RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKNA (Homo sapiens)

Ensembl gene IDs: ENSG00000106948

Ensembl transcript IDs: ENST00000223791.7, ENST00000307564.8, ENST00000312033.3, ENST00000374075.9, ENST00000374079.8, ENST00000374088.8, ENST00000490767.1, ENST00000491133.1, ENST00000492875.1

Found 1610 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTCATGGCCGCAGACCGTGCCCCAGCCCGGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACTGGGATCCTAGGAGAAGCTGGGGAC +
Preference number: 1 (lower is better)
Translates to: PHGRRPCPSPGLAGS*PLINATGILGEAGD
Trigger: GTCCCCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp CTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGG +
Preference number: 1 (lower is better)
Translates to: LELHTCRTRRDCLRF*LDRRRPRSQHLCEG
Trigger: CCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp GAGGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGA +
Preference number: 1 (lower is better)
Translates to: EVLPGPKEASLTAPL*GDWCSWEVTSLGDR
Trigger: TCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp ACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGC +
Preference number: 1 (lower is better)
Translates to: TSLMHTHSRNAEVCC*HGVGVREAAWPHGR
Trigger: GCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp CGCCACTGGGATCCTAGGAGAAGCTGGGGACCATGCGTGAGGTACTaGAGGGGACCATGGTGGATGGCATCCTGGGCACTTTGTAGCTTG +
Preference number: 1 (lower is better)
Translates to: RHWDPRRSWGPCVRY*RGPWWMASWALCSL
Trigger: CAAGCTACAAAGTGCCCAGGATGCCATCCACCATGGTCCCCTTCAGTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATCCCAGTGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp CAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGC +
Preference number: 1 (lower is better)
Translates to: QTSLMHTHSRNAEVC*CHGVGVREAAWPHG
Trigger: GCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp ATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCT +
Preference number: 1 (lower is better)
Translates to: IISWSCTHAGPGETA*GSAWTEGGLAHSTS
Trigger: AGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp CTGATAAACGCCACTGGGATCCTAGGAGAAGCTGGGGACCATGCGTaGGGTACTGAAGGGGACCATGGTGGATGGCATCCTGGGCACTTT +
Preference number: 1 (lower is better)
Translates to: LINATGILGEAGDHA*GTEGDHGGWHPGHF
Trigger: AAAGTGCCCAGGATGCCATCCACCATGGTCCCCTTCAGTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp ATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCAT +
Preference number: 1 (lower is better)
Translates to: IQTSLMHTHSRNAEV*CCHGVGVREAAWPH
Trigger: ATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 90 bp TTAGCACCGGAATCAGGGTCTAGCAGGTGCTCCCTAAATGGCAGGTaGTGTTTGCTACTGAAAGTACTGGAAGGCTGGGCGCCATGGCTC +
Preference number: 1 (lower is better)
Translates to: LAPESGSSRCSLNGR*CLLLKVLEGWAPWL
Trigger: GAGCCATGGCGCCCAGCCTTCCAGTACTTTCAGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTGCTAGACCCTGATTCCGGTGCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR GCA 90 bp TGCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATaGAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGC +
Preference number: 1 (lower is better)
Translates to: CLKYTNIIDAHTFQK*RGMLLPRGRGAGGG
Trigger: GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 90 bp ACCCAAAATCATTTCAAGGGCTATCAGTGGTATACATTCCACACTTaGAGAGGCAGGACAGGTAAGCCATGTCTAAACTGTGAAGCGCTG +
Preference number: 1 (lower is better)
Translates to: TQNHFKGYQWYTFHT*RGRTGKPCLNCEAL
Trigger: CAGCGCTTCACAGTTTAGACATGGCTTACCTGTCCTGCCTCTTCAAGTGTGGAATGTATACCACTGATAGCCCTTGAAATGATTTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
3UTR-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 2 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGACTGATAAACGCCACTaGGATCCTAGGAGAAGCTGG +
Preference number: 2 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQTDKRH*DPRRSW
Trigger: CCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: LPVTRRKVSGYALPSDACAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 2 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CAA 90 bp CAGCACCTCTGTGAGGGGACTGGTGCTCCTGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCCCCTCCACTTGGAAAGCACAGGGAC +
Preference number: 2 (lower is better)
Translates to: QHLCEGTGAPGKSLL*VTELTPPPLGKHRD
Trigger: GTCCCTGTGCTTTCCAAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCCTCACAGAGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LPVTRRKVSGYALPSDACRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 2 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: ASWALCSLSEGKASAAIERRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: LPVTRRKVSGYALPSDACPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: PDILKCPTDYQSLGERSPSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 2 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CAA 90 bp AGAGGGAGGCAGGCAGAGCACCCAACAGGTCCCCTGGGAAAGGGCTaGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAG +
Preference number: 2 (lower is better)
Translates to: RGRQAEHPTGPLGKG*AGHQTYHPINLTLK
Trigger: CTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGGGTGCTCTGCCTGCCTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: ASWALCSLSEGKASAAIEMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 2 (lower is better)
Translates to: LPVTRRKVSGYALPSDACRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 2 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: SWALCSLSEGKASAAIEKDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 2 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 2 (lower is better)
Translates to: SWALCSLSEGKASAAIEKIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CAA 90 bp AAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATaGAAGGCAAAAGTTAATGACATACAGCAGAGACACGGATGGCTT +
Preference number: 2 (lower is better)
Translates to: KGLAGHQTYHPINLT*KAKVNDIQQRHGWL
Trigger: AAGCCATCCGTGTCTCTGCTGTATGTCATTAACTTTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 2 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 2 (lower is better)
Translates to: PDILKCPTDYQSLGERSPIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 2 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 2 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGGGACCATGGTGGATaGCATCCTGGGCACTTTGTA +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGDHGG*HPGHFV
Trigger: TACAAAGTGCCCAGGATGCCATCCACCATGGTCCCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 2 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR TCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTTATACATTCCACACTTaGAGAGGCAGGACAGGTAAG +
Preference number: 2 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTYTFHT*RGRTGK
Trigger: CTTACCTGTCCTGCCTCTTCAAGTGTGGAATGTATA...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
3UTR-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 2 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp GCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: AGGTCAGGRPSW*GTMRAFWASAA
Trigger: AGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTGGGCACTTTGTAGCTaGTCTGAGGGAAAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQWALCS*SEGKAS
Trigger: AGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CCA 72 bp CGCAGACCGTGCCCCAGCCCGGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACTGGGATCCTAGGAGAA +
Preference number: 3 (lower is better)
Translates to: RRPCPSPGLAGS*PLINATGILGE
Trigger: TTCTCCTAGGATCCCAGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCCCGGGCTGGGGCACGGTCTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp CACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCTCGCTCACAGCACCTC +
Preference number: 3 (lower is better)
Translates to: HTCRTRRDCLRF*LDRRRPRSQHL
Trigger: GAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp ATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: MHTHSRNAEVCC*HGVGVREAAWP
Trigger: AGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp CCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGGGAAGTCACTTCTCTT +
Preference number: 3 (lower is better)
Translates to: PGPKEASLTAPL*GDWCSWEVTSL
Trigger: AAGAGAAGTGACTTCCCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp TGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAAGGAGGCCTCGCTCAC +
Preference number: 3 (lower is better)
Translates to: WSCTHAGPGETA*GSAWTEGGLAH
Trigger: GTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp CCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGACAGGTTTGCTCCAGA +
Preference number: 3 (lower is better)
Translates to: PAMPFPVMLAPE*LVTGGGQVCSR
Trigger: TCTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp TTGATGCACACACATTCCAGAAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGG +
Preference number: 3 (lower is better)
Translates to: LMHTHSRNAEVC*CHGVGVREAAW
Trigger: CCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp GCCACTGGGATCCTAGGAGAAGCTGGGGACCATGCGTaGGGTACTGAAGGGGACCATGGTGGATGGCATCCT +
Preference number: 3 (lower is better)
Translates to: ATGILGEAGDHA*GTEGDHGGWHP
Trigger: AGGATGCCATCCACCATGGTCCCCTTCAGTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATCCCAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp TCATTGATGCACACACATTCCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCC +
Preference number: 3 (lower is better)
Translates to: SLMHTHSRNAEV*CCHGVGVREAA
Trigger: GGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 3 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAACCGTAGGCCTTTCTaGTCTGGCCCCCTAAAGAGG +
Preference number: 3 (lower is better)
Translates to: PVTRRKVSGYALPSDACPNRRPF*SGPLKR
Trigger: CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp GATCCTAGGAGAAGCTGGGGACCATGCGTGAGGTACTaGAGGGGACCATGGTGGATGGCATCCTGGGCACTT +
Preference number: 3 (lower is better)
Translates to: DPRRSWGPCVRY*RGPWWMASWAL
Trigger: AAGTGCCCAGGATGCCATCCACCATGGTCCCCTTCAGTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 3 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR TCA 72 bp AGAGTGAGGGTCCTGAGGGTTAGCACATGGACTGTGTaGAGCAGACAATGCCCAGTGCTTAGCACCGGAATC +
Preference number: 3 (lower is better)
Translates to: RVRVLRVSTWTV*SRQCPVLSTGI
Trigger: GATTCCGGTGCTAAGCACTGGGCATTGTCTGCTTCACACAGTCCATGTGCTAACCCTCAGGACCCTCACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR GCA 72 bp GGACACATGTCACCCTGGGGCCCTGACATCCTAAAATaGCCCACTGACTACCAGTCACTAGGAGAAAGGTCT +
Preference number: 3 (lower is better)
Translates to: GHMSPWGPDILK*PTDYQSLGERS
Trigger: AGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp GAATCAGGGTCTAGCAGGTGCTCCCTAAATGGCAGGTaGTGTTTGCTACTGAAAGTACTGGAAGGCTGGGCG +
Preference number: 3 (lower is better)
Translates to: ESGSSRCSLNGR*CLLLKVLEGWA
Trigger: CGCCCAGCCTTCCAGTACTTTCAGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTGCTAGACCCTGATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR GCA 72 bp GCCCAGTGCTTAGCACCGGAATCAGGGTCTAGCAGGTaGTCCCTAAATGGCAGGTGCTGTTTGCTACTGAAA +
Preference number: 3 (lower is better)
Translates to: AQCLAPESGSSR*SLNGRCCLLLK
Trigger: TTTCAGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTGCTAGACCCTGATTCCGGTGCTAAGCACTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 3 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp TATACAAACATCATTGATGCACACACATTCCAGAAATaGAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCG +
Preference number: 3 (lower is better)
Translates to: YTNIIDAHTFQK*RGMLLPRGRGA
Trigger: CGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR GCA 72 bp CCAGGTGCATACTCTTGTAGACAGCAACTTGCTGTGTaGCTCATTTACATCTCTGGCCTCAGTCAAAAGGGA +
Preference number: 3 (lower is better)
Translates to: PGAYSCRQQLAV*LIYISGLSQKG
Trigger: TCCCTTTTGACTGAGGCCAGAGATGTAAATGAGGCACACAGCAAGTTGCTGTCTACAAGAGTATGCACCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
3UTR TCA 72 bp CATTTCAAGGGCTATCAGTGGTATACATTCCACACTTaGAGAGGCAGGACAGGTAAGCCATGTCTAAACTGT +
Preference number: 3 (lower is better)
Translates to: HFKGYQWYTFHT*RGRTGKPCLNC
Trigger: ACAGTTTAGACATGGCTTACCTGTCCTGCCTCTTCAAGTGTGGAATGTATACCACTGATAGCCCTTGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000312033.3
3UTR CCA 72 bp ATCTGTCCATCTGTATATAAAATACCTATTATTAGCTaGAGTTGCACACATGCAGGACCAGGAGAGACTGCC +
Preference number: 3 (lower is better)
Translates to: ICPSVYKIPIIS*SCTHAGPGETA
Trigger: GGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATACAGATGGACAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCAGGTCTCCTCCAGGTaGGGCCCACCGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQQVSSR*GPPPRC
Trigger: GCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQSSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTGCGGACTTGGTGCCTaGAGGGTGGGGTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQCGLGA*RVGWHA
Trigger: GGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGCCTGGTCTCGCCCTaGCCTGGTGAGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGLVSP*PGEQEA
Trigger: AGCTTCCTGCTCACCAGGGCAGGGCGAGACCAGGCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCCACACAGGGGACACTaGAGGGTATCAGCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQPHRGH*RVSAGG
Trigger: GCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQEGAQR*RFPPGW
Trigger: CCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQAPRRS*SMVFSA
Trigger: GGCCGAGAACACCATTGACCAGCTACGCCTCGGGGC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGGGCGGCAGGTGCTaGTGGGCCAGGCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRGGRC*WARRKS
Trigger: GGACTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTGCCGCGTTGGCCTaGGCTGGGGATTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPAALA*AGDSGG
Trigger: GCCCCCTGAATCCCCAGCCCAGGCCAACGCGGCAGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGCAGCCTTCAGCCGCTaGAAGCCCTTGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQAAFSR*KPLTWS
Trigger: GGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGACTTTGGTGGGATGCTaGGGACTTGGTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQTLVGC*GLGAWR
Trigger: CCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQRDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGGGACAGGAGACTGTaGCATTGCCTTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGDRRL*HCLLGP
Trigger: CGGTCCCAAAAGGCAATGGCACAGTCTCCTGTCCCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGCCTGCTTGCTCCTCTaGTTGGGGCTGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQACLLL*LGLGVE
Trigger: TTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCAGGC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCGACGACCCCGCCTaGTTGCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGDDPA*LLLCLG
Trigger: CCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTCGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCATCTATCTGTGGCATaGTGCGGACTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQHLSVA*CGLWAG
Trigger: CCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQRTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTTGGTGCCTGGAGGGTaGGGTGGCACGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLVPGG*GGTPGP
Trigger: AGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGAGGCCCACTTGGGCTaGAGAGGTACCTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQEAHLG*RGTSVL
Trigger: AAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTATCGGGCTGCGGGTGTaGGTCCCACTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLIGLRV*VPLQGR
Trigger: CCGCCCCTGGAGTGGGACCCACACCCGCAGCCCGAT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGCTTGCTCAGGCGTCTaGAATTCTTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQACSGV*NSWGTL
Trigger: CAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGCAGGTGCGTTGGCTaGTGGAGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGRCVG*WRQGRA
Trigger: AGCCCTGCCCTGCCTCCATCAGCCAACGCACCTGCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCAGCTCCTTGTGCCTaGGTCGGGCCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLAAPCA*VGPGGP
Trigger: AGGACCCCCTGGCCCGACTCAGGCACAAGGAGCTGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGTCTCTAGCCAGGGATaGCTGGAAACCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQVSSQG*LETWWL
Trigger: AAGCCACCAGGTTTCCAGGCATCCCTGGCTAGAGAC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPTLSAA*TARLRA
Trigger: GGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTCCAGGGGCGGCAGGTaGTGCTGGGCCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEASRGGR*CWARRK
Trigger: CTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCTGGA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLHRALP*EDPGGL
Trigger: GAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTTTGGTGCCTGGAGGGTaGGGTGGCACGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLVPGG*GGTPGP
Trigger: AGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAA...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGCGGACTTGGTGCCTaGAGGGTGGGGTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCGLGA*RVGWHA
Trigger: GGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGMLRT*CLEGGV
Trigger: CACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGAATCAGAGAACCCCTaGCCTTGGGGTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQESENP*PWGRKL
Trigger: GAGCTTCCTACCCCAAGGCCAGGGGTTCTCTGATTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLGRRSQ*VPCDST
Trigger: GGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCTGTGGGCGGCCACTTaGCAGCTGGTTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLWAAT*QLVGLR
Trigger: CCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGTGGGGGAGAGGCTGTaGGCGGCCACTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGVGERL*AATWQL
Trigger: CAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCAC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCAGGGCAGGAGGTCTTaGTGGCTGGCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGQGRRS*WLAWGL
Trigger: AAGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCTTGGGGCTGGGAGTTaGAGATGCTTTTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQLGAGS*RCFSPR
Trigger: ACGAGGAGAAAAGCATCTTCAACTCCCAGCCCCAAG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCTGACTCGGAATCCTaGTGCCCATCGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPDSES*CPSGCG
Trigger: CCCGCAGCCCGATGGGCATCAGGATTCCGAGTCAGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCAGGGTCACCAAGATaGCAAGTGGCAGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPGSPR*QVAGPG
Trigger: CCCTGGCCCTGCCACTTGGCATCTTGGTGACCCTGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000223791.7
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCTTGGCTCCGGGGTGTaGTGGGCTCTGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLGSGV*WALWLF
Trigger: GAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAACCGCCATCTCGGCTaGCAGTGTCCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGNRHLG*QCPLQA
Trigger: AGCCTGGAGCGGACACTGGCAGCCGAGATGGCGGTT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGCGACGACCCCGCCTaGTTGCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGDDPA*LLLCLG
Trigger: CCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTCGCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCTGCCCTGCCGCGTTaGCCTGGGCTGGGGATTCAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPALPR*PGLGIQ
Trigger: CTGAATCCCCAGCCCAGGCCAACGCGGCAGGGCAGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGTACCTCTGTGCTTaGCTCCGGGGTGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRYLCA*LRGVLG
Trigger: GCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPERPT*AGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGCGGGGGCTGGGGGTaGGCTGATTGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGGGWG*ADCLVG
Trigger: CCCAACAAGACAATCAGCCCACCCCCAGCCCCCGCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGCTCACAGATGGCCTaGTCTCGCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSSQMA*SRPALV
Trigger: CACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCGGGCTGCCCTGGAGTaGCTGGTGCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGRAALE*LVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPDVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGTGGGGGAGAGGCTGTaGGCGGCCACTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAVGERL*AATWQL
Trigger: CAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCAC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGTGGCTGGGGCCCTCTaGCAAGGTTTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLVAGAL*QGFCQG
Trigger: GCCCTGGCAGAAACCTTGCCAGAGGGCCCCAGCCAC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGCAGGTGCGTTGGCTaGTGGAGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGRCVG*WRQGRA
Trigger: AGCCCTGCCCTGCCTCCATCAGCCAACGCACCTGCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCAGGGCAGGAGGTCTTaGTGGCTGGCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLQGRRS*WLAWGL
Trigger: AAGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGAACTCTGCTTGTTTCTaGGCCCACAAAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQNSACF*AHKATV
Trigger: GACAGTGGCTTTGTGGGCTCAGAAACAAGCAGAGTT...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLIGPGR*PCLAIQ
Trigger: CTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAAT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCAGTGGGTCCCCTGTaGCAGCACCACCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPVGPL*QHHPHP
Trigger: AGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCTCTGGGCCCCCAGTaGAGTCAGAAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPLGPQ*SQKRQE
Trigger: CTCCTGCCTCTTCTGACTTCACTGGGGGCCCAGAGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCTGGGCTGGGGGAGCTaGGGAGTCCTGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLGWGS*GVLEFH
Trigger: ATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCAGTGCCTGGGTCTaGTCTGCTGAGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLASAWV*SAEDWS
Trigger: GGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGACCCTGGTGGCCTCTaGTTTCCCTGGAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDPGGL*FPWSCS
Trigger: GCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLKLGAL*RRGPLG
Trigger: CCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGAACCGCCATCTCGGCTaGCAGTGTCCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLNRHLG*QCPLQA
Trigger: AGCCTGGAGCGGACACTGGCAGCCGAGATGGCGGTT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGGGCGGCAGGTGCTaGTGGGCCAGGCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRGGRC*WARRKS
Trigger: GGACTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCACCATTCCCGTGTaGATGCTGTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGTIPV*MLWLGW
Trigger: CCAGCCCAACCACAGCATCCACACGGGAATGGTGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPFQASP*SRQAAG
Trigger: CCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAGCAGGCAGGTGCGTTaGCTGATGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSRQVR*LMEAGQ
Trigger: CTGCCCTGCCTCCATCAGCCAACGCACCTGCCTGCT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPHRALP*EDPGGL
Trigger: GAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACAGGTCTCCTCCAGGTaGGGCCCACCGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIQVSSR*GPPPRC
Trigger: GCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGCCACTGTCTGTCTCTaGGGACGCCATCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGATVCL*GRHPGL
Trigger: GAGACCTGGATGGCGTCCCCAGAGACAGACAGTGGC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTGCTGTGCTGATGTaGGAGAGCCGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPAVLM*ESRCSG
Trigger: TCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGCCCTGGAGTGGCTaGTGCAGGCTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLPWSG*CRLSSS
Trigger: GCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTCCTCTGCTTGGGGCTaGGAGTTGAAGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQSSAWG*ELKMLF
Trigger: GAAAAGCATCTTCAACTCCCAGCCCCAAGCAGAGGA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCACCCATCTGCCTCTaGGCCCCCAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPPICL*APSEVR
Trigger: TCTGACTTCACTGGGGGCCCAGAGGCAGATGGGTGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGTGCGGGAGGCGGCCTaGCCTCATGGCCGCAGACCG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVVREAA*PHGRRP
Trigger: CGGTCTGCGGCCATGAGGCCAGGCCGCCTCCCGCAC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCCCCAGAGTCACCGCTaGTTCCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLPQSHR*FLSASA
Trigger: GGCCGATGCTGACAGGAACCAGCGGTGACTCTGGGG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGCATGCTGCGGACTCTaGGCTGGGGGAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAACCGL*AGGAEE
Trigger: CTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGGTGGGTGGATCACCTaGGGCTGGGAGTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLGGWIT*GWECKI
Trigger: GATCTTGCACTCCCAGCCTCAGGTGATCCACCCACC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTAGGGAAGGGCTGGGGTaGTGCAGAGGGCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLREGLG*CRGLGA
Trigger: GGCCCCAAGCCCTCTGCATCACCCCAGCCCTTCCCT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGTGACGTCTTTGTCTaGTTCCAGATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGDVFV*FQMCSL
Trigger: CAAGGAACACATCTGGAAGCAGACAAAGACGTCACC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGCTGCTTCTCCACTaGTCAACAGCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGLLLH*STAPPA
Trigger: TGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGGCTGCCTCAGCCTTaGCCAGGCCTGACATGTGCC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGLPQP*PGLTCA
Trigger: GGCACATGTCAGGCCTGGGCAAGGCTGAGGCAGCCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGEVPL*LAPGCA
Trigger: AGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAKLGAL*RRGPLG
Trigger: CCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTT...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPRDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGGACAGGAGACTGTaGCATTGCCTTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGDRRL*HCLLGP
Trigger: CGGTCCCAAAAGGCAATGGCACAGTCTCCTGTCCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGCGAGCTTCTCATCTaGCTGGTGGTAGAGCGGACG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSELLI*LVVERT
Trigger: CGTCCGCTCTACCACCAGGCAGATGAGAAGCTCGCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGNAEVC*CHGVGV
Trigger: CACCCCTACCCCGTGGCAGCAGCATACCTCTGCATT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPNAEVC*CHGVGV
Trigger: CACCCCTACCCCGTGGCAGCAGCATACCTCTGCATT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGCTCACTGTCCCACTaGTCCAGGACCTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGSLSH*SRTLPG
Trigger: GCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGACCCTGGTGATAGGGTaGGCAGGAGGCGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGTLVIG*AGGVSF
Trigger: AAAGGACACGCCTCCTGCCCACCCTATCACCAGGGT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAAGACCTTGGTCCCCTaGGGCACCATTCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLKTLVP*GTIPVW
Trigger: CCACACGGGAATGGTGCCCCAGGGGACCAAGGTCTT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTTTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLFQASP*SRQAAG
Trigger: CCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAA...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCACATTTACGTGCAATaGGCAGGGGCCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGHIYVQ*AGASAG
Trigger: GCCAGCACTGGCCCCTGCCCATTGCACGTAAATGTG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCATTCTCATGGCTTCTaGGAGAGACTTCACACTGAG +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQHSHGF*ERLHTE
Trigger: CTCAGTGTGAAGTCTCTCCCAGAAGCCATGAGAATG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCAGGTCTCCTCCAGGTaGGGCCCACCGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVQVSSR*GPPPRC
Trigger: GCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCTCGCTGCCTTCCTaGAGGGACAATCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGSLPS*RDNLLF
Trigger: GAAGAGCAGATTGTCCCTCCAGGAAGGCAGCGAGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGAAGGTGACCCTGTCTaGCCATCCAGCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGEGDPV*PSSTAH
Trigger: GTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEADVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCTGTGGGCGGCCACTTaGCAGCTGGTTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLWAAT*QLVGLR
Trigger: CCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCCACCCATCTGCCTCTaGGCCCCCAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLPPICL*APSEVR
Trigger: TCTGACTTCACTGGGGGCCCAGAGGCAGATGGGTGG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTAGGAGCTCGGGGCTaGTGGCATTGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLGARG*WHWERV
Trigger: GACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRLSLG*SRLTVP
Trigger: TGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCTTAGGAGGTGGTGGCTaGGGCCCTCTGGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLGGGG*GPLARF
Trigger: AAACCTTGCCAGAGGGCCCCAGCCACCACCTCCTAA...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGGCTTAGGAGGTGGTaGCTGGGGCCCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGLRRW*LGPSGK
Trigger: CTTGCCAGAGGGCCCCAGCCACCACCTCCTAAGCCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTGGGTGAGTATCCCCTaGTGCCGCCTCCAGCAGACA +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGWVSIP*CRLQQT
Trigger: TGTCTGCTGGAGGCGGCACCAGGGGATACTCACCCA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR TCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGCTTGCTCAGGCGTCTaGAATTCTTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGACSGV*NSWGTL
Trigger: CAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGCTCTGGAGTCTGGGTaGGGGGTGAAACTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLALESG*GVKLCL
Trigger: CAAGCAGAGTTTCACCCCTCACCCAGACTCCAGAGC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGCTCTGGAGTCTGGGTaGGGGGTGAAACTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGALESG*GVKLCL
Trigger: CAAGCAGAGTTTCACCCCTCACCCAGACTCCAGAGC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCTCTGGGCCCCCAGTaGAGTCAGAAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPLGPQ*SQKRQE
Trigger: CTCCTGCCTCTTCTGACTTCACTGGGGGCCCAGAGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCTGACTCGGAATCCTaGTGCCCATCGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPDSES*CPSGCG
Trigger: CCCGCAGCCCGATGGGCATCAGGATTCCGAGTCAGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGGCTGCTTCTCCACTaGTCAACAGCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGLLLH*STAPPA
Trigger: TGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGRRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGCCAGTGCCTGGGTCTaGTCTGCTGAGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPASAWV*SAEDWS
Trigger: GGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGGCTGCCTCAGCCTTaGCCAGGCCTGACATGTGCC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGLPQP*PGLTCA
Trigger: GGCACATGTCAGGCCTGGGCAAGGCTGAGGCAGCCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLQAEVG*PLPERP
Trigger: GGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCTGGCCATCCAGCACTaGCCACCCCTCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLLAIQH*PPLSFH
Trigger: ATGGAAAGAGAGGGGTGGGCAGTGCTGGATGGCCAG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTCGAGCTGGATGGAGTaGCGGTGTCTCCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPSSWME*RCLRAG
Trigger: ACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIETLSAA*TARLRA
Trigger: GGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPTLSAA*TARLRA
Trigger: GGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGAGCGAGCTTCTCATCTaGCTGGTGGTAGAGCGGACG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLSELLI*LVVERT
Trigger: CGTCCGCTCTACCACCAGGCAGATGAGAAGCTCGCT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLAEVCC*HGVGVR
Trigger: CCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLNAEVC*CHGVGV
Trigger: CACCCCTACCCCGTGGCAGCAGCATACCTCTGCATT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRNAEV*CCHGVG
Trigger: CCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGCTCATGGGAACTTaGTGGGCTGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRLMGT*WAVHIL
Trigger: GAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTACTGCTCCAGGACCTTaGCGGGCTGAGTTCAACGGA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLTAPGP*RAEFNG
Trigger: TCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGAATTCCATGGGGGTTaGCCGAGCAACACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLEFHGG*PSNTAS
Trigger: GGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCCTGCCGCGTTGGCCTaGGCTGGGGATTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRPAALA*AGDSGG
Trigger: GCCCCCTGAATCCCCAGCCCAGGCCAACGCGGCAGG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGCGTAGCTGGTCAATaGTGTTCTCGGCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGVAGQ*CSRPQR
Trigger: ACGCTGAGGCCGAGAACACCATTGACCAGCTACGCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGCAGAGCGGGGCTGTaGGATGGTGAAGGACAAGAC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCRAGL*DGEGQD
Trigger: GTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTGGCCAGGAACTGGCTaGCCTGAGAAGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAWPGTG*PEKPVP
Trigger: AGGCACTGGCTTCTCAGGCCAGCCAGTTCCTGGCCA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCAAAGGACTCCACCTTaGCCAGGAACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLQRTPP*PGTGWP
Trigger: AGGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGCTCAGGCTCTTGCTaGGTCTGGTCTATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGSGSC*VWSMCS
Trigger: GGAACACATAGACCAGACCCAGCAAGAGCCTGAGCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPHRALP*EDPGGL
Trigger: GAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGMLRT*CLEGGV
Trigger: CACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGTGCAAAGGCTTCTGTaGAAGGCGCTCAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGVQRLL*KALRDA
Trigger: GGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCAC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCAGGTCTCCTCCAGGTaGGGCCCACCGCCTCGGTGC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRQVSSR*GPPPRC
Trigger: GCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGGAAGCTCCATCCCTaGGCACAGATGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRKLHP*AQMQQR
Trigger: CCTTTGCTGCATCTGTGCCCAGGGATGGAGCTTCCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAGGTACCTCTGTGCTTaGCTCCGGGGTGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPRYLCA*LRGVLG
Trigger: GCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGAGGCCCACTTGGGCTaGAGAGGTACCTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLEAHLG*RGTSVL
Trigger: AAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPPERPT*AGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTTGCAGCTCACAGATaGCCTGGTCTCGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLAAHR*PGLALP
Trigger: GGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTGCCCTGGAGTGGCTaGTGCAGGCTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLPWSG*CRLSSS
Trigger: GCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCATCCCGAGCTGCCTGTaGACTGTCCTTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPIPSCL*TVLGGL
Trigger: AAGACCACCAAGGACAGTCCACAGGCAGCTCGGGAT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGTTAGGGGACAGAACATaGTATTCGTGGCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQLGDRT*YSWPVY
