Pregenerated sensors for AKIRIN2 (Homo sapiens)
Ensembl gene IDs: ENSG00000135334Ensembl transcript IDs: ENST00000257787.6, ENST00000420494.2
Found 13 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GGGAGGCAGCGGCCGAGGTGGGCGCCGACAATGGCGCACATCGCCTaGGCTTCGGGGACGCCGGGCTCAACAGCGGGTCGAAATCCAGAG | + |
Preference number: 5 (lower is better) Translates to: GRQRPRWAPTMAHIA*ASGTPGSTAGRNPE Trigger: CTCTGGATTTCGACCCGCTGTTGAGCCCGGCGTCCCCGAAGCGCAGGCGATGTGCGCCATTGTCGGCGCCCACCTCGGCCGCTGCCTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS GCA 90 bp | AGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATTGCGAGGTAGCTaGCGCAGCAGGAACCCAAGCGAACACGTCCAACCGCTTCCCCTC | + |
Preference number: 5 (lower is better) Translates to: SSLRAAIDAERLRGS*RSRNPSEHVQPLPL Trigger: GAGGGGAAGCGGTTGGACGTGTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS GCA 90 bp | CGAGTACGGTCAGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATTaGGAGGTAGCTGCCGCAGCAGGAACCCAAGCGAACACGTCCAAC | + |
Preference number: 5 (lower is better) Translates to: RVRSVACERRSMQRD*EVAAAAGTQANTSN Trigger: GTTGGACGTGTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGACCGTACTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS CCA 90 bp | TCTCAGGAAATGTTTCAAGATGAAAAGCAAAAGTCTGAAGTCCCTTaGAATCTTGGGTTGATTTCTTCATTATTCTCAAGGCTAGGTTGT | + |
Preference number: 5 (lower is better) Translates to: SQEMFQDEKQKSEVP*NLGLISSLFSRLGC Trigger: ACAACCTAGCCTTGAGAATAATGAAGAAATCAACCCAAGATTCCAAGGGACTTCAGACTTTTGCTTTTCATCTTGAAACATTTCCTGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420494.2 |
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CDS GCA 72 bp | CGGCCGAGGTGGGCGCCGACAATGGCGCACATCGCCTaGGCTTCGGGGACGCCGGGCTCAACAGCGGGTCGA | + |
Preference number: 6 (lower is better) Translates to: RPRWAPTMAHIA*ASGTPGSTAGR Trigger: TCGACCCGCTGTTGAGCCCGGCGTCCCCGAAGCGCAGGCGATGTGCGCCATTGTCGGCGCCCACCTCGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS CCA 72 bp | TCAACAGCGGGTCGAAATCCAGAGTCCTTTTCAGAGTaGCTCCGCACGCCATGGCCGGGGGCAGCTGAGGCG | + |
Preference number: 6 (lower is better) Translates to: STAGRNPESFSE*LRTPWPGAAEA Trigger: CGCCTCAGCTGCCCCCGGCCATGGCGTGCGGAGCCACTCTGAAAAGGACTCTGGATTTCGACCCGCTGTTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS CAA 90 bp | GAGGCTGGAACGCGGCTCCTAATACGCCCGAGTACGGTCAGTAGCTaGCGAGCGGCGATCGATGCAGAGAGATTGCGAGGTAGCTGCCGC | + |
Preference number: 6 (lower is better) Translates to: EAGTRLLIRPSTVSS*RAAIDAERLRGSCR Trigger: GCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGACCGTACTCGGGCGTATTAGGAGCCGCGTTCCAGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS GCA 72 bp | CGAGCGGCGATCGATGCAGAGAGATTGCGAGGTAGCTaGCGCAGCAGGAACCCAAGCGAACACGTCCAACCG | + |
Preference number: 6 (lower is better) Translates to: RAAIDAERLRGS*RSRNPSEHVQP Trigger: CGGTTGGACGTGTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS CAA 90 bp | CCGAGTACGGTCAGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATaGCGAGGTAGCTGCCGCAGCAGGAACCCAAGCGAACACGTCCAA | + |
Preference number: 6 (lower is better) Translates to: PSTVSSLRAAIDAER*RGSCRSRNPSEHVQ Trigger: TTGGACGTGTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGACCGTACTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS GCA 72 bp | TCAGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATTaGGAGGTAGCTGCCGCAGCAGGAACCCAAGCGAAC | + |
Preference number: 6 (lower is better) Translates to: SVACERRSMQRD*EVAAAAGTQAN Trigger: GTTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS CAA 72 bp | GTCAGTAGCTTGCGAGCGGCGATCGATGCAGAGAGATaGCGAGGTAGCTGCCGCAGCAGGAACCCAAGCGAA | + |
Preference number: 6 (lower is better) Translates to: VSSLRAAIDAER*RGSCRSRNPSE Trigger: TTCGCTTGGGTTCCTGCTGCGGCAGCTACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS CAA 72 bp | ACGCGGCTCCTAATACGCCCGAGTACGGTCAGTAGCTaGCGAGCGGCGATCGATGCAGAGAGATTGCGAGGT | + |
Preference number: 6 (lower is better) Translates to: TRLLIRPSTVSS*RAAIDAERLRG Trigger: ACCTCGCAATCTCTCTGCATCGATCGCCGCTCGCAAGCTACTGACCGTACTCGGGCGTATTAGGAGCCGCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000257787.6 |
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CDS TCA 72 bp | AAAGTTCAACATTTCTCAAGGTCTAGACTTATAGTGTaGTCATATTACAGTACTCGGGAAGAGCATTTTCTT | + |
Preference number: 6 (lower is better) Translates to: KVQHFSRSRLIV*SYYSTREEHFL Trigger: AAGAAAATGCTCTTCCCGAGTACTGTAATATGATCACACTATAAGTCTAGACCTTGAGAAATGTTGAACTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420494.2 |