RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKNA (Homo sapiens)

Ensembl gene IDs: ENSG00000106948

Ensembl transcript IDs: ENST00000223791.7, ENST00000307564.8, ENST00000312033.3, ENST00000374075.9, ENST00000374079.8, ENST00000374088.8, ENST00000490767.1, ENST00000491133.1, ENST00000492875.1

Found 1610 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCATGGCCGCAGACCGTGCCCCAGCCCGGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACTGGGATCCTAGGAGAAGCTGGGGAC +
Preference number: 1 (lower is better)
Translates to: PHGRRPCPSPGLAGS*PLINATGILGEAGD
Trigger: GTCCCCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp CTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGG +
Preference number: 1 (lower is better)
Translates to: LELHTCRTRRDCLRF*LDRRRPRSQHLCEG
Trigger: CCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp GAGGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGA +
Preference number: 1 (lower is better)
Translates to: EVLPGPKEASLTAPL*GDWCSWEVTSLGDR
Trigger: TCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp ACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGC +
Preference number: 1 (lower is better)
Translates to: TSLMHTHSRNAEVCC*HGVGVREAAWPHGR
Trigger: GCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp CGCCACTGGGATCCTAGGAGAAGCTGGGGACCATGCGTGAGGTACTaGAGGGGACCATGGTGGATGGCATCCTGGGCACTTTGTAGCTTG +
Preference number: 1 (lower is better)
Translates to: RHWDPRRSWGPCVRY*RGPWWMASWALCSL
Trigger: CAAGCTACAAAGTGCCCAGGATGCCATCCACCATGGTCCCCTTCAGTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATCCCAGTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp CAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGC +
Preference number: 1 (lower is better)
Translates to: QTSLMHTHSRNAEVC*CHGVGVREAAWPHG
Trigger: GCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp ATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCT +
Preference number: 1 (lower is better)
Translates to: IISWSCTHAGPGETA*GSAWTEGGLAHSTS
Trigger: AGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp CTGATAAACGCCACTGGGATCCTAGGAGAAGCTGGGGACCATGCGTaGGGTACTGAAGGGGACCATGGTGGATGGCATCCTGGGCACTTT +
Preference number: 1 (lower is better)
Translates to: LINATGILGEAGDHA*GTEGDHGGWHPGHF
Trigger: AAAGTGCCCAGGATGCCATCCACCATGGTCCCCTTCAGTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp ATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCAT +
Preference number: 1 (lower is better)
Translates to: IQTSLMHTHSRNAEV*CCHGVGVREAAWPH
Trigger: ATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp TTAGCACCGGAATCAGGGTCTAGCAGGTGCTCCCTAAATGGCAGGTaGTGTTTGCTACTGAAAGTACTGGAAGGCTGGGCGCCATGGCTC +
Preference number: 1 (lower is better)
Translates to: LAPESGSSRCSLNGR*CLLLKVLEGWAPWL
Trigger: GAGCCATGGCGCCCAGCCTTCCAGTACTTTCAGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTGCTAGACCCTGATTCCGGTGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR GCA 90 bp TGCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATaGAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGC +
Preference number: 1 (lower is better)
Translates to: CLKYTNIIDAHTFQK*RGMLLPRGRGAGGG
Trigger: GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp ACCCAAAATCATTTCAAGGGCTATCAGTGGTATACATTCCACACTTaGAGAGGCAGGACAGGTAAGCCATGTCTAAACTGTGAAGCGCTG +
Preference number: 1 (lower is better)
Translates to: TQNHFKGYQWYTFHT*RGRTGKPCLNCEAL
Trigger: CAGCGCTTCACAGTTTAGACATGGCTTACCTGTCCTGCCTCTTCAAGTGTGGAATGTATACCACTGATAGCCCTTGAAATGATTTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
3UTR-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 2 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGACTGATAAACGCCACTaGGATCCTAGGAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQTDKRH*DPRRSW
Trigger: CCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: LPVTRRKVSGYALPSDACAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CAA 90 bp CAGCACCTCTGTGAGGGGACTGGTGCTCCTGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCCCCTCCACTTGGAAAGCACAGGGAC +
Preference number: 2 (lower is better)
Translates to: QHLCEGTGAPGKSLL*VTELTPPPLGKHRD
Trigger: GTCCCTGTGCTTTCCAAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCCTCACAGAGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LPVTRRKVSGYALPSDACRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 2 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: ASWALCSLSEGKASAAIERRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LPVTRRKVSGYALPSDACPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: PDILKCPTDYQSLGERSPSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 2 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CAA 90 bp AGAGGGAGGCAGGCAGAGCACCCAACAGGTCCCCTGGGAAAGGGCTaGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAG +
Preference number: 2 (lower is better)
Translates to: RGRQAEHPTGPLGKG*AGHQTYHPINLTLK
Trigger: CTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGGGTGCTCTGCCTGCCTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: ASWALCSLSEGKASAAIEMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: LPVTRRKVSGYALPSDACRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: SWALCSLSEGKASAAIEKDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 2 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 2 (lower is better)
Translates to: SWALCSLSEGKASAAIEKIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CAA 90 bp AAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATaGAAGGCAAAAGTTAATGACATACAGCAGAGACACGGATGGCTT +
Preference number: 2 (lower is better)
Translates to: KGLAGHQTYHPINLT*KAKVNDIQQRHGWL
Trigger: AAGCCATCCGTGTCTCTGCTGTATGTCATTAACTTTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 2 (lower is better)
Translates to: PDILKCPTDYQSLGERSPIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 2 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGGGACCATGGTGGATaGCATCCTGGGCACTTTGTA +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGDHGG*HPGHFV
Trigger: TACAAAGTGCCCAGGATGCCATCCACCATGGTCCCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTTATACATTCCACACTTaGAGAGGCAGGACAGGTAAG +
Preference number: 2 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTYTFHT*RGRTGK
Trigger: CTTACCTGTCCTGCCTCTTCAAGTGTGGAATGTATA...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
3UTR-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp GCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: AGGTCAGGRPSW*GTMRAFWASAA
Trigger: AGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTGGGCACTTTGTAGCTaGTCTGAGGGAAAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQWALCS*SEGKAS
Trigger: AGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CCA 72 bp CGCAGACCGTGCCCCAGCCCGGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACTGGGATCCTAGGAGAA +
Preference number: 3 (lower is better)
Translates to: RRPCPSPGLAGS*PLINATGILGE
Trigger: TTCTCCTAGGATCCCAGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCCCGGGCTGGGGCACGGTCTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp CACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCTCGCTCACAGCACCTC +
Preference number: 3 (lower is better)
Translates to: HTCRTRRDCLRF*LDRRRPRSQHL
Trigger: GAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp ATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: MHTHSRNAEVCC*HGVGVREAAWP
Trigger: AGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp CCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGGGAAGTCACTTCTCTT +
Preference number: 3 (lower is better)
Translates to: PGPKEASLTAPL*GDWCSWEVTSL
Trigger: AAGAGAAGTGACTTCCCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp TGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAAGGAGGCCTCGCTCAC +
Preference number: 3 (lower is better)
Translates to: WSCTHAGPGETA*GSAWTEGGLAH
Trigger: GTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp CCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGACAGGTTTGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: PAMPFPVMLAPE*LVTGGGQVCSR
Trigger: TCTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp TTGATGCACACACATTCCAGAAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGG +
Preference number: 3 (lower is better)
Translates to: LMHTHSRNAEVC*CHGVGVREAAW
Trigger: CCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp GCCACTGGGATCCTAGGAGAAGCTGGGGACCATGCGTaGGGTACTGAAGGGGACCATGGTGGATGGCATCCT +
Preference number: 3 (lower is better)
Translates to: ATGILGEAGDHA*GTEGDHGGWHP
Trigger: AGGATGCCATCCACCATGGTCCCCTTCAGTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATCCCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp TCATTGATGCACACACATTCCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCC +
Preference number: 3 (lower is better)
Translates to: SLMHTHSRNAEV*CCHGVGVREAA
Trigger: GGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 3 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAACCGTAGGCCTTTCTaGTCTGGCCCCCTAAAGAGG +
Preference number: 3 (lower is better)
Translates to: PVTRRKVSGYALPSDACPNRRPF*SGPLKR
Trigger: CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp GATCCTAGGAGAAGCTGGGGACCATGCGTGAGGTACTaGAGGGGACCATGGTGGATGGCATCCTGGGCACTT +
Preference number: 3 (lower is better)
Translates to: DPRRSWGPCVRY*RGPWWMASWAL
Trigger: AAGTGCCCAGGATGCCATCCACCATGGTCCCCTTCAGTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 3 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp AGAGTGAGGGTCCTGAGGGTTAGCACATGGACTGTGTaGAGCAGACAATGCCCAGTGCTTAGCACCGGAATC +
Preference number: 3 (lower is better)
Translates to: RVRVLRVSTWTV*SRQCPVLSTGI
Trigger: GATTCCGGTGCTAAGCACTGGGCATTGTCTGCTTCACACAGTCCATGTGCTAACCCTCAGGACCCTCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR GCA 72 bp GGACACATGTCACCCTGGGGCCCTGACATCCTAAAATaGCCCACTGACTACCAGTCACTAGGAGAAAGGTCT +
Preference number: 3 (lower is better)
Translates to: GHMSPWGPDILK*PTDYQSLGERS
Trigger: AGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp GAATCAGGGTCTAGCAGGTGCTCCCTAAATGGCAGGTaGTGTTTGCTACTGAAAGTACTGGAAGGCTGGGCG +
Preference number: 3 (lower is better)
Translates to: ESGSSRCSLNGR*CLLLKVLEGWA
Trigger: CGCCCAGCCTTCCAGTACTTTCAGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTGCTAGACCCTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR GCA 72 bp GCCCAGTGCTTAGCACCGGAATCAGGGTCTAGCAGGTaGTCCCTAAATGGCAGGTGCTGTTTGCTACTGAAA +
Preference number: 3 (lower is better)
Translates to: AQCLAPESGSSR*SLNGRCCLLLK
Trigger: TTTCAGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTGCTAGACCCTGATTCCGGTGCTAAGCACTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 3 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp TATACAAACATCATTGATGCACACACATTCCAGAAATaGAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCG +
Preference number: 3 (lower is better)
Translates to: YTNIIDAHTFQK*RGMLLPRGRGA
