Pregenerated sensors for AKR1B1 (Homo sapiens)
Ensembl gene IDs: ENSG00000085662Ensembl transcript IDs: ENST00000426422.1, ENST00000434222.5, ENST00000462784.1, ENST00000465351.5, ENST00000467251.1, ENST00000467829.1, ENST00000487438.5, ENST00000491741.5, ENST00000497983.5, ENST00000498373.1, ENST00000498771.5
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGTCACAGCTAGCAACAGGTAGGCGACGCATTCAGGTCCAGATCTaGCTCCAGAGTCCTGCGCTAGCCACTGTGCCACACGCTTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RSQLATGRRRIQVQI*LQSPALATVPHASV Trigger: CACTGAAGCGTGTGGCACAGTGGCTAGCGCAGGACTCTGGAGTCAGATCTGGACCTGAATGCGTCGCCTACCTGTTGCTAGCTGTGACCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR TCA 90 bp | ACTGTGCCACACGCTTCAGTGTCTCAGGCATATCATGAGACCACATaGGGCCCTCCACTGGCTAGAAATGCACACTACCACTCAGGAGAA | + |
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Preference number: 1 (lower is better) Translates to: TVPHASVSQAYHETT*GPPLARNAHYHSGE Trigger: TTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATATGCCTGAGACACTGAAGCGTGTGGCACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR CCA 90 bp | CTTCAGTGTCTCAGGCATATCATGAGACCACATGAGGCCCTCCACTaGCTAGAAATGCACACTACCACTCAGGAGAAAGAACATTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: LQCLRHIMRPHEALH*LEMHTTTQEKEHSL Trigger: CAGGGAATGTTCTTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATATGCCTGAGACACTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR-3UTR GCA 90 bp | AGACCACATGAGGCCCTCCACTGGCTAGAAATGCACACTACCACTCAGGAGAAACGTGGCAGTCACCCTTaGAGTAGTGGGGGCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: RPHEALHWLEMHTTTQEKRGSHP*SSGGRH Trigger: GTGCCTGCCCCCACTACTGCAAGGGTGACTGCCACG...TTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTCATGTGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCCTCCACTGGCTAGAAATGCACACTACCACTCAGGAGAAAGAACATTCCGAGGTTCCACATGAATaGACAAGCGCTGGCCCTCGT | + |
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Preference number: 2 (lower is better) Translates to: EALHWLEMHTTTQEKEHSEVPHE*TSAGPR Trigger: ACGAGGGCCAGCGCTTGTTCATTCATGTGGAACCTC...GGAATGTTCTTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGTCCTGCGCTAGCCACTGTGCCACACGCTTCAGTGTCTCAGGCATATCAAGAAAGAACATTCCCTaGACGGCTAAGAGCTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: PESCASHCATRFSVSGISRKNIP*TAKSSY Trigger: GTAAGAGCTCTTAGCCGTGCAGGGAATGTTCTTTCT...TGATATGCCTGAGACACTGAAGCGTGTGGCACAGTGGCTAGCGCAGGACTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGTGTCTCAGGCATATCATGAGACCACATGAGGCCCTCCACTGGCTAGAATTTCCACTCTGTACTTaGGGACCCCTAACCATACTT | + |
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Preference number: 2 (lower is better) Translates to: LQCLRHIMRPHEALHWLEFPLCT*GPLTIL Trigger: AAGTATGGTTAGGGGTCCTCAAGTACAGAGTGGAAA...TTCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATATGCCTGAGACACTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR TCA 72 bp | CACGCTTCAGTGTCTCAGGCATATCATGAGACCACATaGGGCCCTCCACTGGCTAGAAATGCACACTACCAC | + |