Trigger: ATACACAGGCCACGAATACCATGTTCTGTCCCCTAA...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTGGACCATCTGCCTCTaGGGGAGACCCAACTTGACC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGWTICL*GRPNLT
Trigger: GGTCAAGTTGGGTCTCCCCCAGAGGCAGATGGTCCA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGGACCATCTGCCTCTaGGGGAGACCCAACTTGACC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLWTICL*GRPNLT
Trigger: GGTCAAGTTGGGTCTCCCCCAGAGGCAGATGGTCCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEASLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGCTTGCTCCTCTGCTTaGGGCTGGGAGTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPACSSA*GWELKM
Trigger: CATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGTGGGCGGCCACTTaGCAGCTGGTTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLWAAT*QLVGLR
Trigger: CCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGTGGGGGAGAGGCTGTaGGCGGCCACTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVVGERL*AATWQL
Trigger: CAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCAC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCCAGGTCGAGCTGGATaGAGTGCCGGTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLPGRAG*SAGVSG
Trigger: CCCGGAGACACCGGCACTCCATCCAGCTCGACCTGG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCAGGTCGAGCTGGATaGAGTGCCGGTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPGRAG*SAGVSG
Trigger: CCCGGAGACACCGGCACTCCATCCAGCTCGACCTGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGGACCATGGTGGATaGCATCCTGGGCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGDHGG*HPGHFV
Trigger: TACAAAGTGCCCAGGATGCCATCCACCATGGTCCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCCCAGAGTCACCGCTaGTTCCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPQSHR*FLSASA
Trigger: GGCCGATGCTGACAGGAACCAGCGGTGACTCTGGGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTCATGGGAACTTGCTaGGCTGTCCACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLMGTC*AVHILC
Trigger: GCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGGCTGGTGTTTCCATaGCCTTCCAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGLVFP*PSKLRP
Trigger: TGGTCTCAGCTTGGAAGGCCATGGAAACACCAGCCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCATGCCCAAGAGCCATaGGGCTGGTGTTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGHAQEP*GWCFHG
Trigger: GCCATGGAAACACCAGCCCCATGGCTCTTGGGCATG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLRLSLG*SRLTVP
Trigger: TGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGTGGCTGGGGCCCTCTaGCAAGGTTTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPVAGAL*QGFCQG
Trigger: GCCCTGGCAGAAACCTTGCCAGAGGGCCCCAGCCAC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTTAGGAGGTGGTGGCTaGGGCCCTCTGGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLGGGG*GPLARF
Trigger: AAACCTTGCCAGAGGGCCCCAGCCACCACCTCCTAA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGCTTAGGAGGTGGTaGCTGGGGCCCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGLRRW*LGPSGK
Trigger: CTTGCCAGAGGGCCCCAGCCACCACCTCCTAAGCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAAAGTACTGGAAGGCTaGGCGCCATGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGKVLEG*APWLTP
Trigger: AGGCGTGAGCCATGGCGCCCAGCCTTCCAGTACTTT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCACAGATGGCCTGGCTaGTGGCCCCTGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLHRWPG*WPLDSW
Trigger: CCAGGAGTCCAGGGGCCACCAGCCAGGCCATCTGTG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR TCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLPQRTW*GACGSL
Trigger: AAGACTACCACAGGCTCCTCACCAAGTACGCTGAGG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACAGGGCAGGAGGTCTTaGTGGCTGGCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIQGRRS*WLAWGL
Trigger: AAGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCCTTGCCCAGGCCTaGCATGTGCCCGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSLAQA*HVPVSS
Trigger: GCTAGAGACGGGCACATGTCAGGCCTGGGCAAGGCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGCTGGGGGTGGGCTaGTTGTCTTGTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGLGVG*LSCWEG
Trigger: CCCTTCCCAACAAGACAATCAGCCCACCCCCAGCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGGCTGGGGGTGGGCTaGTTGTCTTGTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGLGVG*LSCWEG
Trigger: CCCTTCCCAACAAGACAATCAGCCCACCCCCAGCCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCTCTGGGCCCCCAGTaGAGTCAGAAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPLGPQ*SQKRQE
Trigger: CTCCTGCCTCTTCTGACTTCACTGGGGGCCCAGAGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEALCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTCCCGAAGTCTCTCCTaGCTCGGAATCCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEASRSLS*LGILMP
Trigger: GGGCATCAGGATTCCGAGTCAGGAGAGACTTCGGGA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGTCAGTCATGTCCAGCTaGCGGCCCTGCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVSVMSS*RPCWGS
Trigger: GCTCCCCCAGCAGGGCCGTCAGCTGGACATGACTGA...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGCAAGAGAATCACTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGKRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGTGATTCTCTTGCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAGGGTGATAGGACCATaGGCCCGAGGCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPRVIGP*ARGPDV
Trigger: GACATCAGGGCCTCGGGCTCATGGTCCTATCACCCT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLVLCQG*FSTAQQ
Trigger: CTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGAC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTGGCAGGGCCAGGGCTaGCCCCAGGCTGAGGCCGCA +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDWQGQG*PQAEAA
Trigger: TGCGGCCTCAGCCTGGGGGCAGCCCTGGCCCTGCCA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223791.7
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGCCAGTGCCTGGGTCTaGTCTGCTGAGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLASAWV*SAEDWS
Trigger: GGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGCCTCCAGCTCCCTaGGAGGATCAAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLPPAP*EDQIFQ
Trigger: CTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCAGACGGTATATCTCTaGCTCCAGCTCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAQTVYL*LQLPAR
Trigger: CCTCGCAGGGAGCTGGAGGCAGAGATATACCGTCTG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLTSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCTGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPCFPWS*SHPINF
Trigger: GAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCA...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGACCCTGGTGGCCTCTaGTTTCCCTGGAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPDPGGL*FPWSCS
Trigger: GCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGACTACTTTGGTGGGATaGTGCGGACTTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLTTLVG*CGLGAW
Trigger: CCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLEGAQR*RFPPGW
Trigger: CCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGPPPR*KGFCGR
Trigger: CCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGEVPL*LAPGCA
Trigger: AGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACCGCCATCTCGGCTaGCAGTGTCCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPINRHLG*QCPLQA
Trigger: AGCCTGGAGCGGACACTGGCAGCCGAGATGGCGGTT...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCCTGGTCTCGCCCTaGCCTGGTGAGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGLVSP*PGEQEA
Trigger: AGCTTCCTGCTCACCAGGGCAGGGCGAGACCAGGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEARDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCTTTCCATCCCGAGCTaGCTGTGGACTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLLSIPS*LWTVLG
Trigger: ACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGCTGGAGGGGCTGGTaGTGGGGGCGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGWRGW*WGRCCQ
Trigger: CTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATCGAGCTGGATGGAGTaGCGGTGTCTCCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSSWME*RCLRAG
Trigger: ACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTCGAGCTGGATGGAGTaGCGGTGTCTCCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSSWME*RCLRAG
Trigger: ACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCTCACTGTCCCACTaGTCCAGGACCTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGSLSH*SRTLPG
Trigger: GCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGCTCCACCACCGTCCTaGCGACCCAGTTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIAPPPS*RPSFRG
Trigger: TCCCCTGAAACTGGGTCGGCAGGACGGTGGTGGAGC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLAPRRS*SMVFSA
Trigger: GGCCGAGAACACCATTGACCAGCTACGCCTCGGGGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCAAAGGACTCCACCTTaGCCAGGAACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAQRTPP*PGTGWP
Trigger: AGGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGGCTCAGGCTCTTGCTaGGTCTGGTCTATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGGSGSC*VWSMCS
Trigger: GGAACACATAGACCAGACCCAGCAAGAGCCTGAGCC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCCTCTGCTTTCCCTaGAGTTGCAGCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGLCFP*SCSHPI
Trigger: GATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGATACCATCTTCTCCGTaGCCTCCTCCAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPIPSSP*PPPGEP
Trigger: GGGCTCCCCTGGAGGAGGCCACGGAGAAGATGGTAT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTAGCCAGGGATGCCTaGAAACCTGGTGGCTTCATA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLARDA*KPGGFI
Trigger: TATGAAGCCACCAGGTTTCCAGGCATCCCTGGCTAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGTGCAAAGGCTTCTGTaGAAGGCGCTCAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGVQRLL*KALRDA
Trigger: GGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCAC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCTCTGTGGCTCTTCTaGGAATCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLALWLF*ESENPW
Trigger: CCAGGGGTTCTCTGATTCCCAGAAGAGCCACAGAGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCTCACAGATGGCCTaGTCTCGCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSSQMA*SRPALV
Trigger: CACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGAAGGTGACCCTGTCTaGCCATCCAGCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPEGDPV*PSSTAH
Trigger: GTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTGTGCCATTGCCTTTTaGGACCGCCTTAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGCAIAF*DRLRGQ
Trigger: CTGTCCCCTAAGGCGGTCCCAAAAGGCAATGGCACA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGTGCCATTGCCTTTTaGGACCGCCTTAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCAIAF*DRLRGQ
Trigger: CTGTCCCCTAAGGCGGTCCCAAAAGGCAATGGCACA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACGRRSQ*VPCDST
Trigger: GGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGRRSQ*VPCDST
Trigger: GGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPSLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGATGCTTTTCTCCTCGTaGTGGCCTTCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLMLFSS*WPSLPQ
Trigger: CTGGGGCAGAGAAGGCCACCACGAGGAGAAAAGCAT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPVSPG*WGRGCG
Trigger: CCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEADTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGACACATGTCACCCTaGGGCCCTGACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGHMSP*GPDILK
Trigger: TTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGACACATGTCACCCTaGGGCCCTGACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGHMSP*GPDILK
Trigger: TTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGTGCGGGAGGCGGCCTaGCCTCATGGCCGCAGACCG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPVREAA*PHGRRP
Trigger: CGGTCTGCGGCCATGAGGCCAGGCCGCCTCCCGCAC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGCTGGCCATTGGGGCTaGCCTGGGCTTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACAGHWG*PGLHLG
Trigger: GCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTTCTCAGTCTCCGAGCTaGCCATTGGGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLSQSPS*PLGLAW
Trigger: CCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGA...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCAAGAGCCATGGGGCTaGTGTTTCCATGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLQEPWG*CFHGLP
Trigger: TGGAAGGCCATGGAAACACCAGCCCCATGGCTCTTG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGTGGCTGGGGCCCTCTaGCAAGGTTTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVVAGAL*QGFCQG
Trigger: GCCCTGGCAGAAACCTTGCCAGAGGGCCCCAGCCAC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGGCTTAGGAGGTGGTaGCTGGGGCCCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGLRRW*LGPSGK
Trigger: CTTGCCAGAGGGCCCCAGCCACCACCTCCTAAGCCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCAGTCAAAAGGGACTTaGCTAGGCAGCCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLQSKGT*LGSPTS
Trigger: TGAGGTGGGGCTGCCTAGCCAAGTCCCTTTTGACTG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCAGTCAAAAGGGACTTaGCTAGGCAGCCCCACCTCA +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLQSKGT*LGSPTS
Trigger: TGAGGTGGGGCTGCCTAGCCAAGTCCCTTTTGACTG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCAAGAGGCGGTTGCCTaGGCCAGGACAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACQEAVA*ARTGQG
Trigger: GCCCTGCCCTGTCCTGGCCCAGGCAACCGCCTCTTG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCAACTCTGCTTGTTTCTaGGCCCACAAAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPNSACF*AHKATV
Trigger: GACAGTGGCTTTGTGGGCTCAGAAACAAGCAGAGTT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVIGPGR*PCLAIQ
Trigger: CTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAAT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCAGTGGGTCCCCTGTaGCAGCACCACCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACPVGPL*QHHPHP
Trigger: AGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCCACACAGGGGACACTaGAGGGTATCAGCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVPHRGH*RVSAGG
Trigger: GCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGAGCCCCGCAGGCTGTaGGCCTGGCGCAGGTCGGCT +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKEPRRL*AWRRSA
Trigger: AGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTGTGGTGCTTCCTTCTaGCCTTGGGCACCTCCGTCT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPCGASF*PWAPPS
Trigger: AGACGGAGGTGCCCAAGGTCAGAAGGAAGCACCACA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307564.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGGGCTGGGGGAGCTaGGGAGTCCTGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLGWGS*GVLEFH
Trigger: ATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCCTGGACTCCTGGGTaGGTATCCCCTGGTGCCGCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPWTPG*VSPGAA
Trigger: GGCGGCACCAGGGGATACTCACCCAGGAGTCCAGGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCTCAACAGCACCTCCTaGACAATCTCAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLLNSTS*TISAGD
Trigger: GTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCGGCTCAGGCTCTTaGTGGGTCTGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGGSGS*WVWSMC
Trigger: ACACATAGACCAGACCCAGCAAGAGCCTGAGCCGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATCTGCAGCTCCTTGTaGCTGAGTCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVICSSL*LSRARG
Trigger: CCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGAT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLCFPWS*SHPINF
Trigger: GAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCCAGGCCTGACATGTaGCCGTCTCTAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPRPDM*PSLARD
Trigger: ATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGEVPL*LAPGCA
Trigger: AGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVKLGAL*RRGPLG
Trigger: CCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACQAEVG*PLPERP
Trigger: GGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCCTGGTCTCGCCCTaGCCTGGTGAGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGLVSP*PGEQEA
Trigger: AGCTTCCTGCTCACCAGGGCAGGGCGAGACCAGGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACATGGCCGCAGACCGTaGCCCAGCCCGGGCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKHGRRP*PSPGLA
Trigger: TGCCAGGCCCGGGCTGGGGCACGGTCTGCGGCCATG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCACTGCCTCCAGTTCTaGCATCTGGGCTTAGGAGGT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAHCLQF*HLGLGG
Trigger: ACCTCCTAAGCCCAGATGGCAGAACTGGAGGCAGTG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCGGCCATCCTGCCTGTaGCCTCTCTCGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPRPSCL*PLSGST
Trigger: GGTGGAGCCCGAGAGAGGGCACAGGCAGGATGGCCG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCTGCCGCGTTGGCCTaGGCTGGGGATTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPAALA*AGDSGG
Trigger: GCCCCCTGAATCCCCAGCCCAGGCCAACGCGGCAGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGTAGCTCTCATCTTTaGGGAATCTCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGSSHL*GISPGA
Trigger: GGCCCCGGGTGAGATTCCCCAAAGATGAGAGCTACC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGACCCTGGTGATAGGGTaGGCAGGAGGCGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPTLVIG*AGGVSF
Trigger: AAAGGACACGCCTCCTGCCCACCCTATCACCAGGGT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTAAGACCTTGGTCCCCTaGGGCACCATTCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLKTLVP*GTIPVW
Trigger: CCACACGGGAATGGTGCCCCAGGGGACCAAGGTCTT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCAGCCTTCAGCCGCTaGAAGCCCTTGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLAAFSR*KPLTWS
Trigger: GGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAATTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEFQASP*SRQAAG
Trigger: CCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAA...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGCTCTTGCTGGGTCTaGTCTATGTGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGSCWV*SMCSFS
Trigger: GCTGAAGGAACACATAGACCAGACCCAGCAAGAGCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGCCTCTGCTTTCCCTaGAGTTGCAGCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGLCFP*SCSHPI
Trigger: GATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTATACCATCTTCTCCGTaGCCTCCTCCAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLIPSSP*PPPGEP
Trigger: GGGCTCCCCTGGAGGAGGCCACGGAGAAGATGGTAT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTAGCCAGGGATGCCTaGAAACCTGGTGGCTTCATA +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLARDA*KPGGFI
Trigger: TATGAAGCCACCAGGTTTCCAGGCATCCCTGGCTAG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTGGTGCCTGGAGGGTaGGGTGGCACGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPLVPGG*GGTPGP
Trigger: AGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAA...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCCACTGTCTGTCTCTaGGGACGCCATCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLATVCL*GRHPGL
Trigger: GAGACCTGGATGGCGTCCCCAGAGACAGACAGTGGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGATGCAGCAAAGGGCTaGGCTAATGTTCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLDAAKG*ANVPAV
Trigger: CACAGCAGGAACATTAGCCCAGCCCTTTGCTGCATC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGAATCAGAGAACCCCTaGCCTTGGGGTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAESENP*PWGRKL
Trigger: GAGCTTCCTACCCCAAGGCCAGGGGTTCTCTGATTC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCGGGGGCTGGGGGTaGGCTGATTGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGGGWG*ADCLVG
Trigger: CCCAACAAGACAATCAGCCCACCCCCAGCCCCCGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCGGGCTGCCCTGGAGTaGCTGGTGCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRRAALE*LVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGTGGACTGTCCTTGGTaGTCTTGCTCTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPVDCPW*SCSSQR
Trigger: TCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCAC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGAAGGTGACCCTGTCTaGCCATCCAGCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLEGDPV*PSSTAH
Trigger: GTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCCTCTGCTTGGGGCTaGGAGTTGAAGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSSAWG*ELKMLF
Trigger: GAAAAGCATCTTCAACTCCCAGCCCCAAGCAGAGGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGCTTGCTCCTCTGCTTaGGGCTGGGAGTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAACSSA*GWELKM
Trigger: CATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGTCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVSPRSS*MECRCL
Trigger: GAGACACCGGCACTCCATCCAGCTCGACCTGGGCGA...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGTGCGGGAGGCGGCCTaGCCTCATGGCCGCAGACCG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKVREAA*PHGRRP
Trigger: CGGTCTGCGGCCATGAGGCCAGGCCGCCTCCCGCAC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATCTCAGTCTCCGAGCTaGCCATTGGGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPSQSPS*PLGLAW
Trigger: CCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCGGGGCTGGTGGCATTaGGAAAGAGTCTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLRGWWH*ERVSLL
Trigger: AAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGATCGGGCTGCGGGTGTaGGTCCCACTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKIGLRV*VPLQGR
Trigger: CCGCCCCTGGAGTGGGACCCACACCCGCAGCCCGAT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCAGGCAAGAGGCTCATaGGAACTTGCTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPQARGS*ELAGLS
Trigger: GGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGCATGCTGCGGACTCTaGGCTGGGGGAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRACCGL*AGGAEE
Trigger: CTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCAAATACAAGGTGGATaGGGTGGGGAGAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLQIQGG*GGESSG
Trigger: GCCTGAACTCTCCCCACCCCATCCACCTTGTATTTG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGATGGCCTGGCTGGTaGCCCCTGGACTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRRWPGW*PLDSWV
Trigger: CACCCAGGAGTCCAGGGGCCACCAGCCAGGCCATCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCATGTGTTCCTTGGGCTaGGGGCAGAAGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAMCSLG*GQKNLV
Trigger: GACCAGATTCTTCTGCCCTCAGCCCAAGGAACACAT...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPQRTW*GACGSL
Trigger: AAGACTACCACAGGCTCCTCACCAAGTACGCTGAGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGGCAGGTGCGTTGGCTaGTGGAGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDGRCVG*WRQGRA
Trigger: AGCCCTGCCCTGCCTCCATCAGCCAACGCACCTGCC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCAGCTCCTTGTGCCTaGGTCGGGCCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPAAPCA*VGPGGP
Trigger: AGGACCCCCTGGCCCGACTCAGGCACAAGGAGCTGC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCAGCTCCTTGTGCCTaGGTCGGGCCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAAPCA*VGPGGP
Trigger: AGGACCCCCTGGCCCGACTCAGGCACAAGGAGCTGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGCCTTGCCCAGGCCTaGCATGTGCCCGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRSLAQA*HVPVSS
Trigger: GCTAGAGACGGGCACATGTCAGGCCTGGGCAAGGCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTCAGTCATGTCCAGCTaGCGGCCCTGCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPSVMSS*RPCWGS
Trigger: GCTCCCCCAGCAGGGCCGTCAGCTGGACATGACTGA...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGCAAGAGAATCACTTaGACCCGGGAGGCGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGKRIT*TREAEV
Trigger: AACCTCCGCCTCCCGGGTTCAAGTGATTCTCTTGCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGAGGGAAGGGCTGGGGTaGTGCAGAGGGCTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPREGLG*CRGLGA
Trigger: GGCCCCAAGCCCTCTGCATCACCCCAGCCCTTCCCT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGTGACGTCTTTGTCTaGTTCCAGATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGDVFV*FQMCSL
Trigger: CAAGGAACACATCTGGAAGCAGACAAAGACGTCACC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCTCAACAGCACCTCCTaGACAATCTCAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEALNSTS*TISAGD
Trigger: GTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGGCTGCTTCTCCACTaGTCAACAGCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGLLLH*STAPPA
Trigger: TGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPVLCQG*FSTAQQ
Trigger: CTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGAC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGCATGAGACGTCCTaGCTGTATCAGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGHETS*LYQSFK
Trigger: TTTGAAAGACTGATACAGGCAGGACGTCTCATGCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCTGCCTCCAGCTCCCTaGGAGGATCAAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLPPAP*EDQIFQ
Trigger: CTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCCCAGGCCTGACATGTaGCCGTCTCTAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVPRPDM*PSLARD
Trigger: ATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGGCTGCCTCAGCCTTaGCCAGGCCTGACATGTGCC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGLPQP*PGLTCA
Trigger: GGCACATGTCAGGCCTGGGCAAGGCTGAGGCAGCCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTCAGAAATCCGTTTGTaGCCCTCAAACTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGSEIRL*PSNSEP
Trigger: TGGCTCAGAGTTTGAGGGGCACAAACGGATTTCTGA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGGCGTGTCGGGCTaGCCTGGAGTGGCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKLGVSG*PGVAGA
Trigger: TGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEAVKGR*WACRAA
Trigger: GGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGAAGACCTGGCTCGCTaGCTTCCTGGAGGGACAATC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLEDLAR*LPGGTI
Trigger: GATTGTCCCTCCAGGAAGGCAGCGAGCCAGGTCTTC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGGCCATCCAGCACTaGCCACCCCTCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLAIQH*PPLSFH
Trigger: ATGGAAAGAGAGGGGTGGGCAGTGCTGGATGGCCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGGGACAGGAGACTGTaGCATTGCCTTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGDRRL*HCLLGP
Trigger: CGGTCCCAAAAGGCAATGGCACAGTCTCCTGTCCCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGCCTGCTTGCTCCTCTaGTTGGGGCTGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIACLLL*LGLGVE
Trigger: TTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCAGGC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGTGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPRNAEV*CCHGVG
Trigger: CCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTACTGCTCCAGGACCTTaGCGGGCTGAGTTCAACGGA +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLTAPGP*RAEFNG
Trigger: TCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTTGCCCGAGCAACACTaGCTCCAGTTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLPEQH*LQFCHL
Trigger: CAGATGGCAGAACTGGAGGCAGTGTTGCTCGGGCAA...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGAATTCCATGGGGGTTaGCCGAGCAACACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLEFHGG*PSNTAS
Trigger: GGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCATCTATCTGTGGCATaGTGCGGACTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPHLSVA*CGLWAG
Trigger: CCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCCCCCTGTCTCCATTaGGCCCTGGCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAPCLH*ALAHLQ
Trigger: CTGGAGGTGGGCCAGGGCGCAATGGAGACAGGGGGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGTAGCTCTCATCTTTaGGGAATCTCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGSSHL*GISPGA
Trigger: GGCCCCGGGTGAGATTCCCCAAAGATGAGAGCTACC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGCGTAGCTGGTCAATaGTGTTCTCGGCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGVAGQ*CSRPQR
Trigger: ACGCTGAGGCCGAGAACACCATTGACCAGCTACGCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCACCATTCCCGTGTaGATGCTGTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGTIPV*MLWLGW
Trigger: CCAGCCCAACCACAGCATCCACACGGGAATGGTGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAAGACCTTGGTCCCCTaGGGCACCATTCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPKTLVP*GTIPVW
Trigger: CCACACGGGAATGGTGCCCCAGGGGACCAAGGTCTT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATGGCCAGGAACTGGCTaGCCTGAGAAGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPWPGTG*PEKPVP
Trigger: AGGCACTGGCTTCTCAGGCCAGCCAGTTCCTGGCCA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCAGCCTTCAGCCGCTaGAAGCCCTTGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPAAFSR*KPLTWS
Trigger: GGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDSSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACACATTTACGTGCAATaGGCAGGGGCCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLHIYVQ*AGASAG
Trigger: GCCAGCACTGGCCCCTGCCCATTGCACGTAAATGTG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTGCGGACTTGGTGCCTaGAGGGTGGGGTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDCGLGA*RVGWHA
Trigger: GGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGTCATACTACTTTGGTaGGATGCTGCGGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLVILLW*DAADLV
Trigger: CACCAAGTCCGCAGCATCCCACCAAAGTAGTATGAC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGTCATACTACTTTaGTGGGATGCTGCGGACTTG +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLVILL*WDAADL
Trigger: CAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAG...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCCTGCTGTGCTGATGTaGGAGAGCCGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVPAVLM*ESRCSG
Trigger: TCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACCTGCTGTGCTGATGTaGGAGAGCCGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPPAVLM*ESRCSG
Trigger: TCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGCGGGGGCTGGGGGTaGGCTGATTGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGGGWG*ADCLVG
Trigger: CCCAACAAGACAATCAGCCCACCCCCAGCCCCCGCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGCTCGCTGCCTTCCTaGAGGGACAATCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGSLPS*RDNLLF
Trigger: GAAGAGCAGATTGTCCCTCCAGGAAGGCAGCGAGCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGATCCCGAGCTGCCTGTaGACTGTCCTTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPIPSCL*TVLGGL
Trigger: AAGACCACCAAGGACAGTCCACAGGCAGCTCGGGAT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATGGACCATCTGCCTCTaGGGGAGACCCAACTTGACC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLWTICL*GRPNLT
Trigger: GGTCAAGTTGGGTCTCCCCCAGAGGCAGATGGTCCA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGTACACAGCGGCAGGTaGATAAGGCATGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAVHSGR*IRHDGN
Trigger: GTTCCCATCATGCCTTATCCACCTGCCGCTGTGTAC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCAGGTCGAGCTGGATaGAGTGCCGGTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPGRAG*SAGVSG
Trigger: CCCGGAGACACCGGCACTCCATCCAGCTCGACCTGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGTGGTGGATGGCATCCTaGGCACTTTGTAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLWWMAS*ALCSLS
Trigger: AGACAAGCTACAAAGTGCCCAGGATGCCATCCACCA...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGGGACCATGGTGGATaGCATCCTGGGCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGDHGG*HPGHFV
Trigger: TACAAAGTGCCCAGGATGCCATCCACCATGGTCCCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCACTGATAAACGCCACTaGGATCCTAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGTDKRH*DPRRSW
Trigger: CCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCATTGGGGCTGGCCTaGGCTTCACCTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACPLGLA*ASPGPL
Trigger: AAGTGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCTGGCCATTGGGGCTaGCCTGGGCTTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAGHWG*PGLHLG
Trigger: GCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTAGGAGCTCGGGGCTaGTGGCATTGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLGARG*WHWERV
Trigger: GACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTCATGGGAACTTGCTaGGCTGTCCACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLMGTC*AVHILC
Trigger: GCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCAAGAGCCATGGGGCTaGTGTTTCCATGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPQEPWG*CFHGLP
Trigger: TGGAAGGCCATGGAAACACCAGCCCCATGGCTCTTG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACATGCCCAAGAGCCATaGGGCTGGTGTTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIHAQEP*GWCFHG
Trigger: GCCATGGAAACACCAGCCCCATGGCTCTTGGGCATG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGCTGAGTTCAACGGATaGGTTGACCTCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGAEFNG*VDLGMF
Trigger: GAACATTCCGAGGTCAACCCATCCGTTGAACTCAGC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAAGTACTGGAAGGCTaGGCGCCATGGCTCACGCCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLKVLEG*APWLTP
Trigger: AGGCGTGAGCCATGGCGCCCAGCCTTCCAGTACTTT...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCAGGTGCTCCCTAAATaGCAGGTGCTGTTTGCTACT +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGQVLPK*QVLFAT
Trigger: AGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAAGAGGCGGTTGCCTaGGCCAGGACAGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQEAVA*ARTGQG
Trigger: GCCCTGCCCTGTCCTGGCCCAGGCAACCGCCTCTTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGATGTGTTCCTTGGGCTaGGGGCAGAAGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPMCSLG*GQKNLV
Trigger: GACCAGATTCTTCTGCCCTCAGCCCAAGGAACACAT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGCCTTGCCCAGGCCTaGCATGTGCCCGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESLAQA*HVPVSS
Trigger: GCTAGAGACGGGCACATGTCAGGCCTGGGCAAGGCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEIGPGR*PCLAIQ
Trigger: CTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAAT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCAGTGGGTCCCCTGTaGCAGCACCACCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPVGPL*QHHPHP
Trigger: AGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCAGGTGGATAAGGCATaGTGGGAACCGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPQVDKA*WEPRRC
Trigger: ACATCTCCTCGGTTCCCATCATGCCTTATCCACCTG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACTCATACCCCAACCTTaGGGAGCTCTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPLIPQP*GALSSL
Trigger: GAGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTCATACCCCAACCTTaGGGAGCTCTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLIPQP*GALSSL
Trigger: GAGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGTCTGGGCAGCGGCCTaGCCTGCCGCGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPVWAAA*PAALAW
Trigger: CCAGGCCAACGCGGCAGGGCAGGCCGCTGCCCAGAC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTCAACAGCACCTCCTaGACAATCTCAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLNSTS*TISAGD
Trigger: GTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIVLCQG*FSTAQQ
Trigger: CTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGAC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVRRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGGCATGAGACGTCCTaGCTGTATCAGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGHETS*LYQSFK
Trigger: TTTGAAAGACTGATACAGGCAGGACGTCTCATGCCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGCCTCCAGCTCCCTaGGAGGATCAAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLPPAP*EDQIFQ
Trigger: CTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPITSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAATCTGCAGCTCCTTGTaGCTGAGTCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEICSSL*LSRARG