Trigger: CGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp CCAGGTGCATACTCTTGTAGACAGCAACTTGCTGTGTaGCTCATTTACATCTCTGGCCTCAGTCAAAAGGGA +
Preference number: 3 (lower is better)
Translates to: PGAYSCRQQLAV*LIYISGLSQKG
Trigger: TCCCTTTTGACTGAGGCCAGAGATGTAAATGAGGCACACAGCAAGTTGCTGTCTACAAGAGTATGCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR TCA 72 bp CATTTCAAGGGCTATCAGTGGTATACATTCCACACTTaGAGAGGCAGGACAGGTAAGCCATGTCTAAACTGT +
Preference number: 3 (lower is better)
Translates to: HFKGYQWYTFHT*RGRTGKPCLNC
Trigger: ACAGTTTAGACATGGCTTACCTGTCCTGCCTCTTCAAGTGTGGAATGTATACCACTGATAGCCCTTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312033.3
3UTR CCA 72 bp ATCTGTCCATCTGTATATAAAATACCTATTATTAGCTaGAGTTGCACACATGCAGGACCAGGAGAGACTGCC +
Preference number: 3 (lower is better)
Translates to: ICPSVYKIPIIS*SCTHAGPGETA
Trigger: GGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATACAGATGGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCAGGTCTCCTCCAGGTaGGGCCCACCGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQQVSSR*GPPPRC
Trigger: GCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQSSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTGCGGACTTGGTGCCTaGAGGGTGGGGTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQCGLGA*RVGWHA
Trigger: GGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGCCTGGTCTCGCCCTaGCCTGGTGAGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGLVSP*PGEQEA
Trigger: AGCTTCCTGCTCACCAGGGCAGGGCGAGACCAGGCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCCACACAGGGGACACTaGAGGGTATCAGCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQPHRGH*RVSAGG
Trigger: GCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQEGAQR*RFPPGW
Trigger: CCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQAPRRS*SMVFSA
Trigger: GGCCGAGAACACCATTGACCAGCTACGCCTCGGGGC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGGGCGGCAGGTGCTaGTGGGCCAGGCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRGGRC*WARRKS
Trigger: GGACTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTGCCGCGTTGGCCTaGGCTGGGGATTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPAALA*AGDSGG
Trigger: GCCCCCTGAATCCCCAGCCCAGGCCAACGCGGCAGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGCAGCCTTCAGCCGCTaGAAGCCCTTGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQAAFSR*KPLTWS
Trigger: GGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGACTTTGGTGGGATGCTaGGGACTTGGTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQTLVGC*GLGAWR
Trigger: CCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQRDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGGGACAGGAGACTGTaGCATTGCCTTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGDRRL*HCLLGP
Trigger: CGGTCCCAAAAGGCAATGGCACAGTCTCCTGTCCCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGCCTGCTTGCTCCTCTaGTTGGGGCTGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQACLLL*LGLGVE
Trigger: TTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCAGGC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCGACGACCCCGCCTaGTTGCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGDDPA*LLLCLG
Trigger: CCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTCGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCATCTATCTGTGGCATaGTGCGGACTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQHLSVA*CGLWAG
Trigger: CCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQRTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTTGGTGCCTGGAGGGTaGGGTGGCACGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLVPGG*GGTPGP
Trigger: AGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGAGGCCCACTTGGGCTaGAGAGGTACCTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQEAHLG*RGTSVL
Trigger: AAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTATCGGGCTGCGGGTGTaGGTCCCACTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLIGLRV*VPLQGR
Trigger: CCGCCCCTGGAGTGGGACCCACACCCGCAGCCCGAT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGCTTGCTCAGGCGTCTaGAATTCTTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQACSGV*NSWGTL
Trigger: CAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGCAGGTGCGTTGGCTaGTGGAGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGRCVG*WRQGRA
Trigger: AGCCCTGCCCTGCCTCCATCAGCCAACGCACCTGCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCAGCTCCTTGTGCCTaGGTCGGGCCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLAAPCA*VGPGGP
Trigger: AGGACCCCCTGGCCCGACTCAGGCACAAGGAGCTGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGTCTCTAGCCAGGGATaGCTGGAAACCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQVSSQG*LETWWL
Trigger: AAGCCACCAGGTTTCCAGGCATCCCTGGCTAGAGAC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPTLSAA*TARLRA
Trigger: GGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTCCAGGGGCGGCAGGTaGTGCTGGGCCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEASRGGR*CWARRK
Trigger: CTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCTGGA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLHRALP*EDPGGL
Trigger: GAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTTTGGTGCCTGGAGGGTaGGGTGGCACGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLVPGG*GGTPGP
Trigger: AGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAA...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGCGGACTTGGTGCCTaGAGGGTGGGGTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCGLGA*RVGWHA
Trigger: GGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGMLRT*CLEGGV
Trigger: CACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGAATCAGAGAACCCCTaGCCTTGGGGTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQESENP*PWGRKL
Trigger: GAGCTTCCTACCCCAAGGCCAGGGGTTCTCTGATTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLGRRSQ*VPCDST
Trigger: GGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCTGTGGGCGGCCACTTaGCAGCTGGTTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLWAAT*QLVGLR
Trigger: CCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGTGGGGGAGAGGCTGTaGGCGGCCACTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGVGERL*AATWQL
Trigger: CAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCAC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCAGGGCAGGAGGTCTTaGTGGCTGGCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGQGRRS*WLAWGL
Trigger: AAGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCTTGGGGCTGGGAGTTaGAGATGCTTTTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQLGAGS*RCFSPR
Trigger: ACGAGGAGAAAAGCATCTTCAACTCCCAGCCCCAAG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCTGACTCGGAATCCTaGTGCCCATCGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPDSES*CPSGCG
Trigger: CCCGCAGCCCGATGGGCATCAGGATTCCGAGTCAGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCAGGGTCACCAAGATaGCAAGTGGCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPGSPR*QVAGPG
Trigger: CCCTGGCCCTGCCACTTGGCATCTTGGTGACCCTGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223791.7
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCTTGGCTCCGGGGTGTaGTGGGCTCTGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLGSGV*WALWLF
Trigger: GAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAACCGCCATCTCGGCTaGCAGTGTCCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGNRHLG*QCPLQA
Trigger: AGCCTGGAGCGGACACTGGCAGCCGAGATGGCGGTT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGCGACGACCCCGCCTaGTTGCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGDDPA*LLLCLG
Trigger: CCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTCGCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCTGCCCTGCCGCGTTaGCCTGGGCTGGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPALPR*PGLGIQ
Trigger: CTGAATCCCCAGCCCAGGCCAACGCGGCAGGGCAGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGTACCTCTGTGCTTaGCTCCGGGGTGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRYLCA*LRGVLG
Trigger: GCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPERPT*AGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGCGGGGGCTGGGGGTaGGCTGATTGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGGGWG*ADCLVG
Trigger: CCCAACAAGACAATCAGCCCACCCCCAGCCCCCGCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGCTCACAGATGGCCTaGTCTCGCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSSQMA*SRPALV
Trigger: CACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCGGGCTGCCCTGGAGTaGCTGGTGCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGRAALE*LVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPDVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGTGGGGGAGAGGCTGTaGGCGGCCACTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAVGERL*AATWQL
Trigger: CAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCAC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGTGGCTGGGGCCCTCTaGCAAGGTTTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLVAGAL*QGFCQG
Trigger: GCCCTGGCAGAAACCTTGCCAGAGGGCCCCAGCCAC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGCAGGTGCGTTGGCTaGTGGAGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGRCVG*WRQGRA
Trigger: AGCCCTGCCCTGCCTCCATCAGCCAACGCACCTGCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCAGGGCAGGAGGTCTTaGTGGCTGGCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLQGRRS*WLAWGL
Trigger: AAGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGAACTCTGCTTGTTTCTaGGCCCACAAAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQNSACF*AHKATV
Trigger: GACAGTGGCTTTGTGGGCTCAGAAACAAGCAGAGTT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLIGPGR*PCLAIQ
Trigger: CTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAAT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCAGTGGGTCCCCTGTaGCAGCACCACCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPVGPL*QHHPHP
Trigger: AGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCTCTGGGCCCCCAGTaGAGTCAGAAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPLGPQ*SQKRQE
Trigger: CTCCTGCCTCTTCTGACTTCACTGGGGGCCCAGAGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCTGGGCTGGGGGAGCTaGGGAGTCCTGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLGWGS*GVLEFH
Trigger: ATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCAGTGCCTGGGTCTaGTCTGCTGAGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLASAWV*SAEDWS
Trigger: GGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGACCCTGGTGGCCTCTaGTTTCCCTGGAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDPGGL*FPWSCS
Trigger: GCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLKLGAL*RRGPLG
Trigger: CCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGAACCGCCATCTCGGCTaGCAGTGTCCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLNRHLG*QCPLQA
Trigger: AGCCTGGAGCGGACACTGGCAGCCGAGATGGCGGTT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGGGCGGCAGGTGCTaGTGGGCCAGGCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRGGRC*WARRKS
Trigger: GGACTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCACCATTCCCGTGTaGATGCTGTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGTIPV*MLWLGW
