RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKR1A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000117448

Ensembl transcript IDs: ENST00000351829.9, ENST00000372070.7, ENST00000434299.5, ENST00000471651.1, ENST00000473038.5, ENST00000475919.1, ENST00000475985.1, ENST00000476957.5, ENST00000481885.5, ENST00000487654.5, ENST00000495913.5, ENST00000496999.5, ENST00000497973.5, ENST00000621846.4

Found 261 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACAGGGCACGGCACTAATGGTGAGCTCTTCTCACATCTTCTGCTaGGACTTACTTATTACTGTAACCCCAGGTGCTCAACAGAAAAGT +
Preference number: 1 (lower is better)
Translates to: AQGTALMVSSSHIFC*DLLITVTPGAQQKS
Trigger: ACTTTTCTGTTGAGCACCTGGGGTTACAGTAATAAGTAAGTCTCAGCAGAAGATGTGAGAAGAGCTCACCATTAGTGCCGTGCCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471651.1
3UTR-3UTR TCA 90 bp CATGGAATGCCTATGCCCCCTCCTCTTCCTAGACGTAGATATCTCCTCTCCCCTGGGGTACACACCATGTaGGACTGCCTTCCTTTTTCC +
Preference number: 2 (lower is better)
Translates to: HGMPMPPPLPRRRYLLSPGVHTM*DCLPFS
Trigger: GGAAAAAGGAAGGCAGTCTCACATGGTGTGTACCCC...AGGGGAGAGGAGATATCTACGTCTAGGAAGAGGAGGGGGCATAGGCATTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000471651.1
3UTR-3UTR GCA 90 bp CTGCTGAGACTTACTTATTACTGTAACCCCAGGTGCTCAACAGAAAAGTCAGCACAGGAGGGTTACAGGTaGATACCCTGGGGTACACAC +
Preference number: 2 (lower is better)
Translates to: LLRLTYYCNPRCSTEKSAQEGYR*IPWGTH
Trigger: GTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTG...TGCTGACTTTTCTGTTGAGCACCTGGGGTTACAGTAATAAGTAAGTCTCAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471651.1
3UTR-3UTR CCA 90 bp GCTTTTTCATCCTTCCAGATCGTAACCCAGGTGTTAAGTTTACATGGAATGCCTTACAGGTGCATACCCTaGGGTACACACCATGTGAGA +
Preference number: 2 (lower is better)
Translates to: AFSSFQIVTQVLSLHGMPYRCIP*GTHHVR
Trigger: TCTCACATGGTGTGTACCCCAGGGTATGCACCTGTA...AGGCATTCCATGTAAACTTAACACCTGGGTTACGATCTGGAAGGATGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471651.1
3UTR-3UTR TCA 90 bp AGCCATGCTTTTTCATCCTTCCAGATCGTAACCCAGGTGTTAAGTTTACATGGAAGCTTGGCATGCAAATaGGTGTTCCTATCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SHAFSSFQIVTQVLSLHGSLACK*VFLSCS
Trigger: AGAGCAGGATAGGAACACTCATTTGCATGCCAAGCT...TCCATGTAAACTTAACACCTGGGTTACGATCTGGAAGGATGAAAAAGCATGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471651.1
3UTR TCA 72 bp CAGGTGCTCAACAGAAAAGTCAGCACCTTTTCTAAATaGATAAAGGGAGCAGGAGGGTTACAGGTGCATACC +
Preference number: 3 (lower is better)
Translates to: QVLNRKVSTFSK*IKGAGGLQVHT
Trigger: GGTATGCACCTGTAACCCTCCTGCTCCCTTTATTCATTTAGAAAAGGTGCTGACTTTTCTGTTGAGCACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGTGGCCACGTGGGCGGTaGAAGGGGCGGGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGWPRGR*KGRGQP
Trigger: AGGCTGGCCCCGCCCCTTGCACCGCCCACGTGGCCA...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGGATCACGCGCAGGGTaGACCGCCTTCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGGSRAG*TAFAAS
Trigger: GGAGGCGGCGAAGGCGGTCCACCCTGCGCGTGATCC...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCATGGCCACGTGGGCGGTaGAAGGGGCGGGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAWPRGR*KGRGQP
Trigger: AGGCTGGCCCCGCCCCTTGCACCGCCCACGTGGCCA...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGTGAGACTGCCTTCCTTAGGCACCGCCTTGCCTaGTCCCACGTCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GGLQVHTLGYTPCETAFLRHRLA*SHVLLQ
Trigger: CTGAAGGAGGACGTGGGACCAGGCAAGGCGGTGCCT...AAGGAAGGCAGTCTCACATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp CTCATCCTCAGGGAGTTATCCACCCTTCTTCCAGCACAGGGCACGGCACTAATGGCCTGGGCTCAGTTCTaGACCCCGCCAGAGATCCAA +
Preference number: 4 (lower is better)
Translates to: LILRELSTLLPAQGTALMAWAQF*TPPEIQ
Trigger: TTGGATCTCTGGCGGGGTGCAGAACTGAGCCCAGGC...CATTAGTGCCGTGCCCTGTGCTGGAAGAAGGGTGGATAACTCCCTGAGGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGCCCGAGGCACCGCCTTaGCTGGTCCCACGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELPEAPP*LVPRPP
Trigger: AGGAGGACGTGGGACCAGGCAAGGCGGTGCCTCGGG...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTCCCGAGGCACCGCCTTaGCTGGTCCCACGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRAPEAPP*LVPRPP
Trigger: AGGAGGACGTGGGACCAGGCAAGGCGGTGCCTCGGG...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGACAGGCCCAGCGCCTaGACCAGCCCCTTAGCCACC +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRADRPSA*TSPLAT
Trigger: GGTGGCTAAGGGGCTGGTGCAGGCGCTGGGCCTGTC...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGACAGGCCCAGCGCCTaGACCAGCCCCTTAGCCACC +
Preference number: 4 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELDRPSA*TSPLAT
Trigger: GGTGGCTAAGGGGCTGGTGCAGGCGCTGGGCCTGTC...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGGATCACGCGCAGGGTaGACCGCCTTCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAGSRAG*TAFAAS
Trigger: GGAGGCGGCGAAGGCGGTCCACCCTGCGCGTGATCC...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp CAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGTGAGACTGCCTTCCCCTCGGGGTGGTGCTTaGTGTTCCACAGCTTGGATG +
Preference number: 4 (lower is better)
Translates to: QEGYRCIPWGTHHVRLPSPRGGA*CSTAWM
Trigger: CATCCAAGCTGTGGAACACCAAGCACCACCCCGAGG...GGAAGGCAGTCTCACATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAACCCGAGGCACCGCCTTaGCTGGTCCCACGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELEPEAPP*LVPRPP
Trigger: AGGAGGACGTGGGACCAGGCAAGGCGGTGCCTCGGG...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGAACTGGCCGGAACTTaGTCACTCACTCCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGELAGT*SLTPQR
Trigger: GCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTC...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGGATCACGCGCAGGGTaGACCGCCTTCGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRGSRAG*TAFAAS
Trigger: GGAGGCGGCGAAGGCGGTCCACCCTGCGCGTGATCC...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGCACCTGCAAGACAGCTaGACGCACGGAGGCCACACT +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGHLQDS*THGGHT
Trigger: AGTGTGGCCTCCGTGCGTCCAGCTGTCTTGCAGGTG...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGACAGGCCCAGCGCCTaGACCAGCCCCTTAGCCACC +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLDRPSA*TSPLAT
Trigger: GGTGGCTAAGGGGCTGGTGCAGGCGCTGGGCCTGTC...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGGTGGCATTCCACCTaGAAGACAGCTGGACGCACG +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRGWHST*KTAGRT
Trigger: CGTGCGTCCAGCTGTCTTGCAGGTGGAATGCCACCC...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTTTGCTGGCCCACATTaGACCGCGCGCCTAGGCGCC +
Preference number: 4 (lower is better)
Translates to: CSNGFINSLFPLWQDLISFAGPH*TARLGA
Trigger: GGCGCCTAGGCGCGCGGTGCAATGTGGGCCAGCAAA...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR GCA 90 bp CTCATCCTCAGGGAGTTATCCACCCTTCTTCCAGCACAGGGCACGGCACTAATGCAGGAGGGTTACAGGTaGATACCCTGGGGTACACAC +
Preference number: 4 (lower is better)
Translates to: LILRELSTLLPAQGTALMQEGYR*IPWGTH
Trigger: GTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTG...CATTAGTGCCGTGCCCTGTGCTGGAAGAAGGGTGGATAACTCCCTGAGGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR TCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGCACAAGCACAGAGCGTaGATAGGGTACTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGHKHRA*IGYCGL
Trigger: CAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTG...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAAACTCCTGGGCACAATaGGGCAGGTGGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELENSWAQ*GRWRWP
Trigger: TGGCCAGCGCCACCTGCCTCATTGTGCCCAGGAGTT...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGAACTCCTGGGCACAATaGGGCAGGTGGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: MALLTPSFRCGRTSLAAENSWAQ*GRWRWP
Trigger: TGGCCAGCGCCACCTGCCTCATTGTGCCCAGGAGTT...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGCCCCTTAGCCACCAGTaGCTCCAGAGCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRPLSHQ*LQSLPS
Trigger: ACTTGGAAGGCTCTGGAGGCACTGGTGGCTAAGGGG...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGGTGGCATTCCACCTaGAAGACAGCTGGACGCACG +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRAGWHST*KTAGRT
Trigger: CGTGCGTCCAGCTGTCTTGCAGGTGGAATGCCACCC...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGCCAGCCTCGCCTTTTaGTGGCCCACATTGCACCGC +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELEASLAF*WPTLHR
Trigger: GCGGTGCAATGTGGGCCAGCAAAAGGCGAGGCTGGC...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR CCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGGCACCGCCTTGCCTaGTCCCACGTCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIRHRLA*SHVLLQ
Trigger: CTGAAGGAGGACGTGGGACCAGGCAAGGCGGTGCCT...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAAGGCACCGCCTTGCCTaGTCCCACGTCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAARHRLA*SHVLLQ
Trigger: CTGAAGGAGGACGTGGGACCAGGCAAGGCGGTGCCT...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCAGGCACCGCCTTGCCTaGTCCCACGTCCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: CSNGFINSLFPLWQDLISRHRLA*SHVLLQ
Trigger: CTGAAGGAGGACGTGGGACCAGGCAAGGCGGTGCCT...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGTCCCATCAGCATTCTTaGGGAAGGGGTTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGSHQHS*GRGCLP