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Preference number: 3 (lower is better) Translates to: HASVSQAYHETT*GPPLARNAHYH Trigger: GTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATATGCCTGAGACACTGAAGCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR TCA 72 bp | AGCTCTTACATTTGTACAGATGAGGTTCCACATGAATaGACAAGCGCTGGCCCTCGTGGCAGTCACCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SSYICTDEVPHE*TSAGPRGSHPC Trigger: GCAAGGGTGACTGCCACGAGGGCCAGCGCTTGTTCATTCATGTGGAACCTCATCTGTACAAATGTAAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR-3UTR CAA 90 bp | GGCCCTCCACTGGCTAGAAATGCACACTACCACTCAGGAGAAAGAACATTCCCTCTTTCCACTCTGTACTaGAGGACCCCTAACCATACT | + |
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Preference number: 3 (lower is better) Translates to: GPPLARNAHYHSGERTFPLSTLY*RTPNHT Trigger: AGTATGGTTAGGGGTCCTCAAGTACAGAGTGGAAAG...AGGGAATGTTCTTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| 3UTR CCA 72 bp | CTCAGGCATATCATGAGACCACATGAGGCCCTCCACTaGCTAGAAATGCACACTACCACTCAGGAGAAAGAA | + |
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Preference number: 3 (lower is better) Translates to: LRHIMRPHEALH*LEMHTTTQEKE Trigger: TTCTTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATATGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR GCA 90 bp | CCAGAGTCCTGCGCTAGCCACTGTGCCACACGCTTCAGTGTCTCAGGCATATCACGTGGCAGTCACCCTTaGAGTAGTGGGGGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PESCASHCATRFSVSGISRGSHP*SSGGRH Trigger: GTGCCTGCCCCCACTACTGCAAGGGTGACTGCCACG...TGATATGCCTGAGACACTGAAGCGTGTGGCACAGTGGCTAGCGCAGGACTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR GCA 90 bp | CAGTGTCTCAGGCATATCATGAGACCACATGAGGCCCTCCACTGGCTAGAAATGGAGCAGGAGACGGCTTaGCATGGCTGCTGCGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: QCLRHIMRPHEALHWLEMEQETA*HGCCAP Trigger: GGGAGCGCAGCAGCCATGGCAAGCCGTCTCCTGCTC...CATTTCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATATGCCTGAGACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR GCA 90 bp | CCAGAGTCCTGCGCTAGCCACTGTGCCACACGCTTCAGTGTCTCAGGCATATCACTGACTCCAGAGTCCTaGGCTAGCCACTGTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PESCASHCATRFSVSGISLTPES*ASHCAT Trigger: TGTGGCACAGTGGCTAGCGCAGGACTCTGGAGTCAG...TGATATGCCTGAGACACTGAAGCGTGTGGCACAGTGGCTAGCGCAGGACTCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR TCA 90 bp | GTGGCAGTCACCCTTGCAGTAGTGGGGGCAGGCACTATTAATCTAAGAGCCCATTCTTGGCGCCGTTGTTaGGCAGGAGACGGCTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: VAVTLAVVGAGTINLRAHSWRRC*AGDGLP Trigger: TGGCAAGCCGTCTCCTGCTCAACAACGGCGCCAAGA...ATGGGCTCTTAGATTAATAGTGCCTGCCCCCACTACTGCAAGGGTGACTGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR TCA 90 bp | GAGGCCCTCCACTGGCTAGAAATGCACACTACCACTCAGGAGAAAGAACATTCCACGGTCAGCAACACCTaGAGTGGCTGTACCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: EALHWLEMHTTTQEKEHSTVSNT*SGCTWA Trigger: AGCCCAGGTACAGCCACTTCAGGTGTTGCTGACCGT...GGAATGTTCTTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR TCA 90 bp | GTGGCAGTCACCCTTGCAGTAGTGGGGGCAGGCACTATTAATCTAAGAGCCCATGAGGTTCCACATGAATaGACAAGCGCTGGCCCTCGT | + |