Trigger: CCAGCCCAACCACAGCATCCACACGGGAATGGTGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPFQASP*SRQAAG
Trigger: CCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAGCAGGCAGGTGCGTTaGCTGATGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSRQVR*LMEAGQ
Trigger: CTGCCCTGCCTCCATCAGCCAACGCACCTGCCTGCT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPHRALP*EDPGGL
Trigger: GAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACAGGTCTCCTCCAGGTaGGGCCCACCGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIQVSSR*GPPPRC
Trigger: GCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGCCACTGTCTGTCTCTaGGGACGCCATCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGATVCL*GRHPGL
Trigger: GAGACCTGGATGGCGTCCCCAGAGACAGACAGTGGC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTGCTGTGCTGATGTaGGAGAGCCGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPAVLM*ESRCSG
Trigger: TCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGCCCTGGAGTGGCTaGTGCAGGCTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLPWSG*CRLSSS
Trigger: GCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTCCTCTGCTTGGGGCTaGGAGTTGAAGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQSSAWG*ELKMLF
Trigger: GAAAAGCATCTTCAACTCCCAGCCCCAAGCAGAGGA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCACCCATCTGCCTCTaGGCCCCCAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPPICL*APSEVR
Trigger: TCTGACTTCACTGGGGGCCCAGAGGCAGATGGGTGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGTGCGGGAGGCGGCCTaGCCTCATGGCCGCAGACCG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVVREAA*PHGRRP
Trigger: CGGTCTGCGGCCATGAGGCCAGGCCGCCTCCCGCAC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCCCCAGAGTCACCGCTaGTTCCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLPQSHR*FLSASA
Trigger: GGCCGATGCTGACAGGAACCAGCGGTGACTCTGGGG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGCATGCTGCGGACTCTaGGCTGGGGGAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAACCGL*AGGAEE
Trigger: CTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGGTGGGTGGATCACCTaGGGCTGGGAGTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLGGWIT*GWECKI
Trigger: GATCTTGCACTCCCAGCCTCAGGTGATCCACCCACC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTAGGGAAGGGCTGGGGTaGTGCAGAGGGCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLREGLG*CRGLGA
Trigger: GGCCCCAAGCCCTCTGCATCACCCCAGCCCTTCCCT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGTGACGTCTTTGTCTaGTTCCAGATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGDVFV*FQMCSL
Trigger: CAAGGAACACATCTGGAAGCAGACAAAGACGTCACC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGCTGCTTCTCCACTaGTCAACAGCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGLLLH*STAPPA
Trigger: TGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGGCTGCCTCAGCCTTaGCCAGGCCTGACATGTGCC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGLPQP*PGLTCA
Trigger: GGCACATGTCAGGCCTGGGCAAGGCTGAGGCAGCCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGEVPL*LAPGCA
Trigger: AGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAKLGAL*RRGPLG
Trigger: CCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTT...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPRDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGGACAGGAGACTGTaGCATTGCCTTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGDRRL*HCLLGP
Trigger: CGGTCCCAAAAGGCAATGGCACAGTCTCCTGTCCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGCGAGCTTCTCATCTaGCTGGTGGTAGAGCGGACG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSELLI*LVVERT
Trigger: CGTCCGCTCTACCACCAGGCAGATGAGAAGCTCGCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGNAEVC*CHGVGV
Trigger: CACCCCTACCCCGTGGCAGCAGCATACCTCTGCATT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPNAEVC*CHGVGV
Trigger: CACCCCTACCCCGTGGCAGCAGCATACCTCTGCATT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGCTCACTGTCCCACTaGTCCAGGACCTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGSLSH*SRTLPG
Trigger: GCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGACCCTGGTGATAGGGTaGGCAGGAGGCGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGTLVIG*AGGVSF
Trigger: AAAGGACACGCCTCCTGCCCACCCTATCACCAGGGT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAAGACCTTGGTCCCCTaGGGCACCATTCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLKTLVP*GTIPVW
Trigger: CCACACGGGAATGGTGCCCCAGGGGACCAAGGTCTT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTTTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLFQASP*SRQAAG
Trigger: CCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAA...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCACATTTACGTGCAATaGGCAGGGGCCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGHIYVQ*AGASAG
Trigger: GCCAGCACTGGCCCCTGCCCATTGCACGTAAATGTG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCATTCTCATGGCTTCTaGGAGAGACTTCACACTGAG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQHSHGF*ERLHTE
Trigger: CTCAGTGTGAAGTCTCTCCCAGAAGCCATGAGAATG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCAGGTCTCCTCCAGGTaGGGCCCACCGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVQVSSR*GPPPRC
Trigger: GCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCTCGCTGCCTTCCTaGAGGGACAATCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGSLPS*RDNLLF
Trigger: GAAGAGCAGATTGTCCCTCCAGGAAGGCAGCGAGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGAAGGTGACCCTGTCTaGCCATCCAGCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGEGDPV*PSSTAH
Trigger: GTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEADVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCTGTGGGCGGCCACTTaGCAGCTGGTTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLWAAT*QLVGLR
Trigger: CCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCCACCCATCTGCCTCTaGGCCCCCAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLPPICL*APSEVR
Trigger: TCTGACTTCACTGGGGGCCCAGAGGCAGATGGGTGG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTAGGAGCTCGGGGCTaGTGGCATTGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLGARG*WHWERV
Trigger: GACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRLSLG*SRLTVP
Trigger: TGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCTTAGGAGGTGGTGGCTaGGGCCCTCTGGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLGGGG*GPLARF
Trigger: AAACCTTGCCAGAGGGCCCCAGCCACCACCTCCTAA...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGGCTTAGGAGGTGGTaGCTGGGGCCCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGLRRW*LGPSGK
Trigger: CTTGCCAGAGGGCCCCAGCCACCACCTCCTAAGCCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTGGGTGAGTATCCCCTaGTGCCGCCTCCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGWVSIP*CRLQQT
Trigger: TGTCTGCTGGAGGCGGCACCAGGGGATACTCACCCA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR TCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGCTTGCTCAGGCGTCTaGAATTCTTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGACSGV*NSWGTL
Trigger: CAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGCTCTGGAGTCTGGGTaGGGGGTGAAACTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLALESG*GVKLCL
Trigger: CAAGCAGAGTTTCACCCCTCACCCAGACTCCAGAGC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGCTCTGGAGTCTGGGTaGGGGGTGAAACTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGALESG*GVKLCL
Trigger: CAAGCAGAGTTTCACCCCTCACCCAGACTCCAGAGC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCTCTGGGCCCCCAGTaGAGTCAGAAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPLGPQ*SQKRQE
Trigger: CTCCTGCCTCTTCTGACTTCACTGGGGGCCCAGAGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCTGACTCGGAATCCTaGTGCCCATCGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPDSES*CPSGCG
Trigger: CCCGCAGCCCGATGGGCATCAGGATTCCGAGTCAGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGGCTGCTTCTCCACTaGTCAACAGCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGLLLH*STAPPA
Trigger: TGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGRRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGCCAGTGCCTGGGTCTaGTCTGCTGAGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPASAWV*SAEDWS
Trigger: GGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGGCTGCCTCAGCCTTaGCCAGGCCTGACATGTGCC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGLPQP*PGLTCA
Trigger: GGCACATGTCAGGCCTGGGCAAGGCTGAGGCAGCCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLQAEVG*PLPERP
Trigger: GGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCTGGCCATCCAGCACTaGCCACCCCTCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLLAIQH*PPLSFH
Trigger: ATGGAAAGAGAGGGGTGGGCAGTGCTGGATGGCCAG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTCGAGCTGGATGGAGTaGCGGTGTCTCCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPSSWME*RCLRAG
Trigger: ACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIETLSAA*TARLRA
Trigger: GGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPTLSAA*TARLRA
Trigger: GGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGAGCGAGCTTCTCATCTaGCTGGTGGTAGAGCGGACG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLSELLI*LVVERT
Trigger: CGTCCGCTCTACCACCAGGCAGATGAGAAGCTCGCT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLAEVCC*HGVGVR
Trigger: CCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLNAEVC*CHGVGV
Trigger: CACCCCTACCCCGTGGCAGCAGCATACCTCTGCATT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRNAEV*CCHGVG
Trigger: CCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGCTCATGGGAACTTaGTGGGCTGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRLMGT*WAVHIL
Trigger: GAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTACTGCTCCAGGACCTTaGCGGGCTGAGTTCAACGGA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLTAPGP*RAEFNG
Trigger: TCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGAATTCCATGGGGGTTaGCCGAGCAACACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLEFHGG*PSNTAS
Trigger: GGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCCTGCCGCGTTGGCCTaGGCTGGGGATTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRPAALA*AGDSGG
Trigger: GCCCCCTGAATCCCCAGCCCAGGCCAACGCGGCAGG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGCGTAGCTGGTCAATaGTGTTCTCGGCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGVAGQ*CSRPQR
Trigger: ACGCTGAGGCCGAGAACACCATTGACCAGCTACGCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGCAGAGCGGGGCTGTaGGATGGTGAAGGACAAGAC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCRAGL*DGEGQD
Trigger: GTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTGGCCAGGAACTGGCTaGCCTGAGAAGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAWPGTG*PEKPVP
Trigger: AGGCACTGGCTTCTCAGGCCAGCCAGTTCCTGGCCA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCAAAGGACTCCACCTTaGCCAGGAACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLQRTPP*PGTGWP