Trigger: GGGGAGACAACCCCTTCCCCAAGAATGCTGATGGGA...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp ATGAATAAAGGGAGCAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGCCCCAGATGAGGCTCTaGCAAGGCTCACTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: MNKGSRRVTGAYPGVHTMPQMRL*QGSLKG
Trigger: GCCTTTGAGTGAGCCTTGCCAGAGCCTCATCTGGGG...CATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTGCTCCCTTTATTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR TCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGTCCCGAGGAAGGACCTaGAGGGGATGGAAAACAGAG +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRSRGRT*RGWKTE
Trigger: CTCTGTTTTCCATCCCCTTCAGGTCCTTCCTCGGGA...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR TCA 90 bp GCTGCTGTAGCAGAAGAGGCTAAGATCCCATGTCAAGCTCCTCAGCTTGGCATGACAGCTGCTTTTACCTaGCCAGGCTCACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: AAVAEEAKIPCQAPQLGMTAAFT*PGSLFQ
Trigger: CTGGAAGAGTGAGCCTGGTCAGGTAAAAGCAGCTGT...CATGCCAAGCTGAGGAGCTTGACATGGGATCTTAGCCTCTTCTGCTACAGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR TCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGCTGGACCTGCCACCTaGGCAAGATCTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAAGPAT*ARSELE
Trigger: CTCCAGCTCAGATCTTGCTCAGGTGGCAGGTCCAGC...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTGCTGGACCTGCCACCTaGGCAAGATCTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIAGPAT*ARSELE
Trigger: CTCCAGCTCAGATCTTGCTCAGGTGGCAGGTCCAGC...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp CTCAGGGAGTTATCCACCCTTCTTCCAGCACAGGGCACGGCACTAATGGTGAGCAGCTTGGCATGCAAATaGGTGTTCCTATCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LRELSTLLPAQGTALMVSSLACK*VFLSCS
Trigger: AGAGCAGGATAGGAACACTCATTTGCATGCCAAGCT...GCTCACCATTAGTGCCGTGCCCTGTGCTGGAAGAAGGGTGGATAACTCCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR TCA 90 bp ATGCCCCCTCCTCTTCCTAGACGTAGATATCTCCTCTCCCCTAGGAAGTCTTCCGGGGTACACACCATGTaGGACTGCCTTCCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: MPPPLPRRRYLLSPRKSSGVHTM*DCLPFS
Trigger: GGAAAAAGGAAGGCAGTCTCACATGGTGTGTACCCC...GGAAGACTTCCTAGGGGAGAGGAGATATCTACGTCTAGGAAGAGGAGGGGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAGCCTGGGCTCAGTTCTaGACCCCGCCAGAGATCCAA +
Preference number: 4 (lower is better)
Translates to: FINSLFPLWQDLISCRAGAWAQF*TPPEIQ
Trigger: TTGGATCTCTGGCGGGGTGCAGAACTGAGCCCAGGC...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGATCAGGATCACGCCATaGACGATCAGAGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGIRITP*TIRGAQ
Trigger: TTGGGCTCCTCTGATCGTGCATGGCGTGATCCTGAT...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGTACAGAGGATGCCCTaGATCCCTTGGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGVQRMP*IPWDSL
Trigger: AAGAGAGTCCCAAGGGATGCAGGGCATCCTCTGTAC...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGAAGGGGTACAGAGGATaGCCTGCATCCCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRKGYRG*PASLGT
Trigger: AGTCCCAAGGGATGCAGGGCATCCTCTGTACCCCTT...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGCAGGACCTCATTAGCTaGAGAGCTGGAAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELQDLIS*RAGREA
Trigger: GGCCTCCCTTCCAGCTCTGCAGCTAATGAGGTCCTG...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGTGAGACTGCCTTCCTTTACATGGAATGCCTATaGCCCCTCCTCTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: GGLQVHTLGYTPCETAFLYMECL*PLLFLD
Trigger: GTCTAGGAAGAGGAGGGGGCATAGGCATTCCATGTA...AAGGAAGGCAGTCTCACATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR CCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTTCCGCAGCGCGGGTTTaGAGAACTCCTGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRASAARV*RTPGHN
Trigger: ATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGA...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTGAACTGGCCGGAACTTaGTCACTCACTCCGCAGCGC +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIELAGT*SLTPQR
Trigger: GCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTC...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGTACCGTCTCCACCTCTaGATCCTCGAGGTCGAACTG +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRYRLHL*ILEVEL
Trigger: CAGTTCGACCTCGAGGATCCAGAGGTGGAGACGGTA...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGTGAATAGGGTACTGTaGCCTGGGCTCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGVNRVL*PGLSSA
Trigger: TGCAGAACTGAGCCCAGGCCACAGTACCCTATTCAC...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGCCTCGGGGTGGTGCTTaGTGTTCCACAGCTTGGATG +
Preference number: 4 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELPRGGA*CSTAWM
Trigger: CATCCAAGCTGTGGAACACCAAGCACCACCCCGAGG...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGTCCACATCCTCGGGGTaGTGCTTGGTGTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELSTSSG*CLVFHS
Trigger: GCTGTGGAACACCAAGCACCACCCCGAGGATGTGGA...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGACACCTGCAAGACAGCTaGACGCACGGAGGCCACACT +
Preference number: 4 (lower is better)
Translates to: FINSLFPLWQDLISCRAGHLQDS*THGGHT
Trigger: AGTGTGGCCTCCGTGCGTCCAGCTGTCTTGCAGGTG...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGTCCCTCTTTCCGTTGTaGCAGGACCTCATTAGCTGC +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGSLFPL*QDLISC
Trigger: GCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGA...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAAGCCTCGCCTTTTGCTaGCCCACATTGCACCGCGCG +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRSLAFC*PTLHRA
Trigger: CGCGCGGTGCAATGTGGGCCAGCAAAAGGCGAGGCT...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR CCA 90 bp CAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGTGAGACTGCCTTCCTCAAGCTCCTCAGCTTaGCATGCAAATGAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: QEGYRCIPWGTHHVRLPSSSSSA*HANECS
Trigger: GGAACACTCATTTGCATGCCAAGCTGAGGAGCTTGA...GGAAGGCAGTCTCACATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR TCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGACAGCTGCTTTTACCTaGCCAGGCTCACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRTAAFT*PGSLFQ
Trigger: CTGGAAGAGTGAGCCTGGTCAGGTAAAAGCAGCTGT...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCACAATCTGCCGACTGTTaGAGTTGGACAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAQSADC*SWTGPA
Trigger: CGCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTG...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTCAATCTGCCGACTGTTaGAGTTGGACAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIQSADC*SWTGPA
Trigger: CGCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTG...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCAATCTGCCGACTGTTaGAGTTGGACAGGCCCAGCG +
Preference number: 4 (lower is better)
Translates to: MALLTPSFRCGRTSLAAEQSADC*SWTGPA
Trigger: CGCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTG...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGACCTGCCACCTaGGCAAGATCTGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRAGPAT*ARSELE
Trigger: CTCCAGCTCAGATCTTGCTCAGGTGGCAGGTCCAGC...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCCTGGGCTCAGTTCTaGACCCCGCCAGAGATCCAA +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRAWAQF*TPPEIQ
Trigger: TTGGATCTCTGGCGGGGTGCAGAACTGAGCCCAGGC...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCCTGGGCTCAGTTCTaGACCCCGCCAGAGATCCAA +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLAWAQF*TPPEIQ
Trigger: TTGGATCTCTGGCGGGGTGCAGAACTGAGCCCAGGC...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp CCATGCTTTTTCATCCTTCCAGATCGTAACCCAGGTGTTAAGTTTACATGGAATCCCGAGGCACCGCCTTaGCTGGTCCCACGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PCFFILPDRNPGVKFTWNPEAPP*LVPRPP
Trigger: AGGAGGACGTGGGACCAGGCAAGGCGGTGCCTCGGG...ATTCCATGTAAACTTAACACCTGGGTTACGATCTGGAAGGATGAAAAAGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTACATCCTCGGGGTGGTaGTTGGTGTTCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRATSSGW*LVFHSL
Trigger: CAAGCTGTGGAACACCAAGCACCACCCCGAGGATGT...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTCCCCTTAGCCACCAGTaGCTCCAGAGCCTTCCAAGT +
Preference number: 4 (lower is better)
Translates to: APMALLTPSFRCGRTSLAPLSHQ*LQSLPS
Trigger: ACTTGGAAGGCTCTGGAGGCACTGGTGGCTAAGGGG...AGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGGGTGGCATTCCACCTaGAAGACAGCTGGACGCACG +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRGWHST*KTAGRT
Trigger: CGTGCGTCCAGCTGTCTTGCAGGTGGAATGCCACCC...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCCAGGACCTCATTAGCTaGAGAGCTGGAAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: CSNGFINSLFPLWQDLISQDLIS*RAGREA
Trigger: GGCCTCCCTTCCAGCTCTGCAGCTAATGAGGTCCTG...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCACAGGACCTCATTAGCTaGAGAGCTGGAAGGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAQDLIS*RAGREA
Trigger: GGCCTCCCTTCCAGCTCTGCAGCTAATGAGGTCCTG...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTACGCCATTGCCCCCTTTaGCTGGCTAGCTGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLRHCPL*LASCCS