Trigger: CCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGAT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACTACTTTGGTGGGATaGTGCGGACTTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPTTLVG*CGLGAW
Trigger: CCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGPPPR*KGFCGR
Trigger: CCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACTTGGCTCCGGGGTGTaGTGGGCTCTGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIELGSGV*WALWLF
Trigger: GAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACGEVPL*LAPGCA
Trigger: AGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQAEVG*PLPERP
Trigger: GGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPQAEVG*PLPERP
Trigger: GGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGGCGACGACCCCGCCTaGTTGCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKGDDPA*LLLCLG
Trigger: CCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTCGCC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPILELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGGAAAGGCCTCTGCTaGCATAGAAAAGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGKGLC*HRKAGH
Trigger: GTGTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAEVCC*HGVGVR
Trigger: CCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRNAEV*CCHGVG
Trigger: CCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTTGCCCGAGCAACACTaGCTCCAGTTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLPEQH*LQFCHL
Trigger: CAGATGGCAGAACTGGAGGCAGTGTTGCTCGGGCAA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCAGCAACTTGCTGTGTaGCTCATTTACATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGQQLAV*LIYISG
Trigger: GCCAGAGATGTAAATGAGGCACACAGCAAGTTGCTG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAGCATCGGCCATCCTaGCTGTGCCCTCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQHRPS*LCPLSG
Trigger: GCCCGAGAGAGGGCACAGGCAGGATGGCCGATGCTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGTAGCTCTCATCTTTaGGGAATCTCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGSSHL*GISPGA
Trigger: GGCCCCGGGTGAGATTCCCCAAAGATGAGAGCTACC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCTGCACAATCTCAGCTaGAGACTTGAAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEALHNLS*RLEDEG
Trigger: CCCCTCATCTTCAAGTCTCCAGCTGAGATTGTGCAG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCACCATTCCCGTGTaGATGCTGTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGTIPV*MLWLGW
Trigger: CCAGCCCAACCACAGCATCCACACGGGAATGGTGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATGGAAGCCCTTGACTTaGTCCTGGGGCATGAGACGT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLWKPLT*SWGMRR
Trigger: ACGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGCTCTTGCTGGGTCTaGTCTATGTGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGSCWV*SMCSFS
Trigger: GCTGAAGGAACACATAGACCAGACCCAGCAAGAGCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCAGCAGGCAGGTGCGTTaGCTGATGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPSRQVR*LMEAGQ
Trigger: CTGCCCTGCCTCCATCAGCCAACGCACCTGCCTGCT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCTGCCTGGAAACCTGGTaGCTTCATAGATACCATCTT +
Preference number: 4 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPCLETW*LHRYHL
Trigger: AAGATGGTATCTATGAAGCCACCAGGTTTCCAGGCA...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDGMLRT*CLEGGV
Trigger: CACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGTCATACTACTTTGGTaGGATGCTGCGGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAVILLW*DAADLV
Trigger: CACCAAGTCCGCAGCATCCCACCAAAGTAGTATGAC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCCTGCTGTGCTGATGTaGGAGAGCCGGTGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRPAVLM*ESRCSG
Trigger: TCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGAAGCTCCATCCCTaGGCACAGATGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPRKLHP*AQMQQR
Trigger: CCTTTGCTGCATCTGTGCCCAGGGATGGAGCTTCCT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCAGGTACCTCTGTGCTTaGCTCCGGGGTGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPRYLCA*LRGVLG
Trigger: GCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPERPT*AGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGCTCACAGATGGCCTaGTCTCGCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESSQMA*SRPALV
Trigger: CACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACTTGCAGCTCACAGATaGCCTGGTCTCGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIELAAHR*PGLALP
Trigger: GGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCGGGCTGCCCTGGAGTaGCTGGTGCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKRAALE*LVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTGTGCCATTGCCTTTTaGGACCGCCTTAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPCAIAF*DRLRGQ
Trigger: CTGTCCCCTAAGGCGGTCCCAAAAGGCAATGGCACA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCACCACCCGCATCCTaGGTCCTAATGGGCCGGCAG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPAPPAS*VLMGRQ
Trigger: CTGCCGGCCCATTAGGACCCAGGATGCGGGTGGTGC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEDVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGTACACAGCGGCAGGTaGATAAGGCATGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPVHSGR*IRHDGN
Trigger: GTTCCCATCATGCCTTATCCACCTGCCGCTGTGTAC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGTACACAGCGGCAGGTaGATAAGGCATGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPVHSGR*IRHDGN
Trigger: GTTCCCATCATGCCTTATCCACCTGCCGCTGTGTAC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCAGGTCGAGCTGGATaGAGTGCCGGTGTCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPGRAG*SAGVSG
Trigger: CCCGGAGACACCGGCACTCCATCCAGCTCGACCTGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAATCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESPRSS*MECRCL
Trigger: GAGACACCGGCACTCCATCCAGCTCGACCTGGGCGA...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGGGCTGGTGTTTCCATaGCCTTCCAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPGLVFP*PSKLRP
Trigger: TGGTCTCAGCTTGGAAGGCCATGGAAACACCAGCCC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPRLSLG*SRLTVP
Trigger: TGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGAGCTGAGGAGTCCTaGAATTCCATGGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGAEES*NSMGVA
Trigger: GGCAACCCCCATGGAATTCCAGGACTCCTCAGCTCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTCCTCCATCTATCTGTaGCATGCTGCGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPSSIYL*HAADSG
Trigger: CCCAGAGTCCGCAGCATGCCACAGATAGATGGAGGA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTACCAGTTTGGGCAGATaGCCCATTGGAACCCCACTC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLTSLGR*PIGTPL
Trigger: GAGTGGGGTTCCAATGGGCCATCTGCCCAAACTGGT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGCTCACAGATGGCCTaGCTGGTGGCCCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESSQMA*LVAPGL
Trigger: GAGTCCAGGGGCCACCAGCCAGGCCATCTGTGAGCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374079.8
3UTR CAA 72 bp TGTGAGGGGACTGGTGCTCCTGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCCCCTCCACTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: CEGTGAPGKSLL*VTELTPPPLGK
Trigger: CTTTCCAAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
3UTR CAA 72 bp CAGGCAGAGCACCCAACAGGTCCCCTGGGAAAGGGCTaGGCTGGGCATCAAACCTACCACCCCATAAACTTG +
Preference number: 4 (lower is better)
Translates to: QAEHPTGPLGKG*AGHQTYHPINL
Trigger: CAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGGGTGCTCTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTATGTGTTCCTTGGGCTaGGGGCAGAAGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLMCSLG*GQKNLV
Trigger: GACCAGATTCTTCTGCCCTCAGCCCAAGGAACACAT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCTGGGTCTGCTCTGCTaGGGACTGGTCCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRLGLLC*GLVLRD
Trigger: ATCTCTGAGGACCAGTCCTCAGCAGAGCAGACCCAG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCCACACAGGGGACACTaGAGGGTATCAGCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDPHRGH*RVSAGG
Trigger: GCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCAGGAGAGACTGCCTaGGGTTCTGCCTGGACCGAA +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPGETA*GSAWTE
Trigger: TTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCTATGCCCTTCCCAGTaGTGCTTGCCCCAGAGTGAC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACLCPSQ*CLPQSD
Trigger: GTCACTCTGGGGCAAGCATCACTGGGAAGGGCATAG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCTGGGCTGGGGGAGCTaGGGAGTCCTGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPLGWGS*GVLEFH
Trigger: ATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVTSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPTSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLCFPWS*SHPINF
Trigger: GAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCCAGGCCTGACATGTaGCCGTCTCTAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPRPDM*PSLARD
Trigger: ATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPEGAQR*RFPPGW
Trigger: CCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDEGAQR*RFPPGW
Trigger: CCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKGPPPR*KGFCGR
Trigger: CCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTTGGCTCCGGGGTGTaGTGGGCTCTGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLGSGV*WALWLF
Trigger: GAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEACPWWS*SSQRTV
Trigger: CACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTGCTGGGGGCGCTGTTaGCAGATACCACAGTCCGGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDCWGRC*QIPQSG
Trigger: CCCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGAAAGGCCTCTGCTaGCATAGAAAAGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGKGLC*HRKAGH
Trigger: GTGTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAATGCAGAGGTATGCTaGTGCCACGGGGTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACNAEVC*CHGVGV
Trigger: CACCCCTACCCCGTGGCAGCAGCATACCTCTGCATT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGCTGTCCACATCCTCTaGTTCAGCCTCTGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPAVHIL*FSLWKD
Trigger: GTCTTTCCAGAGGCTGAAGCAGAGGATGTGGACAGC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374075.9
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRRTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTGCAGAGCGGGGCTGTaGGATGGTGAAGGACAAGAC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACCRAGL*DGEGQD
Trigger: GTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCAAAGGACTCCACCTTaGCCAGGAACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACQRTPP*PGTGWP
Trigger: AGGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGTGGAAGCCCTTGACTTaGTCCTGGGGCATGAGACGT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVWKPLT*SWGMRR
Trigger: ACGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCA...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCATTCTCATGGCTTCTaGGAGAGACTTCACACTGAG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAHSHGF*ERLHTE
Trigger: CTCAGTGTGAAGTCTCTCCCAGAAGCCATGAGAATG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGCCTCTGCTTTCCCTaGAGTTGCAGCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGLCFP*SCSHPI
Trigger: GATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAATACCATCTTCTCCGTaGCCTCCTCCAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEIPSSP*PPPGEP
Trigger: GGGCTCCCCTGGAGGAGGCCACGGAGAAGATGGTAT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTGGTCATACTACTTTaGTGGGATGCTGCGGACTTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLVILL*WDAADL
Trigger: CAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCGCTTCCCTCCAGGCTaGTCATACTACTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVRFPPG*SYYFGG
Trigger: CCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGCTCTGTGGCTCTTCTaGGAATCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVALWLF*ESENPW
Trigger: CCAGGGGTTCTCTGATTCCCAGAAGAGCCACAGAGC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPERPT*AGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTTGCAGCTCACAGATaGCCTGGTCTCGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLAAHR*PGLALP
Trigger: GGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGTGGACTGTCCTTGGTaGTCTTGCTCTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPVDCPW*SCSSQR
Trigger: TCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCAC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTTTAGGGGACAGAACATaGTATTCGTGGCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLLGDRT*YSWPVY
Trigger: ATACACAGGCCACGAATACCATGTTCTGTCCCCTAA...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTCCTCTGCTTGGGGCTaGGAGTTGAAGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPSSAWG*ELKMLF
Trigger: GAAAAGCATCTTCAACTCCCAGCCCCAAGCAGAGGA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDSPRSS*MECRCL
Trigger: GAGACACCGGCACTCCATCCAGCTCGACCTGGGCGA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGTCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPSPRSS*MECRCL
Trigger: GAGACACCGGCACTCCATCCAGCTCGACCTGGGCGA...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGACACATGTCACCCTaGGGCCCTGACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGHMSP*GPDILK
Trigger: TTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCATTGGGGCTGGCCTaGGCTTCACCTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPLGLA*ASPGPL
Trigger: AAGTGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGAGCTCGGGGCTGGTaGCATTGGGAAAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGARGW*HWERVS
Trigger: AGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGGCTGGTGTTTCCATaGCCTTCCAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGLVFP*PSKLRP
Trigger: TGGTCTCAGCTTGGAAGGCCATGGAAACACCAGCCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGGAAAGGGCTTGGCTaGGCATCAAACCTACCACCC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGKGLG*ASNLPP
Trigger: GGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAACCAGTTTGGGCAGATaGCCCATTGGAACCCCACTC +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPTSLGR*PIGTPL
Trigger: GAGTGGGGTTCCAATGGGCCATCTGCCCAAACTGGT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAGGGAGTGGCTTAGGTaGCGTCTTTGTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPREWLR*RLCLLP
Trigger: TGGAAGCAGACAAAGACGTCACCTAAGCCACTCCCT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGCTTGCTCAGGCGTCTaGAATTCTTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACACSGV*NSWGTL
Trigger: CAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCTTGGTCCTGGGGCATaGGACGTCCTGCCTGTATCA +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPLGPGA*DVLPVS
Trigger: TGATACAGGCAGGACGTCTCATGCCCCAGGACCAAG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCTCTGGAGTCTGGGTaGGGGGTGAAACTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEALESG*GVKLCL
Trigger: CAAGCAGAGTTTCACCCCTCACCCAGACTCCAGAGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTTGGGGCTGGGAGTTaGAGATGCTTTTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLGAGS*RCFSPR
Trigger: ACGAGGAGAAAAGCATCTTCAACTCCCAGCCCCAAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCAGGTGGATAAGGCATaGTGGGAACCGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVQVDKA*WEPRRC
Trigger: ACATCTCCTCGGTTCCCATCATGCCTTATCCACCTG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKLAQVG*QRASHL
Trigger: CAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACAGGGTGATAGGACCATaGGCCCGAGGCCCTGATGTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDRVIGP*ARGPDV
Trigger: GACATCAGGGCCTCGGGCTCATGGTCCTATCACCCT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCGCCCCTGCCGTGGTTaGGGCCGCCTCGCCTCGGCA +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFRPCRG*GRLASA
Trigger: TGCCGAGGCGAGGCGGCCTCAACCACGGCAGGGGCG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIERRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGCGGCTCAGGCTCTTaGTGGGTCTGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGGSGS*WVWSMC
Trigger: ACACATAGACCAGACCCAGCAAGAGCCTGAGCCGCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGCGGCTCAGGCTCTTaGTGGGTCTGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGGSGS*WVWSMC
Trigger: ACACATAGACCAGACCCAGCAAGAGCCTGAGCCGCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAATCTGCAGCTCCTTGTaGCTGAGTCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKICSSL*LSRARG
Trigger: CCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGAT...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGACCCTGGTGGCCTCTaGTTTCCCTGGAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDDPGGL*FPWSCS
Trigger: GCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCCAGGCCTGACATGTaGCCGTCTCTAGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPRPDM*PSLARD
Trigger: ATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPCPWWS*SSQRTV
Trigger: CACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCTTTCCATCCCGAGCTaGCTGTGGACTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACLSIPS*LWTVLG
Trigger: ACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLTLSAA*TARLRA
Trigger: GGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGCCTGGCAGGCCACCTaGCCACCCACCCACCCATCT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPAWQAT*PPTHPS
Trigger: AGATGGGTGGGTGGGTGGGCAGGTGGCCTGCCAGGC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIERTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCACACATTCCAGAAATaGAGAGGTATGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPHTFQK*RGMLLP
Trigger: TGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACGGCCATCCTGCCTGTaGCCTCTGTGTGGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKRPSCL*PLCGAS
Trigger: GGAAGCACCACACAGAGGGCACAGGCAGGATGGCCG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307564.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGCACAATCTCAGCTaGAGACTTGAAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLHNLS*RLEDEG
Trigger: CCCCTCATCTTCAAGTCTCCAGCTGAGATTGTGCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKAPRRS*SMVFSA
Trigger: GGCCGAGAACACCATTGACCAGCTACGCCTCGGGGC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIERTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGTGGCCAGGAACTGGCTaGCCTGAGAAGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKWPGTG*PEKPVP
Trigger: AGGCACTGGCTTCTCAGGCCAGCCAGTTCCTGGCCA...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGCTCAGGCTCTTGCTaGGTCTGGTCTATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGSGSC*VWSMCS
Trigger: GGAACACATAGACCAGACCCAGCAAGAGCCTGAGCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCTCCTCCATTCTCATaGCTTCTGGGAGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPPPFS*LLGETS
Trigger: TGAAGTCTCTCCCAGAAGCCATGAGAATGGAGGAGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTAGCCAGGGATGCCTaGAAACCTGGTGGCTTCATA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLARDA*KPGGFI
Trigger: TATGAAGCCACCAGGTTTCCAGGCATCCCTGGCTAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGGTCATACTACTTTaGTGGGATGCTGCGGACTTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLVILL*WDAADL
Trigger: CAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLGAPGG*GVCWPA
Trigger: GGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCAGGCAATCTCTCTGTaGATTTACTGCCATAATGGG +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAQAISL*IYCHNG
Trigger: CCCATTATGGCAGTAAATCCACAGAGAGATTGCCTG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGTCGTGGCCTGTGTATTaGCCCCGGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPSWPVY*PRKVTL
Trigger: CAGGGTCACCTTCCGGGGCCAATACACAGGCCACGA...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPGRRSQ*VPCDST
Trigger: GGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTGGACCATCTGCCTCTaGGGGAGACCCAACTTGACC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPWTICL*GRPNLT
Trigger: GGTCAAGTTGGGTCTCCCCCAGAGGCAGATGGTCCA...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGCTTGCTCCTCTGCTTaGGGCTGGGAGTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACACSSA*GWELKM
Trigger: CATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAACTATGCGGGCCTTCTaGGCCTCAGCAGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKTMRAF*ASAAPA
Trigger: GGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGT...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATGGTGGATGGCATCCTaGGCACTTTGTAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLWWMAS*ALCSLS
Trigger: AGACAAGCTACAAAGTGCCCAGGATGCCATCCACCA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTGGTGGATGGCATCCTaGGCACTTTGTAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPWWMAS*ALCSLS
Trigger: AGACAAGCTACAAAGTGCCCAGGATGCCATCCACCA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGGGACCATGGTGGATaGCATCCTGGGCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGDHGG*HPGHFV
Trigger: TACAAAGTGCCCAGGATGCCATCCACCATGGTCCCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACTGATAAACGCCACTaGGATCCTAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPTDKRH*DPRRSW
Trigger: CCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACAGGCAAGAGGCTCATaGGAACTTGCTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEQARGS*ELAGLS
Trigger: GGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCAGGCAAGAGGCTCATaGGAACTTGCTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPQARGS*ELAGLS
Trigger: GGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCAAGAGCCATGGGGCTaGTGTTTCCATGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACQEPWG*CFHGLP
Trigger: TGGAAGGCCATGGAAACACCAGCCCCATGGCTCTTG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGTCCTGGAATTCCATaGGGGTTGCCCGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRSPGIP*GLPEQH
Trigger: GTGTTGCTCGGGCAACCCCCATGGAATTCCAGGACT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGAGGGCAGAAGAATCTaGTCGTTTCTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPEGRRI*SFLSSI
Trigger: GATGGAGGAGAGAAACGACCAGATTCTTCTGCCCTC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACAGGTGCTCCCTAAATaGCAGGTGCTGTTTGCTACT +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIQVLPK*QVLFAT
Trigger: AGTAGCAAACAGCACCTGCCATTTAGGGAGCACCTG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGGGAGTGGCTTAGGTaGCGTCTTTGTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACREWLR*RLCLLP
Trigger: TGGAAGCAGACAAAGACGTCACCTAAGCCACTCCCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGCTTGCTCAGGCGTCTaGAATTCTTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPACSGV*NSWGTL
Trigger: CAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPPQRTW*GACGSL
Trigger: AAGACTACCACAGGCTCCTCACCAAGTACGCTGAGG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTGGGTCTGCTCTGCTaGGGACTGGTCCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLGLLC*GLVLRD
Trigger: ATCTCTGAGGACCAGTCCTCAGCAGAGCAGACCCAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGAACTCTGCTTGTTTCTaGGCCCACAAAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVNSACF*AHKATV
Trigger: GACAGTGGCTTTGTGGGCTCAGAAACAAGCAGAGTT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTCATACCCCAACCTTaGGGAGCTCTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLIPQP*GALSSL
Trigger: GAGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCATGGCCTTCCAAGCTaGGACCAGCCTCATACCCCA +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKHGLPS*DQPHTP
Trigger: TGGGGTATGAGGCTGGTCTCAGCTTGGAAGGCCATG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGTTCAACGGATGGGTTaGCCTCGGAATGTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLVQRMG*PRNVQK
Trigger: TTTCTGAACATTCCGAGGTCAACCCATCCGTTGAAC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTAAGGCCCTCCGCAGTTaGAAGATTTATGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLKALRS*KIYGSE
Trigger: CTCAGAACCATAAATCTTTCAACTGCGGAGGGCCTT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGGTGGGTGGATCACCTaGGGCTGGGAGTGCAAGATC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKGGWIT*GWECKI
Trigger: GATCTTGCACTCCCAGCCTCAGGTGATCCACCCACC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGTGACGTCTTTGTCTaGTTCCAGATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGDVFV*FQMCSL
Trigger: CAAGGAACACATCTGGAAGCAGACAAAGACGTCACC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGGGCTGCTTCTCCACTaGTCAACAGCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPGLLLH*STAPPA
Trigger: TGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATAGGGCATGAGACGTCCTaGCTGTATCAGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIGHETS*LYQSFK
Trigger: TTTGAAAGACTGATACAGGCAGGACGTCTCATGCCC...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAGACGGTATATCTCTaGCTCCAGCTCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQTVYL*LQLPAR
Trigger: CCTCGCAGGGAGCTGGAGGCAGAGATATACCGTCTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACACTTTGGTGGGATGCTaGGGACTTGGTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDTLVGC*GLGAWR
Trigger: CCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKRDTSS*SSQMAW
Trigger: CCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGAAGACCTGGCTCGCTaGCTTCCTGGAGGGACAATC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDEDLAR*LPGGTI
Trigger: GATTGTCCCTCCAGGAAGGCAGCGAGCCAGGTCTTC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGAAGACCTGGCTCGCTaGCTTCCTGGAGGGACAATC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKEDLAR*LPGGTI
Trigger: GATTGTCCCTCCAGGAAGGCAGCGAGCCAGGTCTTC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTTGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLCPWWS*SSQRTV
Trigger: CACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACA...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACTTTCCATCCCGAGCTaGCTGTGGACTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIELSIPS*LWTVLG
Trigger: ACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGGGGACAGGAGACTGTaGCATTGCCTTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPGDRRL*HCLLGP
Trigger: CGGTCCCAAAAGGCAATGGCACAGTCTCCTGTCCCC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGAGCGAGCTTCTCATCTaGCTGGTGGTAGAGCGGACG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKSELLI*LVVERT
Trigger: CGTCCGCTCTACCACCAGGCAGATGAGAAGCTCGCT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGAGCGAGCTTCTCATCTaGCTGGTGGTAGAGCGGACG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPSELLI*LVVERT
Trigger: CGTCCGCTCTACCACCAGGCAGATGAGAAGCTCGCT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACCTGACATCCTAAAATaGCCCACTGACTACCAGTCA +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLPDILK*PTDYQS
Trigger: TGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGGAAAGGCCTCTGCTaGCATAGAAAAGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGKGLC*HRKAGH
Trigger: GTGTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGACTGCTCCAGGACCTTaGCGGGCTGAGTTCAACGGA +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPTAPGP*RAEFNG
Trigger: TCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTGCCCGAGCAACACTaGCTCCAGTTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPLPEQH*LQFCHL
Trigger: CAGATGGCAGAACTGGAGGCAGTGTTGCTCGGGCAA...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGAGCAATTCCACGTGTaGAGCTGCGTATACCATCCA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVEQFHV*SCVYHP
Trigger: TGGATGGTATACGCAGCTGCACACGTGGAATTGCTC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACACCCTGGTGATAGGGTaGGCAGGAGGCGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDTLVIG*AGGVSF
Trigger: AAAGGACACGCCTCCTGCCCACCCTATCACCAGGGT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGGCGTAGCTGGTCAATaGTGTTCTCGGCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPGVAGQ*CSRPQR
Trigger: ACGCTGAGGCCGAGAACACCATTGACCAGCTACGCC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGGCACCATTCCCGTGTaGATGCTGTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKGTIPV*MLWLGW
Trigger: CCAGCCCAACCACAGCATCCACACGGGAATGGTGCC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCAAAGGACTCCACCTTaGCCAGGAACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPQRTPP*PGTGWP
Trigger: AGGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGGCTCTTGCTGGGTCTaGTCTATGTGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACGSCWV*SMCSFS
Trigger: GCTGAAGGAACACATAGACCAGACCCAGCAAGAGCC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTGCCTGGAAACCTGGTaGCTTCATAGATACCATCTT +
Preference number: 4 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPCLETW*LHRYHL
Trigger: AAGATGGTATCTATGAAGCCACCAGGTTTCCAGGCA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCGCTTCCCTCCAGGCTaGTCATACTACTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPRFPPG*SYYFGG
Trigger: CCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCGGGCTGCCCTGGAGTaGCTGGTGCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPRAALE*LVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAATGTGCCATTGCCTTTTaGGACCGCCTTAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIECAIAF*DRLRGQ
Trigger: CTGTCCCCTAAGGCGGTCCCAAAAGGCAATGGCACA...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCATGCTTTTCTCCTCGTaGTGGCCTTCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPMLFSS*WPSLPQ
Trigger: CTGGGGCAGAGAAGGCCACCACGAGGAGAAAAGCAT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCTGTGGGCGGCCACTTaGCAGCTGGTTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPLWAAT*QLVGLR
Trigger: CCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACCACCCATCTGCCTCTaGGCCCCCAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKPPICL*APSEVR
Trigger: TCTGACTTCACTGGGGGCCCAGAGGCAGATGGGTGG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGGCCTGGCAGGTAGCTaGCCACTGATAAACGCCACT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDGLAGS*PLINAT
Trigger: AGTGGCGTTTATCAGTGGCCAGCTACCTGCCAGGCC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGAAAGTTTGTCCCCACTaGCTTGTTCGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVKVCPH*LVRQKP
Trigger: TGGCTTCTGGCGAACAAGCCAGTGGGGACAAACTTT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTCTGCTTCAGCCTCTaGAAAGACAGGCCATTCACT +
Preference number: 4 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLCFSL*KDRPFT
Trigger: AGTGAATGGCCTGTCTTTCCAGAGGCTGAAGCAGAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374075.9
3UTR CAA 72 bp GGACCATGGTGGATGGCATCCTGGGCACTTTGTAGCTaGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: GPWWMASWALCS*SEGKASAAIEK
Trigger: CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGCCATCCACCATGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAGGGAGTGGCTTAGGTaGCGTCTTTGTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEREWLR*RLCLLP
Trigger: TGGAAGCAGACAAAGACGTCACCTAAGCCACTCCCT...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGCAGGTGCGTTGGCTaGTGGAGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLGRCVG*WRQGRA
Trigger: AGCCCTGCCCTGCCTCCATCAGCCAACGCACCTGCC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGCAGCTCCTTGTGCCTaGGTCGGGCCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLAAPCA*VGPGGP
Trigger: AGGACCCCCTGGCCCGACTCAGGCACAAGGAGCTGC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCCACACAGGGGACACTaGAGGGTATCAGCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPPHRGH*RVSAGG
Trigger: GCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCTTGGGGCTGGGAGTTaGAGATGCTTTTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPLGAGS*RCFSPR
Trigger: ACGAGGAGAAAAGCATCTTCAACTCCCAGCCCCAAG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCTCACAGCACCTCTGTaGGGGGACTGGTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPLTAPL*GDWCSW
Trigger: CCAGGAGCACCAGTCCCCTCACAGAGGTGCTGTGAG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACATGGCCTTCCAAGCTaGGACCAGCCTCATACCCCA +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKHGLPS*DQPHTP
Trigger: TGGGGTATGAGGCTGGTCTCAGCTTGGAAGGCCATG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCCAGGGGACCTGCCTGTaGATTCTTTGTTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPQGTCL*ILCSKP
Trigger: GGGTTTGGAACAAAGAATTCACAGGCAGGTCCCCTG...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDVLCQG*FSTAQQ
Trigger: CTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGAC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGACTACTTTGGTGGGATaGTGCGGACTTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPTTLVG*CGLGAW
Trigger: CCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTAACCGCCATCTCGGCTaGCAGTGTCCGCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPNRHLG*QCPLQA
Trigger: AGCCTGGAGCGGACACTGGCAGCCGAGATGGCGGTT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTCTCTGTGGATTTACTaGCATAATGGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSLWIY*HNGSPR
Trigger: CCTGGGGCTCCCATTATGGCAGTAAATCCACAGAGA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTTTCCATCCCGAGCTaGCTGTGGACTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLSIPS*LWTVLG
Trigger: ACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACTGGCCATCCAGCACTaGCCACCCCTCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKLAIQH*PPLSFH
Trigger: ATGGAAAGAGAGGGGTGGGCAGTGCTGGATGGCCAG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGCCTGCTTGCTCCTCTaGTTGGGGCTGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKACLLL*LGLGVE
Trigger: TTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCAGGC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTTCGAGCTGGATGGAGTaGCGGTGTCTCCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPSSWME*RCLRAG
Trigger: ACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGA...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAAGGGGCGGCAGGTGCTaGTGGGCCAGGCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVRGGRC*WARRKS
Trigger: GGACTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCT...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATCCAGGGGCGGCAGGTaGTGCTGGGCCAGGCGGAAG +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVSRGGR*CWARRK
Trigger: CTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCTGGA...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACAGGCTCATGGGAACTTaGTGGGCTGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDRLMGT*WAVHIL
Trigger: GAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCACTGCCTCCAGTTCTaGCATCTGGGCTTAGGAGGT +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKHCLQF*HLGLGG
Trigger: ACCTCCTAAGCCCAGATGGCAGAACTGGAGGCAGTG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTCCCTAAATGGCAGGTaGTGTTTGCTACTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPSLNGR*CLLLKV
Trigger: TACTTTCAGTAGCAAACAGCACCTGCCATTTAGGGA...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGAGCAATTCCACGTGTaGAGCTGCGTATACCATCCA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKREQFHV*SCVYHP
Trigger: TGGATGGTATACGCAGCTGCACACGTGGAATTGCTC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCCTGCCGCGTTGGCCTaGGCTGGGGATTCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFPAALA*AGDSGG
Trigger: GCCCCCTGAATCCCCAGCCCAGGCCAACGCGGCAGG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAACCCTGGTGATAGGGTaGGCAGGAGGCGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKTLVIG*AGGVSF
Trigger: AAAGGACACGCCTCCTGCCCACCCTATCACCAGGGT...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAATGCAGAGCGGGGCTGTaGGATGGTGAAGGACAAGAC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKCRAGL*DGEGQD
Trigger: GTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCA...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGGCTCAGGCTCTTGCTaGGTCTGGTCTATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPGSGSC*VWSMCS