Trigger: AGGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCTCAGGCTCTTGCTaGGTCTGGTCTATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGSGSC*VWSMCS
Trigger: GGAACACATAGACCAGACCCAGCAAGAGCCTGAGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPHRALP*EDPGGL
Trigger: GAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGMLRT*CLEGGV
Trigger: CACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGTGCAAAGGCTTCTGTaGAAGGCGCTCAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGVQRLL*KALRDA
Trigger: GGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCAC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCAGGTCTCCTCCAGGTaGGGCCCACCGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRQVSSR*GPPPRC
Trigger: GCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGAAGCTCCATCCCTaGGCACAGATGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRKLHP*AQMQQR
Trigger: CCTTTGCTGCATCTGTGCCCAGGGATGGAGCTTCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAGGTACCTCTGTGCTTaGCTCCGGGGTGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPRYLCA*LRGVLG
Trigger: GCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGAGGCCCACTTGGGCTaGAGAGGTACCTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLEAHLG*RGTSVL
Trigger: AAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPPERPT*AGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTTGCAGCTCACAGATaGCCTGGTCTCGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLAAHR*PGLALP
Trigger: GGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTGCCCTGGAGTGGCTaGTGCAGGCTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLPWSG*CRLSSS
Trigger: GCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCATCCCGAGCTGCCTGTaGACTGTCCTTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPIPSCL*TVLGGL
Trigger: AAGACCACCAAGGACAGTCCACAGGCAGCTCGGGAT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTTAGGGGACAGAACATaGTATTCGTGGCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQLGDRT*YSWPVY
Trigger: ATACACAGGCCACGAATACCATGTTCTGTCCCCTAA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTGGACCATCTGCCTCTaGGGGAGACCCAACTTGACC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGWTICL*GRPNLT
Trigger: GGTCAAGTTGGGTCTCCCCCAGAGGCAGATGGTCCA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGGACCATCTGCCTCTaGGGGAGACCCAACTTGACC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLWTICL*GRPNLT
Trigger: GGTCAAGTTGGGTCTCCCCCAGAGGCAGATGGTCCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEASLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGCTTGCTCCTCTGCTTaGGGCTGGGAGTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPACSSA*GWELKM
Trigger: CATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGTGGGCGGCCACTTaGCAGCTGGTTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLWAAT*QLVGLR
Trigger: CCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGTGGGGGAGAGGCTGTaGGCGGCCACTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVVGERL*AATWQL
Trigger: CAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCAC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCCAGGTCGAGCTGGATaGAGTGCCGGTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLPGRAG*SAGVSG
Trigger: CCCGGAGACACCGGCACTCCATCCAGCTCGACCTGG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCAGGTCGAGCTGGATaGAGTGCCGGTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPGRAG*SAGVSG
Trigger: CCCGGAGACACCGGCACTCCATCCAGCTCGACCTGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGGACCATGGTGGATaGCATCCTGGGCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGDHGG*HPGHFV
Trigger: TACAAAGTGCCCAGGATGCCATCCACCATGGTCCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCCCAGAGTCACCGCTaGTTCCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPQSHR*FLSASA
Trigger: GGCCGATGCTGACAGGAACCAGCGGTGACTCTGGGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTCATGGGAACTTGCTaGGCTGTCCACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLMGTC*AVHILC
Trigger: GCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGGCTGGTGTTTCCATaGCCTTCCAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGLVFP*PSKLRP
Trigger: TGGTCTCAGCTTGGAAGGCCATGGAAACACCAGCCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCATGCCCAAGAGCCATaGGGCTGGTGTTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGHAQEP*GWCFHG
Trigger: GCCATGGAAACACCAGCCCCATGGCTCTTGGGCATG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLRLSLG*SRLTVP
Trigger: TGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGTGGCTGGGGCCCTCTaGCAAGGTTTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPVAGAL*QGFCQG
Trigger: GCCCTGGCAGAAACCTTGCCAGAGGGCCCCAGCCAC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTTAGGAGGTGGTGGCTaGGGCCCTCTGGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLGGGG*GPLARF
Trigger: AAACCTTGCCAGAGGGCCCCAGCCACCACCTCCTAA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGCTTAGGAGGTGGTaGCTGGGGCCCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGLRRW*LGPSGK
Trigger: CTTGCCAGAGGGCCCCAGCCACCACCTCCTAAGCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAAAGTACTGGAAGGCTaGGCGCCATGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGKVLEG*APWLTP
Trigger: AGGCGTGAGCCATGGCGCCCAGCCTTCCAGTACTTT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCACAGATGGCCTGGCTaGTGGCCCCTGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLHRWPG*WPLDSW
Trigger: CCAGGAGTCCAGGGGCCACCAGCCAGGCCATCTGTG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLPQRTW*GACGSL
Trigger: AAGACTACCACAGGCTCCTCACCAAGTACGCTGAGG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACAGGGCAGGAGGTCTTaGTGGCTGGCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIQGRRS*WLAWGL
Trigger: AAGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCCTTGCCCAGGCCTaGCATGTGCCCGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSLAQA*HVPVSS
Trigger: GCTAGAGACGGGCACATGTCAGGCCTGGGCAAGGCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGCTGGGGGTGGGCTaGTTGTCTTGTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGLGVG*LSCWEG
Trigger: CCCTTCCCAACAAGACAATCAGCCCACCCCCAGCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGGCTGGGGGTGGGCTaGTTGTCTTGTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGLGVG*LSCWEG
Trigger: CCCTTCCCAACAAGACAATCAGCCCACCCCCAGCCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCTCTGGGCCCCCAGTaGAGTCAGAAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPLGPQ*SQKRQE
Trigger: CTCCTGCCTCTTCTGACTTCACTGGGGGCCCAGAGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEALCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTCCCGAAGTCTCTCCTaGCTCGGAATCCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEASRSLS*LGILMP
Trigger: GGGCATCAGGATTCCGAGTCAGGAGAGACTTCGGGA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGTCAGTCATGTCCAGCTaGCGGCCCTGCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVSVMSS*RPCWGS
Trigger: GCTCCCCCAGCAGGGCCGTCAGCTGGACATGACTGA...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGCAAGAGAATCACTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGKRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGTGATTCTCTTGCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAGGGTGATAGGACCATaGGCCCGAGGCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPRVIGP*ARGPDV
Trigger: GACATCAGGGCCTCGGGCTCATGGTCCTATCACCCT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLVLCQG*FSTAQQ
Trigger: CTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGAC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTGGCAGGGCCAGGGCTaGCCCCAGGCTGAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDWQGQG*PQAEAA
Trigger: TGCGGCCTCAGCCTGGGGGCAGCCCTGGCCCTGCCA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223791.7
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGCCAGTGCCTGGGTCTaGTCTGCTGAGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLASAWV*SAEDWS
Trigger: GGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGCCTCCAGCTCCCTaGGAGGATCAAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLPPAP*EDQIFQ
Trigger: CTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCAGACGGTATATCTCTaGCTCCAGCTCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAQTVYL*LQLPAR
Trigger: CCTCGCAGGGAGCTGGAGGCAGAGATATACCGTCTG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLTSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCTGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPCFPWS*SHPINF
Trigger: GAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCA...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGACCCTGGTGGCCTCTaGTTTCCCTGGAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPDPGGL*FPWSCS
Trigger: GCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGACTACTTTGGTGGGATaGTGCGGACTTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLTTLVG*CGLGAW
Trigger: CCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLEGAQR*RFPPGW
Trigger: CCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGPPPR*KGFCGR
Trigger: CCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGEVPL*LAPGCA
Trigger: AGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACCGCCATCTCGGCTaGCAGTGTCCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPINRHLG*QCPLQA
Trigger: AGCCTGGAGCGGACACTGGCAGCCGAGATGGCGGTT...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCCTGGTCTCGCCCTaGCCTGGTGAGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGLVSP*PGEQEA
Trigger: AGCTTCCTGCTCACCAGGGCAGGGCGAGACCAGGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEARDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCTTTCCATCCCGAGCTaGCTGTGGACTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLLSIPS*LWTVLG
Trigger: ACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATCGAGCTGGATGGAGTaGCGGTGTCTCCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSSWME*RCLRAG
Trigger: ACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTCGAGCTGGATGGAGTaGCGGTGTCTCCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSSWME*RCLRAG
Trigger: ACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCTCACTGTCCCACTaGTCCAGGACCTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGSLSH*SRTLPG
Trigger: GCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGCTCCACCACCGTCCTaGCGACCCAGTTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIAPPPS*RPSFRG
Trigger: TCCCCTGAAACTGGGTCGGCAGGACGGTGGTGGAGC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLAPRRS*SMVFSA
Trigger: GGCCGAGAACACCATTGACCAGCTACGCCTCGGGGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCAAAGGACTCCACCTTaGCCAGGAACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAQRTPP*PGTGWP
Trigger: AGGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGCTCAGGCTCTTGCTaGGTCTGGTCTATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGSGSC*VWSMCS
Trigger: GGAACACATAGACCAGACCCAGCAAGAGCCTGAGCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCCTCTGCTTTCCCTaGAGTTGCAGCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGLCFP*SCSHPI