Trigger: TGAGCAGCAGCTAGCCAGGCAAAGGGGGCAATGGCG...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR GCA 90 bp CAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGTGAGACTGCCTTCCTACTGTAACCCCAGGTaGTCAACAGAAAAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QEGYRCIPWGTHHVRLPSYCNPR*STEKSA
Trigger: TGCTGACTTTTCTGTTGAGCACCTGGGGTTACAGTA...GGAAGGCAGTCTCACATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR CCA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTCCGCAGCGCGGGTTTaGAGAACTCCTGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: CSNGFINSLFPLWQDLISSAARV*RTPGHN
Trigger: ATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGA...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGATCCGCAGCGCGGGTTTaGAGAACTCCTGGGCACAAT +
Preference number: 4 (lower is better)
Translates to: FINSLFPLWQDLISCRAGSAARV*RTPGHN
Trigger: ATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGA...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCACCTCGGGGTGGTGCTTaGTGTTCCACAGCTTGGATG +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAPRGGA*CSTAWM
Trigger: CATCCAAGCTGTGGAACACCAAGCACCACCCCGAGG...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCCTCGGGGTGGTGCTTaGTGTTCCACAGCTTGGATG +
Preference number: 4 (lower is better)
Translates to: MALLTPSFRCGRTSLAAEPRGGA*CSTAWM
Trigger: CATCCAAGCTGTGGAACACCAAGCACCACCCCGAGG...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTTCCACATCCTCGGGGTaGTGCTTGGTGTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: APMALLTPSFRCGRTSLASTSSG*CLVFHS
Trigger: GCTGTGGAACACCAAGCACCACCCCGAGGATGTGGA...AGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGATCCACATCCTCGGGGTaGTGCTTGGTGTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: FINSLFPLWQDLISCRAGSTSSG*CLVFHS
Trigger: GCTGTGGAACACCAAGCACCACCCCGAGGATGTGGA...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGTCCAGATACTCCAGCTaGAGGTCAGCCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRSRYSS*RSARVF
Trigger: GAAGACTCTGGCTGACCTCCAGCTGGAGTATCTGGA...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTTCCCATCAGCATTCTTaGGGAAGGGGTTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRASHQHS*GRGCLP
Trigger: GGGGAGACAACCCCTTCCCCAAGAATGCTGATGGGA...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGACACCTGCAAGACAGCTaGACGCACGGAGGCCACACT +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRHLQDS*THGGHT
Trigger: AGTGTGGCCTCCGTGCGTCCAGCTGTCTTGCAGGTG...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTCAATGCCAGGACTACTaGTTCCTCCAGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRAQCQDY*FLQQDR
Trigger: CCTGTCCTGCTGGAGGAACCAGTAGTCCTGGCATTG...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGCAATGCCAGGACTACTaGTTCCTCCAGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELQCQDY*FLQQDR
Trigger: CCTGTCCTGCTGGAGGAACCAGTAGTCCTGGCATTG...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTATTGCCCCCTTTGCCTaGCTAGCTGCTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRAIAPFA*LAAAHP
Trigger: AGGATGAGCAGCAGCTAGCCAGGCAAAGGGGGCAAT...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR TCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCATCCCGAGGAAGGACCTaGAGGGGATGGAAAACAGAG +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAASRGRT*RGWKTE
Trigger: CTCTGTTTTCCATCCCCTTCAGGTCCTTCCTCGGGA...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR TCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTCACAAGCACAGAGCGTaGATAGGGTACTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIHKHRA*IGYCGL
Trigger: CAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTG...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTACAGCTGCTTTTACCTaGCCAGGCTCACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRATAAFT*PGSLFQ
Trigger: CTGGAAGAGTGAGCCTGGTCAGGTAAAAGCAGCTGT...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTGCACGGAGGCCACACTaGGTATGTCATCAATCTGCC +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIARRPH*VCHQSA
Trigger: GGCAGATTGATGACATACTCAGTGTGGCCTCCGTGC...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp TCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCGCACGGAGGCCACACTaGGTATGTCATCAATCTGCC +
Preference number: 4 (lower is better)
Translates to: SNGFINSLFPLWQDLISCARRPH*VCHQSA
Trigger: GGCAGATTGATGACATACTCAGTGTGGCCTCCGTGC...GCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAACACCTGAGCAAGATCTaGGCTGGAGATCGGCCATAC +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELEHLSKI*AGDRPY
Trigger: GTATGGCCGATCTCCAGCTCAGATCTTGCTCAGGTG...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCACACCTGAGCAAGATCTaGGCTGGAGATCGGCCATAC +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAHLSKI*AGDRPY
Trigger: GTATGGCCGATCTCCAGCTCAGATCTTGCTCAGGTG...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGATCTTCTGCCCAGTGTaGAGTAGAACACAGGAAGCC +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRIFCPV*SRTQEA
Trigger: GGCTTCCTGTGTTCTACTGCACACTGGGCAGAAGAT...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp CATGGAATGCCTATGCCCCCTCCTCTTCCTAGACGTAGATATCTCCTCTCCCCTGGCATACTTAACAGCTaGTTTTACCTGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: HGMPMPPPLPRRRYLLSPGILNS*FYLTRL
Trigger: GAGCCTGGTCAGGTAAAAGCAGCTGTTAAGTATGCC...AGGGGAGAGGAGATATCTACGTCTAGGAAGAGGAGGGGGCATAGGCATTCCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGACATCCTCGGGGTGGTaGTTGGTGTTCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: MALLTPSFRCGRTSLAAETSSGW*LVFHSL
Trigger: CAAGCTGTGGAACACCAAGCACCACCCCGAGGATGT...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAAGGGGTACAGAGGATaGCCTGCATCCCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: FINSLFPLWQDLISCRAGKGYRG*PASLGT
Trigger: AGTCCCAAGGGATGCAGGGCATCCTCTGTACCCCTT...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp ATAAAGGGAGCAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGTGAGTGGTGTTCCACAGCTTaGATGTCACAAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IKGAGGLQVHTLGYTPCEWCSTA*MSQTAP
Trigger: AGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCA...CTCACATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTGCTCCCTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGTGGTGTTCCACAGCTTaGATGTCACAAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGWCSTA*MSQTAP
Trigger: AGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCA...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAATCCCATCAGCATTCTTaGGGAAGGGGTTGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELESHQHS*GRGCLP
Trigger: GGGGAGACAACCCCTTCCCCAAGAATGCTGATGGGA...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCAATGCCAGGACTACTaGTTCCTCCAGCAGGACAGG +
Preference number: 4 (lower is better)
Translates to: MALLTPSFRCGRTSLAAEQCQDY*FLQQDR
Trigger: CCTGTCCTGCTGGAGGAACCAGTAGTCCTGGCATTG...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGAGCAAGATCTGAGCTaGAGATCGGCCATACTTTTC +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGEQDLS*RSAILF
Trigger: GAAAAGTATGGCCGATCTCCAGCTCAGATCTTGCTC...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
3UTR CAA 72 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTaGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFP*WQDLISCRAGR
Trigger: CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAACAGCTGCTTTTACCTaGCCAGGCTCACTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAATAAFT*PGSLFQ
Trigger: CTGGAAGAGTGAGCCTGGTCAGGTAAAAGCAGCTGT...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCACGGAGGCCACACTaGGTATGTCATCAATCTGCC +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLARRPH*VCHQSA
Trigger: GGCAGATTGATGACATACTCAGTGTGGCCTCCGTGC...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTACACCTGAGCAAGATCTaGGCTGGAGATCGGCCATAC +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLHLSKI*AGDRPY
Trigger: GTATGGCCGATCTCCAGCTCAGATCTTGCTCAGGTG...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGCATACTTAACAGCTaGTTTTACCTGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: INSLFPLWQDLISCRAGRGILNS*FYLTRL
Trigger: GAGCCTGGTCAGGTAAAAGCAGCTGTTAAGTATGCC...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAACATCCTCGGGGTGGTaGTTGGTGTTCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLTSSGW*LVFHSL
Trigger: CAAGCTGTGGAACACCAAGCACCACCCCGAGGATGT...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTATCAGGATCACGCCATaGACGATCAGAGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIIRITP*TIRGAQ
Trigger: TTGGGCTCCTCTGATCGTGCATGGCGTGATCCTGAT...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCATCAGGATCACGCCATaGACGATCAGAGGAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SNGFINSLFPLWQDLISCIRITP*TIRGAQ
Trigger: TTGGGCTCCTCTGATCGTGCATGGCGTGATCCTGAT...GCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGTTCAGGGCATTTAGCTaGTTCATCTCTTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGFRAFS*FISSGL
Trigger: TAGCCCAGAAGAGATGAAGCAGCTAAATGCCCTGAA...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAAAGGGGTACAGAGGATaGCCTGCATCCCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRKGYRG*PASLGT
Trigger: AGTCCCAAGGGATGCAGGGCATCCTCTGTACCCCTT...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCCCTCCGGATTCACAATaGCATCCGTGGCTCCATACT +
Preference number: 4 (lower is better)
Translates to: SNGFINSLFPLWQDLISCPPDSQ*HPWLHT