Trigger: GGAACACATAGACCAGACCCAGCAAGAGCCTGAGCC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTAGCAGGCAGGTGCGTTaGCTGATGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPSRQVR*LMEAGQ
Trigger: CTGCCCTGCCTCCATCAGCCAACGCACCTGCCTGCT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLHRALP*EDPGGL
Trigger: GAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCTGCCTGGAAACCTGGTaGCTTCATAGATACCATCTT +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPCLETW*LHRYHL
Trigger: AAGATGGTATCTATGAAGCCACCAGGTTTCCAGGCA...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATATGCCTGGAAACCTGGTaGCTTCATAGATACCATCTT +
Preference number: 4 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPICLETW*LHRYHL
Trigger: AAGATGGTATCTATGAAGCCACCAGGTTTCCAGGCA...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGTGCGGACTTGGTGCCTaGAGGGTGGGGTGGCACGCC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLCGLGA*RVGWHA
Trigger: GGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCA...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCGCTTCCCTCCAGGCTaGTCATACTACTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKRFPPG*SYYFGG
Trigger: CCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCGCTTCCCTCCAGGCTaGTCATACTACTTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPRFPPG*SYYFGG
Trigger: CCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGATGCAGCAAAGGGCTaGGCTAATGTTCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEDAAKG*ANVPAV
Trigger: CACAGCAGGAACATTAGCCCAGCCCTTTGCTGCATC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGAGGAAGCTCCATCCCTaGGCACAGATGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKRKLHP*AQMQQR
Trigger: CCTTTGCTGCATCTGTGCCCAGGGATGGAGCTTCCT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGAATCAGAGAACCCCTaGCCTTGGGGTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPESENP*PWGRKL
Trigger: GAGCTTCCTACCCCAAGGCCAGGGGTTCTCTGATTC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCTCTGTGGCTCTTCTaGGAATCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKALWLF*ESENPW
Trigger: CCAGGGGTTCTCTGATTCCCAGAAGAGCCACAGAGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTAGCTCACAGATGGCCTaGTCTCGCCCTGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPSSQMA*SRPALV
Trigger: CACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCTTGCAGCTCACAGATaGCCTGGTCTCGCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPLAAHR*PGLALP
Trigger: GGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCTGCCCTGGAGTGGCTaGTGCAGGCTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPLPWSG*CRLSSS
Trigger: GCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACATCCCGAGCTGCCTGTaGACTGTCCTTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDIPSCL*TVLGGL
Trigger: AAGACCACCAAGGACAGTCCACAGGCAGCTCGGGAT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATTAGGGGACAGAACATaGTATTCGTGGCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLLGDRT*YSWPVY
Trigger: ATACACAGGCCACGAATACCATGTTCTGTCCCCTAA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACATGCTTTTCTCCTCGTaGTGGCCTTCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDMLFSS*WPSLPQ
Trigger: CTGGGGCAGAGAAGGCCACCACGAGGAGAAAAGCAT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTCCTCTGCTTGGGGCTaGGAGTTGAAGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSSAWG*ELKMLF
Trigger: GAAAAGCATCTTCAACTCCCAGCCCCAAGCAGAGGA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGTGGGGGAGAGGCTGTaGGCGGCCACTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLVGERL*AATWQL
Trigger: CAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCAC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGGGGACTGGTGCTCCTaGGAAGTCACTTCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPGDWCS*EVTSLG
Trigger: ACCAAGAGAAGTGACTTCCCAGGAGCACCAGTCCCC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 4 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCACTGATAAACGCCACTaGGATCCTAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACTDKRH*DPRRSW
Trigger: CCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGGCGGCCTGGCCTCATaGCCGCAGACCGTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVGGLAS*PQTVPQ
Trigger: CTGGGGCACGGTCTGCGGCCATGAGGCCAGGCCGCC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGTGCGGGAGGCGGCCTaGCCTCATGGCCGCAGACCG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERVREAA*PHGRRP
Trigger: CGGTCTGCGGCCATGAGGCCAGGCCGCCTCCCGCAC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTCATGGGAACTTGCTaGGCTGTCCACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKLMGTC*AVHILC
Trigger: GCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGAGTCCTGGAATTCCATaGGGGTTGCCCGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKSPGIP*GLPEQH
Trigger: GTGTTGCTCGGGCAACCCCCATGGAATTCCAGGACT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGAGTCCTGGAATTCCATaGGGGTTGCCCGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPSPGIP*GLPEQH
Trigger: GTGTTGCTCGGGCAACCCCCATGGAATTCCAGGACT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGGAGCTGAGGAGTCCTaGAATTCCATGGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKGAEES*NSMGVA
Trigger: GGCAACCCCCATGGAATTCCAGGACTCCTCAGCTCC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGAGGGCAGAAGAATCTaGTCGTTTCTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACEGRRI*SFLSSI
Trigger: GATGGAGGAGAGAAACGACCAGATTCTTCTGCCCTC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGGGAAAGGGCTTGGCTaGGCATCAAACCTACCACCC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKGKGLG*ASNLPP
Trigger: GGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGACAAGGTGGATGGGGTaGGGAGAGTTCAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKTRWMG*GEFRHV
Trigger: CACATGCCTGAACTCTCCCCACCCCATCCACCTTGT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGACAAGGTGGATGGGGTaGGGAGAGTTCAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPTRWMG*GEFRHV
Trigger: CACATGCCTGAACTCTCCCCACCCCATCCACCTTGT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCAGACAAATACAAGGTaGATGGGGTGGGGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRQTNTR*MGWGEF
Trigger: GAACTCTCCCCACCCCATCCACCTTGTATTTGTCTG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAATCCCCGCCCCTGCCGTaGTTGAGGCCGCCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQSPPLP*LRPPRL
Trigger: GAGGCGAGGCGGCCTCAACCACGGCAGGGGCGGGGA...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGCAGCTCCTTGTGCCTaGGTCGGGCCAGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFAAPCA*VGPGGP
Trigger: AGGACCCCCTGGCCCGACTCAGGCACAAGGAGCTGC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCAACTCTGCTTGTTTCTaGGCCCACAAAGCCACTGTC +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPNSACF*AHKATV
Trigger: GACAGTGGCTTTGTGGGCTCAGAAACAAGCAGAGTT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCTTGGGGCTGGGAGTTaGAGATGCTTTTCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPLGAGS*RCFSPR
Trigger: ACGAGGAGAAAAGCATCTTCAACTCCCAGCCCCAAG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAGGTGGATAAGGCATaGTGGGAACCGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQVDKA*WEPRRC
Trigger: ACATCTCCTCGGTTCCCATCATGCCTTATCCACCTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCAGGTGGATAAGGCATaGTGGGAACCGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPQVDKA*WEPRRC
Trigger: ACATCTCCTCGGTTCCCATCATGCCTTATCCACCTG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCTAAAATGCCCCACTaGCTACCAGTCACTAGGAGA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPKMPH*LPVTRR
Trigger: TCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGTCAGTCATGTCCAGCTaGCGGCCCTGCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLSVMSS*RPCWGS
Trigger: GCTCCCCCAGCAGGGCCGTCAGCTGGACATGACTGA...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGGGCATGAGACGTCCTaGCTGTATCAGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACGHETS*LYQSFK
Trigger: TTTGAAAGACTGATACAGGCAGGACGTCTCATGCCC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTCAGAAATCCGTTTGTaGCCCTCAAACTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSEIRL*PSNSEP
Trigger: TGGCTCAGAGTTTGAGGGGCACAAACGGATTTCTGA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLPWSGW*RLSSSR
Trigger: GCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLAEVCC*HGVGVR
Trigger: CCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCACACATTCCAGAAATaGAGAGGTATGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRHTFQK*RGMLLP
Trigger: TGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGCTCACTGTCCCACTaGTCCAGGACCTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLGSLSH*SRTLPG
Trigger: GCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTACGGCCATCCTGCCTGTaGCCTCTCTCGGGCTCCACC +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVRPSCL*PLSGST
Trigger: GGTGGAGCCCGAGAGAGGGCACAGGCAGGATGGCCG...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTTGGCCAGGAACTGGCTaGCCTGAGAAGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPWPGTG*PEKPVP
Trigger: AGGCACTGGCTTCTCAGGCCAGCCAGTTCCTGGCCA...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNISSRAA*AAFSRW
Trigger: CCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGA...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGGCTCTTGCTGGGTCTaGTCTATGTGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDGSCWV*SMCSFS
Trigger: GCTGAAGGAACACATAGACCAGACCCAGCAAGAGCC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACCTCCTCCATTCTCATaGCTTCTGGGAGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEPPPFS*LLGETS
Trigger: TGAAGTCTCTCCCAGAAGCCATGAGAATGGAGGAGG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTATACCATCTTCTCCGTaGCCTCCTCCAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPIPSSP*PPPGEP
Trigger: GGGCTCCCCTGGAGGAGGCCACGGAGAAGATGGTAT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACTGGTCATACTACTTTaGTGGGATGCTGCGGACTTG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIELVILL*WDAADL
Trigger: CAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGAATCAGAGAACCCCTaGCCTTGGGGTAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKESENP*PWGRKL
Trigger: GAGCTTCCTACCCCAAGGCCAGGGGTTCTCTGATTC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGCGGGGGCTGGGGGTaGGCTGATTGTCTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLGGGWG*ADCLVG
Trigger: CCCAACAAGACAATCAGCCCACCCCCAGCCCCCGCC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCGGGCTGCCCTGGAGTaGCTGGTGCAGGCTGTCTTC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLRAALE*LVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACAGGCAATCTCTCTGTaGATTTACTGCCATAATGGG +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPQAISL*IYCHNG
Trigger: CCCATTATGGCAGTAAATCCACAGAGAGATTGCCTG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGTGGACTGTCCTTGGTaGTCTTGCTCTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPVDCPW*SCSSQR
Trigger: TCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCAC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPVDCP*WSCSSQ
Trigger: CTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATTAGGGGACAGAACATaGTATTCGTGGCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPLGDRT*YSWPVY
Trigger: ATACACAGGCCACGAATACCATGTTCTGTCCCCTAA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAATCCTCTGCTTGGGGCTaGGAGTTGAAGATGCTTTTC +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIESSAWG*ELKMLF
Trigger: GAAAAGCATCTTCAACTCCCAGCCCCAAGCAGAGGA...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLKGWRG*CWGRCC
Trigger: GCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTT...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGTACACAGCGGCAGGTaGATAAGGCATGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDVHSGR*IRHDGN
Trigger: GTTCCCATCATGCCTTATCCACCTGCCGCTGTGTAC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGTACACAGCGGCAGGTaGATAAGGCATGATGGGAAC +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPVHSGR*IRHDGN
Trigger: GTTCCCATCATGCCTTATCCACCTGCCGCTGTGTAC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGGACACATGTCACCCTaGGGCCCTGACATCCTAAAA +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKGHMSP*GPDILK
Trigger: TTTTAGGATGTCAGGGCCCCAGGGTGACATGTGTCC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAATCGGGCTGCGGGTGTaGGTCCCACTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTIGLRV*VPLQGR
Trigger: CCGCCCCTGGAGTGGGACCCACACCCGCAGCCCGAT...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGCATGCTGCGGACTCTaGGCTGGGGGAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLACCGL*AGGAEE
Trigger: CTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCTTGGTCCTGGGGCATaGGACGTCCTGCCTGTATCA +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPLGPGA*DVLPVS
Trigger: TGATACAGGCAGGACGTCTCATGCCCCAGGACCAAG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCAGGGCAGGAGGTCTTaGTGGCTGGCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLQGRRS*WLAWGL
Trigger: AAGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGGCTGGGGGTGGGCTaGTTGTCTTGTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLGLGVG*LSCWEG
Trigger: CCCTTCCCAACAAGACAATCAGCCCACCCCCAGCCC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCACACAGGGGACACTaGAGGGTATCAGCGGGAGGC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLPHRGH*RVSAGG
Trigger: GCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCTGGGCCCCCAGTaGAGTCAGAAGAGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLPLGPQ*SQKRQE
Trigger: CTCCTGCCTCTTCTGACTTCACTGGGGGCCCAGAGG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTTCAGTCATGTCCAGCTaGCGGCCCTGCTGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNISVMSS*RPCWGS
Trigger: GCTCCCCCAGCAGGGCCGTCAGCTGGACATGACTGA...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCATGGCCTTCCAAGCTaGGACCAGCCTCATACCCCA +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPHGLPS*DQPHTP
Trigger: TGGGGTATGAGGCTGGTCTCAGCTTGGAAGGCCATG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAAGATTTATGGTTCTaGGATAGGCAAAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: PVTRRKVSGYALPSDACPKDLWF*DRQRGK
Trigger: TTTCCCCCTTTGCCTATCTCAGAACCATAAATCTTT...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGCCAGTGCCTGGGTCTaGTCTGCTGAGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLASAWV*SAEDWS
Trigger: GGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGCGGCTCAGGCTCTTaGTGGGTCTGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPGGSGS*WVWSMC
Trigger: ACACATAGACCAGACCCAGCAAGAGCCTGAGCCGCC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGCCTGCACCGGGCACTaGCTTGGGAGGACCCTGGTG +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQACTGH*LGRTLV
Trigger: CACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLGPPPR*KGFCGR
Trigger: CCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGCCTGCTTGCTCCTCTaGTTGGGGCTGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPACLLL*LGLGVE
Trigger: TTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCAGGC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGCGACGACCCCGCCTaGTTGCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGDDPA*LLLCLG
Trigger: CCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTCGCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGCGACGACCCCGCCTaGTTGCTCCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGDDPA*LLLCLG
Trigger: CCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTCGCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCATCTATCTGTGGCATaGTGCGGACTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPHLSVA*CGLWAG
Trigger: CCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGCCCCCTGTCTCCATTaGGCCCTGGCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQAPCLH*ALAHLQ
Trigger: CTGGAGGTGGGCCAGGGCGCAATGGAGACAGGGGGC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAAGCGGCCAGCCAGAGTaGCTCCCTGTCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQSGQPE*LPVWAA
Trigger: CGCTGCCCAGACAGGGAGCCACTCTGGCTGGCCGCT...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCTGCACAATCTCAGCTaGAGACTTGAAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDLHNLS*RLEDEG
Trigger: CCCCTCATCTTCAAGTCTCCAGCTGAGATTGTGCAG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGA +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQEPASG*AGCCSR
Trigger: TCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCCTCCTCCATTCTCATaGCTTCTGGGAGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKPPPFS*LLGETS
Trigger: TGAAGTCTCTCCCAGAAGCCATGAGAATGGAGGAGG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAACACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQHRALP*EDPGGL
Trigger: GAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTG...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGATTGGTGCCTGGAGGGTaGGGTGGCACGCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLVPGG*GGTPGP
Trigger: AGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAA...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGTCATACTACTTTGGTaGGATGCTGCGGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPVILLW*DAADLV
Trigger: CACCAAGTCCGCAGCATCCCACCAAAGTAGTATGAC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCRVGLP*SGWCRL
Trigger: CAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCAGGCAATCTCTCTGTaGATTTACTGCCATAATGGG +
Preference number: 4 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRQAISL*IYCHNG
Trigger: CCCATTATGGCAGTAAATCCACAGAGAGATTGCCTG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGCTCGCTGCCTTCCTaGAGGGACAATCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPGSLPS*RDNLLF
Trigger: GAAGAGCAGATTGTCCCTCCAGGAAGGCAGCGAGCC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGTGGACTGTCCTTGGTaGTCTTGCTCTTCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKVDCPW*SCSSQR
Trigger: TCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCAC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGRRSQ*VPCDST
Trigger: GGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGATGTAGGCAAAGGCTaGAGGGGCTGGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLDVGKG*RGWCWG
Trigger: CCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGTGGGGGAGAGGCTGTaGGCGGCCACTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCVGERL*AATWQL
Trigger: CAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCAC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGACACCCCCTCCACTTaGAAAGCACAGGGACTGAGC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPDTPST*KAQGLS
Trigger: GCTCAGTCCCTGTGCTTTCCAAGTGGAGGGGGTGTC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 4 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGACTGATAAACGCCACTaGGATCCTAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPTDKRH*DPRRSW
Trigger: CCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGACTGATAAACGCCACTaGGATCCTAGGAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKTDKRH*DPRRSW
Trigger: CCAGCTTCTCCTAGGATCCCAGTGGCGTTTATCAGT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACGGGGCTGGTGGCATTaGGAAAGAGTCTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKRGWWH*ERVSLL
Trigger: AAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGAGCTCGGGGCTGGTaGCATTGGGAAAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPGARGW*HWERVS
Trigger: AGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGCTGAGTTCAACGGATaGGTTGACCTCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDAEFNG*VDLGMF
Trigger: GAACATTCCGAGGTCAACCCATCCGTTGAACTCAGC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAGTGGCTGGGGCCCTCTaGCAAGGTTTCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVVAGAL*QGFCQG
Trigger: GCCCTGGCAGAAACCTTGCCAGAGGGCCCCAGCCAC...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAGGGCTTAGGAGGTGGTaGCTGGGGCCCTCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVGLRRW*LGPSGK
Trigger: CTTGCCAGAGGGCCCCAGCCACCACCTCCTAAGCCC...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTGCATGCTGCGGACTCTaGGCTGGGGGAGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIACCGL*AGGAEE
Trigger: CTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGC...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGAGGGCAGAAGAATCTaGTCGTTTCTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKEGRRI*SFLSSI
Trigger: GATGGAGGAGAGAAACGACCAGATTCTTCTGCCCTC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACAAATACAAGGTGGATaGGGTGGGGAGAGTTCAGGC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKQIQGG*GGESSG
Trigger: GCCTGAACTCTCCCCACCCCATCCACCTTGTATTTG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPPQRTW*GACGSL
Trigger: AAGACTACCACAGGCTCCTCACCAAGTACGCTGAGG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCACCTCCCGAGGCACTaGGGAAGACCTGGCTCGCTG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCHLPRH*GRPGSL
Trigger: CAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACCAGTGGGTCCCCTGTaGCAGCACCACCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERPVGPL*QHHPHP
Trigger: AGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGATGCTTGCCCCAGAGTaGCTGGTCACAGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLMLAPE*LVTGGG
Trigger: TCCCCCACCTGTGACCAGTCACTCTGGGGCAAGCAT...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAACCTGACTCGGAATCCTaGTGCCCATCGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQPDSES*CPSGCG
Trigger: CCCGCAGCCCGATGGGCATCAGGATTCCGAGTCAGG...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGTTCAACGGATGGGTTaGCCTCGGAATGTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDVQRMG*PRNVQK
Trigger: TTTCTGAACATTCCGAGGTCAACCCATCCGTTGAAC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGACCCTGGTGGCCTCTaGTTTCCCTGGAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLDPGGL*FPWSCS
Trigger: GCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGGCTGCCTCAGCCTTaGCCAGGCCTGACATGTGCC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGLPQP*PGLTCA
Trigger: GGCACATGTCAGGCCTGGGCAAGGCTGAGGCAGCCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTACTACTTTGGTGGGATaGTGCGGACTTGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPTTLVG*CGLGAW
Trigger: CCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGCCTGGTCTCGCCCTaGCCTGGTGAGCAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGLVSP*PGEQEA
Trigger: AGCTTCCTGCTCACCAGGGCAGGGCGAGACCAGGCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAGCAGGCGGGACCTGTaGTGGAGGGAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERSRRDL*WRETLL
Trigger: CAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGCAGAGGTATGCTGCTaGCACGGGGTAGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCAEVCC*HGVGVR
Trigger: CCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCACACATTCCAGAAATaGAGAGGTATGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SWALCSLSEGKASAAIEKHTFQK*RGMLLP
Trigger: TGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTG...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAGGCTCACTGTCCCACTaGTCCAGGACCTTGCCGGGC +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTGSLSH*SRTLPG
Trigger: GCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCC...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAGCTCCACCACCGTCCTaGCGACCCAGTTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVAPPPS*RPSFRG
Trigger: TCCCCTGAAACTGGGTCGGCAGGACGGTGGTGGAGC...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACACCAAGATGCCAAGTaGCAGGGCCAGGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERHQDAK*QGQGCP
Trigger: GGGGCAGCCCTGGCCCTGCCACTTGGCATCTTGGTG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000223791.7
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTTGGAAGCCCTTGACTTaGTCCTGGGGCATGAGACGT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPWKPLT*SWGMRR
Trigger: ACGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCA...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGCAGCCTTCAGCCGCTaGAAGCCCTTGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLAAFSR*KPLTWS
Trigger: GGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGMLRT*CLEGGV
Trigger: CACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGCCACTGTCTGTCTCTaGGGACGCCATCCAGGTCTC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLATVCL*GRHPGL
Trigger: GAGACCTGGATGGCGTCCCCAGAGACAGACAGTGGC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTAGGAAGCTCCATCCCTaGGCACAGATGCAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPRKLHP*AQMQQR
Trigger: CCTTTGCTGCATCTGTGCCCAGGGATGGAGCTTCCT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAACAGGCAATCTCTCTGTaGATTTACTGCCATAATGGG +
Preference number: 4 (lower is better)
Translates to: ASWALCSLSEGKASAAIEQAISL*IYCHNG
Trigger: CCCATTATGGCAGTAAATCCACAGAGAGATTGCCTG...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLALRKT*LAAFLE
Trigger: CTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTATCCCGAGCTGCCTGTaGACTGTCCTTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPIPSCL*TVLGGL
Trigger: AAGACCACCAAGGACAGTCCACAGGCAGCTCGGGAT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTATGCTTTTCTCCTCGTaGTGGCCTTCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPMLFSS*WPSLPQ
Trigger: CTGGGGCAGAGAAGGCCACCACGAGGAGAAAAGCAT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGCTTGCTCCTCTGCTTaGGGCTGGGAGTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPACSSA*GWELKM
Trigger: CATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGTGGGCGGCCACTTaGCAGCTGGTTGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLWAAT*QLVGLR
Trigger: CCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAGGCGGGACCTGTGCTaGAGGGAGACCCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERRRDLC*RETLLV
Trigger: CACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGCTGAGTTCAACGGATaGGTTGACCTCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKAEFNG*VDLGMF
Trigger: GAACATTCCGAGGTCAACCCATCCGTTGAACTCAGC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTAGGGAGTGGCTTAGGTaGCGTCTTTGTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPREWLR*RLCLLP
Trigger: TGGAAGCAGACAAAGACGTCACCTAAGCCACTCCCT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCTTGGTCCTGGGGCATaGGACGTCCTGCCTGTATCA +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLLGPGA*DVLPVS
Trigger: TGATACAGGCAGGACGTCTCATGCCCCAGGACCAAG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGGCAGGTGCGTTGGCTaGTGGAGGCAGGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTGRCVG*WRQGRA
Trigger: AGCCCTGCCCTGCCTCCATCAGCCAACGCACCTGCC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACACAGGGCAGGAGGTCTTaGTGGCTGGCATGGGGGCTT +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTQGRRS*WLAWGL
Trigger: AAGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTG...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCAGCCTTGCCCAGGCCTaGCATGTGCCCGTCTCTAGC +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCSLAQA*HVPVSS
Trigger: GCTAGAGACGGGCACATGTCAGGCCTGGGCAAGGCT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGGGCTGGGGGTGGGCTaGTTGTCTTGTTGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVGLGVG*LSCWEG
Trigger: CCCTTCCCAACAAGACAATCAGCCCACCCCCAGCCC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCA +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVGSGPC*APLGRP
Trigger: TGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGGAGACCCTCCTGGTaGGGAACTATGCGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGRPSW*GTMRAF
Trigger: GAAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTACTGGGCTGGGGGAGCTaGGGAGTCCTGGAATTCCAT +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVLGWGS*GVLEFH
Trigger: ATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAG...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGCAGGAAAGGCTCAGTaGCTTACTCCAGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFAGKAQ*LTPGEP
Trigger: GGGCTCCCCTGGAGTAAGTCACTGAGCCTTTCCTGC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCTCAACAGCACCTCCTaGACAATCTCAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPLNSTS*TISAGD
Trigger: GTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCATTCCCGTGTGGATaGTGTGGTTGGGCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIPFPCG*CGWAGV
Trigger: CACCCCAGCCCAACCACAGCATCCACACGGGAATGG...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTARPPL*RAGLWD
Trigger: ATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAGCCAGTGCCTGGGTCTaGTCTGCTGAGGACTGGTCC +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTASAWV*SAEDWS
Trigger: GGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGC...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAATCTGCAGCTCCTTGTaGCTGAGTCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVICSSL*LSRARG
Trigger: CCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGAT...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGACCCTGGTGGCCTCTaGTTTCCCTGGAGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFDPGGL*FPWSCS
Trigger: GCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGACTTTGGTGGGATGCTaGGGACTTGGTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLTLVGC*GLGAWR
Trigger: CCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGT...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERKLGAL*RRGPLG
Trigger: CCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAATGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKCPWWS*SSQRTV
Trigger: CACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACA...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTCGAGCTGGATGGAGTaGCGGTGTCTCCGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCSSWME*RCLRAG
Trigger: ACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGA...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGAATTCCATGGGGGTTaGCCGAGCAACACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLEFHGG*PSNTAS
Trigger: GGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAACCTCCAGGCCGTTCTaGCAGCCCAAGCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQTSRPF*QPKLLL
Trigger: GAGCAGCAGCTTGGGCTGGCAGAACGGCCTGGAGGT...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACCAGCATCGGCCATCCTaGCTGTGCCCTCTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHQHRPS*LCPLSG
Trigger: GCCCGAGAGAGGGCACAGGCAGGATGGCCGATGCTG...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVAPRRS*SMVFSA
Trigger: GGCCGAGAACACCATTGACCAGCTACGCCTCGGGGC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTGGCACCATTCCCGTGTaGATGCTGTGGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIGTIPV*MLWLGW
Trigger: CCAGCCCAACCACAGCATCCACACGGGAATGGTGCC...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCTGGCCAGGAACTGGCTaGCCTGAGAAGCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFWPGTG*PEKPVP
Trigger: AGGCACTGGCTTCTCAGGCCAGCCAGTTCCTGGCCA...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTTTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTFQASP*SRQAAG
Trigger: CCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAA...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCAGCAGGCAGGTGCGTTaGCTGATGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCSRQVR*LMEAGQ
Trigger: CTGCCCTGCCTCCATCAGCCAACGCACCTGCCTGCT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACATTCTCATGGCTTCTaGGAGAGACTTCACACTGAG +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKHSHGF*ERLHTE
Trigger: CTCAGTGTGAAGTCTCTCCCAGAAGCCATGAGAATG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQALGGP*WPLLSL
Trigger: CAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGATGCAGCAAAGGGCTaGGCTAATGTTCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPDAAKG*ANVPAV
Trigger: CACAGCAGGAACATTAGCCCAGCCCTTTGCTGCATC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAGGTACCTCTGTGCTTaGCTCCGGGGTGTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERRYLCA*LRGVLG
Trigger: GCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCCTGGAGTGGCTaGTGCAGGCTGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLPWSG*CRLSSS
Trigger: GCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCVKGRC*ACRAAL
Trigger: CAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGAC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGTGGACCATCTGCCTCTaGGGGAGACCCAACTTGACC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLWTICL*GRPNLT
Trigger: GGTCAAGTTGGGTCTCCCCCAGAGGCAGATGGTCCA...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGCTGGCCATTGGGGCTaGCCTGGGCTTCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTAGHWG*PGLHLG
Trigger: GCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACATCTCAGTCTCCGAGCTaGCCATTGGGGCTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTSQSPS*PLGLAW
Trigger: CCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGA...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGAAAGAAAGGAGCACTaGAGAGTCCAGGTGCATACT +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKERKEH*RVQVHT
Trigger: AGTATGCACCTGGACTCTCCAGTGCTCCTTTCTTTC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGATGGCCCCTGGACTCCTaGGTGAGTATCCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERWPLDS*VSIPWC
Trigger: GCACCAGGGGATACTCACCCAGGAGTCCAGGGGCCA...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCTTGCAGCTCACAGATaGCCTGGCTGGTGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCLAAHR*PGWWPL
Trigger: CAGGGGCCACCAGCCAGGCCATCTGTGAGCTGCAAG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374079.8
CDS-3UTR TCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTACTGGGTCTGCTCTGCTaGGGACTGGTCCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVLGLLC*GLVLRD
Trigger: ATCTCTGAGGACCAGTCCTCAGCAGAGCAGACCCAG...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCTTGGTCCTGGGGCATaGGACGTCCTGCCTGTATCA +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNILGPGA*DVLPVS
Trigger: TGATACAGGCAGGACGTCTCATGCCCCAGGACCAAG...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCTCATACCCCAACCTTaGGGAGCTCTCTCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNILIPQP*GALSSL
Trigger: GAGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAG...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCATGGCCTTCCAAGCTaGGACCAGCCTCATACCCCA +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIHGLPS*DQPHTP
Trigger: TGGGGTATGAGGCTGGTCTCAGCTTGGAAGGCCATG...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTACCTGGTGAGGAACTATaGGGGCCTTCTGGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVPGEEL*GPSGPQ
Trigger: CTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGG...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGACTGCCTGAGGTTCTaGCTGGACCGAAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVDCLRF*LDRRRP
Trigger: AGGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTACTGCTCCAGGACCTTaGCGGGCTGAGTTCAACGGA +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNITAPGP*RAEFNG
Trigger: TCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGT...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTACATCTATCTGTGGCATaGTGCGGACTCTGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVHLSVA*CGLWAG
Trigger: CCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATG...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGTCCCTAAATGGCAGGTaGTGTTTGCTACTGAAAGTA +
Preference number: 4 (lower is better)
Translates to: PDILKCPTDYQSLGERSPSLNGR*CLLLKV
Trigger: TACTTTCAGTAGCAAACAGCACCTGCCATTTAGGGA...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAAAGACCTTGGTCCCCTaGGGCACCATTCCCGTGTGG +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTKTLVP*GTIPVW