Trigger: GATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGATACCATCTTCTCCGTaGCCTCCTCCAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPIPSSP*PPPGEP
Trigger: GGGCTCCCCTGGAGGAGGCCACGGAGAAGATGGTAT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTAGCCAGGGATGCCTaGAAACCTGGTGGCTTCATA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLARDA*KPGGFI
Trigger: TATGAAGCCACCAGGTTTCCAGGCATCCCTGGCTAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGTGCAAAGGCTTCTGTaGAAGGCGCTCAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGVQRLL*KALRDA
Trigger: GGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCAC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCTCTGTGGCTCTTCTaGGAATCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLALWLF*ESENPW
Trigger: CCAGGGGTTCTCTGATTCCCAGAAGAGCCACAGAGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCTCACAGATGGCCTaGTCTCGCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSSQMA*SRPALV
Trigger: CACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGAAGGTGACCCTGTCTaGCCATCCAGCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPEGDPV*PSSTAH
Trigger: GTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTGTGCCATTGCCTTTTaGGACCGCCTTAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGCAIAF*DRLRGQ
Trigger: CTGTCCCCTAAGGCGGTCCCAAAAGGCAATGGCACA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGTGCCATTGCCTTTTaGGACCGCCTTAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCAIAF*DRLRGQ
Trigger: CTGTCCCCTAAGGCGGTCCCAAAAGGCAATGGCACA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACGRRSQ*VPCDST
Trigger: GGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGRRSQ*VPCDST
Trigger: GGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPSLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGATGCTTTTCTCCTCGTaGTGGCCTTCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLMLFSS*WPSLPQ
Trigger: CTGGGGCAGAGAAGGCCACCACGAGGAGAAAAGCAT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEADTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGACACATGTCACCCTaGGGCCCTGACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGHMSP*GPDILK
Trigger: TTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGACACATGTCACCCTaGGGCCCTGACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGHMSP*GPDILK
Trigger: TTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGTGCGGGAGGCGGCCTaGCCTCATGGCCGCAGACCG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPVREAA*PHGRRP
Trigger: CGGTCTGCGGCCATGAGGCCAGGCCGCCTCCCGCAC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGCTGGCCATTGGGGCTaGCCTGGGCTTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACAGHWG*PGLHLG
Trigger: GCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTTCTCAGTCTCCGAGCTaGCCATTGGGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLSQSPS*PLGLAW
Trigger: CCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGA...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCAAGAGCCATGGGGCTaGTGTTTCCATGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLQEPWG*CFHGLP
Trigger: TGGAAGGCCATGGAAACACCAGCCCCATGGCTCTTG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGTGGCTGGGGCCCTCTaGCAAGGTTTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVVAGAL*QGFCQG
Trigger: GCCCTGGCAGAAACCTTGCCAGAGGGCCCCAGCCAC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGGCTTAGGAGGTGGTaGCTGGGGCCCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGLRRW*LGPSGK
Trigger: CTTGCCAGAGGGCCCCAGCCACCACCTCCTAAGCCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCAGTCAAAAGGGACTTaGCTAGGCAGCCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLQSKGT*LGSPTS
Trigger: TGAGGTGGGGCTGCCTAGCCAAGTCCCTTTTGACTG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCAGTCAAAAGGGACTTaGCTAGGCAGCCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLQSKGT*LGSPTS
Trigger: TGAGGTGGGGCTGCCTAGCCAAGTCCCTTTTGACTG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCAAGAGGCGGTTGCCTaGGCCAGGACAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACQEAVA*ARTGQG
Trigger: GCCCTGCCCTGTCCTGGCCCAGGCAACCGCCTCTTG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCAACTCTGCTTGTTTCTaGGCCCACAAAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPNSACF*AHKATV
Trigger: GACAGTGGCTTTGTGGGCTCAGAAACAAGCAGAGTT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVIGPGR*PCLAIQ
Trigger: CTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAAT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCAGTGGGTCCCCTGTaGCAGCACCACCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACPVGPL*QHHPHP
Trigger: AGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCCACACAGGGGACACTaGAGGGTATCAGCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVPHRGH*RVSAGG
Trigger: GCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTGTGGTGCTTCCTTCTaGCCTTGGGCACCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPCGASF*PWAPPS
Trigger: AGACGGAGGTGCCCAAGGTCAGAAGGAAGCACCACA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307564.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGGGCTGGGGGAGCTaGGGAGTCCTGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLGWGS*GVLEFH
Trigger: ATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCCTGGACTCCTGGGTaGGTATCCCCTGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPWTPG*VSPGAA
Trigger: GGCGGCACCAGGGGATACTCACCCAGGAGTCCAGGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCTCAACAGCACCTCCTaGACAATCTCAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLLNSTS*TISAGD
Trigger: GTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCGGCTCAGGCTCTTaGTGGGTCTGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGGSGS*WVWSMC
Trigger: ACACATAGACCAGACCCAGCAAGAGCCTGAGCCGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATCTGCAGCTCCTTGTaGCTGAGTCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVICSSL*LSRARG
Trigger: CCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGAT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCFPWS*SHPINF
Trigger: GAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCCAGGCCTGACATGTaGCCGTCTCTAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPRPDM*PSLARD
Trigger: ATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGEVPL*LAPGCA
Trigger: AGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVKLGAL*RRGPLG
Trigger: CCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACQAEVG*PLPERP
Trigger: GGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCCTGGTCTCGCCCTaGCCTGGTGAGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGLVSP*PGEQEA
Trigger: AGCTTCCTGCTCACCAGGGCAGGGCGAGACCAGGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCACTGCCTCCAGTTCTaGCATCTGGGCTTAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAHCLQF*HLGLGG
Trigger: ACCTCCTAAGCCCAGATGGCAGAACTGGAGGCAGTG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCGGCCATCCTGCCTGTaGCCTCTCTCGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPRPSCL*PLSGST
Trigger: GGTGGAGCCCGAGAGAGGGCACAGGCAGGATGGCCG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCTGCCGCGTTGGCCTaGGCTGGGGATTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPAALA*AGDSGG
Trigger: GCCCCCTGAATCCCCAGCCCAGGCCAACGCGGCAGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGTAGCTCTCATCTTTaGGGAATCTCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGSSHL*GISPGA
Trigger: GGCCCCGGGTGAGATTCCCCAAAGATGAGAGCTACC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGACCCTGGTGATAGGGTaGGCAGGAGGCGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPTLVIG*AGGVSF
Trigger: AAAGGACACGCCTCCTGCCCACCCTATCACCAGGGT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTAAGACCTTGGTCCCCTaGGGCACCATTCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLKTLVP*GTIPVW
Trigger: CCACACGGGAATGGTGCCCCAGGGGACCAAGGTCTT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCAGCCTTCAGCCGCTaGAAGCCCTTGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLAAFSR*KPLTWS
Trigger: GGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAATTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEFQASP*SRQAAG
Trigger: CCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAA...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGCTCTTGCTGGGTCTaGTCTATGTGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGSCWV*SMCSFS
Trigger: GCTGAAGGAACACATAGACCAGACCCAGCAAGAGCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGCCTCTGCTTTCCCTaGAGTTGCAGCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGLCFP*SCSHPI
Trigger: GATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTATACCATCTTCTCCGTaGCCTCCTCCAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLIPSSP*PPPGEP
Trigger: GGGCTCCCCTGGAGGAGGCCACGGAGAAGATGGTAT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTAGCCAGGGATGCCTaGAAACCTGGTGGCTTCATA +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLARDA*KPGGFI
Trigger: TATGAAGCCACCAGGTTTCCAGGCATCCCTGGCTAG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTGGTGCCTGGAGGGTaGGGTGGCACGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPLVPGG*GGTPGP
Trigger: AGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAA...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCCACTGTCTGTCTCTaGGGACGCCATCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLATVCL*GRHPGL
Trigger: GAGACCTGGATGGCGTCCCCAGAGACAGACAGTGGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGATGCAGCAAAGGGCTaGGCTAATGTTCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLDAAKG*ANVPAV
Trigger: CACAGCAGGAACATTAGCCCAGCCCTTTGCTGCATC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGAATCAGAGAACCCCTaGCCTTGGGGTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAESENP*PWGRKL
Trigger: GAGCTTCCTACCCCAAGGCCAGGGGTTCTCTGATTC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCGGGGGCTGGGGGTaGGCTGATTGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGGGWG*ADCLVG
Trigger: CCCAACAAGACAATCAGCCCACCCCCAGCCCCCGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCGGGCTGCCCTGGAGTaGCTGGTGCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRRAALE*LVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGTGGACTGTCCTTGGTaGTCTTGCTCTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPVDCPW*SCSSQR
Trigger: TCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCAC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGAAGGTGACCCTGTCTaGCCATCCAGCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLEGDPV*PSSTAH
Trigger: GTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCCTCTGCTTGGGGCTaGGAGTTGAAGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSSAWG*ELKMLF
Trigger: GAAAAGCATCTTCAACTCCCAGCCCCAAGCAGAGGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGCTTGCTCCTCTGCTTaGGGCTGGGAGTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAACSSA*GWELKM
Trigger: CATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGTCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVSPRSS*MECRCL