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Preference number: 4 (lower is better) Translates to: VAVTLAVVGAGTINLRAHEVPHE*TSAGPR Trigger: ACGAGGGCCAGCGCTTGTTCATTCATGTGGAACCTC...ATGGGCTCTTAGATTAATAGTGCCTGCCCCCACTACTGCAAGGGTGACTGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR CCA 90 bp | TTGAGGACCCCTAACCATACTTCCTGTGAGGGTGTAACAGGCTCAGTCACTTCCTACCCAACCCCAGGATaGGCATCTTGGCGCCGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LRTPNHTSCEGVTGSVTSYPTPG*ASWRRC Trigger: ACAACGGCGCCAAGATGCCCATCCTGGGGTTGGGTA...GGAAGTGACTGAGCCTGTTACACCCTCACAGGAAGTATGGTTAGGGGTCCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR TCA 90 bp | GGCCCTCCACTGGCTAGAAATGCACACTACCACTCAGGAGAAAGAACATTCCCTGTCTCAGGCATATCATaGGACCACATGAGGCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: GPPLARNAHYHSGERTFPVSGIS*DHMRPS Trigger: GGAGGGCCTCATGTGGTCTCATGATATGCCTGAGAC...AGGGAATGTTCTTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR TCA 90 bp | CTGGCCCTCGTGGCAGTCACCCTTGCAGTAGTGGGGGCAGGCACTATTAATCTATTTCCACTCTGTACTTaGGGACCCCTAACCATACTT | + |
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Preference number: 4 (lower is better) Translates to: LALVAVTLAVVGAGTINLFPLCT*GPLTIL Trigger: AAGTATGGTTAGGGGTCCTCAAGTACAGAGTGGAAA...TAGATTAATAGTGCCTGCCCCCACTACTGCAAGGGTGACTGCCACGAGGGCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR TCA 90 bp | TCTAAGAGCCCATGCCAGAGTCTTCTAAAACCCCGATCTGTGCCCTTTCCACTCTATCATGAGACCACATaGGGCCCTCCACTGGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: SKSPCQSLLKPRSVPFPLYHETT*GPPLAR Trigger: TCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATA...GAGTGGAAAGGGCACAGATCGGGGTTTTAGAAGACTCTGGCATGGGCTCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR CCA 90 bp | CAGTGTCTCAGGCATATCATGAGACCACATGAGGCCCTCCACTGGCTAGAAATGCAGCAACACCTGAAGTaGCTGTACCTGGGCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: QCLRHIMRPHEALHWLEMQQHLK*LYLGCS Trigger: ACTACAGCCCAGGTACAGCCACTTCAGGTGTTGCTG...CATTTCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATATGCCTGAGACACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR CCA 90 bp | TTTGTACAGATGAGGTTCCACATGAATGAACAAGCGCTGGCCCTCGTGGCAGTCCATGAGGCCCTCCACTaGCTAGAAATGCACACTACC | + |
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Preference number: 4 (lower is better) Translates to: FVQMRFHMNEQALALVAVHEALH*LEMHTT Trigger: GGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTCATG...GACTGCCACGAGGGCCAGCGCTTGTTCATTCATGTGGAACCTCATCTGTACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR GCA 90 bp | GTGGCAGTCACCCTTGCAGTAGTGGGGGCAGGCACTATTAATCTAAGAGCCCATAGAAAGAACATTCCCTaGACGGCTAAGAGCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: VAVTLAVVGAGTINLRAHRKNIP*TAKSSY Trigger: GTAAGAGCTCTTAGCCGTGCAGGGAATGTTCTTTCT...ATGGGCTCTTAGATTAATAGTGCCTGCCCCCACTACTGCAAGGGTGACTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR GCA 90 bp | TACCACTCAGGAGAAAGAACATTCCCTGCACGGCTAAGAGCTCTTACATTTGTACAGGACTGTCAGGAATaGAGGCAGTTGTGGACGGTC | + |
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Preference number: 4 (lower is better) Translates to: YHSGERTFPARLRALTFVQDCQE*RQLWTV Trigger: GACCGTCCACAACTGCCTGCATTCCTGACAGTCCTG...TACAAATGTAAGAGCTCTTAGCCGTGCAGGGAATGTTCTTTCTCCTGAGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS CCA 90 bp | CTGAGGTGCCTGCTGCTCAGAGGGAGGGCCTGTTTTGGAGCCATGTaGCTTACCAGGTCAGAGCCGGGACTGTCTCAAACCTCAGCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LRCLLLRGRACFGAM*LTRSEPGLSQTSAP Trigger: TGGGGCTGAGGTTTGAGACAGTCCCGGCTCTGACCTGGTAAGCCACATGGCTCCAAAACAGGCCCTCCCTCTGAGCAGCAGGCACCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS-3UTR CAA 90 bp | CTGGCCCTCGTGGCAGTCACCCTTGCAGTAGTGGGGGCAGGCACTATTAATCTAATCTTGGCGCCGTTGTaGAGCAGGAGACGGCTTGCC | + |