Trigger: AGTATGGAGCCACGGATGGCATTGTGAATCCGGAGG...GCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR CCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGATCCTCGAGGTCGAACTaGCCGGAACTTGGTCACTCA +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRSSRSN*PELGHS
Trigger: TGAGTGACCAAGTTCCGGCCAGTTCGACCTCGAGGA...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGATACCGTCTCCACCTCTaGATCCTCGAGGTCGAACTG +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRYRLHL*ILEVEL
Trigger: CAGTTCGACCTCGAGGATCCAGAGGTGGAGACGGTA...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGTGAATAGGGTACTGTaGCCTGGGCTCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELEVNRVL*PGLSSA
Trigger: TGCAGAACTGAGCCCAGGCCACAGTACCCTATTCAC...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GTTTACATGGAATGCCTATGCCCCCTCCTCTTCCTAGACGTAGATATCTCCTCTGTGAATAGGGTACTGTaGCCTGGGCTCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VYMECLCPLLFLDVDISSVNRVL*PGLSSA
Trigger: TGCAGAACTGAGCCCAGGCCACAGTACCCTATTCAC...AGAGGAGATATCTACGTCTAGGAAGAGGAGGGGGCATAGGCATTCCATGTAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR CCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGTGAATAGGGTACTGTaGCCTGGGCTCAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAVNRVL*PGLSSA
Trigger: TGCAGAACTGAGCCCAGGCCACAGTACCCTATTCAC...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTTCCAGATACTCCAGCTaGAGGTCAGCCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLISRYSS*RSARVF
Trigger: GAAGACTCTGGCTGACCTCCAGCTGGAGTATCTGGA...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTCCAGATACTCCAGCTaGAGGTCAGCCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: CSNGFINSLFPLWQDLISSRYSS*RSARVF
Trigger: GAAGACTCTGGCTGACCTCCAGCTGGAGTATCTGGA...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGATTTTGAGCCAAGTATaGGTGGCATTCCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGILSQV*VAFHLQ
Trigger: TTGCAGGTGGAATGCCACCCATACTTGGCTCAAAAT...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTTCCCTCTTTCCGTTGTaGCAGGACCTCATTAGCTGC +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLISLFPL*QDLISC
Trigger: GCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGA...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp ATGAATAAAGGGAGCAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGAGCACCTTTTCTAAATaGATAAAGGGAGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: MNKGSRRVTGAYPGVHTMSTFSK*IKGAGG
Trigger: CCCTCCTGCTCCCTTTATTCATTTAGAAAAGGTGCT...CATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTGCTCCCTTTATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGTACAGAGGATGCCCTaGATCCCTTGGGACTCTCTT +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLVQRMP*IPWDSL
Trigger: AAGAGAGTCCCAAGGGATGCAGGGCATCCTCTGTAC...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGGATGGAAAACAGAGCTaGGAGGTAGTACCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: MALLTPSFRCGRTSLAAEDGKQS*EVVPSP
Trigger: TGGAGACGGTACTACCTCCCAGCTCTGTTTTCCATC...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CCA 90 bp AGCCATGCTTTTTCATCCTTCCAGATCGTAACCCAGGTGTTAAGTTTACATGGATCCACATCCTCGGGGTaGTGCTTGGTGTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: SHAFSSFQIVTQVLSLHGSTSSG*CLVFHS
Trigger: GCTGTGGAACACCAAGCACCACCCCGAGGATGTGGA...TCCATGTAAACTTAACACCTGGGTTACGATCTGGAAGGATGAAAAAGCATGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR CCA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAGAGGCCAAGAAGCTGTaGTCTCAGTACGGGTCATTA +
Preference number: 4 (lower is better)
Translates to: FINSLFPLWQDLISCRAGEAKKL*SQYGSL
Trigger: TAATGACCCGTACTGAGACCACAGCTTCTTGGCCTC...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGAGGCCAAGAAGCTGTaGTCTCAGTACGGGTCATTA +
Preference number: 4 (lower is better)
Translates to: APMALLTPSFRCGRTSLAEAKKL*SQYGSL
Trigger: TAATGACCCGTACTGAGACCACAGCTTCTTGGCCTC...AGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGAGGCCAAGAAGCTGTaGTCTCAGTACGGGTCATTA +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELEEAKKL*SQYGSL
Trigger: TAATGACCCGTACTGAGACCACAGCTTCTTGGCCTC...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp AGCCATGCTTTTTCATCCTTCCAGATCGTAACCCAGGTGTTAAGTTTACATGGACACAAGCACAGAGCGTaGATAGGGTACTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SHAFSSFQIVTQVLSLHGHKHRA*IGYCGL
Trigger: CAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTG...TCCATGTAAACTTAACACCTGGGTTACGATCTGGAAGGATGAAAAAGCATGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR TCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTAACACCTTGATGTTCTaGAGGATTCGAGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GFINSLFPLWQDLISCRANTLMF*RIREGV
Trigger: CACTCCTTCTCGAATCCTTCAGAACATCAAGGTGTT...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGAACACCTTGATGTTCTaGAGGATTCGAGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELNTLMF*RIREGV
Trigger: CACTCCTTCTCGAATCCTTCAGAACATCAAGGTGTT...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTATCAGAGGCATCTTCTaGCCAGTGTGCAGTAGAACA +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIIRGIF*PVCSRT
Trigger: TGTTCTACTGCACACTGGGCAGAAGATGCCTCTGAT...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCATCAGAGGCATCTTCTaGCCAGTGTGCAGTAGAACA +
Preference number: 4 (lower is better)
Translates to: CSNGFINSLFPLWQDLISIRGIF*PVCSRT
Trigger: TGTTCTACTGCACACTGGGCAGAAGATGCCTCTGAT...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTGGCATACTTAACAGCTaGTTTTACCTGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIGILNS*FYLTRL
Trigger: GAGCCTGGTCAGGTAAAAGCAGCTGTTAAGTATGCC...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GCTTTTTCATCCTTCCAGATCGTAACCCAGGTGTTAAGTTTACATGGAATGCCTACATCCTCGGGGTGGTaGTTGGTGTTCCACAGCTTG +
Preference number: 4 (lower is better)
Translates to: AFSSFQIVTQVLSLHGMPTSSGW*LVFHSL
Trigger: CAAGCTGTGGAACACCAAGCACCACCCCGAGGATGT...AGGCATTCCATGTAAACTTAACACCTGGGTTACGATCTGGAAGGATGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGATACTTTTCAGCCAATaGCAGGACTACTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELILFSQ*QDYWFL
Trigger: GAGGAACCAGTAGTCCTGGCATTGGCTGAAAAGTAT...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGATGGAAAACAGAGCTaGGAGGTAGTACCGTCTCCA +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRDGKQS*EVVPSP
Trigger: TGGAGACGGTACTACCTCCCAGCTCTGTTTTCCATC...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCATGGTGTTCCACAGCTTaGATGTCACAAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAWCSTA*MSQTAP
Trigger: AGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCA...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGATGGTGTTCCACAGCTTaGATGTCACAAACAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FINSLFPLWQDLISCRAGWCSTA*MSQTAP
Trigger: AGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCA...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp CTGCTGAGACTTACTTATTACTGTAACCCCAGGTGCTCAACAGAAAAGTCAGCATCCAGATACTCCAGCTaGAGGTCAGCCAGAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LLRLTYYCNPRCSTEKSASRYSS*RSARVF
Trigger: GAAGACTCTGGCTGACCTCCAGCTGGAGTATCTGGA...TGCTGACTTTTCTGTTGAGCACCTGGGGTTACAGTAATAAGTAAGTCTCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR CCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAAGCACTTCACATTTCTaGCTCCTTTCCAGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELESTSHF*LLSRCS
Trigger: ACTGCACCTGGAAAGGAGCCAGAAATGTGAAGTGCT...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR TCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGCAATTAGCTCATTTTaGGCCAAGTATGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAAISSF*AKYGWH
Trigger: ATGCCACCCATACTTGGCTCAAAATGAGCTAATTGC...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAATTAGCTCATTTTaGGCCAAGTATGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: APMALLTPSFRCGRTSLAAISSF*AKYGWH
Trigger: ATGCCACCCATACTTGGCTCAAAATGAGCTAATTGC...AGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAACACCTTGATGTTCTaGAGGATTCGAGAAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLINTLMF*RIREGV
Trigger: CACTCCTTCTCGAATCCTTCAGAACATCAAGGTGTT...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTATACTTTTCAGCCAATaGCAGGACTACTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GCSNGFINSLFPLWQDLIILFSQ*QDYWFL
Trigger: GAGGAACCAGTAGTCCTGGCATTGGCTGAAAAGTAT...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCATACTTTTCAGCCAATaGCAGGACTACTGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: CSNGFINSLFPLWQDLISILFSQ*QDYWFL
Trigger: GAGGAACCAGTAGTCCTGGCATTGGCTGAAAAGTAT...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp TCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCTTCAGGGCATTTAGCTaGTTCATCTCTTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SNGFINSLFPLWQDLISCFRAFS*FISSGL
Trigger: TAGCCCAGAAGAGATGAAGCAGCTAAATGCCCTGAA...GCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR GCA 90 bp GCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTTTCAGGGCATTTAGCTaGTTCATCTCTTCTGGGCTA +
Preference number: 4 (lower is better)
Translates to: APMALLTPSFRCGRTSLAFRAFS*FISSGL
Trigger: TAGCCCAGAAGAGATGAAGCAGCTAAATGCCCTGAA...AGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGATTTTGAGCCAAGTATaGGTGGCATTCCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: MALLTPSFRCGRTSLAAEILSQV*VAFHLQ
Trigger: TTGCAGGTGGAATGCCACCCATACTTGGCTCAAAAT...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAATTTTGAGCCAAGTATaGGTGGCATTCCACCTGCAA +
Preference number: 4 (lower is better)
Translates to: LLTPSFRCGRTSLAAELEILSQV*VAFHLQ
Trigger: TTGCAGGTGGAATGCCACCCATACTTGGCTCAAAAT...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGAGCAAGATCTGAGCTaGAGATCGGCCATACTTTTC +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCREQDLS*RSAILF
Trigger: GAAAAGTATGGCCGATCTCCAGCTCAGATCTTGCTC...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTATCACAATGCCATCCGTaGCTCCATACTCTCCCTAAA +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLSQCHP*LHTLPK
Trigger: TTTAGGGAGAGTATGGAGCCACGGATGGCATTGTGA...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR TCA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCAATTAGCTCATTTTaGGCCAAGTATGGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLAISSF*AKYGWH
Trigger: ATGCCACCCATACTTGGCTCAAAATGAGCTAATTGC...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR TCA 90 bp ATGAATAAAGGGAGCAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGTCTCACATCTTCTGCTaGGACTTACTTATTACTGTA +
Preference number: 4 (lower is better)
Translates to: MNKGSRRVTGAYPGVHTMSHIFC*DLLITV
Trigger: TACAGTAATAAGTAAGTCTCAGCAGAAGATGTGAGA...CATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTGCTCCCTTTATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp CTGCTGAGACTTACTTATTACTGTAACCCCAGGTGCTCAACAGAAAAGTCAGCAATCAGAGGCATCTTCTaGCCAGTGTGCAGTAGAACA +
Preference number: 4 (lower is better)
Translates to: LLRLTYYCNPRCSTEKSAIRGIF*PVCSRT
Trigger: TGTTCTACTGCACACTGGGCAGAAGATGCCTCTGAT...TGCTGACTTTTCTGTTGAGCACCTGGGGTTACAGTAATAAGTAAGTCTCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAAGTATGTCATCAATCTaGCGACTGTTGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PMALLTPSFRCGRTSLAASMSSI*RLLKLD
Trigger: GTCCAACTTCAACAGTCGGCAGATTGATGACATACT...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp CTGCTGAGACTTACTTATTACTGTAACCCCAGGTGCTCAACAGAAAAGTCAGCAGGTGTTAAGTTTACATaGAATGCCTATGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: LLRLTYYCNPRCSTEKSAGVKFT*NAYAPS
Trigger: GGAGGGGGCATAGGCATTCCATGTAAACTTAACACC...TGCTGACTTTTCTGTTGAGCACCTGGGGTTACAGTAATAAGTAAGTCTCAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR GCA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAAGTATGTCATCAATCTaGCGACTGTTGAAGTTGGAC +
Preference number: 4 (lower is better)
Translates to: NGFINSLFPLWQDLISCRSMSSI*RLLKLD
Trigger: GTCCAACTTCAACAGTCGGCAGATTGATGACATACT...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CCA 90 bp CCATGCTTTTTCATCCTTCCAGATCGTAACCCAGGTGTTAAGTTTACATGGAATTACAGGTGCATACCCTaGGGTACACACCATGTGAGA +
Preference number: 4 (lower is better)
Translates to: PCFFILPDRNPGVKFTWNYRCIP*GTHHVR
Trigger: TCTCACATGGTGTGTACCCCAGGGTATGCACCTGTA...ATTCCATGTAAACTTAACACCTGGGTTACGATCTGGAAGGATGAAAAAGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS CCA 90 bp CCGGAGGGAGGGGCAGGGGCCGGGCATAAAGGATCACGCGCAGGGTaGACCGCCTTCGCCGCCTCCCGAGGAAGGACTCCGCAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: PEGGAGAGHKGSRAG*TAFAASRGRTPQRG
Trigger: CCCGCGCTGCGGAGTCCTTCCTCGGGAGGCGGCGAAGGCGGTCCACCCTGCGCGTGATCCTTTATGCCCGGCCCCTGCCCCTCCCTCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434299.5
ENST00000621846.4
CDS TCA 90 bp GGTCACTCACTCCGCAGCGCGGGTTTGGAGAACTCCTGGGCACAATaGGGCAGGTGGCGCTGGCCACGTGGGCGGTGCAAGGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: GHSLRSAGLENSWAQ*GRWRWPRGRCKGRG
Trigger: GCCCCGCCCCTTGCACCGCCCACGTGGCCAGCGCCACCTGCCTCATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGAGTGAGTGACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS TCA 90 bp GAGGAAGGACTCCGCAGCGCGGGTTTGGAGAACTCCTGGGCACAATaGGGCAGGTGGCGCTGGCCACGTGGGCGGTGCAAGGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: EEGLRSAGLENSWAQ*GRWRWPRGRCKGRG
Trigger: GCCCCGCCCCTTGCACCGCCCACGTGGCCAGCGCCACCTGCCTCATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGAGTCCTTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621846.4
CDS TCA 90 bp TCACGCGCAGGGTGGACCGCCTTCGCCGCCTCCCGAGGAAGGACCTaGAGGGGATGGAAAACAGAGCTGGGAGGTAGTACCGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SRAGWTAFAASRGRT*RGWKTELGGSTVST
Trigger: GGTGGAGACGGTACTACCTCCCAGCTCTGTTTTCCATCCCCTTCAGGTCCTTCCTCGGGAGGCGGCGAAGGCGGTCCACCCTGCGCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000476957.5
ENST00000496999.5
CDS CCA 90 bp GGTCGAACTGGCCGGAACTTGGTCACTCACTCCGCAGCGCGGGTTTaGAGAACTCCTGGGCACAATGAGGCAGGTGGCGCTGGCCACGTG +
Preference number: 5 (lower is better)
Translates to: GRTGRNLVTHSAARV*RTPGHNEAGGAGHV
Trigger: CACGTGGCCAGCGCCACCTGCCTCATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS CCA 90 bp GGGCAGGCTCCACATCCTCGGGGTGGTGCTTGGTGTTCCACAGCTTaGATGTCACAAACAGCTCCTCCCGAGGCACCGCCTTGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GQAPHPRGGAWCSTA*MSQTAPPEAPPCLV
Trigger: GACCAGGCAAGGCGGTGCCTCGGGAGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000621846.4
CDS CCA 90 bp TACCGTCTCCACCTCTGGATCCTCGAGGTCGAACTGGCCGGAACTTaGTCACTCACTCCGCAGCGCGGGTTTGGAGAACTCCTGGGCACA +
Preference number: 5 (lower is better)
Translates to: YRLHLWILEVELAGT*SLTPQRGFGELLGT
Trigger: TGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCGACCTCGAGGATCCAGAGGTGGAGACGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS CCA 90 bp CTGGGAGGTAGTACCGTCTCCACCTCTGGATCCTCGAGGTCGAACTaGCCGGAACTTGGTCACTCACTCCGCAGCGCGGGTTTGGAGAAC +
Preference number: 5 (lower is better)
Translates to: LGGSTVSTSGSSRSN*PELGHSLRSAGLEN
Trigger: GTTCTCCAAACCCGCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCGACCTCGAGGATCCAGAGGTGGAGACGGTACTACCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000476957.5
ENST00000496999.5
CDS CCA 90 bp CCAGAGTCTTCCGGAGGGCAGGCTCCACATCCTCGGGGTGGTGCTTaGTGTTCCACAGCTTGGATGTCACAAACAGCTCCTCCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: PESSGGQAPHPRGGA*CSTAWMSQTAPPEA
Trigger: TGCCTCGGGAGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCTCCGGAAGACTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS-3UTR CAA 90 bp CATGGAATGCCTATGCCCCCTCCTCTTCCTAGACGTAGATATCTCCTCTCCCCTTCCCGAGGCACCGCCTaGCCTGGTCCCACGTCCTCC +
Preference number: 5 (lower is better)
Translates to: HGMPMPPPLPRRRYLLSPSRGTA*PGPTSS
Trigger: GGAGGACGTGGGACCAGGCAAGGCGGTGCCTCGGGA...AGGGGAGAGGAGATATCTACGTCTAGGAAGAGGAGGGGGCATAGGCATTCCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS GCA 90 bp TCAGCCAGAGTCTTCCGGAGGGCAGGCTCCACATCCTCGGGGTGGTaGTTGGTGTTCCACAGCTTGGATGTCACAAACAGCTCCTCCCGA +
Preference number: 5 (lower is better)
Translates to: SARVFRRAGSTSSGW*LVFHSLDVTNSSSR
Trigger: TCGGGAGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCTCCGGAAGACTCTGGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS GCA 90 bp AAGACAGCTGGACGCACGGAGGCCACACTGAGTATGTCATCAATCTaGCGACTGTTGAAGTTGGACAGGCCCAGCGCCTGCACCAGCCCC +
Preference number: 5 (lower is better)
Translates to: KTAGRTEATLSMSSI*RLLKLDRPSACTSP
Trigger: GGGGCTGGTGCAGGCGCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTGATGACATACTCAGTGTGGCCTCCGTGCGTCCAGCTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000473038.5
ENST00000476957.5
ENST00000497973.5
ENST00000621846.4
CDS CCA 90 bp AGGTCAGCCAGAGTCTTCCGGAGGGCAGGCTCCACATCCTCGGGGTaGTGCTTGGTGTTCCACAGCTTGGATGTCACAAACAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSARVFRRAGSTSSG*CLVFHSLDVTNSSS
Trigger: GGAGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCTCCGGAAGACTCTGGCTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS TCA 90 bp CTGAGGCGGGAGGATCACTTGAAACCTTGGCACAAGCACAGAGCGTaGATAGGGTACTGTGGCCTGGGCTCAGTTCTGCACCCCGCCAGA +
Preference number: 5 (lower is better)
Translates to: LRREDHLKPWHKHRA*IGYCGLGSVLHPAR
Trigger: TCTGGCGGGGTGCAGAACTGAGCCCAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTGCCAAGGTTTCAAGTGATCCTCCCGCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000434299.5
CDS-3UTR CAA 90 bp ATGCCCCCTCCTCTTCCTAGACGTAGATATCTCCTCTCCCCTAGGAAGTCTTCCGCCGCCATTGCCCCCTaGGCACAAGCACAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: MPPPLPRRRYLLSPRKSSAAIAP*AQAQSV
Trigger: CACGCTCTGTGCTTGTGCCAAGGGGGCAATGGCGGC...GGAAGACTTCCTAGGGGAGAGGAGATATCTACGTCTAGGAAGAGGAGGGGGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS GCA 90 bp CCAGGCTCACTCTTCCAGGTACCCAGACCAATCAGAGGCATCTTCTaGCCAGTGTGCAGTAGAACACAGGAAGCCGCCATTGCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: PGSLFQVPRPIRGIF*PVCSRTQEAAIAPL
Trigger: CAAGGGGGCAATGGCGGCTTCCTGTGTTCTACTGCACACTGGGCAGAAGATGCCTCTGATTGGTCTGGGTACCTGGAAGAGTGAGCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000471651.1
ENST00000481885.5
ENST00000621846.4
CDS-3UTR CAA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAATCCCGAGGCACCGCCTaGCCTGGTCCCACGTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLTPSFRCGRTSLAAELESRGTA*PGPTSS
Trigger: GGAGGACGTGGGACCAGGCAAGGCGGTGCCTCGGGA...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCATCCCGAGGCACCGCCTaGCCTGGTCCCACGTCCTCC +
Preference number: 5 (lower is better)
Translates to: PMALLTPSFRCGRTSLAASRGTA*PGPTSS
Trigger: GGAGGACGTGGGACCAGGCAAGGCGGTGCCTCGGGA...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS TCA 90 bp CTTGCCTCCCAACCCAGGGCCCTCTCCCTAAGACTGCCCCATACCTaGGCAAGATCTGAGCTGGAGATCGGCCATACTTTTCAGCCAATG +
Preference number: 5 (lower is better)
Translates to: LASQPRALSLRLPHT*ARSELEIGHTFQPM
Trigger: CATTGGCTGAAAAGTATGGCCGATCTCCAGCTCAGATCTTGCTCAGGTATGGGGCAGTCTTAGGGAGAGGGCCCTGGGTTGGGAGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475919.1
CDS GCA 90 bp CTCTTCCAGGTACCCAGACCAATCAGAGGCATCTTCTGCCCAGTGTaGAGTAGAACACAGGAAGCCGCCATTGCCCCCTTGGCACAAGCA +
Preference number: 5 (lower is better)
Translates to: LFQVPRPIRGIFCPV*SRTQEAAIAPLAQA
Trigger: TGCTTGTGCCAAGGGGGCAATGGCGGCTTCCTGTGTTCTACTGCACACTGGGCAGAAGATGCCTCTGATTGGTCTGGGTACCTGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000471651.1
ENST00000481885.5
ENST00000621846.4
CDS GCA 90 bp TGCCACGTTGCAGGTTCTTCTGGTGTCGGCCCTCCGGATTCACAATaGCATCCGTGGCTCCATACTCTCCCTAAAGTCAGGTTGGCTGGA +
Preference number: 5 (lower is better)
Translates to: CHVAGSSGVGPPDSQ*HPWLHTLPKVRLAG
Trigger: TCCAGCCAACCTGACTTTAGGGAGAGTATGGAGCCACGGATGGCATTGTGAATCCGGAGGGCCGACACCAGAAGAACCTGCAACGTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS GCA 90 bp CTCTTCCAGGTACCCAGACCAATCAGAGGCATCTTCTGCCCAGTGTaGAGTAGAACACAGGAAGCCGCCATTGCCCCCTTTGCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: LFQVPRPIRGIFCPV*SRTQEAAIAPFAWL
Trigger: TAGCCAGGCAAAGGGGGCAATGGCGGCTTCCTGTGTTCTACTGCACACTGGGCAGAAGATGCCTCTGATTGGTCTGGGTACCTGGAAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000434299.5
CDS GCA 90 bp CCAGGCTCACTCTTCCAGGTACCCAGACCAATCAGAGGCATCTTCTaGCCAGTGTGCAGTAGAACACAGGAAGCCGCCATTGCCCCCTTT +
Preference number: 5 (lower is better)
Translates to: PGSLFQVPRPIRGIF*PVCSRTQEAAIAPF
Trigger: AAAGGGGGCAATGGCGGCTTCCTGTGTTCTACTGCACACTGGGCAGAAGATGCCTCTGATTGGTCTGGGTACCTGGAAGAGTGAGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000434299.5
CDS GCA 90 bp CAGCCCCACCAAGTGTGGACACAAATGCCAGGCTTCTACCCTACCTaGCCATCCAGCCACTCTATGTCCCAAACTCCAATCCCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: QPHQVWTQMPGFYPT*PSSHSMSQTPIPER
Trigger: CCTCTCTGGGATTGGAGTTTGGGACATAGAGTGGCTGGATGGGCAGGTAGGGTAGAAGCCTGGCATTTGTGTCCACACTTGGTGGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473038.5
CDS CCA 90 bp GCTGCTTTTACCTTGGCACAAGCACAGAGCGTGAATAGGGTACTGTaGCCTGGGCTCAGTTCTGCACCCCGCCAGAGATCCAACGATCCT +
Preference number: 5 (lower is better)
Translates to: AAFTLAQAQSVNRVL*PGLSSAPRQRSNDP
Trigger: AGGATCGTTGGATCTCTGGCGGGGTGCAGAACTGAGCCCAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTGCCAAGGTAAAAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476957.5
ENST00000496999.5
CDS-3UTR CAA 90 bp ATGAATAAAGGGAGCAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGCACAGGAAGCCGCCATaGCCCCCTTGGCACAAGCAC +
Preference number: 5 (lower is better)
Translates to: MNKGSRRVTGAYPGVHTMHRKPP*PPWHKH
Trigger: GTGCTTGTGCCAAGGGGGCAATGGCGGCTTCCTGTG...CATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTGCTCCCTTTATTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS TCA 90 bp GTTACCTCCAGGCCACGTGCTTGGCAGTGGGCAATTAGCTCATTTTaGGCCAAGTATGGGTGGCATTCCACCTGCAAGACAGCTGGACGC +
Preference number: 5 (lower is better)
Translates to: VTSRPRAWQWAISSF*AKYGWHSTCKTAGR
Trigger: GCGTCCAGCTGTCTTGCAGGTGGAATGCCACCCATACTTGGCTCAAAATGAGCTAATTGCCCACTGCCAAGCACGTGGCCTGGAGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000476957.5
ENST00000487654.5
ENST00000621846.4
CDS TCA 90 bp ACCCAGGGCCCTCTCCCTAAGACTGCCCCATACCTGAGCAAGATCTaGGCTGGAGATCGGCCATACTTTTCAGCCAATGCCAGGACTACT +
Preference number: 5 (lower is better)
Translates to: TQGPLPKTAPYLSKI*AGDRPYFSANARTT
Trigger: AGTAGTCCTGGCATTGGCTGAAAAGTATGGCCGATCTCCAGCTCAGATCTTGCTCAGGTATGGGGCAGTCTTAGGGAGAGGGCCCTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475919.1
CDS CCA 90 bp TCACTTGAAACCTTGGCACAAGCACAGAGCGTGAATAGGGTACTGTaGCCTGGGCTCAGTTCTGCACCCCGCCAGAGATCCAACGATCCT +
Preference number: 5 (lower is better)
Translates to: SLETLAQAQSVNRVL*PGLSSAPRQRSNDP
Trigger: AGGATCGTTGGATCTCTGGCGGGGTGCAGAACTGAGCCCAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTGCCAAGGTTTCAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000434299.5
CDS CCA 90 bp CCAGTGTGCAGTAGAACACAGGAAGCCGCCATTGCCCCCTTTGCCTaGCTAGCTGCTGCTCATCCTTCAGCTAGCACTTCACATTTCTGG +
Preference number: 5 (lower is better)
Translates to: PVCSRTQEAAIAPFA*LAAAHPSASTSHFW
Trigger: CCAGAAATGTGAAGTGCTAGCTGAAGGATGAGCAGCAGCTAGCCAGGCAAAGGGGGCAATGGCGGCTTCCTGTGTTCTACTGCACACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000434299.5
CDS-3UTR CAA 90 bp GCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGCGAACTGGCCGGAACTaGGTCACTCACTCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: ALLTPSFRCGRTSLAAELRTGRN*VTHSAA
Trigger: CGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCG...CAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CAA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAGCCGCCATTGCCCCCTaGGCACAAGCACAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: FINSLFPLWQDLISCRAGAAIAP*AQAQSV
Trigger: CACGCTCTGTGCTTGTGCCAAGGGGGCAATGGCGGC...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000621846.4
CDS-3UTR CAA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCGCCGCCATTGCCCCCTaGGCACAAGCACAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: CSNGFINSLFPLWQDLISAAIAP*AQAQSV
Trigger: CACGCTCTGTGCTTGTGCCAAGGGGGCAATGGCGGC...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000621846.4
CDS-3UTR CAA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGTCCCATCAGCATTCTaGGGGAAGGGGTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGVPSAF*GKGLSP
Trigger: GGGAGACAACCCCTTCCCCAAGAATGCTGATGGGAC...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGGCCAGCCTCGCCTTTaGCTGGCCCACATTGCACCG +
Preference number: 5 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAGQPRL*LAHIAP
Trigger: CGGTGCAATGTGGGCCAGCAAAAGGCGAGGCTGGCC...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS TCA 90 bp CACTATTTTGTTCCCCATGCAGCTTCCCTAAGCTCCTGGAGCACCTaGGCCCTGCTGAAATGGGAAATATGCCTACAGTGGCCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: HYFVPHAASLSSWST*ALLKWEICLQWPPS
Trigger: GGAGGGAGGCCACTGTAGGCATATTTCCCATTTCAGCAGGGCTCAGGTGCTCCAGGAGCTTAGGGAAGCTGCATGGGGAACAAAATAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475919.1
CDS GCA 90 bp CCTGAGCAAGATCTGAGCTGGAGATCGGCCATACTTTTCAGCCAATaGCAGGACTACTGGTTCCTCCAGCAGGACAGGCTCATCAGGATC +
Preference number: 5 (lower is better)
Translates to: PEQDLSWRSAILFSQ*QDYWFLQQDRLIRI
Trigger: GATCCTGATGAGCCTGTCCTGCTGGAGGAACCAGTAGTCCTGGCATTGGCTGAAAAGTATGGCCGATCTCCAGCTCAGATCTTGCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000487654.5
ENST00000621846.4
CDS GCA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTaGAGAGCTGGAAGGGAGGCCAAGAAGCTGTGGTCTCAGTACGGG +
Preference number: 5 (lower is better)
Translates to: GFINSLFPLWQDLIS*RAGREAKKLWSQYG
Trigger: CCCGTACTGAGACCACAGCTTCTTGGCCTCCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000473038.5
ENST00000475919.1
ENST00000475985.1
ENST00000487654.5
ENST00000495913.5
ENST00000497973.5
ENST00000621846.4
CDS CCA 90 bp ACTAACACCATCCTGCTCAACCCCCTGATTCCCCAGATGAGGCTCTaGCAAGGCTCACTCAAAGGCATAAGGCCAGTGCATCAGGTACAG +
Preference number: 5 (lower is better)
Translates to: TNTILLNPLIPQMRL*QGSLKGIRPVHQVQ
Trigger: CTGTACCTGATGCACTGGCCTTATGCCTTTGAGTGAGCCTTGCCAGAGCCTCATCTGGGGAATCAGGGGGTTGAGCAGGATGGTGTTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471651.1
ENST00000496999.5
CDS-3UTR CAA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCCGAACTGGCCGGAACTaGGTCACTCACTCCGCAGCG +
Preference number: 5 (lower is better)
Translates to: CSNGFINSLFPLWQDLISRTGRN*VTHSAA
Trigger: CGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCG...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS-3UTR CAA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCACACAGGAAGCCGCCATaGCCCCCTTGGCACAAGCAC +
Preference number: 5 (lower is better)
Translates to: PMALLTPSFRCGRTSLAAHRKPP*PPWHKH
Trigger: GTGCTTGTGCCAAGGGGGCAATGGCGGCTTCCTGTG...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000621846.4
CDS-3UTR CAA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGACACAGGAAGCCGCCATaGCCCCCTTGGCACAAGCAC +
Preference number: 5 (lower is better)
Translates to: FINSLFPLWQDLISCRAGHRKPP*PPWHKH
Trigger: GTGCTTGTGCCAAGGGGGCAATGGCGGCTTCCTGTG...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000621846.4
CDS-3UTR CAA 90 bp CAGGAGGGTTACAGGTGCATACCCTGGGGTACACACCATGTGAGACTGCCTTCCTTGGTGTTCCACAGCTaGGATGTCACAAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: QEGYRCIPWGTHHVRLPSLVFHS*DVTNSS
Trigger: GGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAA...GGAAGGCAGTCTCACATGGTGTGTACCCCAGGGTATGCACCTGTAACCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471651.1
CDS-3UTR CAA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGTGCCGACTGTTGAAGTaGGACAGGCCCAGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: MALLTPSFRCGRTSLAAECRLLK*DRPSAC
Trigger: GCAGGCGCTGGGCCTGTCCAACTTCAACAGTCGGCA...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCATGCCGACTGTTGAAGTaGGACAGGCCCAGCGCCTGC +
Preference number: 5 (lower is better)