Trigger: CCACACGGGAATGGTGCCCCAGGGGACCAAGGTCTT...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACAGCAGGCAGGTGCGTTaGCTGATGGAGGCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHSRQVR*LMEAGQ
Trigger: CTGCCCTGCCTCCATCAGCCAACGCACCTGCCTGCT...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCACATTTACGTGCAATaGGCAGGGGCCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFHIYVQ*AGASAG
Trigger: GCCAGCACTGGCCCCTGCCCATTGCACGTAAATGTG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGCCTCTGCTTTCCCTaGAGTTGCAGCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGLCFP*SCSHPI
Trigger: GATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGGCCTCTGCTTTCCCTaGAGTTGCAGCCACCCCATC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQGLCFP*SCSHPI
Trigger: GATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGTCATACTACTTTGGTaGGATGCTGCGGACTTGGTG +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPVILLW*DAADLV
Trigger: CACCAAGTCCGCAGCATCCCACCAAAGTAGTATGAC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGAAGGTGACCCTGTCTaGCCATCCAGCACTGCCCAC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQEREGDPV*PSSTAH
Trigger: GTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTCTCTGCCCCAGAGGTaGCTGAGCCTGGACCATCTG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCSLPQR*LSLDHL
Trigger: CAGATGGTCCAGGCTCAGCCACCTCTGGGGCAGAGA...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTACCACCCATCTGCCTCTaGGCCCCCAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVPPICL*APSEVR
Trigger: TCTGACTTCACTGGGGGCCCAGAGGCAGATGGGTGG...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCCACCCATCTGCCTCTaGGCCCCCAGTGAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCPPICL*APSEVR
Trigger: TCTGACTTCACTGGGGGCCCAGAGGCAGATGGGTGG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCATACCTATTATTAGCTaGAGTTGCACACATGCAGGA +
Preference number: 4 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPIPIIS*SCTHAG
Trigger: TCCTGCATGTGTGCAACTCCAGCTAATAATAGGTAT...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGGAGCTCGGGGCTGGTaGCATTGGGAAAGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFGARGW*HWERVS
Trigger: AGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCTAGGAGCTCGGGGCTaGTGGCATTGGGAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNILGARG*WHWERV
Trigger: GACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAG...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTAAAGTTTGTCCCCACTaGCTTGTTCGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPKVCPH*LVRQKP
Trigger: TGGCTTCTGGCGAACAAGCCAGTGGGGACAAACTTT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTTTAGGAGGTGGTGGCTaGGGCCCTCTGGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNILGGGG*GPLARF
Trigger: AAACCTTGCCAGAGGGCCCCAGCCACCACCTCCTAA...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGTCCTCCATCTATCTGTaGCATGCTGCGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLSSIYL*HAADSG
Trigger: CCCAGAGTCCGCAGCATGCCACAGATAGATGGAGGA...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTACACTATCACCCAGGCTaGAGTGCAGTGGCCCGATCT +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVHYHPG*SAVARS
Trigger: AGATCGGGCCACTGCACTCCAGCCTGGGTGATAGTG...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTACCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVPQRTW*GACGSL
Trigger: AAGACTACCACAGGCTCCTCACCAAGTACGCTGAGG...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACGGGGCTGTGGGATGGTaGAGGACAAGACCTTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHGAVGW*RTRPWS
Trigger: GGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCC...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCTGGGTCTGCTCTGCTaGGGACTGGTCCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCLGLLC*GLVLRD
Trigger: ATCTCTGAGGACCAGTCCTCAGCAGAGCAGACCCAG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGTCTGCTCTGCTaGGGACTGGTCCTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLGLLC*GLVLRD
Trigger: ATCTCTGAGGACCAGTCCTCAGCAGAGCAGACCCAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTTGGTCCTGGGGCATaGGACGTCCTGCCTGTATCA +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLGPGA*DVLPVS
Trigger: TGATACAGGCAGGACGTCTCATGCCCCAGGACCAAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCAGGTGGATAAGGCATaGTGGGAACCGAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLQVDKA*WEPRRC
Trigger: ACATCTCCTCGGTTCCCATCATGCCTTATCCACCTG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCCATGCGTGAGGTACTaGAGGGGACCATGGTGGATG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCPCVRY*RGPWWM
Trigger: CATCCACCATGGTCCCCTTCAGTACCTCACGCATGG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR TCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATCCCGAAGTCTCTCCTaGCTCGGAATCCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVSRSLS*LGILMP
Trigger: GGGCATCAGGATTCCGAGTCAGGAGAGACTTCGGGA...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAATCCCGAAGTCTCTCCTaGCTCGGAATCCTGATGCCC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQSRSLS*LGILMP
Trigger: GGGCATCAGGATTCCGAGTCAGGAGAGACTTCGGGA...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCTGCCTCCAGCTCCCTaGGAGGATCAAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFLPPAP*EDQIFQ
Trigger: CTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAACAGACGGTATATCTCTaGCTCCAGCTCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQQTVYL*LQLPAR
Trigger: CCTCGCAGGGAGCTGGAGGCAGAGATATACCGTCTG...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACAGACGGTATATCTCTaGCTCCAGCTCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERQTVYL*LQLPAR
Trigger: CCTCGCAGGGAGCTGGAGGCAGAGATATACCGTCTG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTACAGACGGTATATCTCTaGCTCCAGCTCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVQTVYL*LQLPAR
Trigger: CCTCGCAGGGAGCTGGAGGCAGAGATATACCGTCTG...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTACCTCCACATTTACGTaGAATGGGCAGGGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNITSTFT*NGQGPV
Trigger: CACTGGCCCCTGCCCATTGCACGTAAATGTGGAGGT...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTATCTGCAGCTCCTTGTaGCTGAGTCGGGCCAGGGGG +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTICSSL*LSRARG
Trigger: CCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGAT...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAACTTTGGTGGGATGCTaGGGACTTGGTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERTLVGC*GLGAWR
Trigger: CCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGAAGACCTGGCTCGCTaGCTTCCTGGAGGGACAATC +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVEDLAR*LPGGTI
Trigger: GATTGTCCCTCCAGGAAGGCAGCGAGCCAGGTCTTC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCTGGCCATCCAGCACTaGCCACCCCTCTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCLAIQH*PPLSFH
Trigger: ATGGAAAGAGAGGGGTGGGCAGTGCTGGATGGCCAG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGGGACAGGAGACTGTaGCATTGCCTTTTGGGACCG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGDRRL*HCLLGP
Trigger: CGGTCCCAAAAGGCAATGGCACAGTCTCCTGTCCCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGCCTGCTTGCTCCTCTaGTTGGGGCTGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVACLLL*LGLGVE
Trigger: TTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCAGGC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAGCGAGCTTCTCATCTaGCTGGTGGTAGAGCGGACG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERSELLI*LVVERT
Trigger: CGTCCGCTCTACCACCAGGCAGATGAGAAGCTCGCT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAGGACCAGGAGAGACTaGCTGAGGTTCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERRTRRD*LRFCLD
Trigger: GTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGGGAAAGGCCTCTGCTaGCATAGAAAAGCTGGACAC +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLGKGLC*HRKAGH
Trigger: GTGTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTTTGCCCGAGCAACACTaGCTCCAGTTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNILPEQH*LQFCHL
Trigger: CAGATGGCAGAACTGGAGGCAGTGTTGCTCGGGCAA...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACTCACCCAGGCTGGAGTaGAGTGGCCCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHSPRLE*SGPISA
Trigger: AGCTGAGATCGGGCCACTGCACTCCAGCCTGGGTGA...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTGGAGAAATCAGGGAGTaGGTAGTTCAACTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIGEIRE*VVQLPP
Trigger: CGGGGGCAGTTGAACTACCCACTCCCTGATTTCTCC...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGGTAGCTCTCATCTTTaGGGAATCTCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVGSSHL*GISPGA
Trigger: GGCCCCGGGTGAGATTCCCCAAAGATGAGAGCTACC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFDGPAQ*LAQASE
Trigger: TTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTAPRRS*SMVFSA
Trigger: GGCCGAGAACACCATTGACCAGCTACGCCTCGGGGC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGATGCAGAGCGGGGCTGTaGGATGGTGAAGGACAAGAC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERCRAGL*DGEGQD
Trigger: GTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCA...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAACAAAGGACTCCACCTTaGCCAGGAACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQQRTPP*PGTGWP
Trigger: AGGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTG...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCACATTTACGTGCAATaGGCAGGGGCCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCHIYVQ*AGASAG
Trigger: GCCAGCACTGGCCCCTGCCCATTGCACGTAAATGTG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACACATTTACGTGCAATaGGCAGGGGCCAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERHIYVQ*AGASAG
Trigger: GCCAGCACTGGCCCCTGCCCATTGCACGTAAATGTG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGAGGCCCACTTGGGCTaGAGAGGTACCTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCEAHLG*RGTSVL
Trigger: AAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGTGACTGGTCACAGGTaGGGGACAGGTTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERVTGHR*GTGLLQ
Trigger: CTGGAGCAAACCTGTCCCCCACCTGTGACCAGTCAC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTCCCCAGAGTCACCGCTaGTTCCTGTCAGCATCGGCC +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTPQSHR*FLSASA
Trigger: GGCCGATGCTGACAGGAACCAGCGGTGACTCTGGGG...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTCCATTGGGGCTGGCCTaGGCTTCACCTGGGCCACTT +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTPLGLA*ASPGPL
Trigger: AAGTGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGG...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCTCATGGGAACTTGCTaGGCTGTCCACATCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNILMGTC*AVHILC
Trigger: GCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAG...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAACAGGCAAGAGGCTCATaGGAACTTGCTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQQARGS*ELAGLS
Trigger: GGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTG...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAGGGCTGGTGTTTCCATaGCCTTCCAAGCTGAGACCA +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVGLVFP*PSKLRP
Trigger: TGGTCTCAGCTTGGAAGGCCATGGAAACACCAGCCC...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCAAGAGCCATGGGGCTaGTGTTTCCATGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFQEPWG*CFHGLP
Trigger: TGGAAGGCCATGGAAACACCAGCCCCATGGCTCTTG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAACATGCCCAAGAGCCATaGGGCTGGTGTTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQHAQEP*GWCFHG
Trigger: GCCATGGAAACACCAGCCCCATGGCTCTTGGGCATG...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCATGCCCAAGAGCCATaGGGCTGGTGTTTCCATGGC +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCHAQEP*GWCFHG
Trigger: GCCATGGAAACACCAGCCCCATGGCTCTTGGGCATG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAAGTCCTGGAATTCCATaGGGGTTGCCCGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVSPGIP*GLPEQH
Trigger: GTGTTGCTCGGGCAACCCCCATGGAATTCCAGGACT...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAGGAGCTGAGGAGTCCTaGAATTCCATGGGGGTTGCC +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTGAEES*NSMGVA
Trigger: GGCAACCCCCATGGAATTCCAGGACTCCTCAGCTCC...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAAAGAAAGGAGCACTaGAGAGTCCAGGTGCATACT +
Preference number: 4 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPERKEH*RVQVHT
Trigger: AGTATGCACCTGGACTCTCCAGTGCTCCTTTCTTTC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAGTGATCCACCTGCCTTaGCCTCCCTCAATGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTVIHLP*PPSMLG
Trigger: TCCCAGCATTGAGGGAGGCCAAGGCAGGTGGATCAC...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTATGTGTTCCTTGGGCTaGGGGCAGAAGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIMCSLG*GQKNLV
Trigger: GACCAGATTCTTCTGCCCTCAGCCCAAGGAACACAT...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTAGGGAGTGGCTTAGGTaGCGTCTTTGTCTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIREWLR*RLCLLP
Trigger: TGGAAGCAGACAAAGACGTCACCTAAGCCACTCCCT...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAGCTTGCTCAGGCGTCTaGAATTCTTGGGGTACCCTG +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTACSGV*NSWGTL
Trigger: CAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGC...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTACAGGGGACCTGCCTGTaGATTCTTTGTTCCAAACCC +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVQGTCL*ILCSKP
Trigger: GGGTTTGGAACAAAGAATTCACAGGCAGGTCCCCTG...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAG +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTVLCQG*FSTAQQ
Trigger: CTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGAC...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHRRRVL*QGCFST
Trigger: AGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCT...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCCAGCTCCCTaGGAGGATCAAATCTTCCAG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLPPAP*EDQIFQ
Trigger: CTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGTCTCTAGCCAGGGATaGCTGGAAACCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCVSSQG*LETWWL
Trigger: AAGCCACCAGGTTTCCAGGCATCCCTGGCTAGAGAC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGTCTCTAGCCAGGGATaGCTGGAAACCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERVSSQG*LETWWL
Trigger: AAGCCACCAGGTTTCCAGGCATCCCTGGCTAGAGAC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGTCTCTAGCCAGGGATaGCTGGAAACCTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVVSSQG*LETWWL
Trigger: AAGCCACCAGGTTTCCAGGCATCCCTGGCTAGAGAC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTTTCCATCCCGAGCTaGCTGTGGACTGTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLSIPS*LWTVLG
Trigger: ACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGAGTTGCACACATaGAGGACCAGGAGAGACTGC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLELHT*RTRRDC
Trigger: GCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCAGAAATGCAGAGGTATaGTGCTGCCACGGGGTAGGG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCRNAEV*CCHGVG
Trigger: CCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAGGCTCATGGGAACTTaGTGGGCTGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERRLMGT*WAVHIL
Trigger: GAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACACTGCCTCCAGTTCTaGCATCTGGGCTTAGGAGGT +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERHCLQF*HLGLGG
Trigger: ACCTCCTAAGCCCAGATGGCAGAACTGGAGGCAGTG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAACACTGCCTCCAGTTCTaGCATCTGGGCTTAGGAGGT +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQHCLQF*HLGLGG
Trigger: ACCTCCTAAGCCCAGATGGCAGAACTGGAGGCAGTG...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACTCTGCCAGCCCAAGCTaGTGCTCACAGACCAGCATC +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHSASPS*CSQTSI
Trigger: GATGCTGGTCTGTGAGCAGCAGCTTGGGCTGGCAGA...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACGGTAGCTCTCATCTTTaGGGAATCTCACCCGGGGCC +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHGSSHL*GISPGA
Trigger: GGCCCCGGGTGAGATTCCCCAAAGATGAGAGCTACC...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAATGTGGCTTCTGGACTTaGGGGGACGGTAGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQCGFWT*GDGSSH
Trigger: ATGAGAGCTACCGTCCCCCCAAGTCCAGAAGCCACA...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACGGCGTAGCTGGTCAATaGTGTTCTCGGCCTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHGVAGQ*CSRPQR
Trigger: ACGCTGAGGCCGAGAACACCATTGACCAGCTACGCC...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACAGAACAGGTTCACCTTaGCCCCGAGGCGTAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHRTGSP*PRGVAG
Trigger: ACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCT...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACTGCAGAGCGGGGCTGTaGGATGGTGAAGGACAAGAC +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHCRAGL*DGEGQD
Trigger: GTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCA...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGGAAGCCCTTGACTTaGTCCTGGGGCATGAGACGT +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVWKPLT*SWGMRR
Trigger: ACGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCA...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGCAGCCTTCAGCCGCTaGAAGCCCTTGACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTAAFSR*KPLTWS
Trigger: GGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAGGCTCTTGCTGGGTCTaGTCTATGTGTTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVGSCWV*SMCSFS
Trigger: GCTGAAGGAACACATAGACCAGACCCAGCAAGAGCC...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAGGCTCAGGCTCTTGCTaGGTCTGGTCTATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTGSGSC*VWSMCS
Trigger: GGAACACATAGACCAGACCCAGCAAGAGCCTGAGCC...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCCTCCATTCTCATaGCTTCTGGGAGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLPPPFS*LLGETS
Trigger: TGAAGTCTCTCCCAGAAGCCATGAGAATGGAGGAGG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGTGCAAAGGCTTCTGTaGAAGGCGCTCAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERVQRLL*KALRDA
Trigger: GGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCAC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGTGCAAAGGCTTCTGTaGAAGGCGCTCAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCVQRLL*KALRDA
Trigger: GGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCAC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGCTCTGTGGCTCTTCTaGGAATCAGAGAACCCCTGG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVALWLF*ESENPW
Trigger: CCAGGGGTTCTCTGATTCCCAGAAGAGCCACAGAGC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCATCCCGAGCTGCCTGTaGACTGTCCTTGGTGGTCTT +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCIPSCL*TVLGGL
Trigger: AAGACCACCAAGGACAGTCCACAGGCAGCTCGGGAT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCATGCTTTTCTCCTCGTaGTGGCCTTCTCTGCCCCAG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCMLFSS*WPSLPQ
Trigger: CTGGGGCAGAGAAGGCCACCACGAGGAGAAAAGCAT...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGCTTGCTCCTCTGCTTaGGGCTGGGAGTTGAAGATG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVACSSA*GWELKM
Trigger: CATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGTGGTGGATGGCATCCTaGGCACTTTGTAGCTTGTCT +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLWWMAS*ALCSLS
Trigger: AGACAAGCTACAAAGTGCCCAGGATGCCATCCACCA...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGGGGACCATGGTGGATaGCATCCTGGGCACTTTGTA +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERGDHGG*HPGHFV
Trigger: TACAAAGTGCCCAGGATGCCATCCACCATGGTCCCC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGATCCTAGGAGAAGCTaGGGACCATGCGTGAGGTAC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERDPRRS*GPCVRY
Trigger: GTACCTCACGCATGGTCCCCAGCTTCTCCTAGGATC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACCTGTGCCCTCTGTGTaGTGCTTCCTTCTGACCTTG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERPVPSV*CFLLTL
Trigger: CAAGGTCAGAAGGAAGCACCACACAGAGGGCACAGG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307564.8
CDS-3UTR CCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCGGGGCTGGTGGCATTaGGAAAGAGTCTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFRGWWH*ERVSLL
Trigger: AAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAATGTGTTCCTTGGGCTaGGGGCAGAAGAATCTGGTC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERMCSLG*GQKNLV
Trigger: GACCAGATTCTTCTGCCCTCAGCCCAAGGAACACAT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR TCA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGTTCAACGGATGGGTTaGCCTCGGAATGTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLVQRMG*PRNVQK
Trigger: TTTCTGAACATTCCGAGGTCAACCCATCCGTTGAAC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAACTCAACAGCACCTCCTaGACAATCTCAGCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQLNSTS*TISAGD
Trigger: GTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAG...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGGGCTGCTTCTCCACTaGTCAACAGCACCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTGLLLH*STAPPA
Trigger: TGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGGCGGCTCAGGCTCTTaGTGGGTCTGGTCTATGTGT +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTGGSGS*WVWSMC
Trigger: ACACATAGACCAGACCCAGCAAGAGCCTGAGCCGCC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGATGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERCFPWS*SHPINF
Trigger: GAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCA...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACAGGCTCATGGGAACTTaGTGGGCTGTCCACATCCTC +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHRLMGT*WAVHIL
Trigger: GAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCT...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGAATTCCATGGGGGTTaGCCGAGCAACACTGCCTCC +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTEFHGG*PSNTAS
Trigger: GGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCTGCACAATCTCAGCTaGAGACTTGAAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNILHNLS*RLEDEG
Trigger: CCCCTCATCTTCAAGTCTCCAGCTGAGATTGTGCAG...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCTGGTGATAGGGTaGGCAGGAGGCGTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTTLVIG*AGGVSF
Trigger: AAAGGACACGCCTCCTGCCCACCCTATCACCAGGGT...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACTGGAAGCCCTTGACTTaGTCCTGGGGCATGAGACGT +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHWKPLT*SWGMRR
Trigger: ACGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCA...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGGAGGTCTTGATGGCTaGCATGGGGGCTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTGGLDG*HGGLSR
Trigger: TCTGGACAAGCCCCCATGCCAGCCATCAAGACCTCC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGATGCAGCAAAGGGCTaGGCTAATGTTCCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVDAAKG*ANVPAV
Trigger: CACAGCAGGAACATTAGCCCAGCCCTTTGCTGCATC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAAGAACATGGTATTCGTaGCCTGTGTATTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVRTWYS*PVYWPR
Trigger: CCGGGGCCAATACACAGGCCACGAATACCATGTTCT...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTAAAGTTTGTCCCCACTaGCTTGTTCGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIKVCPH*LVRQKP
Trigger: TGGCTTCTGGCGAACAAGCCAGTGGGGACAAACTTT...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGCTGAGTTCAACGGATaGGTTGACCTCGGAATGTTC +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFAEFNG*VDLGMF
Trigger: GAACATTCCGAGGTCAACCCATCCGTTGAACTCAGC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTRLSLG*SRLTVP
Trigger: TGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCT...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACTCCTCCATCTATCTGTaGCATGCTGCGGACTCTGGG +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHSSIYL*HAADSG
Trigger: CCCAGAGTCCGCAGCATGCCACAGATAGATGGAGGA...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGCAACCTCCGCCTCCTaGGCTCAAGAGATTCACCTG +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTATSAS*AQEIHL
Trigger: CAGGTGAATCTCTTGAGCCCAGGAGGCGGAGGTTGC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAGGTGACGTCTTTGTCTaGTTCCAGATGTGTTCCTTG +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVGDVFV*FQMCSL
Trigger: CAAGGAACACATCTGGAAGCAGACAAAGACGTCACC...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACTGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTC +
Preference number: 4 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHCFPWS*SHPINF
Trigger: GAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCA...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTAGGCATGAGCCACTGTaGCCAGCTGAGAATAATGTT +
Preference number: 4 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIRHEPL*PAENNV
Trigger: AACATTATTCTCAGCTGGGCACAGTGGCTCATGCCT...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCTGCACAATCTCAGCTaGAGACTTGAAGATGAGGGG +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCLHNLS*RLEDEG
Trigger: CCCCTCATCTTCAAGTCTCCAGCTGAGATTGTGCAG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACACCTCCTCCATTCTCATaGCTTCTGGGAGAGACTTCA +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTPPPFS*LLGETS
Trigger: TGAAGTCTCTCCCAGAAGCCATGAGAATGGAGGAGG...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAAAGTTTGTCCCCACTaGCTTGTTCGCCAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERKVCPH*LVRQKP
Trigger: TGGCTTCTGGCGAACAAGCCAGTGGGGACAAACTTT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGAGGGCAGAAGAATCTaGTCGTTTCTCTCCTCCATC +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQEGRRI*SFLSSI
Trigger: GATGGAGGAGAGAAACGACCAGATTCTTCTGCCCTC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGATCTCCCAAACCAGTTTaGGCAGATGGCCCATTGGAA +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERSPKPV*ADGPLE
Trigger: TTCCAATGGGCCATCTGCCCAAACTGGTTTGGGAGA...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGTTCAACGGATGGGTTaGCCTCGGAATGTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQVQRMG*PRNVQK
Trigger: TTTCTGAACATTCCGAGGTCAACCCATCCGTTGAAC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAAAGGCCCTCCGCAGTTaGAAGATTTATGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERKALRS*KIYGSE
Trigger: CTCAGAACCATAAATCTTTCAACTGCGGAGGGCCTT...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR TCA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATATACATTCCACACTTaGAGAGGCAGGACAGGTAAG +
Preference number: 4 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVYTFHT*RGRTGK
Trigger: CTTACCTGTCCTGCCTCTTCAAGTGTGGAATGTATA...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTCAGAAATCCGTTTGTaGCCCTCAAACTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCSEIRL*PSNSEP
Trigger: TGGCTCAGAGTTTGAGGGGCACAAACGGATTTCTGA...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGATCAGAAATCCGTTTGTaGCCCTCAAACTCTGAGCCA +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERSEIRL*PSNSEP
Trigger: TGGCTCAGAGTTTGAGGGGCACAAACGGATTTCTGA...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVCPWWS*SSQRTV
Trigger: CACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACA...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTACACACATTCCAGAAATaGAGAGGTATGCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVHTFQK*RGMLLP
Trigger: TGGCAGCAGCATACCTCTGCATTTCTGGAATGTGTG...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACAGCAACTTGCTGTGTaGCTCATTTACATCTCTGGC +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERQQLAV*LIYISG
Trigger: GCCAGAGATGTAAATGAGGCACACAGCAAGTTGCTG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CCA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACATTCTCATGGCTTCTaGGAGAGACTTCACACTGAG +
Preference number: 4 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERHSHGF*ERLHTE
Trigger: CTCAGTGTGAAGTCTCTCCCAGAAGCCATGAGAATG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR GCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAATTATTAGCTGGAGTTaGACACATGCAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVIISWS*THAGPG
Trigger: TCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAAT...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCTGGAAACAAACATTCTaGAGGAAAGGCTCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFWKQTF*RKGSVT
Trigger: AGTCACTGAGCCTTTCCTGCAGAATGTTTGTTTCCA...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTACAGGCAATCTCTCTGTaGATTTACTGCCATAATGGG +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVQAISL*IYCHNG
Trigger: CCCATTATGGCAGTAAATCCACAGAGAGATTGCCTG...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATTAGGGGACAGAACATaGTATTCGTGGCCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVLGDRT*YSWPVY
Trigger: ATACACAGGCCACGAATACCATGTTCTGTCCCCTAA...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR GCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGGGCATGAGACGTCCTaGCTGTATCAGTCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTGHETS*LYQSFK
Trigger: TTTGAAAGACTGATACAGGCAGGACGTCTCATGCCC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR GCA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACAAGGCGTGTACCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTRRVPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGTACACGCCT...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CCA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTCATTCTCATGGCTTCTaGGAGAGACTTCACACTGAG +
Preference number: 4 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTHSHGF*ERLHTE
Trigger: CTCAGTGTGAAGTCTCTCCCAGAAGCCATGAGAATG...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR TCA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAAAAGATTTATGGTTCTaGGATAGGCAAAGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVKDLWF*DRQRGK
Trigger: TTTCCCCCTTTGCCTATCTCAGAACCATAAATCTTT...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS GCA 90 bp GTCTGCTGGCCGGCCGCGGGTCCGGGCGGGGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCCCTGGAGTGGCTGGTGCAGGCTGTC +
Preference number: 5 (lower is better)
Translates to: VCWPAAGPGGAVKGR*WACRAALEWLVQAV
Trigger: GACAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGCCCCGCCCGGACCCGCGGCCGGCCAGCAGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS CCA 90 bp TGCTGGCCGGCCGCGGGTCCGGGCGGGGCGGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTGGAGTGGCTGGTGCAGGCTGTCTTC +
Preference number: 5 (lower is better)
Translates to: CWPAAGPGGAVKGRC*ACRAALEWLVQAVF
Trigger: GAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGCCCCGCCCGGACCCGCGGCCGGCCAGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS GCA 90 bp GGCCGCAGAGGCCTGGGGGTCCTCGGCCGGGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGATGGTGAAGGACAAGACCTTGGTCCC +
Preference number: 5 (lower is better)
Translates to: GRRGLGVLGRARPPL*RAGLWDGEGQDLGP
Trigger: GGGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGCCCGGCCGAGGACCCCCAGGCCTCTGCGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 90 bp CCATCGGGCTGCGGGTGTGGGTCCCACTCCAGGGGCGGCAGGTGCTaGTGGGCCAGGCGGAAGTCCTCTAGGAGCTCGGGGCTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PSGCGCGSHSRGGRC*WARRKSSRSSGLVA
Trigger: TGCCACCAGCCCCGAGCTCCTAGAGGACTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCTGGAGTGGGACCCACACCCGCAGCCCGATGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CCA 90 bp CGGGCGGGGCGGTCAAAGGCAGATGCTGGGCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTGTCTTCCAGCCGCAGACGAAGCCGG +
Preference number: 5 (lower is better)
Translates to: RAGRSKADAGRVGLP*SGWCRLSSSRRRSR
Trigger: CCGGCTTCGTCTGCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGCCCCGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000491133.1
CDS-3UTR CAA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGCGGCTGGGCAGGGTGTaGCTCCCGACAAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQRLGRV*LPTSLQ
Trigger: CTGAAGGCTTGTCGGGAGCAACACCCTGCCCAGCCG...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGCTGGCATGGGGGCTaGTCCAGAAGGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGWHGG*SRRSRQ
Trigger: CTGCCTGCTCCTTCTGGACAAGCCCCCATGCCAGCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp AGCGGACGCTCTCGGCAGCCTGCACGGCCCGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCAGGTCGAGCTGGATGGAGTGCCGGT +
Preference number: 5 (lower is better)
Translates to: SGRSRQPARPGSGPC*APLGRPGRAGWSAG
Trigger: ACCGGCACTCCATCCAGCTCGACCTGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGTCCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS-3UTR CAA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCCTTCCAGGCGTCCCCTaGGAGCCGGCAAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPLPGVP*EPASGW
Trigger: CCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAG...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGAATTCCATGGGGGTaGCCCGAGCAACACTGCCTC +
Preference number: 5 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGIPWG*PEQHCL
Trigger: GAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp GCCCCCGCTGACACCAGGAGCTGCACCCATCCCGGCCCTCCCTCCTaGCCTACCTGTGTATTGGCCCCGGAAGGTGACCCTGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: APADTRSCTHPGPPS*PTCVLAPEGDPVWP
Trigger: TGGCCAGACAGGGTCACCTTCCGGGGCCAATACACAGGTAGGTCAGGAGGGAGGGCCGGGATGGGTGCAGCTCCTGGTGTCAGCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 90 bp CTTCCAGGCGTCCCCTTGGAGCCGGCAAGCGGCTGGGCAGGGTGTTaGTCCCGACAAGCCTTCAGGTACTCCTCCTCTAGGGCCGCGTGG +
Preference number: 5 (lower is better)
Translates to: LPGVPLEPASGWAGC*SRQAFRYSSSRAAW
Trigger: CCACGCGGCCCTAGAGGAGGAGTACCTGAAGGCTTGTCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 90 bp GGGGACGCCATCCAGGTCTCCTCCAGGTGGGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGGCGCTCAGAGATGCCGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: GDAIQVSSRWGPPPR*KGFCGRRSEMPLPS
Trigger: GGAGGGAAGCGGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTGGATGGCGTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 90 bp CGGCTCAGGGCCTTGTTGAGCTCCTCTAGGTCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTCCGGGCTGGTGGGGGAGAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RLRALLSSSRSPRSS*MECRCLRAGGGEAV
Trigger: CACAGCCTCTCCCCCACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGACCTGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS-3UTR CAA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCACCGGGCACTGCCTaGGGAGGACCCTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLAPGTA*GGPWWP
Trigger: AGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGACGACCCCGCCTGCTaGCTCCTCTGCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPDDPAC*LLCLGL
Trigger: CAGCCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGACGACCCCGCCTGCTaGCTCCTCTGCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGDDPAC*LLCLGL
Trigger: CAGCCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS TCA 90 bp GAAGAGGCAGGAGCCCCGCAGGCTGTGAGCCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTGCCTGGTGGTAGAGCGGACGCTCTC +
Preference number: 5 (lower is better)
Translates to: EEAGAPQAVSLAQVG*QRASHLPGGRADAL
Trigger: GAGAGCGTCCGCTCTACCACCAGGCAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTCCTGCCTCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS GCA 90 bp GAGCTTCTCATCTGCCTGGTGGTAGAGCGGACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCCTTGTTGAGCTCCTCTAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: ELLICLVVERTLSAA*TARLRALLSSSRSP
Trigger: GGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGTCCGCTCTACCACCAGGCAGATGAGAAGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 90 bp CGGTCAAAGGCAGATGCTGGGCGTGTCGGGCTGCCCTGGAGTGGCTaGTGCAGGCTGTCTTCCAGCCGCAGACGAAGCCGGGACACCTCT +