Trigger: GAGACACCGGCACTCCATCCAGCTCGACCTGGGCGA...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGTGCGGGAGGCGGCCTaGCCTCATGGCCGCAGACCG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKVREAA*PHGRRP
Trigger: CGGTCTGCGGCCATGAGGCCAGGCCGCCTCCCGCAC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATCTCAGTCTCCGAGCTaGCCATTGGGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPSQSPS*PLGLAW
Trigger: CCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCGGGGCTGGTGGCATTaGGAAAGAGTCTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLRGWWH*ERVSLL
Trigger: AAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGATCGGGCTGCGGGTGTaGGTCCCACTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKIGLRV*VPLQGR
Trigger: CCGCCCCTGGAGTGGGACCCACACCCGCAGCCCGAT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCAGGCAAGAGGCTCATaGGAACTTGCTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPQARGS*ELAGLS
Trigger: GGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGCATGCTGCGGACTCTaGGCTGGGGGAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRACCGL*AGGAEE
Trigger: CTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCAAATACAAGGTGGATaGGGTGGGGAGAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLQIQGG*GGESSG
Trigger: GCCTGAACTCTCCCCACCCCATCCACCTTGTATTTG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGATGGCCTGGCTGGTaGCCCCTGGACTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRRWPGW*PLDSWV
Trigger: CACCCAGGAGTCCAGGGGCCACCAGCCAGGCCATCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCATGTGTTCCTTGGGCTaGGGGCAGAAGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAMCSLG*GQKNLV
Trigger: GACCAGATTCTTCTGCCCTCAGCCCAAGGAACACAT...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPQRTW*GACGSL
Trigger: AAGACTACCACAGGCTCCTCACCAAGTACGCTGAGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGGCAGGTGCGTTGGCTaGTGGAGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDGRCVG*WRQGRA
Trigger: AGCCCTGCCCTGCCTCCATCAGCCAACGCACCTGCC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCAGCTCCTTGTGCCTaGGTCGGGCCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPAAPCA*VGPGGP
Trigger: AGGACCCCCTGGCCCGACTCAGGCACAAGGAGCTGC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCAGCTCCTTGTGCCTaGGTCGGGCCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAAPCA*VGPGGP
Trigger: AGGACCCCCTGGCCCGACTCAGGCACAAGGAGCTGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGCCTTGCCCAGGCCTaGCATGTGCCCGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRSLAQA*HVPVSS
Trigger: GCTAGAGACGGGCACATGTCAGGCCTGGGCAAGGCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTCAGTCATGTCCAGCTaGCGGCCCTGCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPSVMSS*RPCWGS
Trigger: GCTCCCCCAGCAGGGCCGTCAGCTGGACATGACTGA...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGCAAGAGAATCACTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGKRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGTGATTCTCTTGCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGAGGGAAGGGCTGGGGTaGTGCAGAGGGCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPREGLG*CRGLGA
Trigger: GGCCCCAAGCCCTCTGCATCACCCCAGCCCTTCCCT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGTGACGTCTTTGTCTaGTTCCAGATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGDVFV*FQMCSL
Trigger: CAAGGAACACATCTGGAAGCAGACAAAGACGTCACC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCTCAACAGCACCTCCTaGACAATCTCAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEALNSTS*TISAGD
Trigger: GTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGGCTGCTTCTCCACTaGTCAACAGCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGLLLH*STAPPA
Trigger: TGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPVLCQG*FSTAQQ
Trigger: CTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGAC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGCATGAGACGTCCTaGCTGTATCAGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGHETS*LYQSFK
Trigger: TTTGAAAGACTGATACAGGCAGGACGTCTCATGCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCTGCCTCCAGCTCCCTaGGAGGATCAAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLPPAP*EDQIFQ
Trigger: CTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCCCAGGCCTGACATGTaGCCGTCTCTAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVPRPDM*PSLARD
Trigger: ATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGGCTGCCTCAGCCTTaGCCAGGCCTGACATGTGCC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGLPQP*PGLTCA
Trigger: GGCACATGTCAGGCCTGGGCAAGGCTGAGGCAGCCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCAGAAATCCGTTTGTaGCCCTCAAACTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSEIRL*PSNSEP
Trigger: TGGCTCAGAGTTTGAGGGGCACAAACGGATTTCTGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGAAGACCTGGCTCGCTaGCTTCCTGGAGGGACAATC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLEDLAR*LPGGTI
Trigger: GATTGTCCCTCCAGGAAGGCAGCGAGCCAGGTCTTC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGGCCATCCAGCACTaGCCACCCCTCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLAIQH*PPLSFH
Trigger: ATGGAAAGAGAGGGGTGGGCAGTGCTGGATGGCCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGGGACAGGAGACTGTaGCATTGCCTTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGDRRL*HCLLGP
Trigger: CGGTCCCAAAAGGCAATGGCACAGTCTCCTGTCCCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGCCTGCTTGCTCCTCTaGTTGGGGCTGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIACLLL*LGLGVE
Trigger: TTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCAGGC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGTGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPRNAEV*CCHGVG
Trigger: CCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTACTGCTCCAGGACCTTaGCGGGCTGAGTTCAACGGA +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLTAPGP*RAEFNG
Trigger: TCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTTGCCCGAGCAACACTaGCTCCAGTTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLPEQH*LQFCHL
Trigger: CAGATGGCAGAACTGGAGGCAGTGTTGCTCGGGCAA...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGAATTCCATGGGGGTTaGCCGAGCAACACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLEFHGG*PSNTAS
Trigger: GGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCATCTATCTGTGGCATaGTGCGGACTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPHLSVA*CGLWAG
Trigger: CCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCCCCCTGTCTCCATTaGGCCCTGGCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAPCLH*ALAHLQ
Trigger: CTGGAGGTGGGCCAGGGCGCAATGGAGACAGGGGGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGTAGCTCTCATCTTTaGGGAATCTCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGSSHL*GISPGA
Trigger: GGCCCCGGGTGAGATTCCCCAAAGATGAGAGCTACC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGCGTAGCTGGTCAATaGTGTTCTCGGCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGVAGQ*CSRPQR
Trigger: ACGCTGAGGCCGAGAACACCATTGACCAGCTACGCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCACCATTCCCGTGTaGATGCTGTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGTIPV*MLWLGW
Trigger: CCAGCCCAACCACAGCATCCACACGGGAATGGTGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAAGACCTTGGTCCCCTaGGGCACCATTCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPKTLVP*GTIPVW
Trigger: CCACACGGGAATGGTGCCCCAGGGGACCAAGGTCTT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATGGCCAGGAACTGGCTaGCCTGAGAAGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPWPGTG*PEKPVP
Trigger: AGGCACTGGCTTCTCAGGCCAGCCAGTTCCTGGCCA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCAGCCTTCAGCCGCTaGAAGCCCTTGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPAAFSR*KPLTWS
Trigger: GGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDSSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACACATTTACGTGCAATaGGCAGGGGCCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLHIYVQ*AGASAG
Trigger: GCCAGCACTGGCCCCTGCCCATTGCACGTAAATGTG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTGCGGACTTGGTGCCTaGAGGGTGGGGTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDCGLGA*RVGWHA
Trigger: GGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGTCATACTACTTTGGTaGGATGCTGCGGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLVILLW*DAADLV
Trigger: CACCAAGTCCGCAGCATCCCACCAAAGTAGTATGAC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGTCATACTACTTTaGTGGGATGCTGCGGACTTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLVILL*WDAADL
Trigger: CAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCCTGCTGTGCTGATGTaGGAGAGCCGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVPAVLM*ESRCSG
Trigger: TCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACCTGCTGTGCTGATGTaGGAGAGCCGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPPAVLM*ESRCSG
Trigger: TCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGCGGGGGCTGGGGGTaGGCTGATTGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGGGWG*ADCLVG
Trigger: CCCAACAAGACAATCAGCCCACCCCCAGCCCCCGCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGCTCGCTGCCTTCCTaGAGGGACAATCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGSLPS*RDNLLF
Trigger: GAAGAGCAGATTGTCCCTCCAGGAAGGCAGCGAGCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGATCCCGAGCTGCCTGTaGACTGTCCTTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPIPSCL*TVLGGL
Trigger: AAGACCACCAAGGACAGTCCACAGGCAGCTCGGGAT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATGGACCATCTGCCTCTaGGGGAGACCCAACTTGACC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLWTICL*GRPNLT
Trigger: GGTCAAGTTGGGTCTCCCCCAGAGGCAGATGGTCCA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGTACACAGCGGCAGGTaGATAAGGCATGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAVHSGR*IRHDGN
Trigger: GTTCCCATCATGCCTTATCCACCTGCCGCTGTGTAC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCAGGTCGAGCTGGATaGAGTGCCGGTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPGRAG*SAGVSG
Trigger: CCCGGAGACACCGGCACTCCATCCAGCTCGACCTGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGGTGGATGGCATCCTaGGCACTTTGTAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLWWMAS*ALCSLS
Trigger: AGACAAGCTACAAAGTGCCCAGGATGCCATCCACCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGGGACCATGGTGGATaGCATCCTGGGCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGDHGG*HPGHFV
Trigger: TACAAAGTGCCCAGGATGCCATCCACCATGGTCCCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCACTGATAAACGCCACTaGGATCCTAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGTDKRH*DPRRSW
Trigger: CCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCATTGGGGCTGGCCTaGGCTTCACCTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACPLGLA*ASPGPL
Trigger: AAGTGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCTGGCCATTGGGGCTaGCCTGGGCTTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAGHWG*PGLHLG