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Preference number: 5 (lower is better) Translates to: LALVAVTLAVVGAGTINLILAPL*SRRRLA Trigger: GGCAAGCCGTCTCCTGCTCAACAACGGCGCCAAGAT...TAGATTAATAGTGCCTGCCCCCACTACTGCAAGGGTGACTGCCACGAGGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS TCA 90 bp | TCAGCCTCATCAGCACGGGACTCTAAGCAATGGGCCCAGATGGAATaGCCATTCAACAGAGAGCCAAGGATGGGCGAGCTCTGGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: SASSARDSKQWAQME*PFNREPRMGELWSP Trigger: AGGGCTCCAGAGCTCGCCCATCCTTGGCTCTCTGTTGAATGGTCATTCCATCTGGGCCCATTGCTTAGAGTCCCGTGCTGATGAGGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462784.1 |
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| CDS CCA 90 bp | CAACCTCAGCCTCATCAGCACGGGACTCTAAGCAATGGGCCCAGATaGAATGACCATTCAACAGAGAGCCAAGGATGGGCGAGCTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QPQPHQHGTLSNGPR*NDHSTESQGWASSG Trigger: TCCAGAGCTCGCCCATCCTTGGCTCTCTGTTGAATGGTCATTCCATCTGGGCCCATTGCTTAGAGTCCCGTGCTGATGAGGCTGAGGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462784.1 |
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| CDS CCA 90 bp | GCCTGCAGGGATCACTCTCTTGCTGTGCAGCATCTGAATATCTCCTaGGAACTGCTCCTCACACTGGGGCTCACTCACCTCAACAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: ACRDHSLAVQHLNIS*ELLLTLGLTHLNKA Trigger: TGCCTTGTTGAGGTGAGTGAGCCCCAGTGTGAGGAGCAGTTCCCAGGAGATATTCAGATGCTGCACAGCAAGAGAGTGATCCCTGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS-3UTR CAA 90 bp | GGCCCTCCACTGGCTAGAAATGCACACTACCACTCAGGAGAAAGAACATTCCCTGGCATCTTGGCGCCGTaGTTGAGCAGGAGACGGCTT | + |
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Preference number: 5 (lower is better) Translates to: GPPLARNAHYHSGERTFPGILAP*LSRRRL Trigger: AAGCCGTCTCCTGCTCAACAACGGCGCCAAGATGCC...AGGGAATGTTCTTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR CAA 90 bp | CAGTGTCTCAGGCATATCATGAGACCACATGAGGCCCTCCACTGGCTAGAAATGCAGGAATGCAGGCAGTaGTGGACGGTCAGCAACACC | + |
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Preference number: 5 (lower is better) Translates to: QCLRHIMRPHEALHWLEMQECRQ*WTVSNT Trigger: GGTGTTGCTGACCGTCCACAACTGCCTGCATTCCTG...CATTTCTAGCCAGTGGAGGGCCTCATGTGGTCTCATGATATGCCTGAGACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS-3UTR CAA 90 bp | CAGATGAGGTTCCACATGAATGAACAAGCGCTGGCCCTCGTGGCAGTCACCCTTAGTCACTTCCTCCTCTaGGCTAACAGGACTGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: QMRFHMNEQALALVAVTLSHFLL*ANRTVR Trigger: CCTGACAGTCCTGTTAGCCAAGAGGAGGAAGTGACT...AAGGGTGACTGCCACGAGGGCCAGCGCTTGTTCATTCATGTGGAACCTCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS CCA 90 bp | CATACTTCCTGTGAGGGTGTAACAGGCTCAGTCACTTCCTCCTCTTaGCTAACAGGACTGTCAGGAATGCAGGCAGTTGTGGACGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: HTSCEGVTGSVTSSS*LTGLSGMQAVVDGQ Trigger: CTGACCGTCCACAACTGCCTGCATTCCTGACAGTCCTGTTAGCCAAGAGGAGGAAGTGACTGAGCCTGTTACACCCTCACAGGAAGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000434222.5 ENST00000465351.5 ENST00000498771.5 |
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| CDS TCA 90 bp | GTAATGTGCAAAGCAAGAACAGCTGTGACGAGAGCACATTGGCGCTaGGGCCTGCAGGGATCACTCTCTTGCTGTGCAGCATCTGAATAT | + |