Preference number: 5 (lower is better)
Translates to: RSKADAGRVGLPWSG*CRLSSSRRRSRDTS
Trigger: AGAGGTGTCCCGGCTTCGTCTGCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000491133.1
CDS-3UTR CAA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCTCTCCGAGCTGGCCATaGGGGCTGGCCTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPSPSWP*GLAWAS
Trigger: TGAAGCCCAGGCCAGCCCCAATGGCCAGCTCGGAGA...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS GCA 90 bp AACCGCCATCTCGGCTGCCAGTGTCCGCTCCAGGCTGAAGTTGGGTaGCCTCTGCCGGAGAGGCCCACTTGGGCTGGAGAGGTACCTCTG +
Preference number: 5 (lower is better)
Translates to: NRHLGCQCPLQAEVG*PLPERPTWAGEVPL
Trigger: CAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTGGAGCGGACACTGGCAGCCGAGATGGCGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp CTGCCTCCAGCTCCCTGCGAGGATCAAATCTTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGGCAGGGTGTTGCTCCCGACAAGCCT +
Preference number: 5 (lower is better)
Translates to: LPPAPCEDQIFQASP*SRQAAGQGVAPDKP
Trigger: AGGCTTGTCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp TTCCCTCCAGGCTGGTCATACTACTTTGGTGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTGGCACGCCAGGGCCTGGAGGGGCTG +
Preference number: 5 (lower is better)
Translates to: FPPGWSYYFGGMLRT*CLEGGVARQGLEGL
Trigger: CAGCCCCTCCAGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 90 bp CCTTCCCCAGGCCAGGCTCAGCCCAGCGGATCTCAGTCTCCGAGCTaGCCATTGGGGCTGGCCTGGGCTTCACCTGGGCCACTTCATCTT +
Preference number: 5 (lower is better)
Translates to: PSPGQAQPSGSQSPS*PLGLAWASPGPLHL
Trigger: AAGATGAAGTGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGATCCGCTGGGCTGAGCCTGGCCTGGGGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS-3UTR CAA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCGGCTGGGCAGGGTGTaGCTCCCGACAAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGRLGRV*LPTSLQ
Trigger: CTGAAGGCTTGTCGGGAGCAACACCCTGCCCAGCCG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCTTCCAGGCGTCCCCTaGGAGCCGGCAAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLPGVP*EPASGW
Trigger: CCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGGGCGGCTCAGGCTCTaGCTGGGTCTGGTCTATGTG +
Preference number: 5 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPGRLRL*LGLVYV
Trigger: CACATAGACCAGACCCAGCAAGAGCCTGAGCCGCCC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTGGCTGGCATGGGGGCTaGTCCAGAAGGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLGWHGG*SRRSRQ
Trigger: CTGCCTGCTCCTTCTGGACAAGCCCCCATGCCAGCC...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGGGGTGAAACTCTGCTaGTTTCTGAGCCCACAAAGC +
Preference number: 5 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQGVKLC*FLSPQS
Trigger: GCTTTGTGGGCTCAGAAACAAGCAGAGTTTCACCCC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGCTGTGGGCGGCCACTaGGCAGCTGGTTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAAVGGH*AAGWAE
Trigger: CTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAGC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCGGCTCAGGGCCTTGTaGAGCTCCTCTAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLRLRAL*SSSRSP
Trigger: GGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCGCCCGGCTCAGGGCCTaGTTGAGCTCCTCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGARLRA*LSSSRS
Trigger: CGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGC...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCTAGGCAAGAGGCGGTaGCCTGGGCCAGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEALGKRR*PGPGQG
Trigger: GCCCTGTCCTGGCCCAGGCAACCGCCTCTTGCCTAG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS TCA 90 bp TGGTGGGGGAGAGGCTGTGGGCGGCCACTTGGCAGCTGGTTGGGCTaGGGTAGGTCCTGCAGGCGCATAGTACACAGCGGCAGGTGGATA +
Preference number: 5 (lower is better)
Translates to: WWGRGCGRPLGSWLG*GRSCRRIVHSGRWI
Trigger: TATCCACCTGCCGCTGTGTACTATGCGCCTGCAGGACCTACCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS GCA 90 bp AGAGATGCCGCTTCCCTCCAGGCTGGTCATACTACTTTGGTGGGATaGTGCGGACTTGGTGCCTGGAGGGTGGGGTGGCACGCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RDAASLQAGHTTLVG*CGLGAWRVGWHARA
Trigger: GGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCGGCATCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS GCA 90 bp TGCCCTCTGCCGGAGAGGCCCACTTGGGCTGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCTGGGCTCTGTGGCTCTTCTGGGAAT +
Preference number: 5 (lower is better)
Translates to: CPLPERPTWAGEVPL*LAPGCAGLCGSSGN
Trigger: ATTCCCAGAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGCAGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS GCA 90 bp ATCTCGGCTGCCAGTGTCCGCTCCAGGCTGAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGGCTGGAGAGGTACCTCTGTGCTTGG +
Preference number: 5 (lower is better)
Translates to: ISAASVRSRLKLGAL*RRGPLGLERYLCAW
Trigger: CCAAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTGGAGCGGACACTGGCAGCCGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS GCA 90 bp TGCAGGCTGTCTTCCAGCCGCAGACGAAGCCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGGTCTCGCCCTGCCCTGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: CRLSSSRRRSRDTSS*SSQMAWSRPALVSR
Trigger: CCTGCTCACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCGGCTTCGTCTGCGGCTGGAAGACAGCCTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS GCA 90 bp TCAAAGGCAGATGCTGGGCGTGTCGGGCTGCCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGCAGACGAAGCCGGGACACCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SKADAGRVGLPWSGW*RLSSSRRRSRDTSS
Trigger: AGAAGAGGTGTCCCGGCTTCGTCTGCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000491133.1
CDS CCA 90 bp TGTTGCTCCCGACAAGCCTTCAGGTACTCCTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGGAAGCCCTTGACTTGGTCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: CCSRQAFRYSSSRAA*AAFSRWKPLTWSWG
Trigger: GCCCCAGGACCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGAGGAGTACCTGAAGGCTTGTCGGGAGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp GGTCTCCTCCAGGTGGGGCCCACCGCCTCGGTGCAAAGGCTTCTGTaGAAGGCGCTCAGAGATGCCGCTTCCCTCCAGGCTGGTCATACT +
Preference number: 5 (lower is better)
Translates to: GLLQVGPTASVQRLL*KALRDAASLQAGHT
Trigger: AGTATGACCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCCCCACCTGGAGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 90 bp ACCACACAGGGGACACTGAAGGGTATCAGCGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACCACCCGCATCCTGGGTCCTAATGGG +
Preference number: 5 (lower is better)
Translates to: TTQGTLKGISGRRSQ*VPCDSTTRILGPNG
Trigger: CCCATTAGGACCCAGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCCGCTGATACCCTTCAGTGTCCCCTGTGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS-3UTR CAA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGACCCGGGGCCCTACCTaGGAGAAATCAGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLTRGPT*EKSGSG
Trigger: CCCACTCCCTGATTTCTCCAAGGTAGGGCCCCGGGT...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCAGCCGCTGGAAGCCCTaGACTTGGTCCTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGSRWKP*TWSWGM
Trigger: CATGCCCCAGGACCAAGTCAAGGGCTTCCAGCGGCT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGCACCGGGCACTGCCTaGGGAGGACCCTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: PVTRRKVSGYALPSDACPAPGTA*GGPWWP
Trigger: AGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTGC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGCCGGAGAGGCCCACTaGGGCTGGAGAGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAAGEAH*GWRGTS
Trigger: AGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp CAGGAACTGGCTGGCCTGAGAAGCCAGTGCCTGGGTCTGCTCTGCTaGGGACTGGTCCTCAGAGATGTCCCGGTTCTCCGGAAGCCACCC +
Preference number: 5 (lower is better)
Translates to: QELAGLRSQCLGLLC*GLVLRDVPVLRKPP
Trigger: GGGTGGCTTCCGGAGAACCGGGACATCTCTGAGGACCAGTCCTCAGCAGAGCAGACCCAGGCACTGGCTTCTCAGGCCAGCCAGTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp TCCCGGCCCTCCCTCCTGACCTACCTGTGTATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAGCACTGCCCACCCCTCTCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: SRPSLLTYLCIGPGR*PCLAIQHCPPLSFH
Trigger: ATGGAAAGAGAGGGGTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAATACACAGGTAGGTCAGGAGGGAGGGCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 90 bp GCCCACTTGGGCTGGAGAGGTACCTCTGTGCTTGGCTCCGGGGTGTaGTGGGCTCTGTGGCTCTTCTGGGAATCAGAGAACCCCTGGCCT +
Preference number: 5 (lower is better)
Translates to: AHLGWRGTSVLGSGV*WALWLFWESENPWP
Trigger: AGGCCAGGGGTTCTCTGATTCCCAGAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCCAGCCCAAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS GCA 90 bp TCCGTGGCCTCCCTGGCATGGGAAGAGAAGACCATCCTTGAGTTCTaGCAGGCAGCCCTGACGCAGGGGTTGGCCTGTCCTGGGAGCCAA +
Preference number: 5 (lower is better)
Translates to: SVASLAWEEKTILEF*QAALTQGLACPGSQ
Trigger: TTGGCTCCCAGGACAGGCCAACCCCTGCGTCAGGGCTGCCTGGCAGAACTCAAGGATGGTCTTCTCTTCCCATGCCAGGGAGGCCACGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490767.1
CDS CCA 90 bp CTCTGCCGGAGAGGCCCACTTGGGCTGGAGAGGTACCTCTGTGCTTaGCTCCGGGGTGTGCTGGGCTCTGTGGCTCTTCTGGGAATCAGA +
Preference number: 5 (lower is better)
Translates to: LCRRGPLGLERYLCA*LRGVLGSVALLGIR
Trigger: TCTGATTCCCAGAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGCAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCAGCCGCTGGAAGCCCTaGACTTGGTCCTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEASRWKP*TWSWGM
Trigger: CATGCCCCAGGACCAAGTCAAGGGCTTCCAGCGGCT...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACTTCCAGGCGTCCCCTaGGAGCCGGCAAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPLPGVP*EPASGW
Trigger: CCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGGGCGGCTCAGGCTCTaGCTGGGTCTGGTCTATGTG +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAGRLRL*LGLVYV
Trigger: CACATAGACCAGACCCAGCAAGAGCCTGAGCCGCCC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGCTGGCATGGGGGCTaGTCCAGAAGGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGWHGG*SRRSRQ
Trigger: CTGCCTGCTCCTTCTGGACAAGCCCCCATGCCAGCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTCAGGGCAGGAGGTCTaGATGGCTGGCATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEASGQEV*MAGMGA
Trigger: AGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTGA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGTGCTGGGGGCGCTGTaGCCAGATACCACAGTCCGG +
Preference number: 5 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPVLGAL*PDTTVR
Trigger: CCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCAC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCGCTGTGGGCGGCCACTaGGCAGCTGGTTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: PVTRRKVSGYALPSDACPAVGGH*AAGWAE
Trigger: CTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAGC...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTTTGTCCCCACTGGCTaGTTCGCCAGAAGCCACCCA +
Preference number: 5 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGFVPTG*FARSHP
Trigger: TGGGTGGCTTCTGGCGAACAAGCCAGTGGGGACAAA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTGGCCTCATGGCCGCAGGAATGTTCAGAAAGTTaGTCCCCACTGGCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: MLLPRGRGAGGGLASWPQECSES*SPLACS
Trigger: CGAACAAGCCAGTGGGGACAAACTTTCTGAACATTC...CTGCGGCCATGAGGCCAGGCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCCCCTGGGAAAGGGCTaGGCTGGGCATCAAACCTAC +
Preference number: 5 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGPLGKG*AGHQTY
Trigger: GTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS TCA 90 bp CCTCCATCTATCTGTGGCATGCTGCGGACTCTGGGCTGGGGGAGCTaGGGAGTCCTGGAATTCCATGGGGGTTGCCCGAGCAACACTGCC +
Preference number: 5 (lower is better)
Translates to: PPSICGMLRTLGWGS*GVLEFHGGCPSNTA
Trigger: GGCAGTGTTGCTCGGGCAACCCCCATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp CATCTTCTCCGTGGCCTCCCTGGCATGGGAAGAGAAGACCATCCTTaGGTTCTGCCAGGCAGCCCTGACGCAGGGGTTGGCCTGTCCTGG +
Preference number: 5 (lower is better)
Translates to: HLLRGLPGMGREDHP*VLPGSPDAGVGLSW
Trigger: CCAGGACAGGCCAACCCCTGCGTCAGGGCTGCCTGGCAGAACTCAAGGATGGTCTTCTCTTCCCATGCCAGGGAGGCCACGGAGAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490767.1
CDS GCA 90 bp GAGCTGAGGAGTCCTGGAATTCCATGGGGGTTGCCCGAGCAACACTaGCTCCAGTTCTGCCATCTGGGCTTAGGAGGTGGTGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: ELRSPGIPWGLPEQH*LQFCHLGLGGGGWG
Trigger: GCCCCAGCCACCACCTCCTAAGCCCAGATGGCAGAACTGGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTCCAGGACTCCTCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp CGAGGATCAAATCTTCCAGGCGTCCCCTTGGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGACAAGCCTTCAGGTACTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RGSNLPGVPLEPASG*AGCCSRQAFRYSSS
Trigger: AGAGGAGGAGTACCTGAAGGCTTGTCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAGATTTGATCCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp TCTGTGGCATGCTGCGGACTCTGGGCTGGGGGAGCTGAGGAGTCCTaGAATTCCATGGGGGTTGCCCGAGCAACACTGCCTCCAGTTCTG +
Preference number: 5 (lower is better)
Translates to: SVACCGLWAGGAEES*NSMGVARATLPPVL
Trigger: CAGAACTGGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGCCACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp ACGGCCCTGCTGGGGGAGCCAGGCAAGAGGCTCATGGGAACTTGCTaGGCTGTCCACATCCTCTGCTTCAGCCTCTGGAAAGACAGGCCA +
Preference number: 5 (lower is better)
Translates to: TALLGEPGKRLMGTC*AVHILCFSLWKDRP
Trigger: TGGCCTGTCTTTCCAGAGGCTGAAGCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTGGCTCCCCCAGCAGGGCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374075.9
CDS-3UTR CAA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCTTCCAGGCGTCCCCTaGGAGCCGGCAAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRLPGVP*EPASGW
Trigger: CCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCTGTGGGCGGCCACTaGGCAGCTGGTTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPAVGGH*AAGWAE
Trigger: CTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAGC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCGGCTCAGGGCCTTGTaGAGCTCCTCTAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLRLRAL*SSSRSP
Trigger: GGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTACGGCTCAGGGCCTTGTaGAGCTCCTCTAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLRLRAL*SSSRSP
Trigger: GGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCG...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGCCCGGCTCAGGGCCTaGTTGAGCTCCTCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLARLRA*LSSSRS
Trigger: CGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCAACCGTAGGCCTTTCTaGTCTGGCCCCCTAAAGAGG +
Preference number: 5 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPNRRPF*SGPLKR
Trigger: CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTT...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGAACCGTAGGCCTTTCTaGTCTGGCCCCCTAAAGAGG +
Preference number: 5 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGNRRPF*SGPLKR
Trigger: CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTT...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCCCTGGGAAAGGGCTaGGCTGGGCATCAAACCTAC +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPLGKG*AGHQTY
Trigger: GTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp AGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCCTTTGGGCAGATGGCCCATaGGAACCCCACTCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: RRDLCWRETLLVRNYAGLWADGP*EPHSPH
Trigger: ATGAGGAGAGTGGGGTTCCAATGGGCCATCTGCCCA...AAGGCCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS TCA 90 bp GGCTCCACCACCGTCCTGCCGACCCAGTTTCAGGGGACCTGCCTGTaGATTCTTTGTTCCAAACCCAGGGAGCCCCCTGTCTCCATTGCG +
Preference number: 5 (lower is better)
Translates to: GSTTVLPTQFQGTCL*ILCSKPREPPVSIA
Trigger: CGCAATGGAGACAGGGGGCTCCCTGGGTTTGGAACAAAGAATTCACAGGCAGGTCCCCTGAAACTGGGTCGGCAGGACGGTGGTGGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312033.3
ENST00000374088.8
CDS GCA 90 bp GCCCACCGCCTCGGTGCAAAGGCTTCTGTGGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGGTCATACTACTTTGGTGGGATGCTG +
Preference number: 5 (lower is better)
Translates to: AHRLGAKASVEGAQR*RFPPGWSYYFGGML
Trigger: CAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS GCA 90 bp GACAGTCGGAGCACCTCCCGAGGCACTGAGGAAGACCTGGCTCGCTaGCTTCCTGGAGGGACAATCTGCTCTTCACCTCTAGGCTCACCA +
Preference number: 5 (lower is better)
Translates to: DSRSTSRGTEEDLAR*LPGGTICSSPLGSP
Trigger: TGGTGAGCCTAGAGGTGAAGAGCAGATTGTCCCTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTGCTCCGACTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 90 bp CCATCGGTCTCTCCTTCCCAGGTAGAATCAAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCACTGCTCCAGGACCTTGCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: PSVSPSQVESRLSLG*SRLTVPLLQDLAGL
Trigger: CAGCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCTTGATTCTACCTGGGAAGGAGAGACCGATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTACCCGGGGCCCTACCTaGGAGAAATCAGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLTRGPT*EKSGSG
Trigger: CCCACTCCCTGATTTCTCCAAGGTAGGGCCCCGGGT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCATCTCAGCTGGAGACTaGAAGATGAGGGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGISAGD*KMRGLA
Trigger: TGCCAGGCCCCTCATCTTCAAGTCTCCAGCTGAGAT...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTCAAAGGACTCCACCTaGGCCAGGAACTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPSKDST*ARNWLA
Trigger: GGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTGA...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTCAAAGGACTCCACCTaGGCCAGGAACTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPSKDST*ARNWLA
Trigger: GGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTGA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAGCCGCTGGAAGCCCTaGACTTGGTCCTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSRWKP*TWSWGM
Trigger: CATGCCCCAGGACCAAGTCAAGGGCTTCCAGCGGCT...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTGGGCGGCTCAGGCTCTaGCTGGGTCTGGTCTATGTG +
Preference number: 5 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLGRLRL*LGLVYV
Trigger: CACATAGACCAGACCCAGCAAGAGCCTGAGCCGCCC...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGGCTGGCATGGGGGCTaGTCCAGAAGGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPGWHGG*SRRSRQ
Trigger: CTGCCTGCTCCTTCTGGACAAGCCCCCATGCCAGCC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATCAGGGCAGGAGGTCTaGATGGCTGGCATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSGQEV*MAGMGA
Trigger: AGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTGA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATCCATCTGCAGCTCCTaGTGCCTGAGTCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSICSS*CLSRAR
Trigger: CCTGGCCCGACTCAGGCACAAGGAGCTGCAGATGGA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GACCCTCCTGGTGAGGAACTATGCGGGCCTTCTGGGCCTCAGCAGCTCCAGCCCGAGGCCATGGTAAACTaGCTCCATCTGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: DPPGEELCGPSGPQQLQPEAMVN*LHLQLL
Trigger: AAGGAGCTGCAGATGGAGCAAGTTTACCATGGCCTC...GGGCTGGAGCTGCTGAGGCCCAGAAGGCCCGCATAGTTCCTCACCAGGAGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGCACCGGGCACTGCCTaGGGAGGACCCTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPAPGTA*GGPWWP
Trigger: AGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTGC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGTGGGATGCTGCGGACTaGGTGCCTGGAGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVWDAAD*VPGGWG
Trigger: ACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCA...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGCCGGAGAGGCCCACTaGGGCTGGAGAGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPAGEAH*GWRGTS
Trigger: AGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGGGGCTGATTGTCTTGTaGGGAAGGGGCTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGGLIVL*GRGCSE
Trigger: TTCTGAACAGCCCCTTCCCAACAAGACAATCAGCCC...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCCTGTGGACTGTCCTaGGTGGTCTTGCTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLACGLS*VVLLFS
Trigger: TGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGTGCTGGGGGCGCTGTaGCCAGATACCACAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVVLGAL*PDTTVR
Trigger: CCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCAC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCCCTCATACCCCAACCTaGAGGAGCTCTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAPHTPT*RSSLQP
Trigger: AGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAGG...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCCTCTCCCAAACCAGTTaGGGCAGATGGCCCATTGGA +
Preference number: 5 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGLSQTS*GRWPIG
Trigger: TCCAATGGGCCATCTGCCCAAACTGGTTTGGGAGAG...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCAGCCCCCTGTCTCCATaGCGCCCTGGCCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSPLSP*RPGPPP
Trigger: TGGAGGTGGGCCAGGGCGCAATGGAGACAGGGGGCT...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS GCA 90 bp TACCCTGGTGATAGGGTGGGCAGGAGGCGTGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAGCACCTCCTGCACAATCTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: YPGDRVGRRRVLCQG*FSTAQQHLLHNLSW
Trigger: CCAGCTGAGATTGTGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCTGCCCACCCTATCACCAGGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp CATGACTTTTCTCAGCCTGCACCGGGCACTGCCTTGGGAGGACCCTaGTGGCCTCTGCTTTCCCTGGAGTTGCAGCCACCCCATCAACTT +
Preference number: 5 (lower is better)
Translates to: HDFSQPAPGTALGGP*WPLLSLELQPPHQL
Trigger: AAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGCTGAGAAAAGTCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp GCCTTGCCCAGGCCTGACATGTGCCCGTCTCTAGCCAGGGATGCCTaGAAACCTGGTGGCTTCATAGATACCATCTTCTCCGTGGCCTCC +
Preference number: 5 (lower is better)
Translates to: ALPRPDMCPSLARDA*KPGGFIDTIFSVAS
Trigger: GGAGGCCACGGAGAAGATGGTATCTATGAAGCCACCAGGTTTCCAGGCATCCCTGGCTAGAGACGGGCACATGTCAGGCCTGGGCAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 90 bp TGCTGGGCTCTGTGGCTCTTCTGGGAATCAGAGAACCCCTGGCCTTaGGGTAGGAAGCTCCATCCCTGGGCACAGATGCAGCAAAGGGCT +
Preference number: 5 (lower is better)
Translates to: CWALWLFWESENPWP*GRKLHPWAQMQQRA
Trigger: AGCCCTTTGCTGCATCTGTGCCCAGGGATGGAGCTTCCTACCCCAAGGCCAGGGGTTCTCTGATTCCCAGAAGAGCCACAGAGCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp GCAGGTGCTGCTGGGCCAGGCGGAAGTCCTCTAGGAGCTCGGGGCTaGTGGCATTGGGAAAGAGTCTCTCTTCTTCCCAGCTTTGTGAAC +
Preference number: 5 (lower is better)
Translates to: AGAAGPGGSPLGARG*WHWERVSLLPSFVN
Trigger: GTTCACAAAGCTGGGAAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAGAGGACTTCCGCCTGGCCCAGCAGCACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CCA 90 bp CTGGTCGTTTCTCTCCTCCATCTATCTGTGGCATGCTGCGGACTCTaGGCTGGGGGAGCTGAGGAGTCCTGGAATTCCATGGGGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LVVSLLHLSVACCGL*AGGAEESWNSMGVA
Trigger: GGCAACCCCCATGGAATTCCAGGACTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATGGAGGAGAGAAACGACCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp GAACGGGGCCGTATCCGTGTCGTGCTCCGCCCAGTGCCTGGCAGATaGAAAGCAGTTGATGTTATGAGAAAGCTGGGCGGACTGTGGCCT +
Preference number: 5 (lower is better)
Translates to: ERGRIRVVLRPVPGR*KAVDVMRKLGGLWP
Trigger: AGGCCACAGTCCGCCCAGCTTTCTCATAACATCAACTGCTTTCCATCTGCCAGGCACTGGGCGGAGCACGACACGGATACGGCCCCGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGACCAGCTCAGTGGCTaGCTCAGGCGTCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEADQLSG*LRRLKF
Trigger: GAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGAGAACAGGTTCACCTaGGCCCCGAGGCGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVENRFT*APRRSW
Trigger: CCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCTC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATCAGGGCAGGAGGTCTaGATGGCTGGCATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPSGQEV*MAGMGA
Trigger: AGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTGA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCACCGGGCACTGCCTaGGGAGGACCCTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAPGTA*GGPWWP
Trigger: AGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGGCTGGTCATACTACTTaGGTGGGATGCTGCGGACTT +
Preference number: 5 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLAGHTT*VGCCGL
Trigger: AAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGC...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGCTGTCCTTGGTGGTCTaGCTCTTCTCAGAGAACAGT +
Preference number: 5 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGLSLVV*LFSENS
Trigger: ACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAG...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGACGACCCCGCCTGCTaGCTCCTCTGCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPDDPAC*LLCLGL
Trigger: CAGCCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 5 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp TTCCAGAAATGCAGAGGTATGCTGCTGCCACGGGGTAGGGGTGCGGGAGGCGGCTGGGCACTTTGTAGCTaGTCTGAGGGAAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: FQKCRGMLLPRGRGAGGGWALCS*SEGKAS
Trigger: AGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCA...GCCGCCTCCCGCACCCCTACCCCGTGGCAGCAGCATACCTCTGCATTTCTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTTTGTCCCCACTGGCTaGTTCGCCAGAAGCCACCCA +
Preference number: 5 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPFVPTG*FARSHP
Trigger: TGGGTGGCTTCTGGCGAACAAGCCAGTGGGGACAAA...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp CGAGGCGTAGCTGGTCAATGGTGTTCTCGGCCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTTCCTGGAGCTGATGGACCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: RGVAGQWCSRPQRTW*GACGSLPGADGPAQ
Trigger: CTGAGCTGGTCCATCAGCTCCAGGAAGACTACCACAGGCTCCTCACCAAGTACGCTGAGGCCGAGAACACCATTGACCAGCTACGCCTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp CATGCCCAAGAGCCATGGGGCTGGTGTTTCCATGGCCTTCCAAGCTaGGACCAGCCTCATACCCCAACCTTGAGGAGCTCTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: HAQEPWGWCFHGLPS*DQPHTPTLRSSLQP
Trigger: AGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAGGCTGGTCTCAGCTTGGAAGGCCATGGAAACACCAGCCCCATGGCTCTTGGGCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp TATCCGTGTCGTGCTCCGCCCAGTGCCTGGCAGATGGAAAGCAGTTaGTGTTATGAGAAAGCTGGGCGGACTGTGGCCTCCTCACCCAGC +
Preference number: 5 (lower is better)
Translates to: YPCRAPPSAWQMESS*CYEKAGRTVASSPS
Trigger: GCTGGGTGAGGAGGCCACAGTCCGCCCAGCTTTCTCATAACATCAACTGCTTTCCATCTGCCAGGCACTGGGCGGAGCACGACACGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 90 bp TTCTTGGGGTACCCTGGTGATAGGGTGGGCAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACTGCTCAACAGCACCTCCTGCACAAT +
Preference number: 5 (lower is better)
Translates to: FLGYPGDRVGRRRVL*QGCFSTAQQHLLHN
Trigger: ATTGTGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCTGCCCACCCTATCACCAGGGTACCCCAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 90 bp GTCTGGCCATCCAGCACTGCCCACCCCTCTCTTTCCATCCCGAGCTaGCTGTGGACTGTCCTTGGTGGTCTTGCTCTTCTCAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: VWPSSTAHPSLSIPS*LWTVLGGLALLREQ
Trigger: CTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAGAGAGGGGTGGGCAGTGCTGGATGGCCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS GCA 90 bp GTCACTAGGGTGGTCGAGGCTCACTGTCCCACTGCTCCAGGACCTTaGCGGGCTGAGTTCAACGGATGGGTTGACCTCGGAATGTTCAGA +
Preference number: 5 (lower is better)
Translates to: VTRVVEAHCPTAPGP*RAEFNGWVDLGMFR
Trigger: TCTGAACATTCCGAGGTCAACCCATCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCCTCGACCACCCTAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp AAGGCTTCTGTGGAAGGCGCTCAGAGATGCCGCTTCCCTCCAGGCTaGTCATACTACTTTGGTGGGATGCTGCGGACTTGGTGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: KASVEGAQRCRFPPG*SYYFGGMLRTWCLE
Trigger: CTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTCCACAGAAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 90 bp TGCCCACCCCTCTCTTTCCATCCCGAGCTGCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAGAGAACAGTGGTAGGGAGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: CPPLSFHPELPVDCP*WSCSSQRTVVGRAA
Trigger: AGCTGCCCTCCCTACCACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAGAGAGGGGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 90 bp GGTGCTGCTGGGCCAGGCGGAAGTCCTCTAGGAGCTCGGGGCTGGTaGCATTGGGAAAGAGTCTCTCTTCTTCCCAGCTTTGTGAACTAC +
Preference number: 5 (lower is better)
Translates to: GAAGPGGSPLGARGW*HWERVSLLPSFVNY
Trigger: GTAGTTCACAAAGCTGGGAAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAGAGGACTTCCGCCTGGCCCAGCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCATGCCCCCGGCCATACTaGGGGGCATTAGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPCPRPY*GALEEE
Trigger: CTCCTCTTCTAATGCCCCCAAGTATGGCCGGGGGCA...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGACCCGGGGCCCTACCTaGGAGAAATCAGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRTRGPT*EKSGSG
Trigger: CCCACTCCCTGATTTCTCCAAGGTAGGGCCCCGGGT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGAGCCGCTGGAAGCCCTaGACTTGGTCCTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRSRWKP*TWSWGM
Trigger: CATGCCCCAGGACCAAGTCAAGGGCTTCCAGCGGCT...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAATGGGATGCTGCGGACTaGGTGCCTGGAGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: ASWALCSLSEGKASAAIEWDAAD*VPGGWG
Trigger: ACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCA...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGCCGGAGAGGCCCACTaGGGCTGGAGAGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPAGEAH*GWRGTS
Trigger: AGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GAGCAGGCGGGACCTGTGCTGGAGGGAGACCCTCCTGGTGAGGAACTATGCGGGTGTTCAGAAATCCGTTaGTGCCCCTCAAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: EQAGPVLEGDPPGEELCGCSEIR*CPSNSE
Trigger: CTCAGAGTTTGAGGGGCACAAACGGATTTCTGAACA...CCCGCATAGTTCCTCACCAGGAGGGTCTCCCTCCAGCACAGGTCCCGCCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTTCTGCCTGGACCGAAGGAGGCCTCGCTCACAGCACCTCTGTGAGGGGACTGCTGTCCTTGGTGGTCTaGCTCTTCTCAGAGAACAGT +
Preference number: 5 (lower is better)
Translates to: GSAWTEGGLAHSTSVRGLLSLVV*LFSENS
Trigger: ACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAG...CAGTCCCCTCACAGAGGTGCTGTGAGCGAGGCCTCCTTCGGTCCAGGCAGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTGTGGGCGGCCACTaGGCAGCTGGTTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPAVGGH*AAGWAE
Trigger: CTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAGC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGCCCGGCTCAGGGCCTaGTTGAGCTCCTCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: ASWALCSLSEGKASAAIEARLRA*LSSSRS
Trigger: CGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCCTCATACCCCAACCTaGAGGAGCTCTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: PVTRRKVSGYALPSDACPPHTPT*RSSLQP
Trigger: AGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAGG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTTCAGTCAAAAGGGACTaGGCTAGGCAGCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLSVKRD*ARQPHL
Trigger: GAGGTGGGGCTGCCTAGCCAAGTCCCTTTTGACTGA...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATATGGGCAGATGGCCCATaGGAACCCCACTCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPIWADGP*EPHSPH
Trigger: ATGAGGAGAGTGGGGTTCCAATGGGCCATCTGCCCA...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCTAGGCAAGAGGCGGTaGCCTGGGCCAGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPLGKRR*PGPGQG
Trigger: GCCCTGTCCTGGCCCAGGCAACCGCCTCTTGCCTAG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS GCA 90 bp CAGCCGCTGGAAGCCCTTGACTTGGTCCTGGGGCATGAGACGTCCTaGCTGTATCAGTCTTTCAAAGGACTCCACCTTGGCCAGGAACTG +
Preference number: 5 (lower is better)
Translates to: QPLEALDLVLGHETS*LYQSFKGLHLGQEL
Trigger: CAGTTCCTGGCCAAGGTGGAGTCCTTTGAAAGACTGATACAGGCAGGACGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCAGCGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp CCTGGTGGCTTCATAGATACCATCTTCTCCGTGGCCTCCCTGGCATaGGAAGAGAAGACCATCCTTGAGTTCTGCCAGGCAGCCCTGACG +
Preference number: 5 (lower is better)
Translates to: PGGFIDTIFSVASLA*EEKTILEFCQAALT
Trigger: CGTCAGGGCTGCCTGGCAGAACTCAAGGATGGTCTTCTCTTCCCATGCCAGGGAGGCCACGGAGAAGATGGTATCTATGAAGCCACCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490767.1
CDS-3UTR CAA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTCAAAGGACTCCACCTaGGCCAGGAACTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LPVTRRKVSGYALPSDACSKDST*ARNWLA
Trigger: GGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTGA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCGGCTGGGCAGGGTGTaGCTCCCGACAAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPRLGRV*LPTSLQ
Trigger: CTGAAGGCTTGTCGGGAGCAACACCCTGCCCAGCCG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAATCCATCTGCAGCTCCTaGTGCCTGAGTCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: ASWALCSLSEGKASAAIESICSS*CLSRAR
Trigger: CCTGGCCCGACTCAGGCACAAGGAGCTGCAGATGGA...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACTGCTTTCCCTGGAGTaGCAGCCACCCCATCAACTT +
Preference number: 5 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPILLSLE*QPPHQL
Trigger: AAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCAG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCCTGCTTTCCCTGGAGTaGCAGCCACCCCATCAACTT +
Preference number: 5 (lower is better)
Translates to: PVTRRKVSGYALPSDACPLLSLE*QPPHQL
Trigger: AAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCAG...GGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGTGGGATGCTGCGGACTaGGTGCCTGGAGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPWDAAD*VPGGWG
Trigger: ACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCA...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGCTGGTCATACTACTTaGGTGGGATGCTGCGGACTT +
Preference number: 5 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPAGHTT*VGCCGL
Trigger: AAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCCGGAGAGGCCCACTaGGGCTGGAGAGGTACCTCT +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKAGEAH*GWRGTS
Trigger: AGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCGGGCTGATTGTCTTGTaGGGAAGGGGCTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPGLIVL*GRGCSE
Trigger: TTCTGAACAGCCCCTTCCCAACAAGACAATCAGCCC...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTATGCTTGCTCCTCTGCTaGGGGCTGGGAGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLCLLLC*GLGVED
Trigger: ATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCA...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTTGCTTGCTCCTCTGCTaGGGGCTGGGAGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLCLLLC*GLGVED
Trigger: ATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCA...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGTGCTGGGGGCGCTGTaGCCAGATACCACAGTCCGG +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPVLGAL*PDTTVR
Trigger: CCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCAC...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAACCGTAGGCCTTTCTaGTCTGGCCCCCTAAAGAGG +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLNRRPF*SGPLKR
Trigger: CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTT...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGTGGGCACTTTGTAGCTaGTCTGAGGGAAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPWALCS*SEGKAS
Trigger: AGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCA...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTCTCCGAGCTGGCCATaGGGGCTGGCCTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDSPSWP*GLAWAS
