCACCAAAGCTTTaGAGTGTAGAATATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSIAPKL*SVEYVF Trigger: GAAGACATATTCTACACTTCAAAGCTTTGGTGCAAT...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGCCCAGGCATTATGCAACACATGACTGTCATTGGTGACAGGGAAGGAGTCACTAGTGGAGAAAGTAATTaGAGATGTGGTGGAAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGIMQHMTVIGDREGVTSGESN*RCGGNS Trigger: GCTATTTCCACCACATCTGCAATTACTTTCTCCACT...AGTGACTCCTTCCCTGTCACCAATGACAGTCATGTGTTGCATAATGCCTGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGCCCAGGCATTATGCAACACATGACTGTCATTGGTGACAGGGAAGGAGTCACTTTACTGTTCTTTCCATaGCTGCTAACACAACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGIMQHMTVIGDREGVTLLFFP*LLTQHA Trigger: TGCATGTTGTGTTAGCAGGCATGGAAAGAACAGTAA...AGTGACTCCTTCCCTGTCACCAATGACAGTCATGTGTTGCATAATGCCTGGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATGAGGCATGCTCACACTaGCTCCCATCTGCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYEACSH*LPSAIW Trigger: CCAGATGGCAGATGGGAGGCAGTGTGAGCATGCCTC...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAGACACCCAGCTTCTGTaGTCATATCTGCCATGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEDTQLL*SYLPCT Trigger: AGTGCATGGCAGATATGAGCACAGAAGCTGGGTGTC...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATGCTCCGCCTGAATGTTaGCCAGTCCTTCTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYAPPEC*PVLLFL Trigger: CAGGAACAGAAGGACTGGGCAACATTCAGGCGGAGC...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGCCCTCCTGGATGACTTaGAGGAATGCAAGATTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMPSWMT*RNARFQ Trigger: CTGAAATCTTGCATTCCTCCAAGTCATCCAGGAGGG...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGTTTAGAAAATTGGCCTaGGCTCCGCCTGAATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMFRKLA*APPECC Trigger: GCAACATTCAGGCGGAGCCCAGGCCAATTTTCTAAA...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAACTATTTATTCTTCCTTaGGGTGCTGTGTGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEELFILP*GAVWTV Trigger: CACAGTCCACACAGCACCTCAAGGAAGAATAAATAG...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATGTGTGCTGGCTTTCTTaGATGCTGGTTATGCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYVCWLS*MLVMRA Trigger: CGCTCGCATAACCAGCATTCAAGAAAGCCAGCACAC...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATCCCAGTGGGGATGTATaGTCTGGAGTGAACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYPSGDV*SGVNSL Trigger: GAGAGAGTTCACTCCAGAGCATACATCCCCACTGGG...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATTACATCCAGGCAGTCTaGGCACAGAACTCTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYYIQAV*AQNSDQ Trigger: CTGGTCAGAGTTCTGTGCGCAGACTGCCTGGATGTA...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| CDS-3UTR CCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAACGTTGTAAACACTGTTaGAAAGGCAGCGAAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEERCKHC*KGSEGF Trigger: GAATCCTTCGCTGCCTTTCCAACAGTGTTTACAACG...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| CDS-3UTR CCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGTCTCCAGCTAGGAGGTaGCACTTGCAAAAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLSPARR*HLQKST Trigger: GGTGCTCTTTTGCAAGTGCCACCTCCTAGCTGGAGA...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| 3UTR CAA 72 bp | GTGACAGGAGGGCAAAACATTTACTTGAACAGGAGTTaGAAAGAAGTGAATTCAACCCTCCTGGATGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTGGQNIYLNRS*KEVNSTLLDDL Trigger: CAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAAGTAAATGTTTTGCCCTCCTGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
||
| 3UTR CAA 72 bp | AGCCATTTATTTAACTCATATTCCATGTTTAGAAAATaGGCCTGGGCTCCGCCTGAATGTTGCCCAGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SHLFNSYSMFRK*AWAPPECCPVL Trigger: AAGGACTGGGCAACATTCAGGCGGAGCCCAGGCCAATTTTCTAAACATGGAATATGAGTTAAATAAATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAATGGCCATGGTTTACATaGGATTTCTTTGAGACATGC | + |
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Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEWPWFT*DFFETC Trigger: GCATGTCTCAAAGAAATCTCATGTAAACCATGGCCA...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGGGGCCGCTTACAGCTTaGAGTGAGTTCTCAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLGPLTA*SEFSDN Trigger: ATTGTCTGAGAACTCACTGCAAGCTGTAAGCGGCCC...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGGCATTATGCAACACATaGCTGTCATTGGTGACAGGG | + |
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Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLALCNT*LSLVTG Trigger: CCCTGTCACCAATGACAGTCATGTGTTGCATAATGC...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGAACATTCATGATTCGTaGCAGGAGGGCAAAACATTT | + |
|
Preference number: 4 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMNIHDS*QEGKTF Trigger: AAATGTTTTGCCCTCCTGTCACGAATCATGAATGTT...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGTGGAATTCAAACACCTaGACGTTCTGTCTGATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLWNSNT*TFCLMR Trigger: GCGCATCAGACAGAACGTGCAGGTGTTTGAATTCCA...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAGATGACTTGGAGGAATaGAAGATTTCAGTGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEDDLEE*KISVEK Trigger: TTTCTCCACTGAAATCTTGCATTCCTCCAAGTCATC...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAGATCTTTCCCCTCCCTaGCTAACTATATTACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEDLSPP*LTILQH Trigger: ATGTTGTAATATAGTTAGCCAGGGAGGGGAAAGATC...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGACACTAATCTCCAAGTaGGAGAGGCATGCTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLTLISK*ERHAHT Trigger: AGTGTGAGCATGCCTCTCCCACTTGGAGATTAGTGT...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGCAAAGCCTTCTCTTGTaGCCTGAATTTCCAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLQSLLL*PEFPDP Trigger: GGGATCTGGAAATTCAGGCCACAAGAGAAGGCTTTG...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAACTCTCTTACAGAGGTTaGAAGAGATTACTGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEELSYRG*KRLLFF Trigger: AAAGAACAGTAATCTCTTTCAACCTCTGTAAGAGAG...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGCTGGTCGATGGGAATTaGACCAAAGCTTTGAAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLLVDGN*TKALKC Trigger: ACACTTCAAAGCTTTGGTGCAATTCCCATCGACCAG...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAATTCAAATTGGAGCTTaGAAGTTACTGAATGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEIQIGA*KLLNAC Trigger: GCAAGCATTCAGTAACTTGCAAGCTCCAATTTGAAT...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGGATCACTTCCTCACCTaGCTTTACAGACACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLDHFLT*LYRHWK Trigger: TTTCCAGTGTCTGTAAAGCCAGGTGAGGAAGTGATC...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CAA 72 bp | AAGGTACCTAATCAACCAAGAACTCTCTTACAGAGGTaGAAAGAGATTACTGTTCTTTCCATGCCTGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVPNQPRTLLQR*KEITVLSMPAN Trigger: GTTAGCAGGCATGGAAAGAACAGTAATCTCTTTCAACCTCTGTAAGAGAGTTCTTGGTTGATTAGGTACCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGCCTGCTAACACAACATaGATTCTGTTTCCCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLPANTT*ILFPMD Trigger: ATCCATGGGAAACAGAATGCATGTTGTGTTAGCAGG...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CAA 72 bp | AGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTaGGAGGAATGCAAGATTTCAGTGGAGAAAGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLKEVNSTLLDD*EECKISVEKVI Trigger: AATTACTTTCTCCACTGAAATCTTGCATTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR TCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGAGTGTTTCTTATGGATaGGCAAGAAAAGTGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLSVSYG*ARKVVW Trigger: CCAAACCACTTTTCTTGCTCATCCATAAGAAACACT...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGGGAAGGAGTCACTTGTaGCATTTTCAATGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLGRSHL*HFQCFP Trigger: AGGAAAACATTGAAAATGGCACAAGTGACTCCTTCC...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR GCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATGAGTTTAATTGCCTCTaGTGCACAGAAGAGTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYEFNCL*CTEEFK Trigger: TTTGAACTCTTCTGTGCAGCAGAGGCAATTAAACTC...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CCA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATGATGAGCAAGAAAAGTaGTTTGGTGAAATGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYDEQEK*FGEMDF Trigger: GAAATCCATTTCACCAAACCACTTTTCTTGCTCATC...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| 3UTR CAA 72 bp | AACATGGAGATGCAGAGTTCACATTGTGATCTTCTATaGCAGAATTTGGAGGAAAAATCTGAGCTAGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NMEMQSSHCDLL*QNLEEKSELEI Trigger: TATTTCTAGCTCAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCTCCATGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGATGCCTGTACGTAATGTaGAATAGCTTGCCGTGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGCLYVM*NSLPCA Trigger: GGCGCACGGCAAGCTATTCAACATTACGTACAGGCA...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | AGCCCAGGCATTATGCAACACATGACTGTCATTGGTGACAGGGAAGGAGTCACTGGGCTTTGCTGTAGCTaGCTGAAATCACCAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGIMQHMTVIGDREGVTGLCCS*LKSPSR Trigger: CCTGCTTGGTGATTTCAGCAAGCTACAGCAAAGCCC...AGTGACTCCTTCCCTGTCACCAATGACAGTCATGTGTTGCATAATGCCTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGATCTATTTATTCTTCCTaGAGGTGCTGTGTGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGSIYSS*RCCVDC Trigger: ACAGTCCACACAGCACCTCAAGGAAGAATAAATAGA...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | TGTATCTTTGTGTTAAGCTACCAGGATGGGTGGATGGGTACCACCAGTGGGTCCGCTTCAATTGCCAATTaGGTGGCCTCTAAAGCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CIFVLSYQDGWMGTTSGSASIAN*VASKAL Trigger: TAAAGCTTTAGAGGCCACCAAATTGGCAATTGAAGC...GGACCCACTGGTGGTACCCATCCACCCATCCTGGTAGCTTAACACAAAGATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAGCTAGGAGGTGGCACTaGCAAAAGAGCACCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEARRWH*QKSTSC Trigger: ACAGCTGGTGCTCTTTTGCAAGTGCCACCTCCTAGC...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | GCCTTCTCTTGTGGCCTGAATTTCCAGATCCCCAGTGGGGATGTATGCTCTGGACTTCTATTGCAGAATTaGGAGGAAAAATCTGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: AFSCGLNFQIPSGDVCSGLLLQN*EEKSEL Trigger: TAGCTCAGATTTTTCCTCCAAATTCTGCAATAGAAG...TCCAGAGCATACATCCCCACTGGGGATCTGGAAATTCAGGCCACAAGAGAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | AGCCCAGGCATTATGCAACACATGACTGTCATTGGTGACAGGGAAGGAGTCACTCAGGGAAGGAGTCACTaGTGCCATTTTCAATGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPGIMQHMTVIGDREGVTQGRSH*CHFQCF Trigger: AAAACATTGAAAATGGCACAAGTGACTCCTTCCCTG...AGTGACTCCTTCCCTGTCACCAATGACAGTCATGTGTTGCATAATGCCTGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | TTGAACAGGAGTTTGAAAGAAGTGAATTCAACCCTCCTGGATGACTTGGAGGAAGATCAAAGCCTTCTCTaGTGGCCTGAATTTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LNRSLKEVNSTLLDDLEEDQSLL*WPEFPD Trigger: ATCTGGAAATTCAGGCCACAAGAGAAGGCTTTGATC...TTCCTCCAAGTCATCCAGGAGGGTTGAATTCACTTCTTTCAAACTCCTGTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATAGCTACCATGGTGACTaGTCTGAAGAACCTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYSYHGD*SEEPGK Trigger: TTTCCCAGGTTCTTCAGACAAGTCACCATGGTAGCT...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | GGAAAGGCAGCGAAGGATTCAGAATATTACAGAAGCATAGTTGATAAGGCCATGGCCCCTGTACTTGTTTaGTCATTTTGTGATATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GKAAKDSEYYRSIVDKAMAPVLV*SFCDIS Trigger: AGAGATATCACAAAATGACAAAACAAGTACAGGGGC...CATGGCCTTATCAACTATGCTTCTGTAATATTCTGAATCCTTCGCTGCCTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | AGATGCAGAGTTCACATTGTGATCTTCTATTGCAGAATTTGGAGGAAAAATCTGCCAGCACCTATGCAGTaGGCAAGGCTATTTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RCRVHIVIFYCRIWRKNLPAPMQ*ARLFSF Trigger: GAATGAAAATAGCCTTGCCAACTGCATAGGTGCTGG...CAGATTTTTCCTCCAAATTCTGCAATAGAAGATCACAATGTGAACTCTGCATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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| CDS-3UTR CAA 90 bp | AGGAGTCACTTGTGCCATTTTCAATGTTTTCCTACCAGGTTTATAGCTTTCTATACTCTCTTACAGAGGTaGAAAGAGATTACTGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSHLCHFQCFPTRFIAFYTLLQR*KEITVL Trigger: AAGAACAGTAATCTCTTTCAACCTCTGTAAGAGAGT...ATAGAAAGCTATAAACCTGGTAGGAAAACATTGAAAATGGCACAAGTGACTCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380872.9 |
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