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Preference number: 5 (lower is better) Translates to: VMCKARTAVTRAHWR*GLQGSLSCCAASEY Trigger: ATATTCAGATGCTGCACAGCAAGAGAGTGATCCCTGCAGGCCTCAGCGCCAATGTGCTCTCGTCACAGCTGTTCTTGCTTTGCACATTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS-3UTR CAA 90 bp | GTGGCAGTCACCCTTGCAGTAGTGGGGGCAGGCACTATTAATCTAAGAGCCCATCTTTCCACTCTGTACTaGAGGACCCCTAACCATACT | + |
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Preference number: 5 (lower is better) Translates to: VAVTLAVVGAGTINLRAHLSTLY*RTPNHT Trigger: AGTATGGTTAGGGGTCCTCAAGTACAGAGTGGAAAG...ATGGGCTCTTAGATTAATAGTGCCTGCCCCCACTACTGCAAGGGTGACTGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS GCA 90 bp | GAATGGAAAGCCAAAATATGTAGTTACTTCAGGCCAGGCCAACAATaGCCCAGGGCTGGAAGAAGATATCAAGAGCGGATCTCTTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: EWKAKICSYFRPGQQ*PRAGRRYQERISWH Trigger: ATGCCAAGAGATCCGCTCTTGATATCTTCTTCCAGCCCTGGGGCATTGTTGGCCTGGCCTGAAGTAACTACATATTTTGGCTTTCCATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS-3UTR CAA 90 bp | AGACCACATGAGGCCCTCCACTGGCTAGAAATGCACACTACCACTCAGGAGAAATACTTCAAGCCAGGTTaGTTTAAGATCATCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: RPHEALHWLEMHTTTQEKYFKPG*FKIIST Trigger: GGTGGAGATGATCTTAAACAAACCTGGCTTGAAGTA...TTTCTCCTGAGTGGTAGTGTGCATTTCTAGCCAGTGGAGGGCCTCATGTGGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434222.5 |
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| CDS TCA 90 bp | CTCTTCAGTGCCAGTGAATTAGACCTTTCAGAAGCTAAGAGACAGTaGGACGAAAGCCAGGCTGGCTTTAATGAGATAAGAAGAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: LFSASELDLSEAKRQ*DESQAGFNEIRRAN Trigger: GTTTGCTCTTCTTATCTCATTAAAGCCAGCCTGGCTTTCGTCTCACTGTCTCTTAGCTTCTGAAAGGTCTAATTCACTGGCACTGAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000491741.5 ENST00000498373.1 |
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| CDS CAA 90 bp | CGCCTGCGGTTGGCGCGCCGCTGCGCGAAGGAGCCTTCTGATTGGTaGCGCTGGGGGTGCCGCGGCGGCCTTCCCCAAGGGTCGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: RLRLARRCAKEPSDW*RWGCRGGLPQGSAG Trigger: CCCCGCCGACCCTTGGGGAAGGCCGCCGCGGCACCCCCAGCGCAACCAATCAGAAGGCTCCTTCGCGCAGCGGCGCGCCAACCGCAGGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000467829.1 ENST00000491741.5 ENST00000497983.5 |
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| CDS CCA 72 bp | CGCCGCTGCGCGAAGGAGCCTTCTGATTGGTTGCGCTaGGGGTGCCGCGGCGGCCTTCCCCAAGGGTCGGCG | + |
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Preference number: 6 (lower is better) Translates to: RRCAKEPSDWLR*GCRGGLPQGSA Trigger: CGCCGACCCTTGGGGAAGGCCGCCGCGGCACCCCCAGCGCAACCAATCAGAAGGCTCCTTCGCGCAGCGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000467829.1 ENST00000491741.5 ENST00000497983.5 |
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| CDS GCA 72 bp | TGGCGCGCCGCTGCGCGAAGGAGCCTTCTGATTGGTTaGGCTGGGGGTGCCGCGGCGGCCTTCCCCAAGGGT | + |
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Preference number: 6 (lower is better) Translates to: WRAAARRSLLIG*AGGAAAAFPKG Trigger: ACCCTTGGGGAAGGCCGCCGCGGCACCCCCAGCGCAACCAATCAGAAGGCTCCTTCGCGCAGCGGCGCGCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000467829.1 ENST00000491741.5 ENST00000497983.5 |
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| CDS GCA 72 bp | GGTCGGCAGAAAGGGCGCCTGCGGTTGGCGCGCCGCTaGGCGAAGGAGCCTTCTGATTGGTTGCGCTGGGGG | + |
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Preference number: 6 (lower is better) Translates to: GRQKGRLRLARR*AKEPSDWLRWG Trigger: CCCCCAGCGCAACCAATCAGAAGGCTCCTTCGCGCAGCGGCGCGCCAACCGCAGGCGCCCTTTCTGCCGACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000467829.1 ENST00000491741.5 ENST00000497983.5 |
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| CDS GCA 72 bp | GGTGCCGCGGCGGCCTTCCCCAAGGGTCGGCGGGGATaGTTCTTCCGCCTGGTCCTAGTGGCAGCGGATTCT | + |
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Preference number: 6 (lower is better) Translates to: GAAAAFPKGRRG*FFRLVLVAADS Trigger: AGAATCCGCTGCCACTAGGACCAGGCGGAAGAAGCATCCCCGCCGACCCTTGGGGAAGGCCGCCGCGGCACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467829.1 ENST00000491741.5 |
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| CDS CCA 72 bp | ATAGCCCGTGAGGTCGGCAGAAAGGGCGCCTGCGGTTaGCGCGCCGCTGCGCGAAGGAGCCTTCTGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: IAREVGRKGACG*RAAARRSLLIG Trigger: ACCAATCAGAAGGCTCCTTCGCGCAGCGGCGCGCCAACCGCAGGCGCCCTTTCTGCCGACCTCACGGGCTAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000467829.1 ENST00000491741.5 ENST00000497983.5 |
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| CDS TCA 72 bp | CAGTCACCTGCCCTGGAGGGGACTTTAAATAGCCCGTaGGGTCGGCAGAAAGGGCGCCTGCGGTTGGCGCGC | + |
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Preference number: 6 (lower is better) Translates to: QSPALEGTLNSP*GRQKGRLRLAR Trigger: GCGCGCCAACCGCAGGCGCCCTTTCTGCCGACCTCACGGGCTATTTAAAGTCCCCTCCAGGGCAGGTGACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000467829.1 ENST00000487438.5 ENST00000491741.5 ENST00000497983.5 |
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| CDS CCA 72 bp | CTGCTGCTCAGAGGGAGGGCCTGTTTTGGAGCCATGTaGCTTACCAGGTCAGAGCCGGGACTGTCTCAAACC | + |
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Preference number: 6 (lower is better) Translates to: LLLRGRACFGAM*LTRSEPGLSQT Trigger: GGTTTGAGACAGTCCCGGCTCTGACCTGGTAAGCCACATGGCTCCAAAACAGGCCCTCCCTCTGAGCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS CAA 90 bp | GGTACGTGCACCACAGCTAAGCCAGCGAGAGGGCACATGTCATCATaGCCAGCCACAAGGCAGCTTCCTGGCTTGCTGACGATGAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: GTCTTAKPARGHMSS*PATRQLPGLLTMKS Trigger: GCTCTTCATCGTCAGCAAGCCAGGAAGCTGCCTTGTGGCTGGCAATGATGACATGTGCCCTCTCGCTGGCTTAGCTGTGGTGCACGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426422.1 |
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| CDS CAA 72 bp | ACCACAGCTAAGCCAGCGAGAGGGCACATGTCATCATaGCCAGCCACAAGGCAGCTTCCTGGCTTGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: TTAKPARGHMSS*PATRQLPGLLT Trigger: CGTCAGCAAGCCAGGAAGCTGCCTTGTGGCTGGCAATGATGACATGTGCCCTCTCGCTGGCTTAGCTGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426422.1 |
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| CDS TCA 72 bp | GGAACCGGATCAGGACCTGTGAGCCCAAGGAGACAGTaGGTGTGTATACATGCCAGGCACTCGCACCCATCA | + |
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Preference number: 6 (lower is better) Translates to: GTGSGPVSPRRQ*VCIHARHSHPS Trigger: TGATGGGTGCGAGTGCCTGGCATGTATACACACTCACTGTCTCCTTGGGCTCACAGGTCCTGATCCGGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465351.5 |
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| CDS TCA 72 bp | AGGCCTGCAGGGATCACTCTCTTGCTGTGCAGCATCTaGATATCTCCTGGGAACTGCTCCTCACACTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RPAGITLLLCSI*ISPGNCSSHWG Trigger: GCCCCAGTGTGAGGAGCAGTTCCCAGGAGATATTCAGATGCTGCACAGCAAGAGAGTGATCCCTGCAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS TCA 72 bp | TCAGCACGGGACTCTAAGCAATGGGCCCAGATGGAATaGCCATTCAACAGAGAGCCAAGGATGGGCGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: SARDSKQWAQME*PFNREPRMGEL Trigger: GAGCTCGCCCATCCTTGGCTCTCTGTTGAATGGTCATTCCATCTGGGCCCATTGCTTAGAGTCCCGTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462784.1 |
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| CDS TCA 72 bp | AAAGCAAGAACAGCTGTGACGAGAGCACATTGGCGCTaGGGCCTGCAGGGATCACTCTCTTGCTGTGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: KARTAVTRAHWR*GLQGSLSCCAA Trigger: TGCTGCACAGCAAGAGAGTGATCCCTGCAGGCCTCAGCGCCAATGTGCTCTCGTCACAGCTGTTCTTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS CCA 72 bp | CCTCATCAGCACGGGACTCTAAGCAATGGGCCCAGATaGAATGACCATTCAACAGAGAGCCAAGGATGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PHQHGTLSNGPR*NDHSTESQGWA Trigger: CGCCCATCCTTGGCTCTCTGTTGAATGGTCATTCCATCTGGGCCCATTGCTTAGAGTCCCGTGCTGATGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462784.1 |
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| CDS GCA 72 bp | ACCTGTGAGCCCAAGGAGACAGTGAGTGTGTATACATaGCAGGCACTCGCACCCATCATCTCAGTCTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: TCEPKETVSVYT*QALAPIISVSH Trigger: GTGAGAGACTGAGATGATGGGTGCGAGTGCCTGGCATGTATACACACTCACTGTCTCCTTGGGCTCACAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465351.5 |
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| CDS CAA 72 bp | AATGTGCAAAGCAAGAACAGCTGTGACGAGAGCACATaGGCGCTGAGGCCTGCAGGGATCACTCTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: NVQSKNSCDEST*ALRPAGITLLL Trigger: CAGCAAGAGAGTGATCCCTGCAGGCCTCAGCGCCAATGTGCTCTCGTCACAGCTGTTCTTGCTTTGCACATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS CAA 90 bp | GCCCCAGGGCTGGAAGAAGATATCAAGAGCGGATCTCTTGGCATCTaGGCTCCATGCAGTTCAGCTGATGCAAGTCACGTGGCTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: APGLEEDIKSGSLGI*APCSSADASHVAEK Trigger: TTTCTCAGCCACGTGACTTGCATCAGCTGAACTGCATGGAGCCAAGATGCCAAGAGATCCGCTCTTGATATCTTCTTCCAGCCCTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS CAA 90 bp | CCAACAATGCCCCAGGGCTGGAAGAAGATATCAAGAGCGGATCTCTaGGCATCTTGGCTCCATGCAGTTCAGCTGATGCAAGTCACGTGG | + |
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Preference number: 6 (lower is better) Translates to: PTMPQGWKKISRADL*ASWLHAVQLMQVTW Trigger: CCACGTGACTTGCATCAGCTGAACTGCATGGAGCCAAGATGCCAAGAGATCCGCTCTTGATATCTTCTTCCAGCCCTGGGGCATTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS CAA 90 bp | GTGGTGCAGAAACGAACCCAGAAAGGACAGGATCAGAAGTGTCGTTaGCACCAGTTTAACGGGTCCTGCCCTCACTCTTCAGTGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VVQKRTQKGQDQKCR*HQFNGSCPHSSVPV Trigger: CACTGGCACTGAAGAGTGAGGGCAGGACCCGTTAAACTGGTGCAAACGACACTTCTGATCCTGTCCTTTCTGGGTTCGTTTCTGCACCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000491741.5 ENST00000498373.1 |
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| CDS TCA 72 bp | CAGGAATGCAGGCAGTTGTGGACGGTCAGCAACACCTaGAGTGGCTGTACCTGGGCTGTAGTTTTATTGTGC | + |
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Preference number: 6 (lower is better) Translates to: QECRQLWTVSNT*SGCTWAVVLLC Trigger: GCACAATAAAACTACAGCCCAGGTACAGCCACTTCAGGTGTTGCTGACCGTCCACAACTGCCTGCATTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000434222.5 ENST00000465351.5 ENST00000498771.5 |
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| CDS CAA 72 bp | CCCCAGGGCTGGAAGAAGATATCAAGAGCGGATCTCTaGGCATCTTGGCTCCATGCAGTTCAGCTGATGCAA | + |
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Preference number: 6 (lower is better) Translates to: PQGWKKISRADL*ASWLHAVQLMQ Trigger: TTGCATCAGCTGAACTGCATGGAGCCAAGATGCCAAGAGATCCGCTCTTGATATCTTCTTCCAGCCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS GCA 72 bp | AACGAACCCAGAAAGGACAGGATCAGAAGTGTCGTTTaGACCAGTTTAACGGGTCCTGCCCTCACTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: NEPRKDRIRSVV*TSLTGPALTLQ Trigger: CTGAAGAGTGAGGGCAGGACCCGTTAAACTGGTGCAAACGACACTTCTGATCCTGTCCTTTCTGGGTTCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000491741.5 ENST00000498373.1 |
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| CDS GCA 72 bp | GATATCAAGAGCGGATCTCTTGGCATCTTGGCTCCATaGAGTTCAGCTGATGCAAGTCACGTGGCTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: DIKSGSLGILAP*SSADASHVAEK Trigger: TTTCTCAGCCACGTGACTTGCATCAGCTGAACTGCATGGAGCCAAGATGCCAAGAGATCCGCTCTTGATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS GCA 72 bp | GCCAAAATATGTAGTTACTTCAGGCCAGGCCAACAATaGCCCAGGGCTGGAAGAAGATATCAAGAGCGGATC | + |
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Preference number: 6 (lower is better) Translates to: AKICSYFRPGQQ*PRAGRRYQERI Trigger: GATCCGCTCTTGATATCTTCTTCCAGCCCTGGGGCATTGTTGGCCTGGCCTGAAGTAACTACATATTTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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| CDS CAA 72 bp | AAACGAACCCAGAAAGGACAGGATCAGAAGTGTCGTTaGCACCAGTTTAACGGGTCCTGCCCTCACTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: KRTQKGQDQKCR*HQFNGSCPHSS Trigger: TGAAGAGTGAGGGCAGGACCCGTTAAACTGGTGCAAACGACACTTCTGATCCTGTCCTTTCTGGGTTCGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000491741.5 ENST00000498373.1 |
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| CDS GCA 72 bp | CTCTTCCATGGCCTACAGAGAAAAGTGTCTGTGTGGTaGAGAAACGAACCCAGAAAGGACAGGATCAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LFHGLQRKVSVW*RNEPRKDRIRS Trigger: ACTTCTGATCCTGTCCTTTCTGGGTTCGTTTCTGCACCACACAGACACTTTTCTCTGTAGGCCATGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000491741.5 ENST00000498373.1 |
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| CDS CCA 72 bp | TCTTGGCTCCATGCAGTTCAGCTGATGCAAGTCACGTaGCTGAGAAAGCAAGGTAATGTGCAAAGCAAGAAC | + |
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Preference number: 6 (lower is better) Translates to: SWLHAVQLMQVT*LRKQGNVQSKN Trigger: GTTCTTGCTTTGCACATTACCTTGCTTTCTCAGCCACGTGACTTGCATCAGCTGAACTGCATGGAGCCAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467251.1 |
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