Trigger: TGAAGCCCAGGCCAGCCCCAATGGCCAGCTCGGAGA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAGAGGCTCATGGGAACTaGCTGGGCTGTCCACATCCT +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPEAHGN*LGCPHP
Trigger: AGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCTC...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCACCTCATACCCCAACCTaGAGGAGCTCTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPPHTPT*RSSLQP
Trigger: AGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAGG...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGGGAATTCCATGGGGGTaGCCCGAGCAACACTGCCTC +
Preference number: 5 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRGIPWG*PEQHCL
Trigger: GAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTCC...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp CACTGTCCCACTGCTCCAGGACCTTGCCGGGCTGAGTTCAACGGATaGGTTGACCTCGGAATGTTCAGAAAGTTTGTCCCCACTGGCTTG +
Preference number: 5 (lower is better)
Translates to: HCPTAPGPCRAEFNG*VDLGMFRKFVPTGL
Trigger: CAAGCCAGTGGGGACAAACTTTCTGAACATTCCGAGGTCAACCCATCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGTGGGACAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTGCCCCCGGCCATACTaGGGGGCATTAGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPCPRPY*GALEEE
Trigger: CTCCTCTTCTAATGCCCCCAAGTATGGCCGGGGGCA...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGACCCGGGGCCCTACCTaGGAGAAATCAGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPTRGPT*EKSGSG
Trigger: CCCACTCCCTGATTTCTCCAAGGTAGGGCCCCGGGT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCAGGAGGCGTGTCCTTaGCCAGGGCTGCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDQEACP*PGLLLH
Trigger: GTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCTG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGACCAGCTCAGTGGCTaGCTCAGGCGTCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVDQLSG*LRRLKF
Trigger: GAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGTCAGGGCAGGAGGTCTaGATGGCTGGCATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKSGQEV*MAGMGA
Trigger: AGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTGA...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTGCTTTCCCTGGAGTaGCAGCCACCCCATCAACTT +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLLSLE*QPPHQL
Trigger: AAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCTGTTCAGAAATCCGTTaGTGCCCCTCAAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEACSEIR*CPSNSE
Trigger: CTCAGAGTTTGAGGGGCACAAACGGATTTCTGAACA...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGCTGTCCTTGGTGGTCTaGCTCTTCTCAGAGAACAGT +
Preference number: 5 (lower is better)
Translates to: GVAHMQDQERLPEVLPGPLSLVV*LFSENS
Trigger: ACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAG...CGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCCTGTCCTTGGTGGTCTaGCTCTTCTCAGAGAACAGT +
Preference number: 5 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLSLVV*LFSENS
Trigger: ACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAG...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGTGCTTGCTCCTCTGCTaGGGGCTGGGAGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVCLLLC*GLGVED
Trigger: ATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCA...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTTGGGCACTTTGTAGCTaGTCTGAGGGAAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLWALCS*SEGKAS
Trigger: AGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCA...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CACATGCAGGACCAGGAGAGACTGCCTGAGGTTCTGCCTGGACCGAAGGAGGCCGAATGTTCAGAAAGTTaGTCCCCACTGGCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: HMQDQERLPEVLPGPKEAECSES*SPLACS
Trigger: CGAACAAGCCAGTGGGGACAAACTTTCTGAACATTC...GGCCTCCTTCGGTCCAGGCAGAACCTCAGGCAGTCTCTCCTGGTCCTGCATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTCTGCCTGTGAATTCTTaGTTCCAAACCCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLLPVNS*FQTQGA
Trigger: GGCTCCCTGGGTTTGGAACAAAGAATTCACAGGCAG...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374088.8
CDS TCA 90 bp GGGGCTGGTGGCATTGGGAAAGAGTCTCTCTTCTTCCCAGCTTTGTaGACTACTTCTATCCACATCCCTCTTGTCCTCGGCCCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: GAGGIGKESLFFPAL*TTSIHIPLVLGPGP
Trigger: TGGGCCTGGGCCGAGGACAAGAGGGATGTGGATAGAAGTAGTTCACAAAGCTGGGAAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS TCA 90 bp ATGGAGCAGAATGTGCCTCTGGCCTCTTGCCTTGTCCCCAGAATCTaGGGTCAGCAGCCCTCCCTCTTCTGCAAGGTGTCTGTGAGAGAT +
Preference number: 5 (lower is better)
Translates to: MEQNVPLASCLVPRI*GQQPSLFCKVSVRD
Trigger: ATCTCTCACAGACACCTTGCAGAAGAGGGAGGGCTGCTGACCTCAGATTCTGGGGACAAGGCAAGAGGCCAGAGGCACATTCTGCTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 90 bp CTCTCTTTCCATCCCGAGCTGCCTGTGGACTGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTGGTAGGGAGGGCAGCTCAGATTCTG +
Preference number: 5 (lower is better)
Translates to: LSFHPELPVDCPWWS*SSQRTVVGRAAQIL
Trigger: CAGAATCTGAGCTGCCCTCCCTACCACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 90 bp AATGTTCCTGCTGTGCTGATGTGGGAGAGCCGGTGCTCTGGAGTCTaGGTGAGGGGTGAAACTCTGCTTGTTTCTGAGCCCACAAAGCCA +
Preference number: 5 (lower is better)
Translates to: NVPAVLMWESRCSGV*VRGETLLVSEPTKP
Trigger: TGGCTTTGTGGGCTCAGAAACAAGCAGAGTTTCACCCCTCACCCAGACTCCAGAGCACCGGCTCTCCCACATCAGCACAGCAGGAACATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CCA 90 bp GCTGGGCCAGGCGGAAGTCCTCTAGGAGCTCGGGGCTGGTGGCATTaGGAAAGAGTCTCTCTTCTTCCCAGCTTTGTGAACTACTTCTAT +
Preference number: 5 (lower is better)
Translates to: AGPGGSPLGARGWWH*ERVSLLPSFVNYFY
Trigger: ATAGAAGTAGTTCACAAAGCTGGGAAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAGAGGACTTCCGCCTGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CCA 90 bp CTACTGTCGTTTCTAACTCCTTGGCCTCTGTCCACTCCCTCGTTATaGTCCATGGAGCAGAATGTGCCTCTGGCCTCTTGCCTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LLSFLTPWPLSTPSL*SMEQNVPLASCLVP
Trigger: GGGGACAAGGCAAGAGGCCAGAGGCACATTCTGCTCCATGGACCATAACGAGGGAGTGGACAGAGGCCAAGGAGTTAGAAACGACAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGTGCCCCCGGCCATACTaGGGGGCATTAGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKCPRPY*GALEEE
Trigger: CTCCTCTTCTAATGCCCCCAAGTATGGCCGGGGGCA...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGTCAAAGGACTCCACCTaGGCCAGGAACTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKSKDST*ARNWLA
Trigger: GGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTGA...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGCTGGAAGCCCTTGACTaGGTCCTGGGGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPLEALD*VLGHET
Trigger: CGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCAG...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGAGGCCATGGTAAACTaGCTCCATCTGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVEAMVN*LHLQLL
Trigger: AAGGAGCTGCAGATGGAGCAAGTTTACCATGGCCTC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGGGGCTGATTGTCTTGTaGGGAAGGGGCTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVGLIVL*GRGCSE
Trigger: TTCTGAACAGCCCCTTCCCAACAAGACAATCAGCCC...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGTTCGTGGCCTGTGTATaGGCCCCGGAAGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKFVACV*APEGDP
Trigger: AGGGTCACCTTCCGGGGCCAATACACAGGCCACGAA...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACTTCGTGGCCTGTGTATaGGCCCCGGAAGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDFVACV*APEGDP
Trigger: AGGGTCACCTTCCGGGGCCAATACACAGGCCACGAA...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GCATCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 5 (lower is better)
Translates to: ASWALCSLSEGKASAAIEGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...TTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCAGTTCAACGGATGGGTaGACCTCGGAATGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPSSTDG*TSECSE
Trigger: TTCTGAACATTCCGAGGTCAACCCATCCGTTGAACT...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCTCTCCCAAACCAGTTaGGGCAGATGGCCCATTGGA +
Preference number: 5 (lower is better)
Translates to: LPVTRRKVSGYALPSDACLSQTS*GRWPIG
Trigger: TCCAATGGGCCATCTGCCCAAACTGGTTTGGGAGAG...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTTGGGCCTGAATTGTTaGAGCAATTCCACGTGTGCA +
Preference number: 5 (lower is better)
Translates to: QVGDRFAPETVGLSCLAPLGLNC*SNSTCA
Trigger: TGCACACGTGGAATTGCTCAAACAATTCAGGCCCAA...GGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS TCA 90 bp CCTCCTGCCTTACCCACCCCTGAGTTTCAAATAAGGCCTTCTGGGTaGCACCTGAAGCCACTGTGGAGCGGTCTCATCATCTCATTTCCC +
Preference number: 5 (lower is better)
Translates to: PPALPTPEFQIRPSG*HLKPLWSGLIISFP
Trigger: GGGAAATGAGATGATGAGACCGCTCCACAGTGGCTTCAGGTGTCACCCAGAAGGCCTTATTTGAAACTCAGGGGTGGGTAAGGCAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 90 bp GAGACACAGGGGCCCTCTGGAAATGAGAACCTGAAGGAAGCCAGGTaGAAATGGGACATCCAATTCAGTGTCCACCCTGTATGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: ETQGPSGNENLKEAR*KWDIQFSVHPVCSE
Trigger: CTCGGAGCATACAGGGTGGACACTGAATTGGATGTCCCATTTGCACCTGGCTTCCTTCAGGTTCTCATTTCCAGAGGGCCCCTGTGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CCA 90 bp CCGGTGAGCTTGGAGGTGTTCCTGCTACTGTCGTTTCTAACTCCTTaGCCTCTGTCCACTCCCTCGTTATGGTCCATGGAGCAGAATGTG +
Preference number: 5 (lower is better)
Translates to: PVSLEVFLLLSFLTP*PLSTPSLWSMEQNV
Trigger: CACATTCTGCTCCATGGACCATAACGAGGGAGTGGACAGAGGCCAAGGAGTTAGAAACGACAGTAGCAGGAACACCTCCAAGCTCACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAACTGGAAGCCCTTGACTaGGTCCTGGGGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKLEALD*VLGHET
Trigger: CGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCAG...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCGGCTGGGCAGGGTGTaGCTCCCGACAAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPRLGRV*LPTSLQ
Trigger: CTGAAGGCTTGTCGGGAGCAACACCCTGCCCAGCCG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCGAGGCCATGGTAAACTaGCTCCATCTGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LPVTRRKVSGYALPSDACEAMVN*LHLQLL
Trigger: AAGGAGCTGCAGATGGAGCAAGTTTACCATGGCCTC...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCGCCTGTGGACTGTCCTaGGTGGTCTTGCTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: LKCPTDYQSLGERSPAMPACGLS*VVLLFS
Trigger: TGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGC...GGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAATTCGTGGCCTGTGTATaGGCCCCGGAAGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKFVACV*APEGDP
Trigger: AGGGTCACCTTCCGGGGCCAATACACAGGCCACGAA...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCTGGGCACTTTGTAGCTaGTCTGAGGGAAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LPVTRRKVSGYALPSDACWALCS*SEGKAS
Trigger: AGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCA...GCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGGGGGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAGTTCAACGGATGGGTaGACCTCGGAATGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: GGGQVCSRNRRPFLSGPLSSTDG*TSECSE
Trigger: TTCTGAACATTCCGAGGTCAACCCATCCGTTGAACT...TAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCCCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GGTGCTCCTGGGAAGTCACTTCTCTTGGTGACCGAGCTGACACCCCCTCCACTTAGTTCAACGGATGGGTaGACCTCGGAATGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: GAPGKSLLLVTELTPPPLSSTDG*TSECSE
Trigger: TTCTGAACATTCCGAGGTCAACCCATCCGTTGAACT...AAGTGGAGGGGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCCAGGAGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS TCA 90 bp AGGTCCTGTTTCCTGAGACACAGGGGCCCTCTGGAAATGAGAACCTaGAGGAAGCCAGGTGCAAATGGGACATCCAATTCAGTGTCCACC +
Preference number: 5 (lower is better)
Translates to: RSCFLRHRGPLEMRT*RKPGANGTSNSVST
Trigger: GGTGGACACTGAATTGGATGTCCCATTTGCACCTGGCTTCCTTCAGGTTCTCATTTCCAGAGGGCCCCTGTGTCTCAGGAAACAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CCA 90 bp GCCTTTTGGGACCGCCTTAGGGGACAGAACATGGTATTCGTGGCCTaGGGAAAGAAACCAGAACTGTCAGTATCAGCCCTGTGGATGGAT +
Preference number: 5 (lower is better)
Translates to: AFWDRLRGQNMVFVA*GKKPELSVSALWMD
Trigger: ATCCATCCACAGGGCTGATACTGACAGTTCTGGTTTCTTTCCCCAGGCCACGAATACCATGTTCTGTCCCCTAAGGCGGTCCCAAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGATCTCAGCTGGAGACTaGAAGATGAGGGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPISAGD*KMRGLA
Trigger: TGCCAGGCCCCTCATCTTCAAGTCTCCAGCTGAGAT...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAGCACCGGGCACTGCCTaGGGAGGACCCTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVAPGTA*GGPWWP
Trigger: AGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTGC...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp GGACAGGTTTGCTCCAGAAACCGTAGGCCTTTCTTGTCTGGCCCCCTAAAGAGGCTGTCCTTGGTGGTCTaGCTCTTCTCAGAGAACAGT +
Preference number: 5 (lower is better)
Translates to: GQVCSRNRRPFLSGPLKRLSLVV*LFSENS
Trigger: ACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAG...CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTTTCTGGAGCAAACCTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGCCTGTGGACTGTCCTaGGTGGTCTTGCTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKACGLS*VVLLFS
Trigger: TGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACGCCTGTGGACTGTCCTaGGTGGTCTTGCTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDACGLS*VVLLFS
Trigger: TGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGC...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCTGACATCCTAAAATGCCCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGTGCTTGCTCCTCTGCTaGGGGCTGGGAGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: PDILKCPTDYQSLGERSPCLLLC*GLGVED
Trigger: ATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCA...CGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGGGCATTTTAGGATGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAAGGGAAGTCACTTCTCTaGGTGACCGAGCTGACACCC +
Preference number: 5 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKGKSLL*VTELTP
Trigger: GGGTGTCAGCTCGGTCACCAAGAGAAGTGACTTCCC...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCAACAGGTCCCCTGGGAAAGGGCTTGGCTGGGCATCAAACCTACCACCCCATACTTGTAGACAGCAACTaGCTGTGTGCCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: PTGPLGKGLAGHQTYHPILVDSN*LCASFT
Trigger: TGTAAATGAGGCACACAGCAAGTTGCTGTCTACAAG...TATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCCTTTCCCAGGGGACCTGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS CCA 90 bp TTGTCTGCTTCCAGATGTGTTCCTTGGGCTGAGGGCAGAAGAATCTaGTCGTTTCTCTCCTCCATCTATCTGTGGCATGCTGCGGACTCT +
Preference number: 5 (lower is better)
Translates to: LSASRCVPWAEGRRI*SFLSSIYLWHAADS
Trigger: AGAGTCCGCAGCATGCCACAGATAGATGGAGGAGAGAAACGACCAGATTCTTCTGCCCTCAGCCCAAGGAACACATCTGGAAGCAGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGGGGTGAAACTCTGCTaGTTTCTGAGCCCACAAAGC +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKGVKLC*FLSPQS
Trigger: GCTTTGTGGGCTCAGAAACAAGCAGAGTTTCACCCC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGGGGCTGATTGTCTTGTaGGGAAGGGGCTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKGLIVL*GRGCSE
Trigger: TTCTGAACAGCCCCTTCCCAACAAGACAATCAGCCC...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTTTCGTGGCCTGTGTATaGGCCCCGGAAGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPFVACV*APEGDP
Trigger: AGGGTCACCTTCCGGGGCCAATACACAGGCCACGAA...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGAATTCCATGGGGGTaGCCCGAGCAACACTGCCTC +
Preference number: 5 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPGIPWG*PEQHCL
Trigger: GAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTCC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGCTTGTAGACAGCAACTaGCTGTGTGCCTCATTTACA +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVLVDSN*LCASFT
Trigger: TGTAAATGAGGCACACAGCAAGTTGCTGTCTACAAG...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGATGCTTGCCCCAAATGGCAGGTGCTGTTaGCTACTGAAAGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: QSLGERSPAMPFPVMLAPNGRCC*LLKVLE
Trigger: TTCCAGTACTTTCAGTAGCAAACAGCACCTGCCATT...TGGGGCAAGCATCACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp CCCACTGACTACCAGTCACTAGGAGAAAGGTCTCCGGCTATGCCCTTCCCAGTGAAAGTTGGGCCTGAATaGTTTGAGCAATTCCACGTG +
Preference number: 5 (lower is better)
Translates to: PTDYQSLGERSPAMPFPVKVGPE*FEQFHV
Trigger: CACGTGGAATTGCTCAAACAATTCAGGCCCAACTTT...CACTGGGAAGGGCATAGCCGGAGACCTTTCTCCTAGTGACTGGTAGTCAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAAGCCCCCTGTCTCCATaGCGCCCTGGCCCACCTCCA +
Preference number: 5 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVSPLSP*RPGPPP
Trigger: TGGAGGTGGGCCAGGGCGCAATGGAGACAGGGGGCT...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGAGAACAGGTTCACCTaGGCCCCGAGGCGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLENRFT*APRRSW
Trigger: CCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCTC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGACGACCCCGCCTGCTaGCTCCTCTGCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERDDPAC*LLCLGL
Trigger: CAGCCCCAAGCAGAGGAGCAAGCAGGCGGGGTCGTC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGAGCTGTGGGCGGCCACTaGGCAGCTGGTTGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERAVGGH*AAGWAE
Trigger: CTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAGC...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GGGCTTGGCTGGGCATCAAACCTACCACCCCATAAACTTGACATTGAAGGCAAATGGGCACTTTGTAGCTaGTCTGAGGGAAAGGCCTCT +
Preference number: 5 (lower is better)
Translates to: GLGWASNLPPHKLDIEGKWALCS*SEGKAS
Trigger: AGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCA...TTTGCCTTCAATGTCAAGTTTATGGGGTGGTAGGTTTGATGCCCAGCCAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS GCA 90 bp CCTGAAGCCACTGTGGAGCGGTCTCATCATCTCATTTCCCTCCTGTaGTGTTCTGGCTTTGTGTATGTGGAGCTGAACGTAATTGCTCTT +
Preference number: 5 (lower is better)
Translates to: PEATVERSHHLISLL*CSGFVYVELNVIAL
Trigger: AAGAGCAATTACGTTCAGCTCCACATACACAAAGCCAGAACAGCACAGGAGGGAAATGAGATGATGAGACCGCTCCACAGTGGCTTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTACCCGGGGCCCTACCTaGGAGAAATCAGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: LIHSDSDHPCGFRVETNITRGPT*EKSGSG
Trigger: CCCACTCCCTGATTTCTCCAAGGTAGGGCCCCGGGT...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTATCTCAGCTGGAGACTaGAAGATGAGGGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPISAGD*KMRGLA
Trigger: TGCCAGGCCCCTCATCTTCAAGTCTCCAGCTGAGAT...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCAGGAGGCGTGTCCTTaGCCAGGGCTGCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFQEACP*PGLLLH
Trigger: GTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCTG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGACCAGCTCAGTGGCTaGCTCAGGCGTCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPDQLSG*LRRLKF
Trigger: GAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGAGAACAGGTTCACCTaGGCCCCGAGGCGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFENRFT*APRRSW
Trigger: CCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCTC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCTGGAAGCCCTTGACTaGGTCCTGGGGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLLEALD*VLGHET
Trigger: CGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCAG...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAAGCCGCTGGAAGCCCTaGACTTGGTCCTGGGGCATG +
Preference number: 5 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVSRWKP*TWSWGM
Trigger: CATGCCCCAGGACCAAGTCAAGGGCTTCCAGCGGCT...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTCTTCCAGGCGTCCCCTaGGAGCCGGCAAGCGGCTGG +
Preference number: 5 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTLPGVP*EPASGW
Trigger: CCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAG...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGGGCGGCTCAGGCTCTaGCTGGGTCTGGTCTATGTG +
Preference number: 5 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFGRLRL*LGLVYV
Trigger: CACATAGACCAGACCCAGCAAGAGCCTGAGCCGCCC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGGCTGGCATGGGGGCTaGTCCAGAAGGAGCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQGWHGG*SRRSRQ
Trigger: CTGCCTGCTCCTTCTGGACAAGCCCCCATGCCAGCC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTTCCATCTGCAGCTCCTaGTGCCTGAGTCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LIHSDSDHPCGFRVETNISICSS*CLSRAR
Trigger: CCTGGCCCGACTCAGGCACAAGGAGCTGCAGATGGA...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTGGGATGCTGCGGACTaGGTGCCTGGAGGGTGGGGT +
Preference number: 5 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCWDAAD*VPGGWG
Trigger: ACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCA...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGTGCTGGGGGCGCTGTaGCCAGATACCACAGTCCGG +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVVLGAL*PDTTVR
Trigger: CCGGACTGTGGTATCTGGCAACAGCGCCCCCAGCAC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCCGGCTCAGGGCCTTGTaGAGCTCCTCTAGGTCGCCC +
Preference number: 5 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCRLRAL*SSSRSP
Trigger: GGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCG...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGCCCGGCTCAGGGCCTaGTTGAGCTCCTCTAGGTCG +
Preference number: 5 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCARLRA*LSSSRS
Trigger: CGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACATCTCCGAGCTGGCCATaGGGGCTGGCCTGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTSPSWP*GLAWAS
Trigger: TGAAGCCCAGGCCAGCCCCAATGGCCAGCTCGGAGA...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS GCA 90 bp GCCTCTGGAAAGACAGGCCATTCACTTCTTAGCATATACCAGCTCTaGACCCACCTTGTAACTTACCCTAAGTCACTTCAACTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: ASGKTGHSLLSIYQL*THLVTYPKSLQLSG
Trigger: GCCAGAGAGTTGAAGTGACTTAGGGTAAGTTACAAGGTGGGTGCAGAGCTGGTATATGCTAAGAAGTGAATGGCCTGTCTTTCCAGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374075.9
CDS GCA 90 bp AAGCACTTGAAATGCTACCATGTGTCATCTCAAGTCTTTACTCTGTaGCAGGTCCTGTTTCCTGAGACACAGGGGCCCTCTGGAAATGAG +
Preference number: 5 (lower is better)
Translates to: KHLKCYHVSSQVFTL*QVLFPETQGPSGNE
Trigger: CTCATTTCCAGAGGGCCCCTGTGTCTCAGGAAACAGGACCTGGCACAGAGTAAAGACTTGAGATGACACATGGTAGCATTTCAAGTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCTGCCCCCGGCCATACTaGGGGGCATTAGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFCPRPY*GALEEE
Trigger: CTCCTCTTCTAATGCCCCCAAGTATGGCCGGGGGCA...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACAGGAGGCGTGTCCTTaGCCAGGGCTGCTTCTCCAC +
Preference number: 5 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERQEACP*PGLLLH
Trigger: GTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCTG...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGAGAACAGGTTCACCTaGGCCCCGAGGCGTAGCTGG +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVENRFT*APRRSW
Trigger: CCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCTC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACCGGCTGGGCAGGGTGTaGCTCCCGACAAGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHRLGRV*LPTSLQ
Trigger: CTGAAGGCTTGTCGGGAGCAACACCCTGCCCAGCCG...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGGGCGGCTCAGGCTCTaGCTGGGTCTGGTCTATGTG +
Preference number: 5 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCGRLRL*LGLVYV
Trigger: CACATAGACCAGACCCAGCAAGAGCCTGAGCCGCCC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTCCATCTGCAGCTCCTaGTGCCTGAGTCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCSICSS*CLSRAR
Trigger: CCTGGCCCGACTCAGGCACAAGGAGCTGCAGATGGA...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTGGGGTGAAACTCTGCTaGTTTCTGAGCCCACAAAGC +
Preference number: 5 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPGVKLC*FLSPQS
Trigger: GCTTTGTGGGCTCAGAAACAAGCAGAGTTTCACCCC...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGGAGGCTCATGGGAACTaGCTGGGCTGTCCACATCCT +
Preference number: 5 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLEAHGN*LGCPHP
Trigger: AGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCTC...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGTTTGTCCCCACTGGCTaGTTCGCCAGAAGCCACCCA +
Preference number: 5 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLFVPTG*FARSHP
Trigger: TGGGTGGCTTCTGGCGAACAAGCCAGTGGGGACAAA...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACAATGGCAGGTGCTGTTaGCTACTGAAAGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDNGRCC*LLKVLE
Trigger: TTCCAGTACTTTCAGTAGCAAACAGCACCTGCCATT...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp TCCTGGGCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGAAAGTTGGGCCTGAATaGTTTGAGCAATTCCACGTG +
Preference number: 5 (lower is better)
Translates to: SWALCSLSEGKASAAIEKKVGPE*FEQFHV
Trigger: CACGTGGAATTGCTCAAACAATTCAGGCCCAACTTT...CTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCCCCCGGCCATACTaGGGGGCATTAGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVCPRPY*GALEEE
Trigger: CTCCTCTTCTAATGCCCCCAAGTATGGCCGGGGGCA...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACACTGGAAGCCCTTGACTaGGTCCTGGGGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTLEALD*VLGHET
Trigger: CGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCAG...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTACTGGAAGCCCTTGACTaGGTCCTGGGGCATGAGACG +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVLEALD*VLGHET
Trigger: CGTCTCATGCCCCAGGACCAAGTCAAGGGCTTCCAG...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGAACCGTAGGCCTTTCTaGTCTGGCCCCCTAAAGAGG +
Preference number: 5 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLNRRPF*SGPLKR
Trigger: CCTCTTTAGGGGGCCAGACAAGAAAGGCCTACGGTT...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTAGAGGCTCATGGGAACTaGCTGGGCTGTCCACATCCT +
Preference number: 5 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVEAHGN*LGCPHP
Trigger: AGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCTC...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAAGGAATTCCATGGGGGTaGCCCGAGCAACACTGCCTC +
Preference number: 5 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQGIPWG*PEQHCL
Trigger: GAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTCC...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS TCA 90 bp TTCTCCAGACTCCTATTCTGTTTCATCTCAGATCCTAGAACCAGCTaGCATCCAGTAGCAACCAACACACCCAGGCTAAGTCAGGATTTG +
Preference number: 5 (lower is better)
Translates to: FSRLLFCFISDPRTS*HPVATNTPRLSQDL
Trigger: CAAATCCTGACTTAGCCTGGGTGTGTTGGTTGCTACTGGATGTCAGCTGGTTCTAGGATCTGAGATGAAACAGAATAGGAGTCTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp CTTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTATCTCAGCTGGAGACTaGAAGATGAGGGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LIHSDSDHPCGFRVETNIISAGD*KMRGLA
Trigger: TGCCAGGCCCCTCATCTTCAAGTCTCCAGCTGAGAT...AATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACTCAAAGGACTCCACCTaGGCCAGGAACTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHSKDST*ARNWLA
Trigger: GGCCAGCCAGTTCCTGGCCAAGGTGGAGTCCTTTGA...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTTCAGGGCAGGAGGTCTaGATGGCTGGCATGGGGGCT +
Preference number: 5 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTSGQEV*MAGMGA
Trigger: AGCCCCCATGCCAGCCATCAAGACCTCCTGCCCTGA...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCCTGCTTTCCCTGGAGTaGCAGCCACCCCATCAACTT +
Preference number: 5 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFLLSLE*QPPHQL
Trigger: AAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCAG...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp ATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTACCCAATTTGTCCCCACTGGCTaGTTCGCCAGAAGCCACCCA +
Preference number: 5 (lower is better)
Translates to: MFFNTACVLLKIMSHTTQFVPTG*FARSHP
Trigger: TGGGTGGCTTCTGGCGAACAAGCCAGTGGGGACAAA...TTGGGTAGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATCAGTCAAAAGGGACTaGGCTAGGCAGCCCCACCTC +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVSVKRD*ARQPHL
Trigger: GAGGTGGGGCTGCCTAGCCAAGTCCCTTTTGACTGA...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS TCA 90 bp CTGAGGTCAGCAGCCCTCCCTCTTCTGCAAGGTGTCTGTGAGAGATaGTGCCTTTACTATAATTACCTATTGGTTATCATCTTCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LRSAALPLLQGVCER*CLYYNYLLVIIFSA
Trigger: AGCAGAGAAGATGATAACCAATAGGTAATTATAGTAAAGGCATCATCTCTCACAGACACCTTGCAGAAGAGGGAGGGCTGCTGACCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 90 bp CTGGGGAAAGAAACCAGAACTGTCAGTATCAGCCCTGTGGATGGATaGAAAATAGAGGAAGATTCTGGAATAATGATCTCCTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LGKETRTVSISPVDG*KIEEDSGIMISSSS
Trigger: GGAGGAAGAGGAGATCATTATTCCAGAATCTTCCTCTATTTTGCATCCATCCACAGGGCTGATACTGACAGTTCTGGTTTCTTTCCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CCA 90 bp TGGCCTGGGGAAAGAAACCAGAACTGTCAGTATCAGCCCTGTGGATaGATGCAAAATAGAGGAAGATTCTGGAATAATGATCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: WPGERNQNCQYQPCG*MQNRGRFWNNDLLF
Trigger: GAAGAGGAGATCATTATTCCAGAATCTTCCTCTATTTTGCATCCATCCACAGGGCTGATACTGACAGTTCTGGTTTCTTTCCCCAGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAATCTCAGCTGGAGACTaGAAGATGAGGGGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVISAGD*KMRGLA
Trigger: TGCCAGGCCCCTCATCTTCAAGTCTCCAGCTGAGAT...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTGCTTGCTCCTCTGCTaGGGGCTGGGAGTTGAAGAT +
Preference number: 5 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCCLLLC*GLGVED
Trigger: ATCTTCAACTCCCAGCCCCAAGCAGAGGAGCAAGCA...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS-3UTR CAA 90 bp GCACTTTGTAGCTTGTCTGAGGGAAAGGCCTCTGCTGCCATAGAAAAGCTGGACCCCATAAACTTGACATaGAAGGCAAAAGTTAATGAC +
Preference number: 5 (lower is better)
Translates to: ALCSLSEGKASAAIEKLDPINLT*KAKVND
Trigger: GTCATTAACTTTTGCCTTCAATGTCAAGTTTATGGG...GTCCAGCTTTTCTATGGCAGCAGAGGCCTTTCCCTCAGACAAGCTACAAAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp ACTGAAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTACTGCCTGTGAATTCTTaGTTCCAAACCCAGGGAGCC +
Preference number: 5 (lower is better)
Translates to: TENHVPHYPKSFQGLSVVLPVNS*FQTQGA
Trigger: GGCTCCCTGGGTTTGGAACAAAGAATTCACAGGCAG...TACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCGAGGCCATGGTAAACTaGCTCCATCTGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCEAMVN*LHLQLL
Trigger: AAGGAGCTGCAGATGGAGCAAGTTTACCATGGCCTC...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGCTGGTCATACTACTTaGGTGGGATGCTGCGGACTT +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVAGHTT*VGCCGL
Trigger: AAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGGGGTGAAACTCTGCTaGTTTCTGAGCCCACAAAGC +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVGVKLC*FLSPQS
Trigger: GCTTTGTGGGCTCAGAAACAAGCAGAGTTTCACCCC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp ATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGTGTTCAGAAATCCGTTaGTGCCCCTCAAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: IKYLLLAGVAHMQDQERLCSEIR*CPSNSE
Trigger: CTCAGAGTTTGAGGGGCACAAACGGATTTCTGAACA...CAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTCCTCATACCCCAACCTaGAGGAGCTCTCTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTPHTPT*RSSLQP
Trigger: AGGCTGGAGAGAGCTCCTCAAGGTTGGGGTATGAGG...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AAAATCATGTCCCACACTACCCAAAATCATTTCAAGGGCTATCAGTGGTATACATGGGGCTTTGCCGTTTaGCTCAGGCTAGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: KIMSHTTQNHFKGYQWYTWGFAV*LRLVLN
Trigger: GTTCAAGACTAGCCTGAGCAAAACGGCAAAGCCCCA...TGTATACCACTGATAGCCCTTGAAATGATTTTGGGTAGTGTGGGACATGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTGACCAGCTCAGTGGCTaGCTCAGGCGTCTGAAATTC +
Preference number: 5 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTDQLSG*LRRLKF
Trigger: GAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTC...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp CTGAGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACGAGGCCATGGTAAACTaGCTCCATCTGCAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: LRIMFFNTACVLLKIMSHEAMVN*LHLQLL
Trigger: AAGGAGCTGCAGATGGAGCAAGTTTACCATGGCCTC...GTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp TTATTCACTCTGACAGTGATCATCCCTGTGGTTTTAGGGTGGAAACAAACATTCGAATGTTCAGAAAGTTaGTCCCCACTGGCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: LFTLTVIIPVVLGWKQTFECSES*SPLACS
Trigger: CGAACAAGCCAGTGGGGACAAACTTTCTGAACATTC...GAATGTTTGTTTCCACCCTAAAACCACAGGGATGATCACTGTCAGAGTGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTTACCACCCCATAAACTaGACATTGAAGGCAAAAGTT +
Preference number: 5 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPYHPIN*TLKAKV
Trigger: AACTTTTGCCTTCAATGTCAAGTTTATGGGGTGGTA...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS TCA 90 bp GCCACCACACCCAACCCATATTTTTGTGTTAATGTTATAAGCACTTaGAATGCTACCATGTGTCATCTCAAGTCTTTACTCTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: ATTPNPYFCVNVIST*NATMCHLKSLLCAR
Trigger: CCTGGCACAGAGTAAAGACTTGAGATGACACATGGTAGCATTTCAAGTGCTTATAACATTAACACAAAAATATGGGTTGGGTGTGGTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS-3UTR CAA 90 bp AATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTATGCTGCTGTTCAGAAATCCGTTaGTGCCCCTCAAACTCTGAG +
Preference number: 5 (lower is better)
Translates to: NIQTSLMHTHSRNAEVCCCSEIR*CPSNSE
Trigger: CTCAGAGTTTGAGGGGCACAAACGGATTTCTGAACA...GCAGCATACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp GCCTCAAATATACAAACATCATTGATGCACACACATTCCAGAAATGCAGAGGTAGAATGTTCAGAAAGTTaGTCCCCACTGGCTTGTTCG +
Preference number: 5 (lower is better)
Translates to: ASNIQTSLMHTHSRNAEVECSES*SPLACS
Trigger: CGAACAAGCCAGTGGGGACAAACTTTCTGAACATTC...TACCTCTGCATTTCTGGAATGTGTGTGCATCAATGATGTTTGTATATTTGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS-3UTR CAA 90 bp AAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGACTGCCTCCCATAAACTTGACATaGAAGGCAAAAGTTAATGAC +
Preference number: 5 (lower is better)
Translates to: KYLLLAGVAHMQDQERLPPINLT*KAKVND
Trigger: GTCATTAACTTTTGCCTTCAATGTCAAGTTTATGGG...AGGCAGTCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp TATATAAAATACCTATTATTAGCTGGAGTTGCACACATGCAGGACCAGGAGAGATTGGGCCTGAATTGTTaGAGCAATTCCACGTGTGCA +
Preference number: 5 (lower is better)
Translates to: YIKYLLLAGVAHMQDQERLGLNC*SNSTCA
Trigger: TGCACACGTGGAATTGCTCAAACAATTCAGGCCCAA...TCTCTCCTGGTCCTGCATGTGTGCAACTCCAGCTAATAATAGGTATTTTATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307564.8
ENST00000374088.8
CDS-3UTR CAA 90 bp AGAATAATGTTCTTTAATACTGCATGTGTCCTACTGAAAATCATGTCCCACACTAGTTCAACGGATGGGTaGACCTCGGAATGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: RIMFFNTACVLLKIMSHTSSTDG*TSECSE
Trigger: TTCTGAACATTCCGAGGTCAACCCATCCGTTGAACT...AGTGTGGGACATGATTTTCAGTAGGACACATGCAGTATTAAAGAACATTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS GCA 72 bp CCGGCCGCGGGTCCGGGCGGGGCGGTCAAAGGCAGATaGTGGGCGTGTCGGGCTGCCCTGGAGTGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: PAAGPGGAVKGR*WACRAALEWLV
Trigger: CACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGCCCCGCCCGGACCCGCGGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS CCA 72 bp GCCGCGGGTCCGGGCGGGGCGGTCAAAGGCAGATGCTaGGCGTGTCGGGCTGCCCTGGAGTGGCTGGTGCAG +
Preference number: 6 (lower is better)
Translates to: AAGPGGAVKGRC*ACRAALEWLVQ
Trigger: CTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGACCGCCCCGCCCGGACCCGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS GCA 72 bp GGCCTGGGGGTCCTCGGCCGGGCCCGGCCACCACTCTaGAGAGCGGGGCTGTGGGATGGTGAAGGACAAGAC +
Preference number: 6 (lower is better)
Translates to: GLGVLGRARPPL*RAGLWDGEGQD
Trigger: GTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGCCCGGCCGAGGACCCCCAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp TGCGGGTGTGGGTCCCACTCCAGGGGCGGCAGGTGCTaGTGGGCCAGGCGGAAGTCCTCTAGGAGCTCGGGG +
Preference number: 6 (lower is better)
Translates to: CGCGSHSRGGRC*WARRKSSRSSG
Trigger: CCCCGAGCTCCTAGAGGACTTCCGCCTGGCCCAGCAGCACCTGCCGCCCCTGGAGTGGGACCCACACCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CCA 72 bp GGCCGGGCCCGGCCACCACTCTGCAGAGCGGGGCTGTaGGATGGTGAAGGACAAGACCTTGGTCCCCTGGGG +
Preference number: 6 (lower is better)
Translates to: GRARPPLCRAGL*DGEGQDLGPLG
Trigger: CCCCAGGGGACCAAGGTCTTGTCCTTCACCATCCCACAGCCCCGCTCTGCAGAGTGGTGGCCGGGCCCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp CAGGTCGAGCTGGATGGAGTGCCGGTGTCTCCGGGCTaGTGGGGGAGAGGCTGTGGGCGGCCACTTGGCAGC +
Preference number: 6 (lower is better)
Translates to: QVELDGVPVSPG*WGRGCGRPLGS
Trigger: GCTGCCAAGTGGCCGCCCACAGCCTCTCCCCCACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGACCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CAA 90 bp GAGCGGACGCTCTCGGCAGCCTGCACGGCCCGGCTCAGGGCCTTGTaGAGCTCCTCTAGGTCGCCCAGGTCGAGCTGGATGGAGTGCCGG +
Preference number: 6 (lower is better)
Translates to: ERTLSAACTARLRAL*SSSRSPRSSWMECR
Trigger: CCGGCACTCCATCCAGCTCGACCTGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGTCCGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS GCA 72 bp GATGCTGGGCGTGTCGGGCTGCCCTGGAGTGGCTGGTaGAGGCTGTCTTCCAGCCGCAGACGAAGCCGGGAC +
Preference number: 6 (lower is better)
Translates to: DAGRVGLPWSGW*RLSSSRRRSRD
Trigger: GTCCCGGCTTCGTCTGCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000491133.1
CDS GCA 72 bp GGCCCACCTCCAGGCCGTTCTGCCAGCCCAAGCTGCTaGTCACAGACCAGCATCGCTCCCCACCTCTCCCCG +
Preference number: 6 (lower is better)
Translates to: GPPPGRSASPSC*SQTSIAPHLSP
Trigger: CGGGGAGAGGTGGGGAGCGATGCTGGTCTGTGAGCAGCAGCTTGGGCTGGCAGAACGGCCTGGAGGTGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS CCA 72 bp GCAGATGCTGGGCGTGTCGGGCTGCCCTGGAGTGGCTaGTGCAGGCTGTCTTCCAGCCGCAGACGAAGCCGG +
Preference number: 6 (lower is better)
Translates to: ADAGRVGLPWSG*CRLSSSRRRSR
Trigger: CCGGCTTCGTCTGCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000491133.1
CDS CCA 72 bp TGTGGATTTACTGCCATAATGGGAGCCCCAGGTGGCTaGGGAGTCTGCTGGCCGGCCGCGGGTCCGGGCGGG +
Preference number: 6 (lower is better)
Translates to: CGFTAIMGAPGG*GVCWPAAGPGG
Trigger: CCCGCCCGGACCCGCGGCCGGCCAGCAGACTCCCCAGCCACCTGGGGCTCCCATTATGGCAGTAAATCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS CCA 72 bp GGCCAGGCTCAGCCCAGCGGATCTCAGTCTCCGAGCTaGCCATTGGGGCTGGCCTGGGCTTCACCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: GQAQPSGSQSPS*PLGLAWASPGP
Trigger: TGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGATCCGCTGGGCTGAGCCTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CAA 72 bp ACGCTCTCGGCAGCCTGCACGGCCCGGCTCAGGGCCTaGTTGAGCTCCTCTAGGTCGCCCAGGTCGAGCTGG +
Preference number: 6 (lower is better)
Translates to: TLSAACTARLRA*LSSSRSPRSSW
Trigger: CCAGCTCGACCTGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CAA 90 bp GTAGAGCGGACGCTCTCGGCAGCCTGCACGGCCCGGCTCAGGGCCTaGTTGAGCTCCTCTAGGTCGCCCAGGTCGAGCTGGATGGAGTGC +
Preference number: 6 (lower is better)
Translates to: VERTLSAACTARLRA*LSSSRSPRSSWMEC
Trigger: GCACTCCATCCAGCTCGACCTGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGTCCGCTCTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS TCA 72 bp TCTCGGCAGCCTGCACGGCCCGGCTCAGGGCCTTGTTaGGCTCCTCTAGGTCGCCCAGGTCGAGCTGGATGG +
Preference number: 6 (lower is better)
Translates to: SRQPARPGSGPC*APLGRPGRAGW
Trigger: CCATCCAGCTCGACCTGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS TCA 72 bp GGAGCCCCGCAGGCTGTGAGCCTGGCGCAGGTCGGCTaGCAGCGAGCTTCTCATCTGCCTGGTGGTAGAGCG +
Preference number: 6 (lower is better)
Translates to: GAPQAVSLAQVG*QRASHLPGGRA
Trigger: CGCTCTACCACCAGGCAGATGAGAAGCTCGCTGTCAGCCGACCTGCGCCAGGCTCACAGCCTGCGGGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS GCA 72 bp CCTGGCCCACCTCCAGGCCGTTCTGCCAGCCCAAGCTaGTGCTCACAGACCAGCATCGCTCCCCACCTCTCC +
Preference number: 6 (lower is better)
Translates to: PGPPPGRSASPS*CSQTSIAPHLS
Trigger: GGAGAGGTGGGGAGCGATGCTGGTCTGTGAGCAGCAGCTTGGGCTGGCAGAACGGCCTGGAGGTGGGCCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS CAA 72 bp CTCTCGGCAGCCTGCACGGCCCGGCTCAGGGCCTTGTaGAGCTCCTCTAGGTCGCCCAGGTCGAGCTGGATG +
Preference number: 6 (lower is better)
Translates to: LSAACTARLRAL*SSSRSPRSSWM
Trigger: CATCCAGCTCGACCTGGGCGACCTAGAGGAGCTCAACAAGGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS GCA 72 bp CCGGAGAGGCCCACTTGGGCTGGAGAGGTACCTCTGTaGTTGGCTCCGGGGTGTGCTGGGCTCTGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: PERPTWAGEVPL*LAPGCAGLCGS
Trigger: AGAGCCACAGAGCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp GCCAGTGTCCGCTCCAGGCTGAAGTTGGGTGCCCTCTaGCGGAGAGGCCCACTTGGGCTGGAGAGGTACCTC +
Preference number: 6 (lower is better)
Translates to: ASVRSRLKLGAL*RRGPLGLERYL
Trigger: GAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTTCAGCCTGGAGCGGACACTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp ATCTGCCTGGTGGTAGAGCGGACGCTCTCGGCAGCCTaGACGGCCCGGCTCAGGGCCTTGTTGAGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: ICLVVERTLSAA*TARLRALLSSS
Trigger: AGAGGAGCTCAACAAGGCCCTGAGCCGGGCCGTGCAGGCTGCCGAGAGCGTCCGCTCTACCACCAGGCAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 72 bp GCTCCCTGCGAGGATCAAATCTTCCAGGCGTCCCCTTaGAGCCGGCAAGCGGCTGGGCAGGGTGTTGCTCCC +
Preference number: 6 (lower is better)
Translates to: APCEDQIFQASP*SRQAAGQGVAP
Trigger: GGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAGATTTGATCCTCGCAGGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp CAGGTGGGGCCCACCGCCTCGGTGCAAAGGCTTCTGTaGAAGGCGCTCAGAGATGCCGCTTCCCTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: QVGPTASVQRLL*KALRDAASLQA
Trigger: AGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCCCCACCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 72 bp AGTTGGGTGCCCTCTGCCGGAGAGGCCCACTTGGGCTaGAGAGGTACCTCTGTGCTTGGCTCCGGGGTGTGC +
Preference number: 6 (lower is better)
Translates to: SWVPSAGEAHLG*RGTSVLGSGVC
Trigger: GCACACCCCGGAGCCAAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp GCTGAAGTTGGGTGCCCTCTGCCGGAGAGGCCCACTTaGGCTGGAGAGGTACCTCTGTGCTTGGCTCCGGGG +
Preference number: 6 (lower is better)
Translates to: AEVGCPLPERPT*AGEVPLCLAPG
Trigger: CCCCGGAGCCAAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGCAGAGGGCACCCAACTTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp CGGTCAAAGGCAGATGCTGGGCGTGTCGGGCTGCCCTaGAGTGGCTGGTGCAGGCTGTCTTCCAGCCGCAGA +
Preference number: 6 (lower is better)
Translates to: RSKADAGRVGLP*SGWCRLSSSRR
Trigger: TCTGCGGCTGGAAGACAGCCTGCACCAGCCACTCCAGGGCAGCCCGACACGCCCAGCATCTGCCTTTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000491133.1
CDS CCA 72 bp GGGACACTGAAGGGTATCAGCGGGAGGCGGTCCCAGTaGGTCCCCTGTGACAGCACCACCCGCATCCTGGGT +
Preference number: 6 (lower is better)
Translates to: GTLKGISGRRSQ*VPCDSTTRILG
Trigger: ACCCAGGATGCGGGTGGTGCTGTCACAGGGGACCCACTGGGACCGCCTCCCGCTGATACCCTTCAGTGTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 72 bp GCCTTGTTGAGCTCCTCTAGGTCGCCCAGGTCGAGCTaGATGGAGTGCCGGTGTCTCCGGGCTGGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: ALLSSSRSPRSS*MECRCLRAGGG
Trigger: TCCCCCACCAGCCCGGAGACACCGGCACTCCATCCAGCTCGACCTGGGCGACCTAGAGGAGCTCAACAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CAA 90 bp TCTGCCTCCAGCTCCCTGCGAGGATCAAATCTTCCAGGCGTCCCCTaGGAGCCGGCAAGCGGCTGGGCAGGGTGTTGCTCCCGACAAGCC +
Preference number: 6 (lower is better)
Translates to: SASSSLRGSNLPGVP*EPASGWAGCCSRQA
Trigger: GGCTTGTCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAGATTTGATCCTCGCAGGGAGCTGGAGGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp CTTCCCTCCAGGCTGGTCATACTACTTTGGTGGGATGCTGCGGACTaGGTGCCTGGAGGGTGGGGTGGCACGCCAGGGCCTGGAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LPSRLVILLWWDAAD*VPGGWGGTPGPGGA
Trigger: AGCCCCTCCAGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS TCA 72 bp AGAGGCTGTGGGCGGCCACTTGGCAGCTGGTTGGGCTaGGGTAGGTCCTGCAGGCGCATAGTACACAGCGGC +
Preference number: 6 (lower is better)
Translates to: RGCGRPLGSWLG*GRSCRRIVHSG
Trigger: GCCGCTGTGTACTATGCGCCTGCAGGACCTACCTCAGCCCAACCAGCTGCCAAGTGGCCGCCCACAGCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS TCA 72 bp GACACCAGGAGCTGCACCCATCCCGGCCCTCCCTCCTaGCCTACCTGTGTATTGGCCCCGGAAGGTGACCCT +
Preference number: 6 (lower is better)
Translates to: DTRSCTHPGPPS*PTCVLAPEGDP
Trigger: AGGGTCACCTTCCGGGGCCAATACACAGGTAGGTCAGGAGGGAGGGCCGGGATGGGTGCAGCTCCTGGTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 72 bp ATCCAGGTCTCCTCCAGGTGGGGCCCACCGCCTCGGTaGAAAGGCTTCTGTGGAAGGCGCTCAGAGATGCCG +
Preference number: 6 (lower is better)
Translates to: IQVSSRWGPPPR*KGFCGRRSEMP
Trigger: CGGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCACCGAGGCGGTGGGCCCCACCTGGAGGAGACCTGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS GCA 72 bp CCTGCCTGTGCCCTCTCTCGGGCTCCACCACCGTCCTaGCGACCCAGTTTCAGGGGACCTGCCTGTGAATTC +
Preference number: 6 (lower is better)
Translates to: PACALSRAPPPS*RPSFRGPACEF
Trigger: GAATTCACAGGCAGGTCCCCTGAAACTGGGTCGGCAGGACGGTGGTGGAGCCCGAGAGAGGGCACAGGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000312033.3
ENST00000374088.8
CDS CCA 72 bp GGCTGGTCATACTACTTTGGTGGGATGCTGCGGACTTaGTGCCTGGAGGGTGGGGTGGCACGCCAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: GWSYYFGGMLRT*CLEGGVARQGL
Trigger: CAGGCCCTGGCGTGCCACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 72 bp CCCATCCCGGCCCTCCCTCCTGACCTACCTGTGTATTaGCCCCGGAAGGTGACCCTGTCTGGCCATCCAGCA +
Preference number: 6 (lower is better)
Translates to: PIPALPPDLPVY*PRKVTLSGHPA
Trigger: TGCTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAATACACAGGTAGGTCAGGAGGGAGGGCCGGGATGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CAA 72 bp AGCTCCCTGCGAGGATCAAATCTTCCAGGCGTCCCCTaGGAGCCGGCAAGCGGCTGGGCAGGGTGTTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSLRGSNLPGVP*EPASGWAGCCS
Trigger: GGAGCAACACCCTGCCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAGATTTGATCCTCGCAGGGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 72 bp GCTCAGCCCAGCGGATCTCAGTCTCCGAGCTGGCCATaGGGGCTGGCCTGGGCTTCACCTGGGCCACTTCAT +
Preference number: 6 (lower is better)
Translates to: AQPSGSQSPSWP*GLAWASPGPLH
Trigger: ATGAAGTGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGATCCGCTGGGCTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CAA 90 bp CCTCTGCCGGAGAGGCCCACTTGGGCTGGAGAGGTACCTCTGTGCTaGGCTCCGGGGTGTGCTGGGCTCTGTGGCTCTTCTGGGAATCAG +
Preference number: 6 (lower is better)
Translates to: PLPERPTWAGEVPLC*APGCAGLCGSSGNQ
Trigger: CTGATTCCCAGAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCCAGCCCAAGTGGGCCTCTCCGGCAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp GTGCAGGCTGTCTTCCAGCCGCAGACGAAGCCGGGACACCTCTTCTaGCAGCTCACAGATGGCCTGGTCTCGCCCTGCCCTGGTGAGCAG +
Preference number: 6 (lower is better)
Translates to: VQAVFQPQTKPGHLF*QLTDGLVSPCPGEQ
Trigger: CTGCTCACCAGGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCGGCTTCGTCTGCGGCTGGAAGACAGCCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS TCA 72 bp CGTGGCCTCCCTGGCATGGGAAGAGAAGACCATCCTTaGGTTCTGCCAGGCAGCCCTGACGCAGGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: RGLPGMGREDHP*VLPGSPDAGVG
Trigger: GCCAACCCCTGCGTCAGGGCTGCCTGGCAGAACTCAAGGATGGTCTTCTCTTCCCATGCCAGGGAGGCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490767.1
CDS TCA 72 bp TCCCTCCTGACCTACCTGTGTATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAGCACTGCCCACCCCTC +
Preference number: 6 (lower is better)
Translates to: SLLTYLCIGPGR*PCLAIQHCPPL
Trigger: GAGGGGTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAATACACAGGTAGGTCAGGAGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 72 bp TCTTCCAGCCGCAGACGAAGCCGGGACACCTCTTCTTaGAGCTCACAGATGGCCTGGCTGGTGGCCCCTGGA +
Preference number: 6 (lower is better)
Translates to: SSSRRRSRDTSS*SSQMAWLVAPG
Trigger: TCCAGGGGCCACCAGCCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCGGCTTCGTCTGCGGCTGGAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374079.8
ENST00000491133.1
CDS CCA 72 bp CGACAAGCCTTCAGGTACTCCTCCTCTAGGGCCGCGTaGGCAGCCTTCAGCCGCTGGAAGCCCTTGACTTGG +
Preference number: 6 (lower is better)
Translates to: RQAFRYSSSRAA*AAFSRWKPLTW
Trigger: CCAAGTCAAGGGCTTCCAGCGGCTGAAGGCTGCCCACGCGGCCCTAGAGGAGGAGTACCTGAAGGCTTGTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp AATCTTCCAGGCGTCCCCTTGGAGCCGGCAAGCGGCTaGGCAGGGTGTTGCTCCCGACAAGCCTTCAGGTAC +
Preference number: 6 (lower is better)
Translates to: NLPGVPLEPASG*AGCCSRQAFRY
Trigger: GTACCTGAAGGCTTGTCGGGAGCAACACCCTGCCCAGCCGCTTGCCGGCTCCAAGGGGACGCCTGGAAGATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp GGGAACCGAGGAGATGTAGGCAAAGGCTGGAGGGGCTaGTGCTGGGGGCGCTGTTGCCAGATACCACAGTCC +
Preference number: 6 (lower is better)
Translates to: GNRGDVGKGWRG*CWGRCCQIPQS
Trigger: GGACTGTGGTATCTGGCAACAGCGCCCCCAGCACCAGCCCCTCCAGCCTTTGCCTACATCTCCTCGGTTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 72 bp CTCCAGTTCTGCCATCTGGGCTTAGGAGGTGGTGGCTaGGGCCCTCTGGCAAGGTTTCTGCCAGGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: LQFCHLGLGGGG*GPLARFLPGQW
Trigger: CCACTGCCCTGGCAGAAACCTTGCCAGAGGGCCCCAGCCACCACCTCCTAAGCCCAGATGGCAGAACTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 72 bp GTCTTCCAGCCGCAGACGAAGCCGGGACACCTCTTCTaGCAGCTCACAGATGGCCTGGTCTCGCCCTGCCCT +
Preference number: 6 (lower is better)
Translates to: VFQPQTKPGHLF*QLTDGLVSPCP
Trigger: AGGGCAGGGCGAGACCAGGCCATCTGTGAGCTGCAAGAAGAGGTGTCCCGGCTTCGTCTGCGGCTGGAAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp CTCTCTTCTTCCCAGCTTTGTGAACTACTTCTATCCACATCCCTCTaGTCCTCGGCCCAGGCCCAGCGCCGCCGCTGGGGGCCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: LSSSQLCELLLSTSL*SSAQAQRRRWGPFP
Trigger: GGGGAAGGGCCCCCAGCGGCGGCGCTGGGCCTGGGCCGAGGACAAGAGGGATGTGGATAGAAGTAGTTCACAAAGCTGGGAAGAAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CAA 90 bp GCCTGTGAATTCTTTGTTCCAAACCCAGGGAGCCCCCTGTCTCCATaGCGCCCTGGCCCACCTCCAGGCCGTTCTGCCAGCCCAAGCTGC +
Preference number: 6 (lower is better)
Translates to: ACEFFVPNPGSPLSP*RPGPPPGRSASPSC
Trigger: GCAGCTTGGGCTGGCAGAACGGCCTGGAGGTGGGCCAGGGCGCAATGGAGACAGGGGGCTCCCTGGGTTTGGAACAAAGAATTCACAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000312033.3
CDS CAA 90 bp CACCGTCCTGCCGACCCAGTTTCAGGGGACCTGCCTGTGAATTCTTaGTTCCAAACCCAGGGAGCCCCCTGTCTCCATTGCGCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: HRPADPVSGDLPVNS*FQTQGAPCLHCALA
Trigger: GGCCAGGGCGCAATGGAGACAGGGGGCTCCCTGGGTTTGGAACAAAGAATTCACAGGCAGGTCCCCTGAAACTGGGTCGGCAGGACGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312033.3
ENST00000374088.8
CDS CAA 90 bp GCTGACGGCCCTGCTGGGGGAGCCAGGCAAGAGGCTCATGGGAACTaGCTGGGCTGTCCACATCCTCTGCTTCAGCCTCTGGAAAGACAG +
Preference number: 6 (lower is better)
Translates to: ADGPAGGARQEAHGN*LGCPHPLLQPLERQ
Trigger: CTGTCTTTCCAGAGGCTGAAGCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTGGCTCCCCCAGCAGGGCCGTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374075.9
CDS TCA 72 bp GCTGGTAAGCGAGGAGGGGCTCAAGTCTCCTCGAGCTaGTGGCCACCCCAGGGTCACCAAGATGCCAAGTGG +
Preference number: 6 (lower is better)
Translates to: AGKRGGAQVSSS*WPPQGHQDAKW
Trigger: CCACTTGGCATCTTGGTGACCCTGGGGTGGCCATCAGCTCGAGGAGACTTGAGCCCCTCCTCGCTTACCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000223791.7
CDS TCA 72 bp CATGGTATTCGTGGCCTGTGTATTGGCCCCGGAAGGTaGCCCTGTCTGGCCATCCAGCACTGCCCACCCCTC +
Preference number: 6 (lower is better)
Translates to: HGIRGLCIGPGR*PCLAIQHCPPL
Trigger: GAGGGGTGGGCAGTGCTGGATGGCCAGACAGGGTCACCTTCCGGGGCCAATACACAGGCCACGAATACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
CDS GCA 72 bp TGGGAGGACCCTGGTGGCCTCTGCTTTCCCTGGAGTTaGAGCCACCCCATCAACTTCCAGGGAGTCACCTCC +
Preference number: 6 (lower is better)
Translates to: WEDPGGLCFPWS*SHPINFQGVTS
Trigger: GGAGGTGACTCCCTGGAAGTTGATGGGGTGGCTGCAACTCCAGGGAAAGCAGAGGCCACCAGGGTCCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp GCTTCCCTCCAGGCTGGTCATACTACTTTGGTGGGATaGTGCGGACTTGGTGCCTGGAGGGTGGGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: ASLQAGHTTLVG*CGLGAWRVGWH
Trigger: GTGCCACCCCACCCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS GCA 72 bp GTGGTCGAGGCTCACTGTCCCACTGCTCCAGGACCTTaGCGGGCTGAGTTCAACGGATGGGTTGACCTCGGA +
Preference number: 6 (lower is better)
Translates to: VVEAHCPTAPGP*RAEFNGWVDLG
Trigger: TCCGAGGTCAACCCATCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGTGGGACAGTGAGCCTCGACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp CCCATGACTTTTCTCAGCCTGCACCGGGCACTGCCTTaGGAGGACCCTGGTGGCCTCTGCTTTCCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: PMTFLSLHRALP*EDPGGLCFPWS
Trigger: ACTCCAGGGAAAGCAGAGGCCACCAGGGTCCTCCCAAGGCAGTGCCCGGTGCAGGCTGAGAAAAGTCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 72 bp CCTGCTGGGGGAGCCAGGCAAGAGGCTCATGGGAACTaGCTGGGCTGTCCACATCCTCTGCTTCAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: PAGGARQEAHGN*LGCPHPLLQPL
Trigger: CAGAGGCTGAAGCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTGGCTCCCCCAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374075.9
CDS GCA 72 bp TACCCTGGTGATAGGGTGGGCAGGAGGCGTGTCCTTTaGCAGGGCTGCTTCTCCACTGCTCAACAGCACCTC +
Preference number: 6 (lower is better)
Translates to: YPGDRVGRRRVL*QGCFSTAQQHL
Trigger: GAGGTGCTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCTGCCCACCCTATCACCAGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp GGCTGGAGAGGTACCTCTGTGCTTGGCTCCGGGGTGTaGTGGGCTCTGTGGCTCTTCTGGGAATCAGAGAAC +
Preference number: 6 (lower is better)
Translates to: GWRGTSVLGSGV*WALWLFWESEN
Trigger: GTTCTCTGATTCCCAGAAGAGCCACAGAGCCCAGCACACCCCGGAGCCAAGCACAGAGGTACCTCTCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp GAGATGCCGCTTCCCTCCAGGCTGGTCATACTACTTTaGTGGGATGCTGCGGACTTGGTGCCTGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: EMPLPSRLVILL*WDAADLVPGGW
Trigger: CCACCCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCGGCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 72 bp ACAGTCGGAGCACCTCCCGAGGCACTGAGGAAGACCTaGCTCGCTGCCTTCCTGGAGGGACAATCTGCTCTT +
Preference number: 6 (lower is better)
Translates to: TVGAPPEALRKT*LAAFLEGQSAL
Trigger: AAGAGCAGATTGTCCCTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTGCTCCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 72 bp GGATCTCAGTCTCCGAGCTGGCCATTGGGGCTGGCCTaGGCTTCACCTGGGCCACTTCATCTTCAGGAGACA +
Preference number: 6 (lower is better)
Translates to: GSQSPSWPLGLA*ASPGPLHLQET
Trigger: TGTCTCCTGAAGATGAAGTGGCCCAGGTGAAGCCCAGGCCAGCCCCAATGGCCAGCTCGGAGACTGAGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CAA 72 bp CCTGCTGGGGGAGCCAGGCAAGAGGCTCATGGGAACTaGCTGGGCTGTCCACATCCTCTGCTTCAGCCTCTT +
Preference number: 6 (lower is better)
Translates to: PAGGARQEAHGN*LGCPHPLLQPL
Trigger: AAGAGGCTGAAGCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCTCTTGCCTGGCTCCCCCAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CAA 90 bp CTGCCCACCCCTCTCTTTCCATCCCGAGCTGCCTGTGGACTGTCCTaGGTGGTCTTGCTCTTCTCAGAGAACAGTGGTAGGGAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: LPTPLFPSRAACGLS*VVLLFSENSGREGS
Trigger: GCTGCCCTCCCTACCACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAGAGAGGGGTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS TCA 72 bp GGGCTGTTCAGAAATCCGTTTGTGCCCCTCAAACTCTaGGCCAGGAACCGCCATCTCGGCTGCCAGTGTCCG +
Preference number: 6 (lower is better)
Translates to: GLFRNPFVPLKL*ARNRHLGCQCP
Trigger: CGGACACTGGCAGCCGAGATGGCGGTTCCTGGCTCAGAGTTTGAGGGGCACAAACGGATTTCTGAACAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS TCA 72 bp ATCCTCTGCTTCAGCCTCTTCTCCCGAAGTCTCTCCTaGCTCGGAATCCTGATGCCCATCGGGCTGCGGGTG +
Preference number: 6 (lower is better)
Translates to: ILCFSLFSRSLS*LGILMPIGLRV
Trigger: CACCCGCAGCCCGATGGGCATCAGGATTCCGAGTCAGGAGAGACTTCGGGAGAAGAGGCTGAAGCAGAGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS TCA 72 bp ACCGTCCTGCCGACCCAGTTTCAGGGGACCTGCCTGTaGATTCTTTGTTCCAAACCCAGGGAGCCCCCTGTC +
Preference number: 6 (lower is better)
Translates to: TVLPTQFQGTCL*ILCSKPREPPV
Trigger: GACAGGGGGCTCCCTGGGTTTGGAACAAAGAATTCACAGGCAGGTCCCCTGAAACTGGGTCGGCAGGACGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000312033.3
ENST00000374088.8
CDS TCA 72 bp CGTGCTCCGCCCAGTGCCTGGCAGATGGAAAGCAGTTaGTGTTATGAGAAAGCTGGGCGGACTGTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RAPPSAWQMESS*CYEKAGRTVAS
Trigger: GGAGGCCACAGTCCGCCCAGCTTTCTCATAACATCAACTGCTTTCCATCTGCCAGGCACTGGGCGGAGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 72 bp GATAGGGTGGGCAGGAGGCGTGTCCTTTGCCAGGGCTaGTTCTCCACTGCTCAACAGCACCTCCTGCACAAT +
Preference number: 6 (lower is better)
Translates to: DRVGRRRVLCQG*FSTAQQHLLHN
Trigger: ATTGTGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCCTGGCAAAGGACACGCCTCCTGCCCACCCTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp AGCACCTCCCGAGGCACTGAGGAAGACCTGGCTCGCTaGCTTCCTGGAGGGACAATCTGCTCTTCACCTCTA +
Preference number: 6 (lower is better)
Translates to: STSRGTEEDLAR*LPGGTICSSPL
Trigger: TAGAGGTGAAGAGCAGATTGTCCCTCCAGGAAGGCAGCGAGCCAGGTCTTCCTCAGTGCCTCGGGAGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 72 bp GTGGAAGGCGCTCAGAGATGCCGCTTCCCTCCAGGCTaGTCATACTACTTTGGTGGGATGCTGCGGACTTGG +
Preference number: 6 (lower is better)
Translates to: VEGAQRCRFPPG*SYYFGGMLRTW
Trigger: CCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 72 bp GGGCCAGGCGGAAGTCCTCTAGGAGCTCGGGGCTGGTaGCATTGGGAAAGAGTCTCTCTTCTTCCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: GPGGSPLGARGW*HWERVSLLPSF
Trigger: AAAGCTGGGAAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAGAGGACTTCCGCCTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CAA 72 bp GACCAGCTCAGTGGCTTGCTCAGGCGTCTGAAATTCTaGGGGTACCCTGGTGATAGGGTGGGCAGGAGGCGT +
Preference number: 6 (lower is better)
Translates to: DQLSGLLRRLKF*GYPGDRVGRRR
Trigger: ACGCCTCCTGCCCACCCTATCACCAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 72 bp AGAGATGCCGCTTCCCTCCAGGCTGGTCATACTACTTaGGTGGGATGCTGCGGACTTGGTGCCTGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: RDAASLQAGHTT*VGCCGLGAWRV
Trigger: CACCCTCCAGGCACCAAGTCCGCAGCATCCCACCAAAGTAGTATGACCAGCCTGGAGGGAAGCGGCATCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CAA 72 bp CCATCCCGAGCTGCCTGTGGACTGTCCTTGGTGGTCTaGCTCTTCTCAGAGAACAGTGGTAGGGAGGGCAGC +
Preference number: 6 (lower is better)
Translates to: PSRAACGLSLVV*LFSENSGREGS
Trigger: GCTGCCCTCCCTACCACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CAA 72 bp GACCTCGGAATGTTCAGAAAGTTTGTCCCCACTGGCTaGTTCGCCAGAAGCCACCCAGCCCCTGGCCTGACC +
Preference number: 6 (lower is better)
Translates to: DLGMFRKFVPTG*FARSHPAPGLT
Trigger: GGTCAGGCCAGGGGCTGGGTGGCTTCTGGCGAACAAGCCAGTGGGGACAAACTTTCTGAACATTCCGAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp GAGCTGATGGACCAGCTCAGTGGCTTGCTCAGGCGTCTGAAATTCTaGGGGTACCCTGGTGATAGGGTGGGCAGGAGGCGTGTCCTTTGC +
Preference number: 6 (lower is better)
Translates to: ELMDQLSGLLRRLKF*GYPGDRVGRRRVLC
Trigger: GCAAAGGACACGCCTCCTGCCCACCCTATCACCAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp GAGAGACTTCACACTGAGGTACCGCTCCATGAGGCCATGGTAAACTaGCTCCATCTGCAGCTCCTTGTGCCTGAGTCGGGCCAGGGGGTC +
Preference number: 6 (lower is better)
Translates to: ERLHTEVPLHEAMVN*LHLQLLVPESGQGV
Trigger: GACCCCCTGGCCCGACTCAGGCACAAGGAGCTGCAGATGGAGCAAGTTTACCATGGCCTCATGGAGCGGTACCTCAGTGTGAAGTCTCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp GGATGGGTTGACCTCGGAATGTTCAGAAAGTTTGTCCCCACTGGCTaGTTCGCCAGAAGCCACCCAGCCCCTGGCCTGACCATGCCCAAG +
Preference number: 6 (lower is better)
Translates to: GWVDLGMFRKFVPTG*FARSHPAPGLTMPK
Trigger: CTTGGGCATGGTCAGGCCAGGGGCTGGGTGGCTTCTGGCGAACAAGCCAGTGGGGACAAACTTTCTGAACATTCCGAGGTCAACCCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp GGGCTGAGTTCAACGGATGGGTTGACCTCGGAATGTTCAGAAAGTTaGTCCCCACTGGCTTGTTCGCCAGAAGCCACCCAGCCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: GLSSTDGLTSECSES*SPLACSPEATQPLA
Trigger: GGCCAGGGGCTGGGTGGCTTCTGGCGAACAAGCCAGTGGGGACAAACTTTCTGAACATTCCGAGGTCAACCCATCCGTTGAACTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp CACTCCCTCGTTATGGTCCATGGAGCAGAATGTGCCTCTGGCCTCTaGCCTTGTCCCCAGAATCTGAGGTCAGCAGCCCTCCCTCTTCTG +
Preference number: 6 (lower is better)
Translates to: HSLVMVHGAECASGL*PCPQNLRSAALPLL
Trigger: CAGAAGAGGGAGGGCTGCTGACCTCAGATTCTGGGGACAAGGCAAGAGGCCAGAGGCACATTCTGCTCCATGGACCATAACGAGGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 72 bp GCCAGGGCTGCTTCTCCACTGCTCAACAGCACCTCCTaGACAATCTCAGCTGGAGACTTGAAGATGAGGGGC +
Preference number: 6 (lower is better)
Translates to: ARAASPLLNSTS*TISAGDLKMRG
Trigger: GCCCCTCATCTTCAAGTCTCCAGCTGAGATTGTGCAGGAGGTGCTGTTGAGCAGTGGAGAAGCAGCCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp CATCCCGAGCTGCCTGTGGACTGTCCTTGGTGGTCTTaGTCTTCTCAGAGAACAGTGGTAGGGAGGGCAGCT +
Preference number: 6 (lower is better)
Translates to: HPELPVDCPWWS*SSQRTVVGRAA
Trigger: AGCTGCCCTCCCTACCACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS GCA 72 bp AGTCCTGGAATTCCATGGGGGTTGCCCGAGCAACACTaGCTCCAGTTCTGCCATCTGGGCTTAGGAGGTGGT +
Preference number: 6 (lower is better)
Translates to: SPGIPWGLPEQH*LQFCHLGLGGG
Trigger: ACCACCTCCTAAGCCCAGATGGCAGAACTGGAGGCAGTGTTGCTCGGGCAACCCCCATGGAATTCCAGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp AATCTGGTCGTTTCTCTCCTCCATCTATCTGTGGCATaGTGCGGACTCTGGGCTGGGGGAGCTGAGGAGTCC +
Preference number: 6 (lower is better)
Translates to: NLVVSLLHLSVA*CGLWAGGAEES
Trigger: GGACTCCTCAGCTCCCCCAGCCCAGAGTCCGCAGCATGCCACAGATAGATGGAGGAGAGAAACGACCAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp TCAGAGAACAGGTTCACCTTGGCCCCGAGGCGTAGCTaGTCAATGGTGTTCTCGGCCTCAGCGTACTTGGTG +
Preference number: 6 (lower is better)
Translates to: SENRFTLAPRRS*SMVFSASAYLV
Trigger: CACCAAGTACGCTGAGGCCGAGAACACCATTGACCAGCTACGCCTCGGGGCCAAGGTGAACCTGTTCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp GAAGCTCCATCCCTGGGCACAGATGCAGCAAAGGGCTaGGCTAATGTTCCTGCTGTGCTGATGTGGGAGAGC +
Preference number: 6 (lower is better)
Translates to: EAPSLGTDAAKG*ANVPAVLMWES
Trigger: GCTCTCCCACATCAGCACAGCAGGAACATTAGCCCAGCCCTTTGCTGCATCTGTGCCCAGGGATGGAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp GAGCCTGTGGTAGTCTTCCTGGAGCTGATGGACCAGCTCAGTGGCTaGCTCAGGCGTCTGAAATTCTTGGGGTACCCTGGTGATAGGGTG +
Preference number: 6 (lower is better)
Translates to: EPVVVFLELMDQLSG*LRRLKFLGYPGDRV
Trigger: CACCCTATCACCAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATCAGCTCCAGGAAGACTACCACAGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp GTCCCACTGCTCCAGGACCTTGCCGGGCTGAGTTCAACGGATGGGTaGACCTCGGAATGTTCAGAAAGTTTGTCCCCACTGGCTTGTTCG +
Preference number: 6 (lower is better)
Translates to: VPLLQDLAGLSSTDG*TSECSESLSPLACS
Trigger: CGAACAAGCCAGTGGGGACAAACTTTCTGAACATTCCGAGGTCAACCCATCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGTGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS TCA 72 bp GCTGGTCAATGGTGTTCTCGGCCTCAGCGTACTTGGTaGGGAGCCTGTGGTAGTCTTCCTGGAGCTGATGGA +
Preference number: 6 (lower is better)
Translates to: AGQWCSRPQRTW*GACGSLPGADG
Trigger: TCCATCAGCTCCAGGAAGACTACCACAGGCTCCTCACCAAGTACGCTGAGGCCGAGAACACCATTGACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS TCA 72 bp CAGGCGCATAGTACACAGCGGCAGGTGGATAAGGCATaGTGGGAACCGAGGAGATGTAGGCAAAGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: QAHSTQRQVDKA*WEPRRCRQRLE
Trigger: CTCCAGCCTTTGCCTACATCTCCTCGGTTCCCATCATGCCTTATCCACCTGCCGCTGTGTACTATGCGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS GCA 72 bp CTCGGTGCAAAGGCTTCTGTGGAAGGCGCTCAGAGATaGCGCTTCCCTCCAGGCTGGTCATACTACTTTGGT +
Preference number: 6 (lower is better)
Translates to: LGAKASVEGAQR*RFPPGWSYYFG
Trigger: ACCAAAGTAGTATGACCAGCCTGGAGGGAAGCGGCATCTCTGAGCGCCTTCCACAGAAGCCTTTGCACCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 72 bp ACTGCCCACCCCTCTCTTTCCATCCCGAGCTGCCTGTaGACTGTCCTTGGTGGTCTTGCTCTTCTCAGAGAA +
Preference number: 6 (lower is better)
Translates to: TAHPSLSIPSCL*TVLGGLALLRE
Trigger: TTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAGAGAGGGGTGGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 72 bp TCTCCTTCCCAGGTAGAATCAAGGCTGTCACTAGGGTaGTCGAGGCTCACTGTCCCACTGCTCCAGGACCTT +
Preference number: 6 (lower is better)
Translates to: SPSQVESRLSLG*SRLTVPLLQDL
Trigger: AAGGTCCTGGAGCAGTGGGACAGTGAGCCTCGACCACCCTAGTGACAGCCTTGATTCTACCTGGGAAGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp CGTATCCGTGTCGTGCTCCGCCCAGTGCCTGGCAGATaGAAAGCAGTTGATGTTATGAGAAAGCTGGGCGGA +
Preference number: 6 (lower is better)
Translates to: RIRVVLRPVPGR*KAVDVMRKLGG
Trigger: TCCGCCCAGCTTTCTCATAACATCAACTGCTTTCCATCTGCCAGGCACTGGGCGGAGCACGACACGGATACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CAA 72 bp CAAGTGATGCTATTCCCCACACCCCGACTTGCTGGTTaGGTTCTGAATGGCTCGGGCACAGGGTCAGTGGTG +
Preference number: 6 (lower is better)
Translates to: QVMLFPTPRLAG*VLNGSGTGSVV
Trigger: CACCACTGACCCTGTGCCCGAGCCATTCAGAACCAAACCAGCAAGTCGGGGTGTGGGGAATAGCATCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CAA 90 bp CCTCTCTTTCCATCCCGAGCTGCCTGTGGACTGTCCTTGGTGGTCTaGCTCTTCTCAGAGAACAGTGGTAGGGAGGGCAGCTCAGATTCT +
Preference number: 6 (lower is better)
Translates to: PLFPSRAACGLSLVV*LFSENSGREGSSDS
Trigger: AGAATCTGAGCTGCCCTCCCTACCACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CAA 90 bp TGCTGGGCCAGGCGGAAGTCCTCTAGGAGCTCGGGGCTGGTGGCATaGGGAAAGAGTCTCTCTTCTTCCCAGCTTTGTGAACTACTTCTA +
Preference number: 6 (lower is better)
Translates to: CWARRKSSRSSGLVA*GKSLSSSQLCELLL
Trigger: TAGAAGTAGTTCACAAAGCTGGGAAGAAGAGAGACTCTTTCCCAATGCCACCAGCCCCGAGCTCCTAGAGGACTTCCGCCTGGCCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374088.8
CDS CCA 72 bp TGTGGTAGTCTTCCTGGAGCTGATGGACCAGCTCAGTaGCTTGCTCAGGCGTCTGAAATTCTTGGGGTACCC +
Preference number: 6 (lower is better)
Translates to: CGSLPGADGPAQ*LAQASEILGVP
Trigger: GGGTACCCCAAGAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATCAGCTCCAGGAAGACTACCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp AGGCCTGACATGTGCCCGTCTCTAGCCAGGGATGCCTaGAAACCTGGTGGCTTCATAGATACCATCTTCTCC +
Preference number: 6 (lower is better)
Translates to: RPDMCPSLARDA*KPGGFIDTIFS
Trigger: GGAGAAGATGGTATCTATGAAGCCACCAGGTTTCCAGGCATCCCTGGCTAGAGACGGGCACATGTCAGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374088.8
ENST00000490767.1
CDS CCA 72 bp CTCTCTTTCCATCCCGAGCTGCCTGTGGACTGTCCTTaGTGGTCTTGCTCTTCTCAGAGAACAGTGGTAGGG +
Preference number: 6 (lower is better)
Translates to: LSFHPELPVDCP*WSCSSQRTVVG
Trigger: CCCTACCACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CCA 72 bp ACTGCTCCAGGACCTTGCCGGGCTGAGTTCAACGGATaGGTTGACCTCGGAATGTTCAGAAAGTTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: TAPGPCRAEFNG*VDLGMFRKFVP
Trigger: GGGGACAAACTTTCTGAACATTCCGAGGTCAACCCATCCGTTGAACTCAGCCCGGCAAGGTCCTGGAGCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 72 bp GTAGTCTTCCTGGAGCTGATGGACCAGCTCAGTGGCTaGCTCAGGCGTCTGAAATTCTTGGGGTACCCTGGT +
Preference number: 6 (lower is better)
Translates to: VVFLELMDQLSG*LRRLKFLGYPG
Trigger: ACCAGGGTACCCCAAGAATTTCAGACGCCTGAGCAAGCCACTGAGCTGGTCCATCAGCTCCAGGAAGACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 72 bp CCTCTCTTTCCATCCCGAGCTGCCTGTGGACTGTCCTaGGTGGTCTTGCTCTTCTCAGAGAACAGTGGTAGG +
Preference number: 6 (lower is better)
Translates to: PLFPSRAACGLS*VVLLFSENSGR
Trigger: CCTACCACTGTTCTCTGAGAAGAGCAAGACCACCAAGGACAGTCCACAGGCAGCTCGGGATGGAAAGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000223791.7
ENST00000307564.8
ENST00000374075.9
ENST00000374079.8
ENST00000374088.8
ENST00000492875.1
CDS CAA 72 bp CTCCAGGACCTTGCCGGGCTGAGTTCAACGGATGGGTaGACCTCGGAATGTTCAGAAAGTTTGTCCCCACTG +
Preference number: 6 (lower is better)
Translates to: LQDLAGLSSTDG*TSECSESLSPL
Trigger: CAGTGGGGACAAACTTTCTGAACATTCCGAGGTCAACCCATCCGTTGAACTCAGCCCGGCAAGGTCCTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS GCA 72 bp AGGCTCATGGGAACTTGCTGGGCTGTCCACATCCTCTaGTTCAGCCTCTGGAAAGACAGGCCATTCACTTCT +
Preference number: 6 (lower is better)
Translates to: RLMGTCWAVHIL*FSLWKDRPFTS
Trigger: AGAAGTGAATGGCCTGTCTTTCCAGAGGCTGAAGCAGAGGATGTGGACAGCCCAGCAAGTTCCCATGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374075.9
CDS CCA 72 bp TTTCTAACTCCTTGGCCTCTGTCCACTCCCTCGTTATaGTCCATGGAGCAGAATGTGCCTCTGGCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: FLTPWPLSTPSL*SMEQNVPLASC
Trigger: GCAAGAGGCCAGAGGCACATTCTGCTCCATGGACCATAACGAGGGAGTGGACAGAGGCCAAGGAGTTAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CAA 72 bp TCAACGGATGGGTTGACCTCGGAATGTTCAGAAAGTTaGTCCCCACTGGCTTGTTCGCCAGAAGCCACCCAG +
Preference number: 6 (lower is better)
Translates to: STDGLTSECSES*SPLACSPEATQ
Trigger: CTGGGTGGCTTCTGGCGAACAAGCCAGTGGGGACAAACTTTCTGAACATTCCGAGGTCAACCCATCCGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CAA 90 bp TCCGGTGAGCTTGGAGGTGTTCCTGCTACTGTCGTTTCTAACTCCTaGGCCTCTGTCCACTCCCTCGTTATGGTCCATGGAGCAGAATGT +
Preference number: 6 (lower is better)
Translates to: SGELGGVPATVVSNS*ASVHSLVMVHGAEC
Trigger: ACATTCTGCTCCATGGACCATAACGAGGGAGTGGACAGAGGCCAAGGAGTTAGAAACGACAGTAGCAGGAACACCTCCAAGCTCACCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS TCA 72 bp TTACCCACCCCTGAGTTTCAAATAAGGCCTTCTGGGTaGCACCTGAAGCCACTGTGGAGCGGTCTCATCATC +
Preference number: 6 (lower is better)
Translates to: LPTPEFQIRPSG*HLKPLWSGLII
Trigger: GATGATGAGACCGCTCCACAGTGGCTTCAGGTGTCACCCAGAAGGCCTTATTTGAAACTCAGGGGTGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CAA 72 bp CTTGGAGGTGTTCCTGCTACTGTCGTTTCTAACTCCTaGGCCTCTGTCCACTCCCTCGTTATGGTCCATGGA +
Preference number: 6 (lower is better)
Translates to: LGGVPATVVSNS*ASVHSLVMVHG
Trigger: TCCATGGACCATAACGAGGGAGTGGACAGAGGCCAAGGAGTTAGAAACGACAGTAGCAGGAACACCTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS TCA 72 bp TTCCTGAGACACAGGGGCCCTCTGGAAATGAGAACCTaGAGGAAGCCAGGTGCAAATGGGACATCCAATTCA +
Preference number: 6 (lower is better)
Translates to: FLRHRGPLEMRT*RKPGANGTSNS
Trigger: TGAATTGGATGTCCCATTTGCACCTGGCTTCCTTCAGGTTCTCATTTCCAGAGGGCCCCTGTGTCTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CCA 72 bp TCCAGATGTGTTCCTTGGGCTGAGGGCAGAAGAATCTaGTCGTTTCTCTCCTCCATCTATCTGTGGCATGCT +
Preference number: 6 (lower is better)
Translates to: SRCVPWAEGRRI*SFLSSIYLWHA
Trigger: AGCATGCCACAGATAGATGGAGGAGAGAAACGACCAGATTCTTCTGCCCTCAGCCCAAGGAACACATCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307564.8
ENST00000312033.3
ENST00000374075.9
ENST00000374088.8
CDS CCA 72 bp TTTGGGACCGCCTTAGGGGACAGAACATGGTATTCGTaGCCTGGGGAAAGAAACCAGAACTGTCAGTATCAG +
Preference number: 6 (lower is better)
Translates to: FGTALGDRTWYS*PGERNQNCQYQ
Trigger: CTGATACTGACAGTTCTGGTTTCTTTCCCCAGGCCACGAATACCATGTTCTGTCCCCTAAGGCGGTCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS TCA 72 bp CTCCTATTCTGTTTCATCTCAGATCCTAGAACCAGCTaGCATCCAGTAGCAACCAACACACCCAGGCTAAGT +
Preference number: 6 (lower is better)
Translates to: LLFCFISDPRTS*HPVATNTPRLS
Trigger: ACTTAGCCTGGGTGTGTTGGTTGCTACTGGATGTCAGCTGGTTCTAGGATCTGAGATGAAACAGAATAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS CAA 72 bp CCAGTAGCAACCAACACACCCAGGCTAAGTCAGGATTaGAAAGCAGGCCAGGAAGAAATGATAAGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: PVATNTPRLSQD*KAGQEEMISKA
Trigger: TGCTTTGCTTATCATTTCTTCCTGGCCTGCTTTCAAATCCTGACTTAGCCTGGGTGTGTTGGTTGCTACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492875.1
CDS GCA 72 bp AAGACAGGCCATTCACTTCTTAGCATATACCAGCTCTaGACCCACCTTGTAACTTACCCTAAGTCACTTCAA +
Preference number: 6 (lower is better)
Translates to: KTGHSLLSIYQL*THLVTYPKSLQ
Trigger: TTGAAGTGACTTAGGGTAAGTTACAAGGTGGGTGCAGAGCTGGTATATGCTAAGAAGTGAATGGCCTGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374075.9
CDS TCA 72 bp GGTTTTCATATCACAGAACTGATAGAAAATGATATTTaGATGGCCCACTGGGTATATGGAAAGGGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: GFHITELIENDI*MAHWVYGKGFS
Trigger: TGAGAAGCCCTTTCCATATACCCAGTGGGCCATTCAAATATCATTTTCTATCAGTTCTGTGATATGAAAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492875.1