Pregenerated sensors for AKIRIN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000174574Ensembl transcript IDs: ENST00000372984.8, ENST00000432648.8, ENST00000446189.6
Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTGCTTGGTGGGGTCTGCGTCTaGAACGGCGGCGGCGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: HIHTYTHTLTRTSYRTVLGGVCV*NGGGGS Trigger: CGAGCCGCCGCCGCCGTTTCAGACGCAGACCCCACC...AAGCACAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372984.8 ENST00000432648.8 ENST00000446189.6 |
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| CDS-3UTR TCA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGGGTGGGGTCTGCGTCTaGAACGGCGGCGGCGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: KYTYTHIHTLSHALLTELGGVCV*NGGGGS Trigger: CGAGCCGCCGCCGCCGTTTCAGACGCAGACCCCACC...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372984.8 ENST00000432648.8 ENST00000446189.6 |
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| CDS-3UTR GCA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGGGCGGGGCGGGCTGCTaGAGACTCTGCGGTGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KYTYTHIHTLSHALLTELGGAGC*RLCGGV Trigger: GACCCCACCGCAGAGTCTGCAGCAGCCCGCCCCGCC...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000372984.8 ENST00000432648.8 ENST00000446189.6 |
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| CDS-3UTR GCA 90 bp | CACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTGCTTTGGGCTCACCTCTCATaGTCCCAAGCCAACCCTGAT | + |
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Preference number: 4 (lower is better) Translates to: HIHTYTHTLTRTSYRTVLWAHLS*SQANPD Trigger: ATCAGGGTTGGCTTGGGAGCATGAGAGGTGAGCCCA...AAGCACAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432648.8 |
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| CDS-3UTR GCA 90 bp | CACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTGCTTCAGTGGCATGATCTGTaGTCACTGCAACCGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: HIHTYTHTLTRTSYRTVLQWHDL*SLQPPP Trigger: AGGTGGCGGTTGCAGTGAGCACAGATCATGCCACTG...AAGCACAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432648.8 |
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| CDS-3UTR GCA 90 bp | CACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTGCTTTTGCCCAGGCTGGAGTaGAGTGGCATGATCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: HIHTYTHTLTRTSYRTVLLPRLE*SGMICA Trigger: AGCACAGATCATGCCACTGCACTCCAGCCTGGGCAA...AAGCACAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000432648.8 |
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| CDS-3UTR CCA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGAGCCTCCCAAGCAGCTaGGATTACAGACGCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KYTYTHIHTLSHALLTELSLPSS*DYRRLP Trigger: TGGCAGGCGTCTGTAATCCCAGCTGCTTGGGAGGCT...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432648.8 |
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| CDS-3UTR CCA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGCAGGCTGGAGTGCAGTaGCATGATCTGTGCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: KYTYTHIHTLSHALLTELQAGVQ*HDLCSL Trigger: CAGTGAGCACAGATCATGCCACTGCACTCCAGCCTG...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432648.8 |
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| CDS-3UTR TCA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGGTCCTTCTTCATCCATaGGGAACCCGGAGTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: KYTYTHIHTLSHALLTELVLLHP*GTRSWK Trigger: CTTCCAACTCCGGGTTCCTCATGGATGAAGAAGGAC...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372984.8 |
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| CDS-3UTR TCA 90 bp | CACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTGCTTTGTGACAAAGCTTCATaGCACATAGCTTGTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HIHTYTHTLTRTSYRTVLCDKAS*HIACWP Trigger: AGGCCAACAAGCTATGTGTCATGAAGCTTTGTCACA...AAGCACAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372984.8 ENST00000432648.8 ENST00000446189.6 |
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| CDS-3UTR TCA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTGTGACAAAGCTTCATaGCACATAGCTTGTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KYTYTHIHTLSHALLTELCDKAS*HIACWP Trigger: AGGCCAACAAGCTATGTGTCATGAAGCTTTGTCACA...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372984.8 ENST00000432648.8 ENST00000446189.6 |
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| CDS-3UTR CCA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGAGATTCATATTGTTCTaGAGAGCTAGGTGCTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: KYTYTHIHTLSHALLTELRFILF*RARCCE Trigger: CTCACAGCACCTAGCTCTCCAGAACAATATGAATCT...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446189.6 |
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| CDS-3UTR CCA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGAATGCAATGTTGAACTaGGGAAATGGTTATAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KYTYTHIHTLSHALLTELNAMLN*GNGYSS Trigger: GCTGCTATAACCATTTCCCCAGTTCAACATTGCATT...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432648.8 |
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| CDS-3UTR CAA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGATGAGGAACCCGGAGTaGGAAGGCGCCGCTCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: KYTYTHIHTLSHALLTELMRNPE*EGAARC Trigger: GCAGCGAGCGGCGCCTTCCAACTCCGGGTTCCTCAT...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000372984.8 |
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| CDS-3UTR CAA 90 bp | CACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTGCTTTTCATGACACATAGCTaGTTGGCCTTGTCCCATACC | + |
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Preference number: 5 (lower is better) Translates to: HIHTYTHTLTRTSYRTVLFMTHS*LALSHT Trigger: GGTATGGGACAAGGCCAACAAGCTATGTGTCATGAA...AAGCACAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000372984.8 ENST00000432648.8 ENST00000446189.6 |
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| CDS-3UTR CAA 90 bp | CACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTGCTTTATGTTCTGAAAAATTaGCTCCGGAGTTGGAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: HIHTYTHTLTRTSYRTVLYVLKN*LRSWKA Trigger: CGCCTTCCAACTCCGGAGCAAATTTTTCAGAACATA...AAGCACAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000432648.8 ENST00000446189.6 |
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| CDS-3UTR CAA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGTTCATGACACATAGCTaGTTGGCCTTGTCCCATACC | + |
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Preference number: 5 (lower is better) Translates to: KYTYTHIHTLSHALLTELFMTHS*LALSHT Trigger: GGTATGGGACAAGGCCAACAAGCTATGTGTCATGAA...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000372984.8 ENST00000432648.8 ENST00000446189.6 |
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| CDS-3UTR CAA 90 bp | AAATACACATACACACATATACACACACTCTCACACGCACTTCTTACAGAACTGCACAAAAGATTCATATaGTTCTGGAGAGCTAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: KYTYTHIHTLSHALLTELHKRFI*FWRARC Trigger: GCACCTAGCTCTCCAGAACAATATGAATCTTTTGTG...CAGTTCTGTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446189.6 |
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