Trigger: GCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTAGGAGCTCGGGGCTaGTGGCATTGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLGARG*WHWERV
Trigger: GACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTCATGGGAACTTGCTaGGCTGTCCACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLMGTC*AVHILC
Trigger: GCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCAAGAGCCATGGGGCTaGTGTTTCCATGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPQEPWG*CFHGLP
Trigger: TGGAAGGCCATGGAAACACCAGCCCCATGGCTCTTG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACATGCCCAAGAGCCATaGGGCTGGTGTTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIHAQEP*GWCFHG
Trigger: GCCATGGAAACACCAGCCCCATGGCTCTTGGGCATG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGCTGAGTTCAACGGATaGGTTGACCTCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGAEFNG*VDLGMF
Trigger: GAACATTCCGAGGTCAACCCATCCGTTGAACTCAGC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAAGTACTGGAAGGCTaGGCGCCATGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLKVLEG*APWLTP
Trigger: AGGCGTGAGCCATGGCGCCCAGCCTTCCAGTACTTT...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCAGGTGCTCCCTAAATaGCAGGTGCTGTTTGCTACT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGQVLPK*QVLFAT
Trigger: AGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAAGAGGCGGTTGCCTaGGCCAGGACAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQEAVA*ARTGQG
Trigger: GCCCTGCCCTGTCCTGGCCCAGGCAACCGCCTCTTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGATGTGTTCCTTGGGCTaGGGGCAGAAGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPMCSLG*GQKNLV
Trigger: GACCAGATTCTTCTGCCCTCAGCCCAAGGAACACAT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGCCTTGCCCAGGCCTaGCATGTGCCCGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESLAQA*HVPVSS
Trigger: GCTAGAGACGGGCACATGTCAGGCCTGGGCAAGGCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEIGPGR*PCLAIQ
Trigger: CTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAAT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCAGTGGGTCCCCTGTaGCAGCACCACCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPVGPL*QHHPHP
Trigger: AGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCAGGTGGATAAGGCATaGTGGGAACCGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPQVDKA*WEPRRC
Trigger: ACATCTCCTCGGTTCCCATCATGCCTTATCCACCTG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACTCATACCCCAACCTTaGGGAGCTCTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPLIPQP*GALSSL
Trigger: GAGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTCATACCCCAACCTTaGGGAGCTCTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLIPQP*GALSSL
Trigger: GAGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGTCTGGGCAGCGGCCTaGCCTGCCGCGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPVWAAA*PAALAW
Trigger: CCAGGCCAACGCGGCAGGGCAGGCCGCTGCCCAGAC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTCAACAGCACCTCCTaGACAATCTCAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLNSTS*TISAGD
Trigger: GTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIVLCQG*FSTAQQ
Trigger: CTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGAC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVRRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGGCATGAGACGTCCTaGCTGTATCAGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGHETS*LYQSFK
Trigger: TTTGAAAGACTGATACAGGCAGGACGTCTCATGCCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGCCTCCAGCTCCCTaGGAGGATCAAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLPPAP*EDQIFQ
Trigger: CTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPITSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAATCTGCAGCTCCTTGTaGCTGAGTCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEICSSL*LSRARG
Trigger: CCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGAT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACTACTTTGGTGGGATaGTGCGGACTTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPTTLVG*CGLGAW
Trigger: CCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGPPPR*KGFCGR
Trigger: CCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACTTGGCTCCGGGGTGTaGTGGGCTCTGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIELGSGV*WALWLF
Trigger: GAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACGEVPL*LAPGCA
Trigger: AGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQAEVG*PLPERP
Trigger: GGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPQAEVG*PLPERP
Trigger: GGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGGCGACGACCCCGCCTaGTTGCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKGDDPA*LLLCLG
Trigger: CCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTCGCC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPILELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGGAAAGGCCTCTGCTaGCATAGAAAAGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGKGLC*HRKAGH
Trigger: GTGTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAEVCC*HGVGVR
Trigger: CCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRNAEV*CCHGVG
Trigger: CCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTTGCCCGAGCAACACTaGCTCCAGTTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLPEQH*LQFCHL
Trigger: CAGATGGCAGAACTGGAGGCAGTGTTGCTCGGGCAA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCAGCAACTTGCTGTGTaGCTCATTTACATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGQQLAV*LIYISG
Trigger: GCCAGAGATGTAAATGAGGCACACAGCAAGTTGCTG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAGCATCGGCCATCCTaGCTGTGCCCTCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQHRPS*LCPLSG
Trigger: GCCCGAGAGAGGGCACAGGCAGGATGGCCGATGCTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGTAGCTCTCATCTTTaGGGAATCTCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGSSHL*GISPGA
Trigger: GGCCCCGGGTGAGATTCCCCAAAGATGAGAGCTACC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCTGCACAATCTCAGCTaGAGACTTGAAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEALHNLS*RLEDEG
Trigger: CCCCTCATCTTCAAGTCTCCAGCTGAGATTGTGCAG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCACCATTCCCGTGTaGATGCTGTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGTIPV*MLWLGW
Trigger: CCAGCCCAACCACAGCATCCACACGGGAATGGTGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATGGAAGCCCTTGACTTaGTCCTGGGGCATGAGACGT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLWKPLT*SWGMRR
Trigger: ACGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCTCTTGCTGGGTCTaGTCTATGTGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGSCWV*SMCSFS
Trigger: GCTGAAGGAACACATAGACCAGACCCAGCAAGAGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCAGCAGGCAGGTGCGTTaGCTGATGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPSRQVR*LMEAGQ
Trigger: CTGCCCTGCCTCCATCAGCCAACGCACCTGCCTGCT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCTGCCTGGAAACCTGGTaGCTTCATAGATACCATCTT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPCLETW*LHRYHL
Trigger: AAGATGGTATCTATGAAGCCACCAGGTTTCCAGGCA...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDGMLRT*CLEGGV
Trigger: CACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGTCATACTACTTTGGTaGGATGCTGCGGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAVILLW*DAADLV
Trigger: CACCAAGTCCGCAGCATCCCACCAAAGTAGTATGAC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCCTGCTGTGCTGATGTaGGAGAGCCGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRPAVLM*ESRCSG
Trigger: TCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGAAGCTCCATCCCTaGGCACAGATGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRKLHP*AQMQQR
Trigger: CCTTTGCTGCATCTGTGCCCAGGGATGGAGCTTCCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCAGGTACCTCTGTGCTTaGCTCCGGGGTGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPRYLCA*LRGVLG
Trigger: GCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPERPT*AGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGCTCACAGATGGCCTaGTCTCGCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESSQMA*SRPALV
Trigger: CACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACTTGCAGCTCACAGATaGCCTGGTCTCGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIELAAHR*PGLALP
Trigger: GGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCGGGCTGCCCTGGAGTaGCTGGTGCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKRAALE*LVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTGTGCCATTGCCTTTTaGGACCGCCTTAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPCAIAF*DRLRGQ
Trigger: CTGTCCCCTAAGGCGGTCCCAAAAGGCAATGGCACA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEDVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGTACACAGCGGCAGGTaGATAAGGCATGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPVHSGR*IRHDGN
Trigger: GTTCCCATCATGCCTTATCCACCTGCCGCTGTGTAC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGTACACAGCGGCAGGTaGATAAGGCATGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPVHSGR*IRHDGN
Trigger: GTTCCCATCATGCCTTATCCACCTGCCGCTGTGTAC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCAGGTCGAGCTGGATaGAGTGCCGGTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPGRAG*SAGVSG
Trigger: CCCGGAGACACCGGCACTCCATCCAGCTCGACCTGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAATCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESPRSS*MECRCL
Trigger: GAGACACCGGCACTCCATCCAGCTCGACCTGGGCGA...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGGCTGGTGTTTCCATaGCCTTCCAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGLVFP*PSKLRP
Trigger: TGGTCTCAGCTTGGAAGGCCATGGAAACACCAGCCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPRLSLG*SRLTVP
Trigger: TGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGAGCTGAGGAGTCCTaGAATTCCATGGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGAEES*NSMGVA
Trigger: GGCAACCCCCATGGAATTCCAGGACTCCTCAGCTCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTCCTCCATCTATCTGTaGCATGCTGCGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSSIYL*HAADSG
Trigger: CCCAGAGTCCGCAGCATGCCACAGATAGATGGAGGA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTACCAGTTTGGGCAGATaGCCCATTGGAACCCCACTC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLTSLGR*PIGTPL
Trigger: GAGTGGGGTTCCAATGGGCCATCTGCCCAAACTGGT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGCTCACAGATGGCCTaGCTGGTGGCCCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESSQMA*LVAPGL
Trigger: GAGTCCAGGGGCCACCAGCCAGGCCATCTGTGAGCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374079.8
3UTR CAA 72 bp TGTGAGGGGACTGGTGCTCCTGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCCCCTCCACTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CEGTGAPGKSLL*VTELTPPPLGK
Trigger: CTTTCCAAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CAA 72 bp CAGGCAGAGCACCCAACAGGTCCCCTGGGAAAGGGCTaGGCTGGGCATCAAACCTACCACCCCATAAACTTG +
Preference number: 4 (lower is better)
Translates to: QAEHPTGPLGKG*AGHQTYHPINL