Translates to: PMALLTPSFRCGRTSLAACRLLK*DRPSAC
Trigger: GCAGGCGCTGGGCCTGTCCAACTTCAACAGTCGGCA...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGTCAATCTGCCGACTGTaGAAGTTGGACAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGSICRL*KLDRPS
Trigger: GCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTGA...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGTAGCAGATGCCACGTaGCAGGTTCTTCTGGTGTCG +
Preference number: 5 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGVADAT*QVLLVS
Trigger: CGACACCAGAAGAACCTGCAACGTGGCATCTGCTAC...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR CAA 90 bp ATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGTCAATCTGCCGACTGTaGAAGTTGGACAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: INSLFPLWQDLISCRAGRSICRL*KLDRPS
Trigger: GCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTGA...CCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGGGGGATCACTTGAAACCTaGGCACAAGCACAGAGCGTG +
Preference number: 5 (lower is better)
Translates to: LTPSFRCGRTSLAAELEGGSLET*AQAQSV
Trigger: CACGCTCTGTGCTTGTGCCAAGGTTTCAAGTGATCC...CCCTTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR CAA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAGTCCCATCAGCATTCTaGGGGAAGGGGTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: FINSLFPLWQDLISCRAGVPSAF*GKGLSP
Trigger: GGGAGACAACCCCTTCCCCAAGAATGCTGATGGGAC...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCGTCCCATCAGCATTCTaGGGGAAGGGGTTGTCTCCC +
Preference number: 5 (lower is better)
Translates to: CSNGFINSLFPLWQDLISVPSAF*GKGLSP
Trigger: GGGAGACAACCCCTTCCCCAAGAATGCTGATGGGAC...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp ATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGGATGCCCTGCATCCCTaGGGACTCTCTTCCCATCCA +
Preference number: 5 (lower is better)
Translates to: MALLTPSFRCGRTSLAAEDALHP*GLSSHP
Trigger: TGGATGGGAAGAGAGTCCCAAGGGATGCAGGGCATC...CTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp CCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCATCAATCTGCCGACTGTaGAAGTTGGACAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PMALLTPSFRCGRTSLAASICRL*KLDRPS
Trigger: GCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTGA...TGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp AATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGATGCCCTGCATCCCTaGGGACTCTCTTCCCATCCA +
Preference number: 5 (lower is better)
Translates to: NGFINSLFPLWQDLISCRDALHP*GLSSHP
Trigger: TGGATGGGAAGAGAGTCCCAAGGGATGCAGGGCATC...TCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCAACTCCCTCTTTCCGTaGTGGCAGGACCTCATTAGC +
Preference number: 5 (lower is better)
Translates to: CSNGFINSLFPLWQDLISNSLFP*WQDLIS
Trigger: GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTT...GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAACTCCCTCTTTCCGTaGTGGCAGGACCTCATTAGC +
Preference number: 5 (lower is better)
Translates to: FINSLFPLWQDLISCRAGNSLFP*WQDLIS
Trigger: GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTT...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp GCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTAACTCCCTCTTTCCGTaGTGGCAGGACCTCATTAGC +
Preference number: 5 (lower is better)
Translates to: APMALLTPSFRCGRTSLANSLFP*WQDLIS
Trigger: GCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTT...AGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAATTGGTGTTCCACAGCTaGGATGTCACAAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: LLTPSFRCGRTSLAAELELVFHS*DVTNSS
Trigger: GGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAA...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGATTGGTGTTCCACAGCTaGGATGTCACAAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: FINSLFPLWQDLISCRAGLVFHS*DVTNSS
Trigger: GGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAA...TCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp GGATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTCTCCCTAAAGTCAGGTaGGCTGGATTCCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: GCSNGFINSLFPLWQDLILPKVR*AGFPKF
Trigger: GAACTTTGGGAATCCAGCCAACCTGACTTTAGGGAG...AATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS-3UTR CAA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTATTGGTGTTCCACAGCTaGGATGTCACAAACAGCTCC +
Preference number: 5 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLLVFHS*DVTNSS
Trigger: GGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAA...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp GGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGAAGGAGTGATACTTTaGGGGATGCAGATCACTTTC +
Preference number: 5 (lower is better)
Translates to: GFINSLFPLWQDLISCRAEGVIL*GMQITF
Trigger: GAAAGTGATCTGCATCCCCAAAAGTATCACTCCTTC...AGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp TTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGCTGCAGAGCTGGAAGAAGGAGTGATACTTTaGGGGATGCAGATCACTTTC +
Preference number: 5 (lower is better)
Translates to: LLTPSFRCGRTSLAAELEEGVIL*GMQITF
Trigger: GAAAGTGATCTGCATCCCCAAAAGTATCACTCCTTC...TTCCAGCTCTGCAGCTAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS-3UTR CAA 90 bp GATGCTCCAATGGCTTTATTAACTCCCTCTTTCCGTTGTGGCAGGACCTCATTAGAAGGAGTGATACTTTaGGGGATGCAGATCACTTTC +
Preference number: 5 (lower is better)
Translates to: DAPMALLTPSFRCGRTSLEGVIL*GMQITF
Trigger: GAAAGTGATCTGCATCCCCAAAAGTATCACTCCTTC...TAATGAGGTCCTGCCACAACGGAAAGAGGGAGTTAATAAAGCCATTGGAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000621846.4
CDS CCA 72 bp GGGGCAGGGGCCGGGCATAAAGGATCACGCGCAGGGTaGACCGCCTTCGCCGCCTCCCGAGGAAGGACTCCG +
Preference number: 6 (lower is better)
Translates to: GAGAGHKGSRAG*TAFAASRGRTP
Trigger: CGGAGTCCTTCCTCGGGAGGCGGCGAAGGCGGTCCACCCTGCGCGTGATCCTTTATGCCCGGCCCCTGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000434299.5
ENST00000621846.4
CDS TCA 72 bp CTCCGCAGCGCGGGTTTGGAGAACTCCTGGGCACAATaGGGCAGGTGGCGCTGGCCACGTGGGCGGTGCAAG +
Preference number: 6 (lower is better)
Translates to: LRSAGLENSWAQ*GRWRWPRGRCK
Trigger: CTTGCACCGCCCACGTGGCCAGCGCCACCTGCCTCATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372070.7
ENST00000434299.5
ENST00000621846.4
CDS CCA 72 bp CGCCGCCTCCCGAGGAAGGACTCCGCAGCGCGGGTTTaGAGAACTCCTGGGCACAATGAGGCAGGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: RRLPRKDSAARV*RTPGHNEAGGA
Trigger: AGCGCCACCTGCCTCATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGAGTCCTTCCTCGGGAGGCGGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000434299.5
ENST00000621846.4
CDS TCA 72 bp GGGTGGACCGCCTTCGCCGCCTCCCGAGGAAGGACCTaGAGGGGATGGAAAACAGAGCTGGGAGGTAGTACC +
Preference number: 6 (lower is better)
Translates to: GWTAFAASRGRT*RGWKTELGGST
Trigger: GGTACTACCTCCCAGCTCTGTTTTCCATCCCCTTCAGGTCCTTCCTCGGGAGGCGGCGAAGGCGGTCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000476957.5
ENST00000496999.5
CDS CCA 72 bp GGCCGGAACTTGGTCACTCACTCCGCAGCGCGGGTTTaGAGAACTCCTGGGCACAATGAGGCAGGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: GRNLVTHSAARV*RTPGHNEAGGA
Trigger: AGCGCCACCTGCCTCATTGTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGAGTGAGTGACCAAGTTCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS CAA 90 bp GTACCGTCTCCACCTCTGGATCCTCGAGGTCGAACTGGCCGGAACTaGGTCACTCACTCCGCAGCGCGGGTTTGGAGAACTCCTGGGCAC +
Preference number: 6 (lower is better)
Translates to: VPSPPLDPRGRTGRN*VTHSAARVWRTPGH
Trigger: GTGCCCAGGAGTTCTCCAAACCCGCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCGACCTCGAGGATCCAGAGGTGGAGACGGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351829.9
ENST00000372070.7
CDS CAA 90 bp AGGGCAGGCTCCACATCCTCGGGGTGGTGCTTGGTGTTCCACAGCTaGGATGTCACAAACAGCTCCTCCCGAGGCACCGCCTTGCCTGGT +
Preference number: 6 (lower is better)
Translates to: RAGSTSSGWCLVFHS*DVTNSSSRGTALPG
Trigger: ACCAGGCAAGGCGGTGCCTCGGGAGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000621846.4
CDS CAA 90 bp GCCAGAGTCTTCCGGAGGGCAGGCTCCACATCCTCGGGGTGGTGCTaGGTGTTCCACAGCTTGGATGTCACAAACAGCTCCTCCCGAGGC +
Preference number: 6 (lower is better)
Translates to: ARVFRRAGSTSSGWC*VFHSLDVTNSSSRG
Trigger: GCCTCGGGAGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCTCCGGAAGACTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS CCA 72 bp AGTACCGTCTCCACCTCTGGATCCTCGAGGTCGAACTaGCCGGAACTTGGTCACTCACTCCGCAGCGCGGGT +
Preference number: 6 (lower is better)
Translates to: STVSTSGSSRSN*PELGHSLRSAG
Trigger: ACCCGCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCGACCTCGAGGATCCAGAGGTGGAGACGGTACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000476957.5
ENST00000496999.5
CDS CCA 72 bp GGCCAGTGCATCAGGTACAGGTCCAGATACTCCAGCTaGAGGTCAGCCAGAGTCTTCCGGAGGGCAGGCTCC +
Preference number: 6 (lower is better)
Translates to: GQCIRYRSRYSS*RSARVFRRAGS
Trigger: GGAGCCTGCCCTCCGGAAGACTCTGGCTGACCTCCAGCTGGAGTATCTGGACCTGTACCTGATGCACTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS CAA 90 bp GGACGCACGGAGGCCACACTGAGTATGTCATCAATCTGCCGACTGTaGAAGTTGGACAGGCCCAGCGCCTGCACCAGCCCCTTAGCCACC +
Preference number: 6 (lower is better)
Translates to: GRTEATLSMSSICRL*KLDRPSACTSPLAT
Trigger: GGTGGCTAAGGGGCTGGTGCAGGCGCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTGATGACATACTCAGTGTGGCCTCCGTGCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000473038.5
ENST00000476957.5
ENST00000497973.5
ENST00000621846.4
CDS CCA 72 bp CACCTCTGGATCCTCGAGGTCGAACTGGCCGGAACTTaGTCACTCACTCCGCAGCGCGGGTTTGGAGAACTC +
Preference number: 6 (lower is better)
Translates to: HLWILEVELAGT*SLTPQRGFGEL
Trigger: GAGTTCTCCAAACCCGCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCGACCTCGAGGATCCAGAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000496999.5
CDS CCA 72 bp CCCTTGGCACAAGCACAGAGCGTGAATAGGGTACTGTaGCCTGGGCTCAGTTCTGCACCCCGCCAGAGATCC +
Preference number: 6 (lower is better)
Translates to: PLAQAQSVNRVL*PGLSSAPRQRS
Trigger: GGATCTCTGGCGGGGTGCAGAACTGAGCCCAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTGCCAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000471651.1
ENST00000481885.5
ENST00000621846.4
CDS CCA 72 bp CCACATCCTCGGGGTGGTGCTTGGTGTTCCACAGCTTaGATGTCACAAACAGCTCCTCCCGAGGCACCGCCT +
Preference number: 6 (lower is better)
Translates to: PHPRGGAWCSTA*MSQTAPPEAPP
Trigger: AGGCGGTGCCTCGGGAGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000621846.4
CDS CAA 72 bp CCACCTCTGGATCCTCGAGGTCGAACTGGCCGGAACTaGGTCACTCACTCCGCAGCGCGGGTTTGGAGAACT +
Preference number: 6 (lower is better)
Translates to: PPLDPRGRTGRN*VTHSAARVWRT
Trigger: AGTTCTCCAAACCCGCGCTGCGGAGTGAGTGACCAAGTTCCGGCCAGTTCGACCTCGAGGATCCAGAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000496999.5
CDS CAA 72 bp TCCACATCCTCGGGGTGGTGCTTGGTGTTCCACAGCTaGGATGTCACAAACAGCTCCTCCCGAGGCACCGCC +
Preference number: 6 (lower is better)
Translates to: STSSGWCLVFHS*DVTNSSSRGTA
Trigger: GGCGGTGCCTCGGGAGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000621846.4
CDS CAA 90 bp CGCCGCAGGCGCTTTTCCGGGGGAAGTAAGGTAGCAGATGCCACGTaGCAGGTTCTTCTGGTGTCGGCCCTCCGGATTCACAATGCCATC +
Preference number: 6 (lower is better)
Translates to: RRRRFSGGSKVADAT*QVLLVSALRIHNAI
Trigger: GATGGCATTGTGAATCCGGAGGGCCGACACCAGAAGAACCTGCAACGTGGCATCTGCTACCTTACTTCCCCCGGAAAAGCGCCTGCGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS GCA 72 bp GTCTTCCGGAGGGCAGGCTCCACATCCTCGGGGTGGTaGTTGGTGTTCCACAGCTTGGATGTCACAAACAGC +
Preference number: 6 (lower is better)
Translates to: VFRRAGSTSSGW*LVFHSLDVTNS
Trigger: GCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCTCCGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS GCA 72 bp GGACGCACGGAGGCCACACTGAGTATGTCATCAATCTaGCGACTGTTGAAGTTGGACAGGCCCAGCGCCTGC +
Preference number: 6 (lower is better)
Translates to: GRTEATLSMSSI*RLLKLDRPSAC
Trigger: GCAGGCGCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTGATGACATACTCAGTGTGGCCTCCGTGCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000473038.5
ENST00000476957.5
ENST00000497973.5
ENST00000621846.4
CDS CCA 72 bp TCCGGAGGGCAGGCTCCACATCCTCGGGGTGGTGCTTaGTGTTCCACAGCTTGGATGTCACAAACAGCTCCT +
Preference number: 6 (lower is better)
Translates to: SGGQAPHPRGGA*CSTAWMSQTAP
Trigger: AGGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCTCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS CCA 72 bp ACCTTGGCACAAGCACAGAGCGTGAATAGGGTACTGTaGCCTGGGCTCAGTTCTGCACCCCGCCAGAGATCC +
Preference number: 6 (lower is better)
Translates to: TLAQAQSVNRVL*PGLSSAPRQRS
Trigger: GGATCTCTGGCGGGGTGCAGAACTGAGCCCAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTGCCAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372070.7
ENST00000434299.5
ENST00000476957.5
ENST00000496999.5
CDS CAA 72 bp TTCCGGAGGGCAGGCTCCACATCCTCGGGGTGGTGCTaGGTGTTCCACAGCTTGGATGTCACAAACAGCTCC +
Preference number: 6 (lower is better)
Translates to: FRRAGSTSSGWC*VFHSLDVTNSS
Trigger: GGAGCTGTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCTCCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS CAA 72 bp GAGGCCACACTGAGTATGTCATCAATCTGCCGACTGTaGAAGTTGGACAGGCCCAGCGCCTGCACCAGCCCC +
Preference number: 6 (lower is better)
Translates to: EATLSMSSICRL*KLDRPSACTSP
Trigger: GGGGCTGGTGCAGGCGCTGGGCCTGTCCAACTTCAACAGTCGGCAGATTGATGACATACTCAGTGTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000473038.5
ENST00000476957.5
ENST00000497973.5
ENST00000621846.4
CDS CAA 90 bp ATCTCAGCACCTGGGCAGGCTGAGGCGGGAGGATCACTTGAAACCTaGGCACAAGCACAGAGCGTGAATAGGGTACTGTGGCCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: ISAPGQAEAGGSLET*AQAQSVNRVLWPGL
Trigger: GAGCCCAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTGCCAAGGTTTCAAGTGATCCTCCCGCCTCAGCCTGCCCAGGTGCTGAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000434299.5
CDS CCA 72 bp AGAGTCTTCCGGAGGGCAGGCTCCACATCCTCGGGGTaGTGCTTGGTGTTCCACAGCTTGGATGTCACAAAC +
Preference number: 6 (lower is better)
Translates to: RVFRRAGSTSSG*CLVFHSLDVTN
Trigger: GTTTGTGACATCCAAGCTGTGGAACACCAAGCACCACCCCGAGGATGTGGAGCCTGCCCTCCGGAAGACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000434299.5
ENST00000471651.1
ENST00000476957.5
ENST00000481885.5
ENST00000496999.5
ENST00000497973.5
ENST00000621846.4
CDS CAA 72 bp CGCTTTTCCGGGGGAAGTAAGGTAGCAGATGCCACGTaGCAGGTTCTTCTGGTGTCGGCCCTCCGGATTCAC +
Preference number: 6 (lower is better)
Translates to: RFSGGSKVADAT*QVLLVSALRIH
Trigger: GTGAATCCGGAGGGCCGACACCAGAAGAACCTGCAACGTGGCATCTGCTACCTTACTTCCCCCGGAAAAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS CAA 72 bp CCTGGGCAGGCTGAGGCGGGAGGATCACTTGAAACCTaGGCACAAGCACAGAGCGTGAATAGGGTACTGTGG +
Preference number: 6 (lower is better)
Translates to: PGQAEAGGSLET*AQAQSVNRVLW
Trigger: CCACAGTACCCTATTCACGCTCTGTGCTTGTGCCAAGGTTTCAAGTGATCCTCCCGCCTCAGCCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000434299.5
CDS GCA 72 bp GCAGGTTCTTCTGGTGTCGGCCCTCCGGATTCACAATaGCATCCGTGGCTCCATACTCTCCCTAAAGTCAGG +
Preference number: 6 (lower is better)
Translates to: AGSSGVGPPDSQ*HPWLHTLPKVR
Trigger: CCTGACTTTAGGGAGAGTATGGAGCCACGGATGGCATTGTGAATCCGGAGGGCCGACACCAGAAGAACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372070.7
CDS GCA 72 bp GATCTGAGCTGGAGATCGGCCATACTTTTCAGCCAATaGCAGGACTACTGGTTCCTCCAGCAGGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: DLSWRSAILFSQ*QDYWFLQQDRL
Trigger: GAGCCTGTCCTGCTGGAGGAACCAGTAGTCCTGGCATTGGCTGAAAAGTATGGCCGATCTCCAGCTCAGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000487654.5
ENST00000621846.4
CDS CCA 72 bp TTTCCGCTGGACCTGCCACCTGAGCAAGATCTGAGCTaGAGATCGGCCATACTTTTCAGCCAATGCCAGGAC +
Preference number: 6 (lower is better)
Translates to: FPLDLPPEQDLS*RSAILFSQCQD
Trigger: GTCCTGGCATTGGCTGAAAAGTATGGCCGATCTCCAGCTCAGATCTTGCTCAGGTGGCAGGTCCAGCGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000487654.5
ENST00000621846.4
CDS CCA 72 bp ATCCTGCTCAACCCCCTGATTCCCCAGATGAGGCTCTaGCAAGGCTCACTCAAAGGCATAAGGCCAGTGCAT +
Preference number: 6 (lower is better)
Translates to: ILLNPLIPQMRL*QGSLKGIRPVH
Trigger: ATGCACTGGCCTTATGCCTTTGAGTGAGCCTTGCCAGAGCCTCATCTGGGGAATCAGGGGGTTGAGCAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000471651.1
ENST00000496999.5
CDS TCA 72 bp GAGGATCACTTGAAACCTTGGCACAAGCACAGAGCGTaGATAGGGTACTGTGGCCTGGGCTCAGTTCTGCAC +
Preference number: 6 (lower is better)
Translates to: EDHLKPWHKHRA*IGYCGLGSVLH
Trigger: GTGCAGAACTGAGCCCAGGCCACAGTACCCTATTCACGCTCTGTGCTTGTGCCAAGGTTTCAAGTGATCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372070.7
ENST00000434299.5
CDS TCA 72 bp CCTCTCCCTAAGACTGCCCCATACCTGAGCAAGATCTaGGCTGGAGATCGGCCATACTTTTCAGCCAATGCC +
Preference number: 6 (lower is better)
Translates to: PLPKTAPYLSKI*AGDRPYFSANA
Trigger: GGCATTGGCTGAAAAGTATGGCCGATCTCCAGCTCAGATCTTGCTCAGGTATGGGGCAGTCTTAGGGAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475919.1
CDS CCA 72 bp AGATCGGCCATACTTTTCAGCCAATGCCAGGACTACTaGTTCCTCCAGCAGGACAGGCTCATCAGGATCACG +
Preference number: 6 (lower is better)
Translates to: RSAILFSQCQDY*FLQQDRLIRIT
Trigger: CGTGATCCTGATGAGCCTGTCCTGCTGGAGGAACCAGTAGTCCTGGCATTGGCTGAAAAGTATGGCCGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000487654.5
ENST00000621846.4
CDS TCA 72 bp AGGCCACGTGCTTGGCAGTGGGCAATTAGCTCATTTTaGGCCAAGTATGGGTGGCATTCCACCTGCAAGACA +
Preference number: 6 (lower is better)
Translates to: RPRAWQWAISSF*AKYGWHSTCKT
Trigger: TGTCTTGCAGGTGGAATGCCACCCATACTTGGCTCAAAATGAGCTAATTGCCCACTGCCAAGCACGTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000351829.9
ENST00000372070.7
ENST00000476957.5
ENST00000487654.5
ENST00000621846.4
CDS GCA 72 bp CAAGTGTGGACACAAATGCCAGGCTTCTACCCTACCTaGCCATCCAGCCACTCTATGTCCCAAACTCCAATC +
Preference number: 6 (lower is better)
Translates to: QVWTQMPGFYPT*PSSHSMSQTPI
Trigger: GATTGGAGTTTGGGACATAGAGTGGCTGGATGGGCAGGTAGGGTAGAAGCCTGGCATTTGTGTCCACACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473038.5
CDS TCA 72 bp GAGGATGGAGAGTGGGGTTCAAGAAAGCCAGCTTTGTaGGCAGAAGCTGGGGTTCCACAACACTGCCTTTTT +
Preference number: 6 (lower is better)
Translates to: EDGEWGSRKPAL*AEAGVPQHCLF
Trigger: AAAAAGGCAGTGTTGTGGAACCCCAGCTTCTGCTCACAAAGCTGGCTTTCTTGAACCCCACTCTCCATCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475985.1
CDS TCA 72 bp GATCACAAGGCAAGATCCTCAGCCTCACCCAGACACTaGAATAAGAAATCCCTTAACCCTTGCCTCCCAACC +
Preference number: 6 (lower is better)
Translates to: DHKARSSASPRH*NKKSLNPCLPT
Trigger: GGTTGGGAGGCAAGGGTTAAGGGATTTCTTATTTCAGTGTCTGGGTGAGGCTGAGGATCTTGCCTTGTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475919.1