Trigger: CAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGGGTGCTCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTATGTGTTCCTTGGGCTaGGGGCAGAAGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLMCSLG*GQKNLV
Trigger: GACCAGATTCTTCTGCCCTCAGCCCAAGGAACACAT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCTGGGTCTGCTCTGCTaGGGACTGGTCCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRLGLLC*GLVLRD
Trigger: ATCTCTGAGGACCAGTCCTCAGCAGAGCAGACCCAG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCCACACAGGGGACACTaGAGGGTATCAGCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDPHRGH*RVSAGG
Trigger: GCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCTGGGCTGGGGGAGCTaGGGAGTCCTGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPLGWGS*GVLEFH
Trigger: ATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVTSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPTSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLCFPWS*SHPINF
Trigger: GAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCCAGGCCTGACATGTaGCCGTCTCTAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPRPDM*PSLARD
Trigger: ATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPEGAQR*RFPPGW
Trigger: CCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDEGAQR*RFPPGW
Trigger: CCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKGPPPR*KGFCGR
Trigger: CCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTTGGCTCCGGGGTGTaGTGGGCTCTGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLGSGV*WALWLF
Trigger: GAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEACPWWS*SSQRTV
Trigger: CACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGAAAGGCCTCTGCTaGCATAGAAAAGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGKGLC*HRKAGH
Trigger: GTGTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACNAEVC*CHGVGV
Trigger: CACCCCTACCCCGTGGCAGCAGCATACCTCTGCATT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGCTGTCCACATCCTCTaGTTCAGCCTCTGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPAVHIL*FSLWKD
Trigger: GTCTTTCCAGAGGCTGAAGCAGAGGATGTGGACAGC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374075.9
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRRTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTGCAGAGCGGGGCTGTaGGATGGTGAAGGACAAGAC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACCRAGL*DGEGQD
Trigger: GTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCAAAGGACTCCACCTTaGCCAGGAACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACQRTPP*PGTGWP
Trigger: AGGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGTGGAAGCCCTTGACTTaGTCCTGGGGCATGAGACGT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVWKPLT*SWGMRR
Trigger: ACGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCA...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCATTCTCATGGCTTCTaGGAGAGACTTCACACTGAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAHSHGF*ERLHTE
Trigger: CTCAGTGTGAAGTCTCTCCCAGAAGCCATGAGAATG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGCCTCTGCTTTCCCTaGAGTTGCAGCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGLCFP*SCSHPI
Trigger: GATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAATACCATCTTCTCCGTaGCCTCCTCCAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEIPSSP*PPPGEP
Trigger: GGGCTCCCCTGGAGGAGGCCACGGAGAAGATGGTAT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTGGTCATACTACTTTaGTGGGATGCTGCGGACTTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLVILL*WDAADL
Trigger: CAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCGCTTCCCTCCAGGCTaGTCATACTACTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVRFPPG*SYYFGG
Trigger: CCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGCTCTGTGGCTCTTCTaGGAATCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVALWLF*ESENPW
Trigger: CCAGGGGTTCTCTGATTCCCAGAAGAGCCACAGAGC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPERPT*AGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTTGCAGCTCACAGATaGCCTGGTCTCGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLAAHR*PGLALP
Trigger: GGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGTGGACTGTCCTTGGTaGTCTTGCTCTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPVDCPW*SCSSQR
Trigger: TCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCAC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTTTAGGGGACAGAACATaGTATTCGTGGCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLGDRT*YSWPVY
Trigger: ATACACAGGCCACGAATACCATGTTCTGTCCCCTAA...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTCCTCTGCTTGGGGCTaGGAGTTGAAGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPSSAWG*ELKMLF
Trigger: GAAAAGCATCTTCAACTCCCAGCCCCAAGCAGAGGA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDSPRSS*MECRCL
Trigger: GAGACACCGGCACTCCATCCAGCTCGACCTGGGCGA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGTCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPSPRSS*MECRCL
Trigger: GAGACACCGGCACTCCATCCAGCTCGACCTGGGCGA...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGACACATGTCACCCTaGGGCCCTGACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGHMSP*GPDILK
Trigger: TTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCATTGGGGCTGGCCTaGGCTTCACCTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPLGLA*ASPGPL
Trigger: AAGTGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGAGCTCGGGGCTGGTaGCATTGGGAAAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGARGW*HWERVS
Trigger: AGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGGCTGGTGTTTCCATaGCCTTCCAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGLVFP*PSKLRP
Trigger: TGGTCTCAGCTTGGAAGGCCATGGAAACACCAGCCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGGAAAGGGCTTGGCTaGGCATCAAACCTACCACCC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGKGLG*ASNLPP
Trigger: GGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAACCAGTTTGGGCAGATaGCCCATTGGAACCCCACTC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPTSLGR*PIGTPL
Trigger: GAGTGGGGTTCCAATGGGCCATCTGCCCAAACTGGT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAGGGAGTGGCTTAGGTaGCGTCTTTGTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPREWLR*RLCLLP
Trigger: TGGAAGCAGACAAAGACGTCACCTAAGCCACTCCCT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGCTTGCTCAGGCGTCTaGAATTCTTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACACSGV*NSWGTL
Trigger: CAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCTTGGTCCTGGGGCATaGGACGTCCTGCCTGTATCA +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPLGPGA*DVLPVS
Trigger: TGATACAGGCAGGACGTCTCATGCCCCAGGACCAAG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCTCTGGAGTCTGGGTaGGGGGTGAAACTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEALESG*GVKLCL
Trigger: CAAGCAGAGTTTCACCCCTCACCCAGACTCCAGAGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTTGGGGCTGGGAGTTaGAGATGCTTTTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLGAGS*RCFSPR
Trigger: ACGAGGAGAAAAGCATCTTCAACTCCCAGCCCCAAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCAGGTGGATAAGGCATaGTGGGAACCGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVQVDKA*WEPRRC
Trigger: ACATCTCCTCGGTTCCCATCATGCCTTATCCACCTG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACAGGGTGATAGGACCATaGGCCCGAGGCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDRVIGP*ARGPDV
Trigger: GACATCAGGGCCTCGGGCTCATGGTCCTATCACCCT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCGCCCCTGCCGTGGTTaGGGCCGCCTCGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFRPCRG*GRLASA
Trigger: TGCCGAGGCGAGGCGGCCTCAACCACGGCAGGGGCG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIERRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGCGGCTCAGGCTCTTaGTGGGTCTGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGGSGS*WVWSMC
Trigger: ACACATAGACCAGACCCAGCAAGAGCCTGAGCCGCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGCGGCTCAGGCTCTTaGTGGGTCTGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGGSGS*WVWSMC
Trigger: ACACATAGACCAGACCCAGCAAGAGCCTGAGCCGCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAATCTGCAGCTCCTTGTaGCTGAGTCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKICSSL*LSRARG
Trigger: CCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGAT...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGACCCTGGTGGCCTCTaGTTTCCCTGGAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDDPGGL*FPWSCS
Trigger: GCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCCAGGCCTGACATGTaGCCGTCTCTAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPRPDM*PSLARD
Trigger: ATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPCPWWS*SSQRTV
Trigger: CACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCTTTCCATCCCGAGCTaGCTGTGGACTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACLSIPS*LWTVLG
Trigger: ACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLTLSAA*TARLRA
Trigger: GGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIERTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCACACATTCCAGAAATaGAGAGGTATGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPHTFQK*RGMLLP
Trigger: TGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACGGCCATCCTGCCTGTaGCCTCTGTGTGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKRPSCL*PLCGAS
Trigger: GGAAGCACCACACAGAGGGCACAGGCAGGATGGCCG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307564.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGCACAATCTCAGCTaGAGACTTGAAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLHNLS*RLEDEG
Trigger: CCCCTCATCTTCAAGTCTCCAGCTGAGATTGTGCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKAPRRS*SMVFSA
Trigger: GGCCGAGAACACCATTGACCAGCTACGCCTCGGGGC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIERTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGTGGCCAGGAACTGGCTaGCCTGAGAAGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKWPGTG*PEKPVP
Trigger: AGGCACTGGCTTCTCAGGCCAGCCAGTTCCTGGCCA...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCTCAGGCTCTTGCTaGGTCTGGTCTATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGSGSC*VWSMCS
Trigger: GGAACACATAGACCAGACCCAGCAAGAGCCTGAGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCTCCTCCATTCTCATaGCTTCTGGGAGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPPPFS*LLGETS
Trigger: TGAAGTCTCTCCCAGAAGCCATGAGAATGGAGGAGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTAGCCAGGGATGCCTaGAAACCTGGTGGCTTCATA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLARDA*KPGGFI
Trigger: TATGAAGCCACCAGGTTTCCAGGCATCCCTGGCTAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGGTCATACTACTTTaGTGGGATGCTGCGGACTTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLVILL*WDAADL
Trigger: CAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCAGGCAATCTCTCTGTaGATTTACTGCCATAATGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAQAISL*IYCHNG
Trigger: CCCATTATGGCAGTAAATCCACAGAGAGATTGCCTG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAA