RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP9 (Homo sapiens)

Ensembl gene IDs: ENSG00000127914

Ensembl transcript IDs: ENST00000356239.8, ENST00000359028.7, ENST00000394534.7, ENST00000394564.5, ENST00000435423.2, ENST00000463118.2, ENST00000486313.2, ENST00000487258.5, ENST00000487692.2, ENST00000491695.2, ENST00000493453.1, ENST00000674381.2, ENST00000679448.1, ENST00000679457.1, ENST00000679474.1, ENST00000679521.1, ENST00000679554.1, ENST00000679722.1, ENST00000679821.1, ENST00000680047.1, ENST00000680072.1, ENST00000680074.1, ENST00000680181.1, ENST00000680365.1, ENST00000680513.1, ENST00000680534.1, ENST00000680766.1, ENST00000680952.1, ENST00000681216.1, ENST00000681412.1, ENST00000681722.1

Found 3769 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTaGAATTCCCGCTCCCTATCTAGGGTACTACTCATTTCCCGAATT +
Preference number: 1 (lower is better)
Translates to: GGRDCPVPSLLCSCA*NSRSLSRVLLISRI
Trigger: AATTCGGGAAATGAGTAGTACCCTAGATAGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR TCA 90 bp TTACTGAGCTCCACAGCTAGCTGTTCTCTGGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTT +
Preference number: 1 (lower is better)
Translates to: LLSSTASCSLALDSS*RRSRSSSWHLRDSV
Trigger: AACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGCTAGCTGTGGAGCTCAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 90 bp AACTCAGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTaGGCTCCACTTGCATCTCCAGCATTTGAGACTGCTTCTGCTGTA +
Preference number: 1 (lower is better)
Translates to: NSAAPAVPLLCLSYC*APLASPAFETASAV
Trigger: TACAGCAGAAGCAGTCTCAAATGCTGGAGATGCAAGTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR GCA 90 bp TTGCGCAGCTCACAACACAGCTTCTCTCTTCCAGCTAAAGACAGCTaGTTTAGTGCTTCCAGCTCCTCTAAAAGCACCCTCTCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: LRSSQHSFSLPAKDS*FSASSSSKSTLSLS
Trigger: AGAGAGAGAGAGGGTGCTTTTAGAGGAGCTGGAAGCACTAAAGCAGCTGTCTTTAGCTGGAAGAGAGAAGCTGTGTTGTGAGCTGCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR GCA 90 bp AGCAACCACCATTTTCTCAGAACTCAGCTGCTCCTGCAGTTCCGTTaGTCTGTCTTTCATACTGCTGAGCTCCACTTGCATCTCCAGCAT +
Preference number: 1 (lower is better)
Translates to: SNHHFLRTQLLLQFR*SVFHTAELHLHLQH
Trigger: ATGCTGGAGATGCAAGTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTCTGAGAAAATGGTGGTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR GCA 90 bp AGCTCACTCTTCAGTTCAGCAACCACCATTTTCTCAGAACTCAGCTaGTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCC +
Preference number: 1 (lower is better)
Translates to: SSLFSSATTIFSELS*SCSSVALSFILLSS
Trigger: GGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTCTGAGAAAATGGTGGTTGCTGAACTGAAGAGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR CCA 90 bp ACAGATGCCTCTGCTTCTGACCTCCAAATTAGGCTGGCAGATGACTaGCTTTTACTAGATCTATCTAGAATCCCAAGGACATGGCGACCA +
Preference number: 1 (lower is better)
Translates to: TDASASDLQIRLADD*LLLDLSRIPRTWRP
Trigger: TGGTCGCCATGTCCTTGGGATTCTAGATAGATCTAGTAAAAGCCAGTCATCTGCCAGCCTAATTTGGAGGTCAGAAGCAGAGGCATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR GCA 90 bp TCCTCCATCTGTGCCATGTGTTGTCTTATTAATTCTTGTTTCATTTaGACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGAGT +
Preference number: 1 (lower is better)
Translates to: SSICAMCCLINSCFI*TICCPYISSSSARS
Trigger: ACTCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAGAATTAATAAGACAACACATGGCACAGATGGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR CCA 90 bp GATCCTCAAGTTCTTCTTTATCCCGTTCTTCACTGCGTCCCAACTTaGCTTTCTCTTTCTCCAAAGCCCACTGGAGCTCTCTTGATTTTT +
Preference number: 1 (lower is better)
Translates to: DPQVLLYPVLHCVPT*LSLSPKPTGALLIF
Trigger: AAAAATCAAGAGAGCTCCAGTGGGCTTTGGAGAAAGAGAAAGCCAAGTTGGGACGCAGTGAAGAACGGGATAAAGAAGAACTTGAGGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR CCA 90 bp GATTATCCTAATGAGTGTGAAAGAATTTCAAAGAAAGGGGAGCTGTaGGTCTCGCACTGTGGTGCTGCCAAGATGTGGTTAAACTCAGAG +
Preference number: 1 (lower is better)
Translates to: DYPNECERISKKGEL*VSHCGAAKMWLNSE
Trigger: CTCTGAGTTTAACCACATCTTGGCAGCACCACAGTGCGAGACCCACAGCTCCCCTTTCTTTGAAATTCTTTCACACTCATTAGGATAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679457.1
3UTR TCA 90 bp CTCTTGGCACTTAAGGGACTCTGTTGCTTCTTGTTTCTGTCTAAATaGCTCACGCATCAACTCTGTCTGTGTCACTTTCGCATGTTCAAG +
Preference number: 1 (lower is better)
Translates to: LLALKGLCCFLFLSK*LTHQLCLCHFRMFK
Trigger: CTTGAACATGCGAAAGTGACACAGACAGAGTTGATGCGTGAGTCATTTAGACAGAAACAAGAAGCAACAGAGTCCCTTAAGTGCCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 90 bp TCCATTTGCCGCATATGTGCTTGCCTTAACAATTCCGTTGCCTGTTaGTGTTCTTGGTATTGTCGTACAAGTTCCTGTCTCATATCTTCC +
Preference number: 1 (lower is better)
Translates to: SICRICACLNNSVAC*CSWYCRTSSCLISS
Trigger: GGAAGATATGAGACAGGAACTTGTACGACAATACCAAGAACATCAACAGGCAACGGAATTGTTAAGGCAAGCACATATGCGGCAAATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 90 bp CCTGGAACCCACCCAGTAACAGCAGCAGGTATTTCTTCTGGTAAATaGGAGCCTTTCGAAAACTTTCTGCCCTCAAGTATTTACCATAAA +
Preference number: 1 (lower is better)
Translates to: PGTHPVTAAGISSGK*EPFENFLPSSIYHK
Trigger: TTTATGGTAAATACTTGAGGGCAGAAAGTTTTCGAAAGGCTCTCATTTACCAGAAGAAATACCTGCTGCTGTTACTGGGTGGGTTCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR TCA 90 bp GCTCTGTCTTTCATACTGCTGAGCTCCACTTGCATCTCCAGCATTTaGGACTGCTTCTGCTGTATATTATATTCCAAGAGTTCTACACAG +
Preference number: 1 (lower is better)
Translates to: ALSFILLSSTCISSI*DCFCCILYSKSSTQ
Trigger: CTGTGTAGAACTCTTGGAATATAATATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCAAGTGGAGCTCAGCAGTATGAAAGACAGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681216.1
3UTR GCA 90 bp TGTGCCATGTGTTGTCTTATTAATTCTTGTTTCATTTGCACTATCTaGTGCCCATACATCTCATCCAGCTCTGCCCGGAGTTGTTCTAAC +
Preference number: 1 (lower is better)
Translates to: CAMCCLINSCFICTI*CPYISSSSARSCSN
Trigger: GTTAGAACAACTCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAGAATTAATAAGACAACACATGGCACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR GCA 90 bp GAAGAATTATCTCTACCAGCTCCTGTCTGTCGATACCACCTGATCTaGTCTTCCAGCTTCATAACCATGTTCCTTAAGTCATTCTTCTCT +
Preference number: 1 (lower is better)
Translates to: EELSLPAPVCRYHLI*SSSFITMFLKSFFS
Trigger: AGAGAAGAATGACTTAAGGAACATGGTTATGAAGCTGGAAGAGCAGATCAGGTGGTATCGACAGACAGGAGCTGGTAGAGATAATTCTTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR TCA 90 bp AATCTTCTAATAAGTGGTCTTGTTCTTCAAGCTGCTGTTGATGAGTaGGGATCTGTTGTTTGGCTTGTAGTAAGTCTGCAGCTGTGCTAC +
Preference number: 1 (lower is better)
Translates to: NLLISGLVLQAAVDE*GSVVWLVVSLQLCY
Trigger: GTAGCACAGCTGCAGACTTACTACAAGCCAAACAACAGATCCTCACTCATCAACAGCAGCTTGAAGAACAAGACCACTTATTAGAAGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 90 bp GCTCTGTCTTTCATACTGCTGAGCTCCACTTGCATCTCCAGCATTTaGGACTGCTTCTGCTGTATATTATATTCCAAGAGTTCTGTAATC +
Preference number: 1 (lower is better)
Translates to: ALSFILLSSTCISSI*DCFCCILYSKSSVI
Trigger: GATTACAGAACTCTTGGAATATAATATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCAAGTGGAGCTCAGCAGTATGAAAGACAGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
3UTR TCA 90 bp CTACTCATTTCCCGAATTCGAACTTTCTCAGATTCAAGAAGTACCTaGAGCTCTAAGTTTCGACCTTGTTCTTCTGACAACTGGGCATCA +
Preference number: 1 (lower is better)
Translates to: LLISRIRTFSDSRST*SSKFRPCSSDNWAS
Trigger: TGATGCCCAGTTGTCAGAAGAACAAGGTCGAAACTTAGAGCTTCAGGTACTTCTTGAATCTGAGAAAGTTCGAATTCGGGAAATGAGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR GCA 90 bp GCCATGTGTTGTCTTATTAATTCTTGTTTCATTTGCACTATCTGCTaGCCATACATCTCATCCAGCTCTGCCCGGAGTTGTTCTAACTTT +
Preference number: 1 (lower is better)
Translates to: AMCCLINSCFICTIC*PYISSSSARSCSNF
Trigger: AAAGTTAGAACAACTCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAGAATTAATAAGACAACACATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 90 bp CCCCTGCTTGTCATGGTCACAACTCCATCTAATAAAGAGCTTACTTaGGTATCACATGACTGTACATTTTCTGCCCTGTTGTGGTTAATA +
Preference number: 1 (lower is better)
Translates to: PLLVMVTTPSNKELT*VSHDCTFSALLWLI
Trigger: TATTAACCACAACAGGGCAGAAAATGTACAGTCATGTGATACTCAAGTAAGCTCTTTATTAGATGGAGTTGTGACCATGACAAGCAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 90 bp AGCTTCATAACCATGTTCCTTAAGTCATTCTTCTCTTCAGTCAGTTaGCTGATATGCCCTGTCAGCTCAGCATTTTGTCTCAGTAGTCTT +
Preference number: 1 (lower is better)
Translates to: SFITMFLKSFFSSVS*LICPVSSAFCLSSL
Trigger: AAGACTACTGAGACAAAATGCTGAGCTGACAGGGCATATCAGTCAACTGACTGAAGAGAAGAATGACTTAAGGAACATGGTTATGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR CCA 90 bp TCACAAAACTGCAACCATTTACCTCTGAACTGCAGTCATCTGCTGTaGTTGAAATTTCACTTTCCAGAGAGTTCAGTACTATCTGTGGTT +
Preference number: 1 (lower is better)
Translates to: SQNCNHLPLNCSHLL*LKFHFPESSVLSVV
Trigger: AACCACAGATAGTACTGAACTCTCTGGAAAGTGAAATTTCAACCACAGCAGATGACTGCAGTTCAGAGGTAAATGGTTGCAGTTTTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR TCA 90 bp TGTTCAATTTCTAAATCTTCCTTCAGTTTGGAAAGCTCTTCTTCGTaGCTAAATAGAAGCTGTGTTCTCAGCCTCTCTAATTCAGCTTCT +
Preference number: 1 (lower is better)
Translates to: CSISKSSFSLESSSS*LNRSCVLSLSNSAS
Trigger: AGAAGCTGAATTAGAGAGGCTGAGAACACAGCTTCTATTTAGTCACGAAGAAGAGCTTTCCAAACTGAAGGAAGATTTAGAAATTGAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp AGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCAGCACTTTGGGAGGCTaGGGTGGGAGGGAGGACTGC +
Preference number: 2 (lower is better)
Translates to: SRSSEGKGGRDCPVPSLLSTLGG*GGREDC
Trigger: GCAGTCCTCCCTCCCACCTCAGCCTCCCAAAGTGCT...GAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp GAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 2 (lower is better)
Translates to: EGKGGRDCPVPSLLCSCATALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...CGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 2 (lower is better)
Translates to: LTADRNLVKPFGRLVITSTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 2 (lower is better)
Translates to: LTADRNLVKPFGRLVITSVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTGTACCATCACTGCTCTaGAGCTGTGCGTGCAATTCC +
Preference number: 2 (lower is better)
Translates to: LTADRNLVKPFGRLVITSVPSLL*SCACNS
Trigger: GGAATTGCACGCACAGCTGCAGAGCAGTGATGGTAC...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTGTACCATCACTGCTCTaGAGCTGTGCGTGCAATTCC +
Preference number: 2 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCVPSLL*SCACNS
Trigger: GGAATTGCACGCACAGCTGCAGAGCAGTGATGGTAC...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGTCTGTCCCTCAGTGTTaGCCTCCTGTTCTGTCTGCA +
Preference number: 2 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVSVPQC*PPVLSA
Trigger: TGCAGACAGAACAGGAGGCCAACACTGAGGGACAGA...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTCTTTTTCAGAGGCAATaGTGGCTTCAATGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: LTADRNLVKPFGRLVITSLFQRQ*WLQCWH
Trigger: GTGCCAACATTGAAGCCATCATTGCCTCTGAAAAAG...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTTGCTTCTGGAATTCCTaGATGATTCCTTGTAGTCGC +
Preference number: 2 (lower is better)
Translates to: LTADRNLVKPFGRLVITSCFWNS*MIPCSR
Trigger: GCGACTACAAGGAATCATGCAGGAATTCCAGAAGCA...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTCACTGCGTCCCAACTTaGCTTTCTCTTTCTCCAAAG +
Preference number: 2 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGHCVPT*LSLSPK
Trigger: CTTTGGAGAAAGAGAAAGCCAAGTTGGGACGCAGTG...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCCCAGCTAAAGACAGCTaGTTTAGTGCTTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LLMKALSKFLLALKGLCCPAKDS*FSASSS
Trigger: GGAGCTGGAAGCACTAAAGCAGCTGTCTTTAGCTGG...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTGGCCAGTTAATTTCTGTAGTGAACTCAGCTGCTCCTaGAGTTCCGTTGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: LGDTKLGSSPCWPVNFCSELSCS*SSVALS
Trigger: AGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTC...ACTACAGAAATTAACTGGCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGTCCTCTAGCTGTTTCTaGAGCTCTTTCAGTAGGTCC +
Preference number: 2 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVSSSCF*SSFSRS
Trigger: GGACCTACTGAAAGAGCTGCAGAAACAGCTAGAGGA...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCCTCATGGACACATaGCTTTACAGATGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: LLMKALSKFLLALKGLCCFLMDT*LYRCLC
Trigger: GCAGAGGCATCTGTAAAGTCATGTGTCCATGAGGAA...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCGCAACCATTTACCTCTaGACTGCAGTCATCTGCTGT +
Preference number: 2 (lower is better)
Translates to: LLMKALSKFLLALKGLCCATIYL*TAVICC
Trigger: ACAGCAGATGACTGCAGTTCAGAGGTAAATGGTTGC...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR-3UTR GCA 90 bp CACCATTTTCTCAGAACTCAGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATGGTGGGAGGGAGGACTaGTTAAGGCCAGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: HHFLRTQLLLQFRCSVFHGGRED*LRPGVQ
Trigger: TTGAACTCCTGGCCTTAAGCAGTCCTCCCTCCCACC...ATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTCTGAGAAAATGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTGGCCAGTTAATTTCTGTAGTTTCTCAGAACTCAGCTaGTCCTGCAGTTCCGTTGCT +
Preference number: 2 (lower is better)
Translates to: LGDTKLGSSPCWPVNFCSFSELS*SCSSVA
Trigger: AGCAACGGAACTGCAGGAGCAGCTGAGTTCTGAGAA...ACTACAGAAATTAACTGGCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCGAGAGGCAAATGCGTTaGGCTTCCATCTGTAGCCTT +
Preference number: 2 (lower is better)
Translates to: LMKALSKFLLALKGLCCFERQMR*ASICSL
Trigger: AAGGCTACAGATGGAAGCCCAACGCATTTGCCTCTC...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGCTCTCAGAGGCTTTCTaGGGTAGAACCTGTAGTTTT +
Preference number: 2 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVLSEAF*GRTCSF
Trigger: AAAACTACAGGTTCTACCCCAGAAAGCCTCTGAGAG...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp AAAACATGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACAGCACTTTGGGAGGCTaGGGTGGGAGGGAGGACTGC +
Preference number: 2 (lower is better)
Translates to: KTCNFSSLIRKVQDTSSYSTLGG*GGREDC
Trigger: GCAGTCCTCCCTCCCACCTCAGCCTCCCAAAGTGCT...GTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp TACTCTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACATCATTTCTAATTCATaGTTACAGCCGGTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: YSDGRPKPGEALWAIGDHIISNS*LQPVPP
Trigger: AGGAGGAACCGGCTGTAATCATGAATTAGAAATGAT...GTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTATCATTTCTAATTCATaGTTACAGCCGGTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGIISNS*LQPVPP
Trigger: AGGAGGAACCGGCTGTAATCATGAATTAGAAATGAT...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTATCCTTCAGCACCCCTaGTTGTCATGGTCACAACTC +
Preference number: 2 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVILQHP*LSWSQL
Trigger: GAGTTGTGACCATGACAAGCAGGGGTGCTGAAGGAT...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 2 (lower is better)
Translates to: CLDSNSLSSWICCCSASNAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCCTGATCCACATGAGTTaGATAAACCAGAGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: CSCSWSSRCLSICRICACLIHMS*INQREA
Trigger: TGCCTCTCTCTGGTTTATTCAACTCATGTGGATCAG...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCGACTCACTAACAGCTTaGAGCCTCTTCTGTAAACAG +
Preference number: 2 (lower is better)
Translates to: CSCSWSSRCLSICRICACDSLTA*SLFCKQ
Trigger: CTGTTTACAGAAGAGGCTTCAAGCTGTTAGTGAGTC...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCGGAGAACATTTCTTCTaGAATAGTCAGCACACAGTC +
Preference number: 2 (lower is better)
Translates to: LLMKALSKFLLALKGLCCGEHFF*NSQHTV
Trigger: GACTGTGTGCTGACTATTTCAGAAGAAATGTTCTCC...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCGCATGTTCAAGCTaGCTGCTAGTTTCACTTATG +
Preference number: 2 (lower is better)
Translates to: LLMKALSKFLLALKGLCCFACSS*LLVSLM
Trigger: CATAAGTGAAACTAGCAGTCAGCTTGAACATGCGAA...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGTTTCTGACTCTCAAGTaGAAACTTCAGATCCTCAAG +
Preference number: 2 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVFLTLK*KLQILK
Trigger: CTTGAGGATCTGAAGTTTTCACTTGAGAGTCAGAAA...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCTCTTCAATCTCATGCTaGTTCCCAGCCAACTCACTT +
Preference number: 2 (lower is better)
Translates to: CSCSWSSRCLSICRICACSSISC*FPANSL
Trigger: AAGTGAGTTGGCTGGGAAGCAGCATGAGATTGAAGA...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTAGCTCTTCAATCTCATaGTGCTTCCCAGCCAACTCA +
Preference number: 2 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVSSSIS*CFPANS
Trigger: TGAGTTGGCTGGGAAGCAGCATGAGATTGAAGAGCT...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTACCAGAGAGAGGCAAATaGGTTGGGCTTCCATCTGTA +
Preference number: 2 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLPERGK*VGLPSV
Trigger: TACAGATGGAAGCCCAACGCATTTGCCTCTCTCTGG...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCGCTGTCCCCAGATCTTaGTTAGTCGTGTTTGAAGTA +
Preference number: 2 (lower is better)
Translates to: LMKALSKFLLALKGLCCFAVPRS*LVVFEV
Trigger: TACTTCAAACACGACTAAGCAAGATCTGGGGACAGC...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCCACCCCTGCTTGTCATaGTCACAACTCCATCTAATA +
Preference number: 2 (lower is better)
Translates to: CSCSWSSRCLSICRICACHPCLS*SQLHLI
Trigger: TATTAGATGGAGTTGTGACCATGACAAGCAGGGGTG...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR CAA 90 bp AGAGAGTTCAGTACTATCTGTGGTTTCAGGTCTCCACTGGGGGTGTaGGACTATACTCTTGATATGGTTTGGCTGAGTTCCCCCATCCAA +
Preference number: 2 (lower is better)
Translates to: REFSTICGFRSPLGV*DYTLDMVWLSSPIQ
Trigger: TTGGATGGGGGAACTCAGCCAAACCATATCAAGAGTATAGTCCAACACCCCCAGTGGAGACCTGAAACCACAGATAGTACTGAACTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR-3UTR TCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCATTTACTTTAGAAACTaGTCCTTCAGCACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: CSCSWSSRCLSICRICACIYFRN*SFSTPA
Trigger: AGCAGGGGTGCTGAAGGATCAGTTTCTAAAGTAAAT...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCGGAGAACATTTCTTCTaGAATAGTCAGCACACAGTC +
Preference number: 2 (lower is better)
Translates to: LMKALSKFLLALKGLCCFGEHFF*NSQHTV
Trigger: GACTGTGTGCTGACTATTTCAGAAGAAATGTTCTCC...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTATTCCTCATGGACACATaGCTTTACAGATGCCTCTGC +
Preference number: 2 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLFLMDT*LYRCLC
Trigger: GCAGAGGCATCTGTAAAGTCATGTGTCCATGAGGAA...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGACGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 2 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp AAGCTCACTCTTCAGTTCAGCAACCACCATTTTCTCAGAACTCAGCTGCTCCTGTGTCTTTCATACTGCTaGGCTCCACTTGCATCTCCA +
Preference number: 2 (lower is better)
Translates to: KLTLQFSNHHFLRTQLLLCLSYC*APLASP
Trigger: TGGAGATGCAAGTGGAGCTCAGCAGTATGAAAGACA...CAGGAGCAGCTGAGTTCTGAGAAAATGGTGGTTGCTGAACTGAAGAGTGAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp TTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGAGTTGTGTAAGTCTGCAGCTGTaGTACTATGAGTGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: FICTICCPYISSSSARSCVSLQL*YYECCF
Trigger: GAAACAGCACTCATAGTAGCACAGCTGCAGACTTAC...ACAACTCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCCACACAGCATGTGCTTaGTTTGATGATGCAGTATTT +
Preference number: 2 (lower is better)
Translates to: LLMKALSKFLLALKGLCCHTACA*FDDAVF
Trigger: AAATACTGCATCATCAAAGCAAGCACATGCTGTGTG...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATTCTGTGTTTGCGTACTaGTGTTGCGCAGCTCACAAC +
Preference number: 2 (lower is better)
Translates to: THKKRLLQFSYSELQFLYSVFAY*CCAAHN
Trigger: GTTGTGAGCTGCGCAACAGCAGTACGCAAACACAGA...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TCGAACCAAAAATTTCATTCTGGAAATTGCAATGGATACTCTGACGGCCGACCGGAACTCAGCTGCTCCTaGAGTTCCGTTGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: SNQKFHSGNCNGYSDGRPELSCS*SSVALS
Trigger: AGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTC...CGGTCGGCCGTCAGAGTATCCATTGCAATTTCCAGAATGAAATTTTTGGTTCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTTCTTTTAGGTGTTTATaGTGTGCCTTGAGTGTTGTT +
Preference number: 2 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCSFRCL*CALSVV
Trigger: AACAACACTCAAGGCACAGCATAAACACCTAAAAGA...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCTCCATCATCTCTAGATaGGTCGGACTGTCTTGTGCT +
Preference number: 2 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTSIISR*VGLSCA
Trigger: AGCACAAGACAGTCCGACTCATCTAGAGATGATGGA...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCGCTGCAAAGAGGATATaGGGCTTTCTAATTCTTGAA +
Preference number: 2 (lower is better)
Translates to: CSCSWSSRCLSICRICACAAKRI*GFLILE
Trigger: TTCAAGAATTAGAAAGCCTCATATCCTCTTTGCAGC...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATCAGCACACAGTCCTTTaGTTCTGGTATATCATGGGG +
Preference number: 2 (lower is better)
Translates to: THKKRLLQFSYSELQFLYQHTVL*FWYIMG
Trigger: CCCCATGATATACCAGAATCAAAGGACTGTGTGCTG...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CCCGCTCCCTATCTAGGGTACTACTCATTTCCCGAATTCGAACTTTCTCAGATTGCCTGGGCAACATGGTaGAACTCTGTCTCTACTAAA +
Preference number: 2 (lower is better)
Translates to: PAPYLGYYSFPEFELSQIAWATW*NSVSTK
Trigger: TTTAGTAGAGACAGAGTTTCACCATGTTGCCCAGGC...AATCTGAGAAAGTTCGAATTCGGGAAATGAGTAGTACCCTAGATAGGGAGCGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp TCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTATCATTTCTAATTCATaGTTACAGCCGGTTCCTCCT +
Preference number: 2 (lower is better)
Translates to: SMSHKKYLGTPSWALHLAIISNS*LQPVPP
Trigger: AGGAGGAACCGGCTGTAATCATGAATTAGAAATGAT...AGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTATCTTCAATCTCATGCTaGTTCCCAGCCAACTCACTT +
Preference number: 2 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLSSISC*FPANSL
Trigger: AAGTGAGTTGGCTGGGAAGCAGCATGAGATTGAAGA...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTTCAAATTCTTGTAACTaGTGCAGTCCTTCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVSNSCN*CSPSVP
Trigger: TGGGACTGAAGGACTGCAGCAGTTACAAGAATTTGA...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTTTCATTTGCACTATCTaGTGCCCATACATCTCATCC +
Preference number: 2 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVFICTI*CPYISS
Trigger: GGATGAGATGTATGGGCAGCAGATAGTGCAAATGAA...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATTGCCGCATATGTGCTTaGCTTAACAATTCCGTTGCC +
Preference number: 2 (lower is better)
Translates to: THKKRLLQFSYSELQFLYCRICA*LNNSVA
Trigger: GGCAACGGAATTGTTAAGGCAAGCACATATGCGGCA...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TTTTCAGGGTCTATTTCAGTTCCAGCAAAACCACTCCTCACAAGTCGTTGTGACTTTGCGTACTGCTGTTaGGCAGCTCACAACACAGCT +
Preference number: 2 (lower is better)
Translates to: FSGSISVPAKPLLTSRCDFAYCC*AAHNTA
Trigger: AGCTGTGTTGTGAGCTGCGCAACAGCAGTACGCAAA...GTCACAACGACTTGTGAGGAGTGGTTTTGCTGGAACTGAAATAGACCCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATTTTGCGTACTGCTGTTaGGCAGCTCACAACACAGCT +
Preference number: 2 (lower is better)
Translates to: CLDSNSLSSWICCCSASNFAYCC*AAHNTA
Trigger: AGCTGTGTTGTGAGCTGCGCAACAGCAGTACGCAAA...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCAACTGGGCCTGCCTCTaGTTTCATAGCTTCCTTTTG +
Preference number: 2 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTNWACL*FHSFLL
Trigger: CAAAAGGAAGCTATGAAAGCAGAGGCAGGCCCAGTT...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCTCATCACAAAACTaGAACCATTTACCTCTGAAC +
Preference number: 2 (lower is better)
Translates to: LLMKALSKFLLALKGLCCFSSQN*NHLPLN
Trigger: GTTCAGAGGTAAATGGTTGCAGTTTTGTGATGAGAA...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTTTGTTTTCATGTGCTaGCAAGGGATTTGTATACAA +
Preference number: 2 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRFVFMC*QGICIQ
Trigger: TTGTATACAAATCCCTTGCCAGCACATGAAAACAAA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
3UTR-3UTR CCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTACACCCCTGCTTGTCATaGTCACAACTCCATCTAATA +
Preference number: 2 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLHPCLS*SQLHLI
Trigger: TATTAGATGGAGTTGTGACCATGACAAGCAGGGGTG...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp TTTTCAGGGTCTATTTCAGTTCCAGCAAAACCACTCCTCACAAGTCGTTGTGACTCTTGTAGCTGTTCCTaGTCTTCTCGCTGTCTCTCC +
Preference number: 2 (lower is better)
Translates to: FSGSISVPAKPLLTSRCDSCSCS*SSRCLS
Trigger: GGAGAGACAGCGAGAAGACCAGGAACAGCTACAAGA...GTCACAACGACTTGTGAGGAGTGGTTTTGCTGGAACTGAAATAGACCCTGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp AATATTGATGGAAACAGAACCTGTGACTCGATGCCACCGTCGAACCAAAAATTTGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: NIDGNRTCDSMPPSNQKFATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...AAATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTTTCCATCAATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR CAA 90 bp GCTGTCTCTCCATTTGCCGCATATGTGCTTGCCTTAACAATTCCGTaGCCTGTTGATGTTCTTGGTATTGTCGTACAAGTTCCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: AVSPFAAYVLALTIP*PVDVLGIVVQVPVS
Trigger: TGAGACAGGAACTTGTACGACAATACCAAGAACATCAACAGGCAACGGAATTGTTAAGGCAAGCACATATGCGGCAAATGGAGAGACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR CAA 90 bp CTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCCACTaGCATCTCCAGCATTTGAGACTGCTTCTGCTGTATATTATATTC +
Preference number: 2 (lower is better)
Translates to: LLQFRCSVFHTAELH*HLQHLRLLLLYIIF
Trigger: GAATATAATATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCAAGTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR CAA 90 bp AGATCCTCAAGTTCTTCTTTATCCCGTTCTTCACTGCGTCCCAACTaGGCTTTCTCTTTCTCCAAAGCCCACTGGAGCTCTCTTGATTTT +
Preference number: 2 (lower is better)
Translates to: RSSSSSLSRSSLRPN*AFSFSKAHWSSLDF
Trigger: AAAATCAAGAGAGCTCCAGTGGGCTTTGGAGAAAGAGAAAGCCAAGTTGGGACGCAGTGAAGAACGGGATAAAGAAGAACTTGAGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCGCTGCTGTTGATGAGTaGGGATCTGTTGTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHIAAVDE*GSVVWL
Trigger: AAGCCAAACAACAGATCCTCACTCATCAACAGCAGC...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCTCATTTTCACTTGGTTaGGTTGCTCTAAGTGATGAT +
Preference number: 2 (lower is better)
Translates to: CSCSWSSRCLSICRICACSFSLG*VALSDD
Trigger: ATCATCACTTAGAGCAACTCAACCAAGTGAAAATGA...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCAACTGGTGTATTTTCTaGAGTTCCTTGATCTTTTCC +
Preference number: 2 (lower is better)
Translates to: LMKALSKFLLALKGLCCFNWCIF*SSLIFS
Trigger: GGAAAAGATCAAGGAACTTCAGAAAATACACCAGTT...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCCACCCTCTCTCTCTCTaGAACCAGGTTTTCATTATC +
Preference number: 2 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTHPLSL*NQVFII
Trigger: GATAATGAAAACCTGGTTTCAGAGAGAGAGAGGGTG...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TTTCAGTCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACTTTCCTGAACCCAAATaGAATCTTCATCATCTGCTG +
Preference number: 2 (lower is better)
Translates to: FQSMSHKKYLGTPSWALHFPEPK*NLHHLL
Trigger: CAGCAGATGATGAAGATTTCATTTGGGTTCAGGAAA...GTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCTTTCCATTCTGTGTTTaGGTACTGCTGTTGCGCAGC +
Preference number: 2 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHIFPFCV*VLLLRS
Trigger: GCTGCGCAACAGCAGTACGCAAACACAGAATGGAAA...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TTTCTTAGTTCAGCTTTCAGTTTGTATACTTCAGCCTCTGCCCTTTTCAAAGATACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 2 (lower is better)
Translates to: FLSSAFSLYTSASALFKDTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...ATCTTTGAAAAGGGCAGAGGCTGAAGTATACAAACTGAAAGCTGAACTAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CAGGGCTCAGAGTTTGAAGTAAAGAGTCATTTCTTAGTTCAGCTTTCAGTTTGTGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 2 (lower is better)
Translates to: QGSEFEVKSHFLVQLSVCVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...ACAAACTGAAAGCTGAACTAAGAAATGACTCTTTACTTCAAACTCTGAGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp TTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTCACTGGTGCTCATTGTaGATTTTGTGTCATCAGTCC +
Preference number: 2 (lower is better)
Translates to: LPLSAMRYLGIRSPVRLCHWCSL*ILCHQS
Trigger: GGACTGATGACACAAAATGCACAATGAGCACCAGTG...ACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
3UTR-3UTR CCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCAAATTAGCAGTGAGCTaGGTTATAATGCCATCTCTT +
Preference number: 2 (lower is better)
Translates to: LMKALSKFLLALKGLCCFKLAVS*VIMPSL
Trigger: AAGAGATGGCATTATAACCCAGCTCACTGCTAATTT...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCGGTTTTCATTATCTATaGAGGATCTCTGGGCTAATT +
Preference number: 2 (lower is better)
Translates to: LMKALSKFLLALKGLCCFGFHYL*RISGLI
Trigger: AATTAGCCCAGAGATCCTCCATAGATAATGAAAACC...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp CAGGGCTCAGAGTTTGAAGTAAAGAGTCATTTCTTAGTTCAGCTTTCAGTTTGTGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: QGSEFEVKSHFLVQLSVCATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...ACAAACTGAAAGCTGAACTAAGAAATGACTCTTTACTTCAAACTCTGAGCCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp ACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGAATCGCTGCTGTTGATGAGTaGGGATCTGTTGTTTGGCTT +
Preference number: 2 (lower is better)
Translates to: TSRVHCSLCIRFCNYHRIAAVDE*GSVVWL
Trigger: AAGCCAAACAACAGATCCTCACTCATCAACAGCAGC...GATTCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATGTCTGTCTAGCTCTCTaGATCTGTTCCCTTGAAAAG +
Preference number: 2 (lower is better)
Translates to: CLDSNSLSSWICCCSASNVCLAL*ICSLEK
Trigger: CTTTTCAAGGGAACAGATTCAGAGAGCTAGACAGAC...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTCTCTCTACATCTCAATaGAACTTGTTCTTTCTCTTG +
Preference number: 2 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVLSTSQ*NLFFLL
Trigger: CAAGAGAAAGAACAAGTTTCATTGAGATGTAGAGAG...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTCTGATCCACATGAGTTaGATAAACCAGAGAGAGGCA +
Preference number: 2 (lower is better)
Translates to: ASRSACNCTSRDNSGLASLIHMS*INQREA
Trigger: TGCCTCTCTCTGGTTTATTCAACTCATGTGGATCAG...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATGACTCACTAACAGCTTaGAGCCTCTTCTGTAAACAG +
Preference number: 2 (lower is better)
Translates to: CLDSNSLSSWICCCSASNDSLTA*SLFCKQ
Trigger: CTGTTTACAGAAGAGGCTTCAAGCTGTTAGTGAGTC...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCCACCCTCTCTCTCTCTaGAACCAGGTTTTCATTATC +
Preference number: 2 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHIHPLSL*NQVFII
Trigger: GATAATGAAAACCTGGTTTCAGAGAGAGAGAGGGTG...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATGTCATCTGCTGTGGTTaGAATTTCACTTTCCAGAGA +
Preference number: 2 (lower is better)
Translates to: THKKRLLQFSYSELQFLYVICCG*NFTFQR
Trigger: TCTCTGGAAAGTGAAATTTCAACCACAGCAGATGAC...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR-3UTR GCA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCATTTGCACTATCTGCTaGCCATACATCTCATCCAGC +
Preference number: 2 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHIICTIC*PYISSS
Trigger: GCTGGATGAGATGTATGGGCAGCAGATAGTGCAAAT...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCTTCATTTGCACTATCTaGTGCCCATACATCTCATCC +
Preference number: 2 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTFICTI*CPYISS
Trigger: GGATGAGATGTATGGGCAGCAGATAGTGCAAATGAA...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGACCAGCTAAAGACAGCTaGTTTAGTGCTTCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRPAKDS*FSASSS
Trigger: GGAGCTGGAAGCACTAAAGCAGCTGTCTTTAGCTGG...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATTCTGCCTCCAATTCTTaGAACCTGTTACTTGCACAT +
Preference number: 2 (lower is better)
Translates to: THKKRLLQFSYSELQFLYSASNS*NLLLAH
Trigger: ATGTGCAAGTAACAGGTTGCAAGAATTGGAGGCAGA...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TTTCTTAGTTCAGCTTTCAGTTTGTATACTTCAGCCTCTGCCCTTTTCAAAGATGGTGGGAGGGAGGACTaGTTAAGGCCAGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: FLSSAFSLYTSASALFKDGGRED*LRPGVQ
Trigger: TTGAACTCCTGGCCTTAAGCAGTCCTCCCTCCCACC...ATCTTTGAAAAGGGCAGAGGCTGAAGTATACAAACTGAAAGCTGAACTAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp CAAAAATTTCATTCTGGAAATTGCAATGGATACTCTGACGGCCGACCGAAACCTCTGGGCTCTTCACCTTaGTGGCCAGTTAATTTCTGT +
Preference number: 2 (lower is better)
Translates to: QKFHSGNCNGYSDGRPKPLGSSP*WPVNFC
Trigger: ACAGAAATTAACTGGCCAGCAAGGTGAAGAGCCCAG...AGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAATTTCCAGAATGAAATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp TTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTTACCTTGCACACTGGTaGTCATTGTGCATTTTGTGT +
Preference number: 2 (lower is better)
Translates to: LPLSAMRYLGIRSPVRLCYLAHW*SLCILC
Trigger: ACACAAAATGCACAATGAGCACCAGTGTGCAAGGTA...ACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
3UTR-3UTR GCA 90 bp TTTTCAGGGTCTATTTCAGTTCCAGCAAAACCACTCCTCACAAGTCGTTGTGACCATTTACCTCTGAACTaGAGTCATCTGCTGTGGTTG +
Preference number: 2 (lower is better)
Translates to: FSGSISVPAKPLLTSRCDHLPLN*SHLLWL
Trigger: CAACCACAGCAGATGACTGCAGTTCAGAGGTAAATG...GTCACAACGACTTGTGAGGAGTGGTTTTGCTGGAACTGAAATAGACCCTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR-3UTR CCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCTTTTCTGCCCTGTTGTaGTTAATAATGATTTCTAGC +
Preference number: 2 (lower is better)
Translates to: LMKALSKFLLALKGLCCFFSALL*LIMISS
Trigger: GCTAGAAATCATTATTAACCACAACAGGGCAGAAAA...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTGGTTTTCATTATCTATaGAGGATCTCTGGGCTAATT +
Preference number: 2 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVGFHYL*RISGLI
Trigger: AATTAGCCCAGAGATCCTCCATAGATAATGAAAACC...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TTTTCAGGGTCTATTTCAGTTCCAGCAAAACCACTCCTCACAAGTCGTTGTGACAATTCCGTTGCCTGTTaGTGTTCTTGGTATTGTCGT +
Preference number: 2 (lower is better)
Translates to: FSGSISVPAKPLLTSRCDNSVAC*CSWYCR
Trigger: ACGACAATACCAAGAACATCAACAGGCAACGGAATT...GTCACAACGACTTGTGAGGAGTGGTTTTGCTGGAACTGAAATAGACCCTGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CAAAAATTTCATTCTGGAAATTGCAATGGATACTCTGACGGCCGACCGAAACCTCTTTTTCAGAGGCAATaGTGGCTTCAATGTTGGCAC +
Preference number: 2 (lower is better)
Translates to: QKFHSGNCNGYSDGRPKPLFQRQ*WLQCWH
Trigger: GTGCCAACATTGAAGCCATCATTGCCTCTGAAAAAG...AGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAATTTCCAGAATGAAATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTCTGTGCTACTATGAGTaGTGTTTCTCAGAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: ASRSACNCTSRDNSGLASLCYYE*CFSEFH
Trigger: GTGAAACTCTGAGAAACAGCACTCATAGTAGCACAG...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATCTGTGCTACTATGAGTaGTGTTTCTCAGAGTTTCAC +
Preference number: 2 (lower is better)
Translates to: CLDSNSLSSWICCCSASNLCYYE*CFSEFH
Trigger: GTGAAACTCTGAGAAACAGCACTCATAGTAGCACAG...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACAACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGAGTAAGTCTGCAGCTGTaGTACTATGAGTGCTGTTTC +
Preference number: 2 (lower is better)
Translates to: TTSRVHCSLCIRFCNYHRVSLQL*YYECCF
Trigger: GAAACAGCACTCATAGTAGCACAGCTGCAGACTTAC...TCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACAACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGAATTTGCACTATCTGCTaGCCATACATCTCATCCAGC +
Preference number: 2 (lower is better)
Translates to: TTSRVHCSLCIRFCNYHRICTIC*PYISSS
Trigger: GCTGGATGAGATGTATGGGCAGCAGATAGTGCAAAT...TCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTAAATTCTTGTTTCATTTaGACTATCTGCTGCCCATAC +
Preference number: 2 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLNSCFI*TICCPY
Trigger: GTATGGGCAGCAGATAGTGCAAATGAAACAAGAATT...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGATTGTTCAACTGGGCCTaGCTCTGCTTTCATAGCTTC +
Preference number: 2 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRLFNWA*LCFHSF
Trigger: GAAGCTATGAAAGCAGAGGCAGGCCCAGTTGAACAA...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTATCTATGGAGGATCTCTaGGCTAATTGTCTATTAAGT +
Preference number: 2 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLSMEDL*ANCLLS
Trigger: ACTTAATAGACAATTAGCCCAGAGATCCTCCATAGA...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCTGTTCACTGATAGGCTaGAATCGAGGAACAACCTTA +
Preference number: 2 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHICSLIG*NRGTTL
Trigger: TAAGGTTGTTCCTCGATTCCAGCCTATCAGTGAACA...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp GAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCACCAGAAGAATCTAGTTCTTGCTTCTaGAATTCCTGCATGATTCCT +
Preference number: 2 (lower is better)
Translates to: ERYVVCLGSPYNSSPPEESSSCF*NSCMIP
Trigger: AGGAATCATGCAGGAATTCCAGAAGCAAGAACTAGA...TTCTTCTGGTGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR CAA 90 bp CTTGGATCTGCTGTTGCTCTGCCTCCAATTCTTGCAACCTGTTACTaGCACATAACAACTCCTGCTCAAGACGATCTATTATATCAGTTT +
Preference number: 2 (lower is better)
Translates to: LGSAVALPPILATCY*HITTPAQDDLLYQF
Trigger: AAACTGATATAATAGATCGTCTTGAGCAGGAGTTGTTATGTGCAAGTAACAGGTTGCAAGAATTGGAGGCAGAGCAACAGCAGATCCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATGAAAGCTCTTCTTCGTaGCTAAATAGAAGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: CLDSNSLSSWICCCSASNESSSS*LNRSCV
Trigger: AACACAGCTTCTATTTAGTCACGAAGAAGAGCTTTC...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCAATCATCTTTTACTTTaGGAAGGCAAGCATACTCCT +
Preference number: 2 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTNHLLL*EGKHTP
Trigger: AGGAGTATGCTTGCCTTCTCAAAGTAAAAGATGATT...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCTCATTTTCACTTGGTTaGGTTGCTCTAAGTGATGAT +
Preference number: 2 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTSFSLG*VALSDD
Trigger: ATCATCACTTAGAGCAACTCAACCAAGTGAAAATGA...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCAACTGGTGTATTTTCTaGAGTTCCTTGATCTTTTCC +
Preference number: 2 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTNWCIF*SSLIFS
Trigger: GGAAAAGATCAAGGAACTTCAGAAAATACACCAGTT...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCGCTGCAAAGAGGATATaGGGCTTTCTAATTCTTGAA +
Preference number: 2 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHIAAKRI*GFLILE
Trigger: TTCAAGAATTAGAAAGCCTCATATCCTCTTTGCAGC...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGTGCATCTCCAGCATTTaGGACTGCTTCTGCTGTATA +
Preference number: 2 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMCISSI*DCFCCI
Trigger: TATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCA...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp CCTGTGACTCGATGCCACCGTCGAACCAAAAATTTCATTCTGGAAATTGCAATGTTTCTGACTCTCAAGTaGAAACTTCAGATCCTCAAG +
Preference number: 2 (lower is better)
Translates to: PVTRCHRRTKNFILEIAMFLTLK*KLQILK
Trigger: CTTGAGGATCTGAAGTTTTCACTTGAGAGTCAGAAA...CATTGCAATTTCCAGAATGAAATTTTTGGTTCGACGGTGGCATCGAGTCACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp TCTCCAAATTCAAGTTTCATACCATCTGTCTGCTGTCCCCAGATCTTGCTTAGTAGTCGGACTGTCTTGTaGTCCTTGTTCAGAATAAGA +
Preference number: 2 (lower is better)
Translates to: SPNSSFIPSVCCPQILLSSRTVL*SLFRIR
Trigger: TCTTATTCTGAACAAGGAGCACAAGACAGTCCGACT...ACTAAGCAAGATCTGGGGACAGCAGACAGATGGTATGAAACTTGAATTTGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGAGCTGTCCCCAGATCTTaGTTAGTCGTGTTTGAAGTA +
Preference number: 2 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRAVPRS*LVVFEV
Trigger: TACTTCAAACACGACTAAGCAAGATCTGGGGACAGC...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTTCTGTGTTTGCGTACTaGTGTTGCGCAGCTCACAAC +
Preference number: 2 (lower is better)
Translates to: IYSHVNTILWYALNLFHTSVFAY*CCAAHN
Trigger: GTTGTGAGCTGCGCAACAGCAGTACGCAAACACAGA...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTAATTAGCTTTCTGGAGTaGATACCTTTCATTAGACAA +
Preference number: 2 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLISFLE*IPFIRQ
Trigger: TTGTCTAATGAAAGGTATGCACTCCAGAAAGCTAAT...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGGAGAGGCAAATGCGTTaGGCTTCCATCTGTAGCCTT +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKERQMR*ASICSL
Trigger: AAGGCTACAGATGGAAGCCCAACGCATTTGCCTCTC...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGAACCTCCAAATTAGGCTaGCAGATGACTGGCTTTTAC +
Preference number: 2 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRTSKLG*QMTGFY
Trigger: GTAAAAGCCAGTCATCTGCCAGCCTAATTTGGAGGT...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp CCTGTGACTCGATGCCACCGTCGAACCAAAAATTTCATTCTGGAAATTGCAATGTGTTCTTCTGACAACTaGGCATCATATAGCATTCTC +
Preference number: 2 (lower is better)
Translates to: PVTRCHRRTKNFILEIAMCSSDN*ASYSIL
Trigger: GAGAATGCTATATGATGCCCAGTTGTCAGAAGAACA...CATTGCAATTTCCAGAATGAAATTTTTGGTTCGACGGTGGCATCGAGTCACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGGGCTCTTCACCTTGCTaGCCAGTTAATTTCTGTAGT +
Preference number: 2 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMGSSPC*PVNFCS
Trigger: ACTACAGAAATTAACTGGCCAGCAAGGTGAAGAGCC...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATGAATACATTGTTGTTTaGGGTCCTCATTTTCCTCTA +
Preference number: 2 (lower is better)
Translates to: CLDSNSLSSWICCCSASNEYIVV*GPHFPL
Trigger: TAGAGGAAAATGAGGACCTCAAACAACAATGTATTC...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp AGAGGCAAATGCGTTGGGCTTCCATCTGTAGCCTTAAATCATTCTGTTCTGATTTACTTGAGTATCACATaGCTGTACATTTTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: RGKCVGLPSVALNHSVLIYLSIT*LYIFCP
Trigger: AGGGCAGAAAATGTACAGTCATGTGATACTCAAGTA...AATCAGAACAGAATGATTTAAGGCTACAGATGGAAGCCCAACGCATTTGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TTTTCAGGGTCTATTTCAGTTCCAGCAAAACCACTCCTCACAAGTCGTTGTGACGTTACAGATGGTAAGTaGTCCAAAATCAACTGTTCT +
Preference number: 2 (lower is better)
Translates to: FSGSISVPAKPLLTSRCDVTDGK*SKINCS
Trigger: AGAACAGTTGATTTTGGATCACTTACCATCTGTAAC...GTCACAACGACTTGTGAGGAGTGGTTTTGCTGGAACTGAAATAGACCCTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATATTAGCTTTCTGGAGTaGATACCTTTCATTAGACAA +
Preference number: 2 (lower is better)
Translates to: THKKRLLQFSYSELQFLYISFLE*IPFIRQ
Trigger: TTGTCTAATGAAAGGTATGCACTCCAGAAAGCTAAT...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTGCATCTCGTTCAGCCTaGAATTGTACTTCTAGGGAC +
Preference number: 2 (lower is better)
Translates to: IYSHVNTILWYALNLFHTASRSA*NCTSRD
Trigger: GTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CCTGTGACTCGATGCCACCGTCGAACCAAAAATTTCATTCTGGAAATTGCAATGTTCCAATTTAGTTTGTaGAAGCTCACTCTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: PVTRCHRRTKNFILEIAMFQFSL*KLTLQF
Trigger: GAACTGAAGAGTGAGCTTGCACAAACTAAATTGGAA...CATTGCAATTTCCAGAATGAAATTTTTGGTTCGACGGTGGCATCGAGTCACAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp ACTCGATGCCACCGTCGAACCAAAAATTTCATTCTGGAAATTGCAATGGATACTTCTCGTTCTAGTTCTTaGTTCTGGAATTCCTGCATG +
Preference number: 2 (lower is better)
Translates to: TRCHRRTKNFILEIAMDTSRSSS*FWNSCM
Trigger: CATGCAGGAATTCCAGAAGCAAGAACTAGAACGAGA...AGTATCCATTGCAATTTCCAGAATGAAATTTTTGGTTCGACGGTGGCATCGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp GGAAATTCAACTGATTTCAAATTACATTGCTACCTGTATCAGACCCACCAGAGTCACTGGTGCTCATTGTaGATTTTGTGTCATCAGTCC +
Preference number: 2 (lower is better)
Translates to: GNSTDFKLHCYLYQTHQSHWCSL*ILCHQS
Trigger: GGACTGATGACACAAAATGCACAATGAGCACCAGTG...ACTCTGGTGGGTCTGATACAGGTAGCAATGTAATTTGAAATCAGTTGAATTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
3UTR-3UTR GCA 90 bp AAACAGGAAATTCAACTGATTTCAAATTACATTGCTACCTGTATCAGACCCACCGGCCTTACCACTTTCTaGCATGCGCTACTTAGGAAT +
Preference number: 2 (lower is better)
Translates to: KQEIQLISNYIATCIRPTGLTTF*HALLRN
Trigger: ATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCC...GGTGGGTCTGATACAGGTAGCAATGTAATTTGAAATCAGTTGAATTTCCTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
3UTR-3UTR CCA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTTCTATGGAGGATCTCTaGGCTAATTGTCTATTAAGT +
Preference number: 2 (lower is better)
Translates to: ASRSACNCTSRDNSGLASSMEDL*ANCLLS
Trigger: ACTTAATAGACAATTAGCCCAGAGATCCTCCATAGA...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp ACAACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGATGCAGTCATCTGCTGTaGTTGAAATTTCACTTTCCA +
Preference number: 2 (lower is better)
Translates to: TTSRVHCSLCIRFCNYHRCSHLL*LKFHFP
Trigger: TGGAAAGTGAAATTTCAACCACAGCAGATGACTGCA...TCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR CAA 90 bp TCTCTGTTCCATACTTCTTTTTCAGAGGCAATGATGGCTTCAATGTaGGCACCACCATTCAATGAAAACCTGGAAGAATTATCTCTACCA +
Preference number: 2 (lower is better)
Translates to: SLFHTSFSEAMMASM*APPFNENLEELSLP
Trigger: TGGTAGAGATAATTCTTCCAGGTTTTCATTGAATGGTGGTGCCAACATTGAAGCCATCATTGCCTCTGAAAAAGAAGTATGGAACAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp CATTTCTTAGTTCAGCTTTCAGTTTGTATACTTCAGCCTCTGCCCTTTTCAAAGGATTCAAGAAGTACCTaGAGCTCTAAGTTTCGACCT +
Preference number: 2 (lower is better)
Translates to: HFLVQLSVCILQPLPFSKDSRST*SSKFRP
Trigger: AGGTCGAAACTTAGAGCTTCAGGTACTTCTTGAATC...CTTTGAAAAGGGCAGAGGCTGAAGTATACAAACTGAAAGCTGAACTAAGAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp CAAAAATTTCATTCTGGAAATTGCAATGGATACTCTGACGGCCGACCGAAACCTGGCTCATTAAGGTTCTaGTACAGAATTCTTCTACTT +
Preference number: 2 (lower is better)
Translates to: QKFHSGNCNGYSDGRPKPGSLRF*YRILLL
Trigger: AAGTAGAAGAATTCTGTATCAGAACCTTAATGAGCC...AGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAATTTCCAGAATGAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR TCA 90 bp ACTCGATGCCACCGTCGAACCAAAAATTTCATTCTGGAAATTGCAATGGATACTTTTCCTGAACCCAAATaGAATCTTCATCATCTGCTG +
Preference number: 2 (lower is better)
Translates to: TRCHRRTKNFILEIAMDTFPEPK*NLHHLL
Trigger: CAGCAGATGATGAAGATTTCATTTGGGTTCAGGAAA...AGTATCCATTGCAATTTCCAGAATGAAATTTTTGGTTCGACGGTGGCATCGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR GCA 90 bp AGAGGCAAATGCGTTGGGCTTCCATCTGTAGCCTTAAATCATTCTGTTCTGATTAATTCTTGTTTCATTTaGACTATCTGCTGCCCATAC +
Preference number: 2 (lower is better)
Translates to: RGKCVGLPSVALNHSVLINSCFI*TICCPY
Trigger: GTATGGGCAGCAGATAGTGCAAATGAAACAAGAATT...AATCAGAACAGAATGATTTAAGGCTACAGATGGAAGCCCAACGCATTTGCCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCTCTCTGTCAATGGCTTaGTCATCTAAAAATTTTCTC +
Preference number: 2 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHISLSMA*SSKNFL
Trigger: GAGAAAATTTTTAGATGAGCAAGCCATTGACAGAGA...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTTTAGCGGTTTCTACTTaGTGTTCCAAGGCCAGCTTT +
Preference number: 2 (lower is better)
Translates to: IYSHVNTILWYALNLFHTLAVST*CSKASF
Trigger: AAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAA...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp GCTGTGTTCATATTGGTCCCATTGAATATTCACAATACAAAAGCACAAAAGAACTCCTCTAGCTGTTTCTaGAGCTCTTTCAGTAGGTCC +
Preference number: 2 (lower is better)
Translates to: AVFILVPLNIHNTKAQKNSSSCF*SSFSRS
Trigger: GGACCTACTGAAAGAGCTGCAGAAACAGCTAGAGGA...GTTCTTTTGTGCTTTTGTATTGTGAATATTCAATGGGACCAATATGAACACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CCA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTATTCTAGTTCCTTTCTaGATTCAGATGCAGAAACAA +
Preference number: 2 (lower is better)
Translates to: ASRSACNCTSRDNSGLASILVPF*IQMQKQ
Trigger: TTGTTTCTGCATCTGAATCCAGAAAGGAACTAGAAT...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTTTTTCTGCCCTGTTGTaGTTAATAATGATTTCTAGC +
Preference number: 2 (lower is better)
Translates to: ASRSACNCTSRDNSGLASFSALL*LIMISS
Trigger: GCTAGAAATCATTATTAACCACAACAGGGCAGAAAA...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTTCTCGAAGTTCCTCTTaGCACTTAAGGGACTCTGTT +
Preference number: 2 (lower is better)
Translates to: IYSHVNTILWYALNLFHTSRSSS*HLRDSV
Trigger: AACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGA...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp TCGAACCAAAAATTTCATTCTGGAAATTGCAATGGATACTCTGACGGCCGACCGCATTCAATGAAAACCTaGAAGAATTATCTCTACCAG +
Preference number: 2 (lower is better)
Translates to: SNQKFHSGNCNGYSDGRPHSMKT*KNYLYQ
Trigger: CTGGTAGAGATAATTCTTCCAGGTTTTCATTGAATG...CGGTCGGCCGTCAGAGTATCCATTGCAATTTCCAGAATGAAATTTTTGGTTCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR CAA 90 bp TATCTTTTTCATTTTCCATATATTCACGAACCTGATCCACATGAGTaGAATAAACCAGAGAGAGGCAAATGCGTTGGGCTTCCATCTGTA +
Preference number: 2 (lower is better)
Translates to: YLFHFPYIHEPDPHE*NKPERGKCVGLPSV
Trigger: TACAGATGGAAGCCCAACGCATTTGCCTCTCTCTGGTTTATTCAACTCATGTGGATCAGGTTCGTGAATATATGGAAAATGAAAAAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR CAA 90 bp AAGTACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTaGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCCAATTG +
Preference number: 2 (lower is better)
Translates to: KYIFHEGHFFISGFY*LFQGQLFSYNHIQL
Trigger: CAATTGGATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGTACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTATTTACTTTAGAAACTaGTCCTTCAGCACCCCTGCT +
Preference number: 2 (lower is better)
Translates to: IYSHVNTILWYALNLFHTIYFRN*SFSTPA
Trigger: AGCAGGGGTGCTGAAGGATCAGTTTCTAAAGTAAAT...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGAGTTACAGATGGTAAGTaGTCCAAAATCAACTGTTCT +
Preference number: 2 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRVTDGK*SKINCS
Trigger: AGAACAGTTGATTTTGGATCACTTACCATCTGTAAC...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGTCTTGTATATCCCTTTaGAGCTGCTCTTTAGAGAGC +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKSCISL*SCSLES
Trigger: GCTCTCTAAAGAGCAGCTTCAAAGGGATATACAAGA...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGTCTTCTGAGAGGGAATaGGCATTCATTGATGTCTTC +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKSSERE*AFIDVF
Trigger: GAAGACATCAATGAATGCTCATTCCCTCTCAGAAGA...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGAGTTCTCTCTTTAAGCTaGATAATTCCTGTGTTAGCT +
Preference number: 2 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRVLSLS*IIPVLA
Trigger: AGCTAACACAGGAATTATTCAGCTTAAAGAGAGAAC...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp GGAAATTCAACTGATTTCAAATTACATTGCTACCTGTATCAGACCCACCAGAGTATGATTCAAAGTCTCTaGATCAGGAGTGAACTGAAG +
Preference number: 2 (lower is better)
Translates to: GNSTDFKLHCYLYQTHQSMIQSL*IRSELK
Trigger: CTTCAGTTCACTCCTGATTCAGAGACTTTGAATCAT...ACTCTGGTGGGTCTGATACAGGTAGCAATGTAATTTGAAATCAGTTGAATTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
3UTR-3UTR GCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGAGTCGGACTGTCTTGTaGTCCTTGTTCAGAATAAGA +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKSRTVL*SLFRIR
Trigger: TCTTATTCTGAACAAGGAGCACAAGACAGTCCGACT...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACAACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGAACATTCTTCAGACACTaGCTTTTGAAGTTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: TTSRVHCSLCIRFCNYHRTFFRH*LLKFSN
Trigger: ATTGGAAAACTTCAAAAGGCAGTGTCTGAAGAATGT...TCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGACTTAAGGGACTCTGTTaGTTCTTGTTTCTGTCTAAA +
Preference number: 2 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRLKGLC*FLFLSK
Trigger: TTTAGACAGAAACAAGAAGCAACAGAGTCCCTTAAG...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTATTTGTTTTCATGTGCTaGCAAGGGATTTGTATACAA +
Preference number: 2 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVFVFMC*QGICIQ
Trigger: TTGTATACAAATCCCTTGCCAGCACATGAAAACAAA...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CCA 90 bp CAGGGCTCAGAGTTTGAAGTAAAGAGTCATTTCTTAGTTCAGCTTTCAGTTTGTTGTTCTTCTGACAACTaGGCATCATATAGCATTCTC +
Preference number: 2 (lower is better)
Translates to: QGSEFEVKSHFLVQLSVCCSSDN*ASYSIL
Trigger: GAGAATGCTATATGATGCCCAGTTGTCAGAAGAACA...ACAAACTGAAAGCTGAACTAAGAAATGACTCTTTACTTCAAACTCTGAGCCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR CAA 90 bp TTGATTATCTTGACAGAATTTTGCATATTCCTGAACTGCCTCAAGTaGGATTTGACTGACAAGAGCAGCAGCCACTTTTTCTTCAACTAT +
Preference number: 2 (lower is better)
Translates to: LIILTEFCIFLNCLK*DLTDKSSSHFFFNY
Trigger: ATAGTTGAAGAAAAAGTGGCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGCAGTTCAGGAATATGCAAAATTCTGTCAAGATAATCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGTACTTGAGTATCACATaGCTGTACATTTTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKYLSIT*LYIFCP
Trigger: AGGGCAGAAAATGTACAGTCATGTGATACTCAAGTA...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp TCATTCAACATTAGTTGTCTAGAAGCATCCATGCTTGACACTGAAATCTCATCATTGCTTAGTCGTGTTTaGAGTACCAAGAGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: SFNISCLEASMLDTEISSLLSRV*STKSLL
Trigger: CAACAAACTCTTGGTACTTCAAACACGACTAAGCAA...TGATGAGATTTCAGTGTCAAGCATGGATGCTTCTAGACAACTAATGTTGAATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGTTGCTTAGTCGTGTTTaGAGTACCAAGAGTTTGTTG +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKLLSRV*STKSLL
Trigger: CAACAAACTCTTGGTACTTCAAACACGACTAAGCAA...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGCACACAGCATGTGCTTaGTTTGATGATGCAGTATTT +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKHTACA*FDDAVF
Trigger: AAATACTGCATCATCAAAGCAAGCACATGCTGTGTG...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp CTTTTCTGCACCTTGATTCAGTCCAAAGCCATCTCTGTTAATATTGATGGAAACTTCCAATTTAGTTTGTaGAAGCTCACTCTTCAGTTC +
Preference number: 2 (lower is better)
Translates to: LFCTLIQSKAISVNIDGNFQFSL*KLTLQF
Trigger: GAACTGAAGAGTGAGCTTGCACAAACTAAATTGGAA...GTTTCCATCAATATTAACAGAGATGGCTTTGGACTGAATCAAGGTGCAGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGTTTGTTTTCATGTGCTaGCAAGGGATTTGTATACAA +
Preference number: 2 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMFVFMC*QGICIQ
Trigger: TTGTATACAAATCCCTTGCCAGCACATGAAAACAAA...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CCA 90 bp AAAACATGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACTTTGTTTTCATGTGCTaGCAAGGGATTTGTATACAA +
Preference number: 2 (lower is better)
Translates to: KTCNFSSLIRKVQDTSSYFVFMC*QGICIQ
Trigger: TTGTATACAAATCCCTTGCCAGCACATGAAAACAAA...GTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACATGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR CAA 90 bp GATGTTTTAAACTGTCTGCTTCTTCTGAGAGGGAATGAGCATTCATaGATGTCTTCTGTCCAATATTTGCCAATTCCTGTTGAAGTTTTT +
Preference number: 2 (lower is better)
Translates to: DVLNCLLLLRGNEHS*MSSVQYLPIPVEVF
Trigger: AAAAACTTCAACAGGAATTGGCAAATATTGGACAGAAGACATCAATGAATGCTCATTCCCTCTCAGAAGAAGCAGACAGTTTAAAACATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR TCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGAATCATCTTTTACTTTaGGAAGGCAAGCATACTCCT +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKNHLLL*EGKHTP
Trigger: AGGAGTATGCTTGCCTTCTCAAAGTAAAAGATGATT...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp TCATTCAACATTAGTTGTCTAGAAGCATCCATGCTTGACACTGAAATCTCATCAAAATTAGCAGTGAGCTaGGTTATAATGCCATCTCTT +
Preference number: 2 (lower is better)
Translates to: SFNISCLEASMLDTEISSKLAVS*VIMPSL
Trigger: AAGAGATGGCATTATAACCCAGCTCACTGCTAATTT...TGATGAGATTTCAGTGTCAAGCATGGATGCTTCTAGACAACTAATGTTGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTTGCTTTTCCAATGCTTaGTTTTGCTGTCTTAAATCC +
Preference number: 2 (lower is better)
Translates to: IYSHVNTILWYALNLFHTCFSNA*FCCLKS
Trigger: GGATTTAAGACAGCAAAACCAAGCATTGGAAAAGCA...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGTCCAATGCTTGGTTTTaGTGTCTTAAATCCATTAGT +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKSNAWF*CLKSIS
Trigger: ACTAATGGATTTAAGACAGCAAAACCAAGCATTGGA...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTTCTCTGTCAATGGCTTaGTCATCTAAAAATTTTCTC +
Preference number: 2 (lower is better)
Translates to: IYSHVNTILWYALNLFHTSLSMA*SSKNFL
Trigger: GAGAAAATTTTTAGATGAGCAAGCCATTGACAGAGA...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGGTAATTTTAAGTTGCTaGTGGAGTTTCGTAACTTGT +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKVILSC*WSFVTC
Trigger: ACAAGTTACGAAACTCCAGCAGCAACTTAAAATTAC...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR GCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGGTTGTAATTTTAAGTTaGTGCTGGAGTTTCGTAACT +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKVVILS*CWSFVT
Trigger: AGTTACGAAACTCCAGCAGCAACTTAAAATTACAAC...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGTCTTCAACTTCTCCTTaGTTTTCATTTCCATTCTGT +
Preference number: 2 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKSSTSP*FSFPFC
Trigger: ACAGAATGGAAATGAAAACCAAGGAGAAGTTGAAGA...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CCA 90 bp GCTGTGTTCATATTGGTCCCATTGAATATTCACAATACAAAAGCACAAAAGAACTTTGTTTTCATGTGCTaGCAAGGGATTTGTATACAA +
Preference number: 2 (lower is better)
Translates to: AVFILVPLNIHNTKAQKNFVFMC*QGICIQ
Trigger: TTGTATACAAATCCCTTGCCAGCACATGAAAACAAA...GTTCTTTTGTGCTTTTGTATTGTGAATATTCAATGGGACCAATATGAACACAGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 18 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR GCA 72 bp AGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCAATTCCCGCTCCCTAT +
Preference number: 3 (lower is better)
Translates to: RARVAETVQYHH*SAAVRAIPAPY
Trigger: ATAGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR CCA 72 bp CGGGCAAGCAGGGCCAAGGTGGCATCTTCACATTCCTaGAACCCACCCAGTAACAGCAGCAGGTATTTCTTC +
Preference number: 3 (lower is better)
Translates to: RASRAKVASSHS*NPPSNSSRYFF
Trigger: GAAGAAATACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTTCACTGCGTCCCAACTaGGCTTTCTCTTTCTCCAAA +
Preference number: 3 (lower is better)
Translates to: LTADRNLVKPFGRLVITSSLRPN*AFSFSK
Trigger: TTTGGAGAAAGAGAAAGCCAAGTTGGGACGCAGTGA...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCAATCAACAGGTAAGCTaGGCGGAACCGTGGACTCAC +
Preference number: 3 (lower is better)
Translates to: LLMKALSKFLLALKGLCCNQQVS*AEPWTH
Trigger: GTGAGTCCACGGTTCCGCCAAGCTTACCTGTTGATT...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR GCA 72 bp TTCAAAGAAAGGGGAGCTGTGGGTCTCGCACTGTGGTaGTGCCAAGATGTGGTTAAACTCAGAGCACCTGAC +
Preference number: 3 (lower is better)
Translates to: FKERGAVGLALW*CQDVVKLRAPD
Trigger: GTCAGGTGCTCTGAGTTTAACCACATCTTGGCAGCACCACAGTGCGAGACCCACAGCTCCCCTTTCTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679457.1
3UTR-3UTR CAA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTGTTTGCGTACTGCTGTaGCGCAGCTCACAACACAGC +
Preference number: 3 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVVCVLL*RSSQHS
Trigger: GCTGTGTTGTGAGCTGCGCAACAGCAGTACGCAAAC...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTTCGCTGTCTCTCCATTaGCCGCATATGTGCTTGCCT +
Preference number: 3 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVSLSLH*PHMCLP
Trigger: AGGCAAGCACATATGCGGCAAATGGAGAGACAGCGA...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TACTCTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACTGTTTATGCTGTGCCTaGAGTGTTGTTTCTAGTTCC +
Preference number: 3 (lower is better)
Translates to: YSDGRPKPGEALWAIGDHCLCCA*SVVSSS
Trigger: GGAACTAGAAACAACACTCAAGGCACAGCATAAACA...GTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR TCA 72 bp GCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTaGGCTCCACTTGCATCTCCAGCATTTGAGACTGCT +
Preference number: 3 (lower is better)
Translates to: APAVPLLCLSYC*APLASPAFETA
Trigger: AGCAGTCTCAAATGCTGGAGATGCAAGTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp GAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCACCAGAAGAATTCTGTCCCTCAGTGTaGGCCTCCTGTTCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: ERYVVCLGSPYNSSPPEEFCPSV*ASCSVC
Trigger: GCAGACAGAACAGGAGGCCAACACTGAGGGACAGAA...TTCTTCTGGTGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp GAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCACCAGAAGAAAGCCACAAGAAGTACTaGGGGACACCAAGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: ERYVVCLGSPYNSSPPEESHKKY*GTPSWA
Trigger: AGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCT...TTCTTCTGGTGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR GCA 72 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTaGCGCATATGTGCTTGCCTTAACAATTCCGTTGCC +
Preference number: 3 (lower is better)
Translates to: CSCSWSSRCLSI*RICACLNNSVA
Trigger: GGCAACGGAATTGTTAAGGCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTAGGACATGGCGACCAATaGTTTCTTCAACAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLGHGDQ*FLQQLL
Trigger: CAGCAGCTGTTGAAGAAACAATTGGTCGCCATGTCC...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTGGCCAGTTAATTTCTGTAGTTTGCATCTCCAGCATTaGAGACTGCTTCTGCTGTAT +
Preference number: 3 (lower is better)
Translates to: LGDTKLGSSPCWPVNFCSLHLQH*RLLLLY
Trigger: ATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCAA...ACTACAGAAATTAACTGGCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp AGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCCACTTGCTGTTTATGCTGTGCCTaGAGTGTTGTTTCTAGTTCC +
Preference number: 3 (lower is better)
Translates to: SCSCSSVALSFILLSSTCCLCCA*SVVSSS
Trigger: GGAACTAGAAACAACACTCAAGGCACAGCATAAACA...GCAAGTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp CAAGCAGGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCACCTATCTTTTTCCATTaGCTGTCGTGTTTGCAAAGA +
Preference number: 3 (lower is better)
Translates to: QAGPRWHLHIPGTHPVTAPIFFH*LSCLQR
Trigger: TCTTTGCAAACACGACAGCAAATGGAAAAAGATAGG...TGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR GCA 72 bp TCACAACACAGCTTCTCTCTTCCAGCTAAAGACAGCTaGTTTAGTGCTTCCAGCTCCTCTAAAAGCACCCTC +
Preference number: 3 (lower is better)
Translates to: SQHSFSLPAKDS*FSASSSSKSTL
Trigger: GAGGGTGCTTTTAGAGGAGCTGGAAGCACTAAAGCAGCTGTCTTTAGCTGGAAGAGAGAAGCTGTGTTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR GCA 72 bp CATTTTCTCAGAACTCAGCTGCTCCTGCAGTTCCGTTaGTCTGTCTTTCATACTGCTGAGCTCCACTTGCAT +
Preference number: 3 (lower is better)
Translates to: HFLRTQLLLQFR*SVFHTAELHLH
Trigger: ATGCAAGTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTCTGAGAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATAATCAACAGGTAAGCTaGGCGGAACCGTGGACTCAC +
Preference number: 3 (lower is better)
Translates to: CLDSNSLSSWICCCSASNNQQVS*AEPWTH
Trigger: GTGAGTCCACGGTTCCGCCAAGCTTACCTGTTGATT...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCAACTTCCAGGGTACATaGTTCTCTGTGCATCAGATT +
Preference number: 3 (lower is better)
Translates to: LMKALSKFLLALKGLCCFNFQGT*FSVHQI
Trigger: AATCTGATGCACAGAGAACAATGTACCCTGGAAGTT...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCTGCCTGTTGATGTTCTaGGTATTGTCGTACAAGTTC +
Preference number: 3 (lower is better)
Translates to: LMKALSKFLLALKGLCCFCLLMF*VLSYKF
Trigger: GAACTTGTACGACAATACCAAGAACATCAACAGGCA...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATTCGCTGTCTCTCCATTaGCCGCATATGTGCTTGCCT +
Preference number: 3 (lower is better)
Translates to: CLDSNSLSSWICCCSASNSLSLH*PHMCLP
Trigger: AGGCAAGCACATATGCGGCAAATGGAGAGACAGCGA...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCGGACATGGCGACCAATaGTTTCTTCAACAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTGHGDQ*FLQQLL
Trigger: CAGCAGCTGTTGAAGAAACAATTGGTCGCCATGTCC...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCTGGCAAGGGATTaGTATACAATCATAAGCTGT +
Preference number: 3 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIVLARD*YTIISC
Trigger: ACAGCTTATGATTGTATACAAATCCCTTGCCAGCAC...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCAAAATAATGTTGTTCTaGCTGACACACAGCATGTGC +
Preference number: 3 (lower is better)
Translates to: LMKALSKFLLALKGLCCFKIMLF*LTHSMC
Trigger: GCACATGCTGTGTGTCAGCAAGAACAACATTATTTT...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCTTGATGTTCTTGGTATaGTCGTACAAGTTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: LMKALSKFLLALKGLCCFLMFLV*SYKFLS
Trigger: AGACAGGAACTTGTACGACAATACCAAGAACATCAA...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCCTCTGCCTCCAATTCTaGCAACCTGTTACTTGCACA +
Preference number: 3 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTLCLQF*QPVTCT
Trigger: TGTGCAAGTAACAGGTTGCAAGAATTGGAGGCAGAG...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TTTGTGCAAGCTCACTCTTCAGTTCAGCAACCACCATTTTCTCAGAACTCAGCTACTGCTGAGCTCCACTaGCATCTCCAGCATTTGAGA +
Preference number: 3 (lower is better)
Translates to: FVQAHSSVQQPPFSQNSATAELH*HLQHLR
Trigger: TCTCAAATGCTGGAGATGCAAGTGGAGCTCAGCAGT...AGCTGAGTTCTGAGAAAATGGTGGTTGCTGAACTGAAGAGTGAGCTTGCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp GAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCACCAGAAGAATCACTGCGTCCCAACTaGGCTTTCTCTTTCTCCAAA +
Preference number: 3 (lower is better)
Translates to: ERYVVCLGSPYNSSPPEESLRPN*AFSFSK
Trigger: TTTGGAGAAAGAGAAAGCCAAGTTGGGACGCAGTGA...TTCTTCTGGTGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR GCA 72 bp TTCAGTTCAGCAACCACCATTTTCTCAGAACTCAGCTaGTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTG +
Preference number: 3 (lower is better)
Translates to: FSSATTIFSELS*SCSSVALSFIL
Trigger: CAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTCTGAGAAAATGGTGGTTGCTGAACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR GCA 72 bp TTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTaGTCATTGTGCATTTTGTGTCATCAGTCCGCTGAA +
Preference number: 3 (lower is better)
Translates to: LGSVDSEYLAHW*SLCILCHQSAE
Trigger: TTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
3UTR GCA 72 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTaGACACTGGTGCTCATTGTGCATTTTGTGTCATCA +
Preference number: 3 (lower is better)
Translates to: RSPVRLCRLRVP*TLVLIVHFVSS
Trigger: TGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
3UTR CCA 72 bp AATGAGTGTGAAAGAATTTCAAAGAAAGGGGAGCTGTaGGTCTCGCACTGTGGTGCTGCCAAGATGTGGTTA +
Preference number: 3 (lower is better)
Translates to: NECERISKKGEL*VSHCGAAKMWL
Trigger: TAACCACATCTTGGCAGCACCACAGTGCGAGACCCACAGCTCCCCTTTCTTTGAAATTCTTTCACACTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679457.1
3UTR CCA 72 bp GAGAGTTCAGTACTATCTGTGGTTTCAGGTCTCCACTaGGGGTGTTGGACTATACTCTTGATATGGTTTGGC +
Preference number: 3 (lower is better)
Translates to: ESSVLSVVSGLH*GCWTILLIWFG
Trigger: GCCAAACCATATCAAGAGTATAGTCCAACACCCCCAGTGGAGACCTGAAACCACAGATAGTACTGAACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR-3UTR CAA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATATGAGTCGGACTGTCTaGTGCTCCTTGTTCAGAATA +
Preference number: 3 (lower is better)
Translates to: THKKRLLQFSYSELQFLYMSRTV*CSLFRI
Trigger: TATTCTGAACAAGGAGCACAAGACAGTCCGACTCAT...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTCCTGATCCACATGAGTaGAATAAACCAGAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: ASRSACNCTSRDNSGLASPDPHE*NKPERG
Trigger: GCCTCTCTCTGGTTTATTCAACTCATGTGGATCAGG...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCCCTGATCCACATGAGTaGAATAAACCAGAGAGAGGC +
Preference number: 3 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHIPDPHE*NKPERG
Trigger: GCCTCTCTCTGGTTTATTCAACTCATGTGGATCAGG...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCTCAGCACACAGTCCTTaGATTCTGGTATATCATGGG +
Preference number: 3 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTSAHSP*ILVYHG
Trigger: CCCATGATATACCAGAATCAAAGGACTGTGTGCTGA...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTCTTCAACAGCTGCTGTaGTCTTTACAACTTCTAAGA +
Preference number: 3 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVLQQLL*SLQLLR
Trigger: TCTTAGAAGTTGTAAAGACAACAGCAGCTGTTGAAG...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGGCTCCTGCAGTTCCGTaGCTCTGTCTTTCATACTGC +
Preference number: 3 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMAPAVP*LCLSYC
Trigger: GCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGC...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp AAGAGTCATTTCTTAGTTCAGCTTTCAGTTTGTATACTTCAGCCTCTGCCCTTTTTCTGTCCCTCAGTGTaGGCCTCCTGTTCTGTCTGC +
Preference number: 3 (lower is better)
Translates to: KSHFLVQLSVCILQPLPFFCPSV*ASCSVC
Trigger: GCAGACAGAACAGGAGGCCAACACTGAGGGACAGAA...AAAGGGCAGAGGCTGAAGTATACAAACTGAAAGCTGAACTAAGAAATGACTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp TTTCAGTCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: FQSMSHKKYLGTPSWALHYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...GTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATATGAGTCGGACTGTCTaGTGCTCCTTGTTCAGAATA +
Preference number: 3 (lower is better)
Translates to: CLDSNSLSSWICCCSASNMSRTV*CSLFRI
Trigger: TATTCTGAACAAGGAGCACAAGACAGTCCGACTCAT...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCTCCCACACAGAGTCTTaGGATTTGGACTTAATGGAG +
Preference number: 3 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHISHTES*DLDLME
Trigger: CTCCATTAAGTCCAAATCCAAAGACTCTGTGTGGGA...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATCAATTCCGTTGCCTGTaGATGTTCTTGGTATTGTCG +
Preference number: 3 (lower is better)
Translates to: CLDSNSLSSWICCCSASNQFRCL*MFLVLS
Trigger: CGACAATACCAAGAACATCAACAGGCAACGGAATTG...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCCTTGCAACCTGTTACTaGCACATAACAACTCCTGCT +
Preference number: 3 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHILATCY*HITTPA
Trigger: AGCAGGAGTTGTTATGTGCAAGTAACAGGTTGCAAG...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp CGCATATGTGCTTGCCTTAACAATTCCGTTGCCTGTTaGTGTTCTTGGTATTGTCGTACAAGTTCCTGTCTC +
Preference number: 3 (lower is better)
Translates to: RICACLNNSVAC*CSWYCRTSSCL
Trigger: GAGACAGGAACTTGTACGACAATACCAAGAACATCAACAGGCAACGGAATTGTTAAGGCAAGCACATATGCG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp CTTCTCGTTCTAGTTCTTGCTTCTGGAATTCCTGCATaGTTCCTTGTAGTCGCTGTCCTTCAAGGTCTAACT +
Preference number: 3 (lower is better)
Translates to: LLVLVLASGIPA*FLVVAVLQGLT
Trigger: AGTTAGACCTTGAAGGACAGCGACTACAAGGAATCATGCAGGAATTCCAGAAGCAAGAACTAGAACGAGAAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR CCA 72 bp TCTGCTTCTGACCTCCAAATTAGGCTGGCAGATGACTaGCTTTTACTAGATCTATCTAGAATCCCAAGGACA +
Preference number: 3 (lower is better)
Translates to: SASDLQIRLADD*LLLDLSRIPRT
Trigger: TGTCCTTGGGATTCTAGATAGATCTAGTAAAAGCCAGTCATCTGCCAGCCTAATTTGGAGGTCAGAAGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTGTGCTGGCAAGGGATTaGTATACAATCATAAGCTGT +
Preference number: 3 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSVLARD*YTIISC
Trigger: ACAGCTTATGATTGTATACAAATCCCTTGCCAGCAC...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp CTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: LSAMRYLGIRSPVRLCRLYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...GAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATACTGTCTTGTGCTCCTaGTTCAGAATAAGAATCATC +
Preference number: 3 (lower is better)
Translates to: THKKRLLQFSYSELQFLYTVLCS*FRIRII
Trigger: GATGATTCTTATTCTGAACAAGGAGCACAAGACAGT...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ACAACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGAGTGAGGATCTGTTGTTaGGCTTGTAGTAAGTCTGCA +
Preference number: 3 (lower is better)
Translates to: TTSRVHCSLCIRFCNYHRVRICC*ACSKSA
Trigger: TGCAGACTTACTACAAGCCAAACAACAGATCCTCAC...TCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp AGAGGCAAATGCGTTGGGCTTCCATCTGTAGCCTTAAATCATTCTGTTCTGATTTTCTTCAAGCTGCTGTaGATGAGTGAGGATCTGTTG +
Preference number: 3 (lower is better)
Translates to: RGKCVGLPSVALNHSVLIFFKLL*MSEDLL
Trigger: CAACAGATCCTCACTCATCAACAGCAGCTTGAAGAA...AATCAGAACAGAATGATTTAAGGCTACAGATGGAAGCCCAACGCATTTGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TCTCCAAATTCAAGTTTCATACCATCTGTCTGCTGTCCCCAGATCTTGCTTAGTTCCCACACAGAGTCTTaGGATTTGGACTTAATGGAG +
Preference number: 3 (lower is better)
Translates to: SPNSSFIPSVCCPQILLSSHTES*DLDLME
Trigger: CTCCATTAAGTCCAAATCCAAAGACTCTGTGTGGGA...ACTAAGCAAGATCTGGGGACAGCAGACAGATGGTATGAAACTTGAATTTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTTTCAGACACTGCCTTTaGAAGTTTTCCAATGAGCAG +
Preference number: 3 (lower is better)
Translates to: ASRSACNCTSRDNSGLASFRHCL*KFSNEQ
Trigger: CTGCTCATTGGAAAACTTCAAAAGGCAGTGTCTGAA...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTATCTAGACAGTTCAGTTaGTTGAGCAAATGCTATACT +
Preference number: 3 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLSRQFS*LSKCYT
Trigger: AGTATAGCATTTGCTCAACAAACTGAACTGTCTAGA...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCAAAATAATGTTGTTCTaGCTGACACACAGCATGTGC +
Preference number: 3 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTKIMLF*LTHSMC
Trigger: GCACATGCTGTGTGTCAGCAAGAACAACATTATTTT...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTTTCAACCTCTCTAGTTaGATGTTCACTGATAGGCTG +
Preference number: 3 (lower is better)
Translates to: ASRSACNCTSRDNSGLASFNLSS*MFTDRL
Trigger: CAGCCTATCAGTGAACATCAAACTAGAGAGGTTGAA...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp ATAAGTGGTCTTGTTCTTCAAGCTGCTGTTGATGAGTaGGGATCTGTTGTTTGGCTTGTAGTAAGTCTGCAG +
Preference number: 3 (lower is better)
Translates to: ISGLVLQAAVDE*GSVVWLVVSLQ
Trigger: CTGCAGACTTACTACAAGCCAAACAACAGATCCTCACTCATCAACAGCAGCTTGAAGAACAAGACCACTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR GCA 72 bp TTTTCTTCTCGTTCTAGTTCTTGCTTCTGGAATTCCTaGATGATTCCTTGTAGTCGCTGTCCTTCAAGGTCT +
Preference number: 3 (lower is better)
Translates to: FSSRSSSCFWNS*MIPCSRCPSRS
Trigger: AGACCTTGAAGGACAGCGACTACAAGGAATCATGCAGGAATTCCAGAAGCAAGAACTAGAACGAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAGTGCTGGCAAGGGATTaGTATACAATCATAAGCTGT +
Preference number: 3 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVVLARD*YTIISC
Trigger: ACAGCTTATGATTGTATACAAATCCCTTGCCAGCAC...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp AGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: RLRVPCTLVLIVHFVSSVYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...GACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCCAAAATCAACTGTTCTaGCTTACTTTCTTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTQNQLF*LTFFSN
Trigger: GTTGGAGAAGAAAGTAAGCAAGAACAGTTGATTTTG...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATAGTTTCTTTCAACTGTaGCTGCAAAGAGGATATGAG +
Preference number: 3 (lower is better)
Translates to: CLDSNSLSSWICCCSASNSFFQL*LQRGYE
Trigger: CTCATATCCTCTTTGCAGCAACAGTTGAAAGAAACT...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATCTCTGCCTCATAGTTTaGTTCAGTTTCTTTCAACTG +
Preference number: 3 (lower is better)
Translates to: CLDSNSLSSWICCCSASNLCLIV*FSFFQL
Trigger: CAGTTGAAAGAAACTGAACAAAACTATGAGGCAGAG...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCCAGCATGTGCTTGCTTaGATGATGCAGTATTTTCTT +
Preference number: 3 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHIQHVLA*MMQYFL
Trigger: AAGAAAATACTGCATCATCAAAGCAAGCACATGCTG...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATAGCTTTCACTTGTTTTaGAAGGTCATCACGTACTTT +
Preference number: 3 (lower is better)
Translates to: THKKRLLQFSYSELQFLYSFHLF*KVITYF
Trigger: AAAGTACGTGATGACCTTCAAAAACAAGTGAAAGCT...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp ATTTTCCATATATTCACGAACCTGATCCACATGAGTTaGATAAACCAGAGAGAGGCAAATGCGTTGGGCTTC +
Preference number: 3 (lower is better)
Translates to: IFHIFTNLIHMS*INQREANALGF
Trigger: GAAGCCCAACGCATTTGCCTCTCTCTGGTTTATTCAACTCATGTGGATCAGGTTCGTGAATATATGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp TCTGTCTGCTGTCCCCAGATCTTGCTTAGTCGTGTTTaGAGTACCAAGAGTTTGTTGTATTCTTCTGTTACT +
Preference number: 3 (lower is better)
Translates to: SVCCPQILLSRV*STKSLLYSSVT
Trigger: AGTAACAGAAGAATACAACAAACTCTTGGTACTTCAAACACGACTAAGCAAGATCTGGGGACAGCAGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp TCCAAGGCCAGCTTTTCAGCTATAACCACATCCAATTaGTGTTTTAAACTGTCTGCTTCTTCTGAGAGGGAA +
Preference number: 3 (lower is better)
Translates to: SKASFSAITTSN*CFKLSASSERE
Trigger: TTCCCTCTCAGAAGAAGCAGACAGTTTAAAACATCAATTGGATGTGGTTATAGCTGAAAAGCTGGCCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp TTCATACTGCTGAGCTCCACTTGCATCTCCAGCATTTaGGACTGCTTCTGCTGTATATTATATTCCAAGAGT +
Preference number: 3 (lower is better)
Translates to: FILLSSTCISSI*DCFCCILYSKS
Trigger: ACTCTTGGAATATAATATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCAAGTGGAGCTCAGCAGTATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR TCA 72 bp TCCCGAATTCGAACTTTCTCAGATTCAAGAAGTACCTaGAGCTCTAAGTTTCGACCTTGTTCTTCTGACAAC +
Preference number: 3 (lower is better)
Translates to: SRIRTFSDSRST*SSKFRPCSSDN
Trigger: GTTGTCAGAAGAACAAGGTCGAAACTTAGAGCTTCAGGTACTTCTTGAATCTGAGAAAGTTCGAATTCGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR GCA 72 bp TTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTaGTGTTCCAAGGCCAGCTTTTCAGCTATAACCACA +
Preference number: 3 (lower is better)
Translates to: FMKVISSLAVST*CSKASFSAITT
Trigger: TGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR CCA 72 bp TGCAACCATTTACCTCTGAACTGCAGTCATCTGCTGTaGTTGAAATTTCACTTTCCAGAGAGTTCAGTACTA +
Preference number: 3 (lower is better)
Translates to: CNHLPLNCSHLL*LKFHFPESSVL
Trigger: TAGTACTGAACTCTCTGGAAAGTGAAATTTCAACCACAGCAGATGACTGCAGTTCAGAGGTAAATGGTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679554.1
3UTR-3UTR CAA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGGTGCTGGCAAGGGATTaGTATACAATCATAAGCTGT +
Preference number: 3 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMVLARD*YTIISC
Trigger: ACAGCTTATGATTGTATACAAATCCCTTGCCAGCAC...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp AATATTGATGGAAACAGAACCTGTGACTCGATGCCACCGTCGAACCAAAAATTTGTGCTGGCAAGGGATTaGTATACAATCATAAGCTGT +
Preference number: 3 (lower is better)
Translates to: NIDGNRTCDSMPPSNQKFVLARD*YTIISC
Trigger: ACAGCTTATGATTGTATACAAATCCCTTGCCAGCAC...AAATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTTTCCATCAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp AATTCCCGCTCCCTATCTAGGGTACTACTCATTTCCCGAATTCGAACTTTCTCATATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: NSRSLSRVLLISRIRTFSYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...TGAGAAAGTTCGAATTCGGGAAATGAGTAGTACCCTAGATAGGGAGCGGGAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp AGAGGCAAATGCGTTGGGCTTCCATCTGTAGCCTTAAATCATTCTGTTCTGATTACTGAATACACTGAGTaGCTAAACCATTCAGAGTAC +
Preference number: 3 (lower is better)
Translates to: RGKCVGLPSVALNHSVLITEYTE*LNHSEY
Trigger: GTACTCTGAATGGTTTAGCAACTCAGTGTATTCAGT...AATCAGAACAGAATGATTTAAGGCTACAGATGGAAGCCCAACGCATTTGCCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674381.2
3UTR-3UTR CAA 90 bp ACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGAATCACAGAGTCTTTGGATTaGGACTTAATGGAGTCTAAG +
Preference number: 3 (lower is better)
Translates to: TSRVHCSLCIRFCNYHRITESLD*DLMESK
Trigger: CTTAGACTCCATTAAGTCCAAATCCAAAGACTCTGT...GATTCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TCTCCAAATTCAAGTTTCATACCATCTGTCTGCTGTCCCCAGATCTTGCTTAGTTCTAATTTCTCTCGCTaGGTTACCTCAAGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: SPNSSFIPSVCCPQILLSSNFSR*VTSSFS
Trigger: GGAAAAACTTGAGGTAACCAAGCGAGAGAAATTAGA...ACTAAGCAAGATCTGGGGACAGCAGACAGATGGTATGAAACTTGAATTTGGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp GCATCTCGTTCAGCCTGCAATTGTACTTCTAGGGACAATTCTGGTTTAGCTTCTCAAAATCAACTGTTCTaGCTTACTTTCTTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: ASRSACNCTSRDNSGLASQNQLF*LTFFSN
Trigger: GTTGGAGAAGAAAGTAAGCAAGAACAGTTGATTTTG...AGAAGCTAAACCAGAATTGTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGAAACTTCCAGGGTACATaGTTCTCTGTGCATCAGATT +
Preference number: 3 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRNFQGT*FSVHQI
Trigger: AATCTGATGCACAGAGAACAATGTACCCTGGAAGTT...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTATTTCCATTCTGTGTTaGCGTACTGCTGTTGCGCAG +
Preference number: 3 (lower is better)
Translates to: IYSHVNTILWYALNLFHTISILC*RTAVAQ
Trigger: CTGCGCAACAGCAGTACGCAAACACAGAATGGAAAT...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ATTAGCGGTTTCTACTTGCTGTTCCAAGGCCAGCTTTTCAGCTATAACCACATCTCTTCTGTCCAATATTaGCCAATTCCTGTTGAAGTT +
Preference number: 3 (lower is better)
Translates to: ISGFYLLFQGQLFSYNHISSVQY*PIPVEV
Trigger: AACTTCAACAGGAATTGGCAAATATTGGACAGAAGA...GATGTGGTTATAGCTGAAAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGATTAGCGGTTTCTACTaGCTGTTCCAAGGCCAGCTT +
Preference number: 3 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKISGFY*LFQGQL
Trigger: AAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAAT...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp TTTTCTTCTCGTTCTAGTTCTTGCTTCTGGAATTCCTGCATGATTCCTTGTAGTTTGCATCTCCAGCATTaGAGACTGCTTCTGCTGTAT +
Preference number: 3 (lower is better)
Translates to: FSSRSSSCFWNSCMIPCSLHLQH*RLLLLY
Trigger: ATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCAA...ACTACAAGGAATCATGCAGGAATTCCAGAAGCAAGAACTAGAACGAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSIYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp CAAAAATTTCATTCTGGAAATTGCAATGGATACTCTGACGGCCGACCGAAACCTTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: QKFHSGNCNGYSDGRPKPYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...AGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAATTTCCAGAATGAAATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTATATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp AGAGGCAAATGCGTTGGGCTTCCATCTGTAGCCTTAAATCATTCTGTTCTGATTTCTGAATCTGTTCCCTaGAAAAGCTCAATTCTTCAA +
Preference number: 3 (lower is better)
Translates to: RGKCVGLPSVALNHSVLISESVP*KSSILQ
Trigger: TTGAAGAATTGAGCTTTTCAAGGGAACAGATTCAGA...AATCAGAACAGAATGATTTAAGGCTACAGATGGAAGCCCAACGCATTTGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGGCCTTAACAATTCCGTaGCCTGTTGATGTTCTTGGT +
Preference number: 3 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKALTIP*PVDVLG
Trigger: ACCAAGAACATCAACAGGCAACGGAATTGTTAAGGC...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp AGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGATaGTCTATAGCCACGTTAACACTATTCTCTGGTATG +
Preference number: 3 (lower is better)
Translates to: RTTSSSGLSLLR*SIATLTLFSGM
Trigger: CATACCAGAGAATAGTGTTAACGTGGCTATAGATCATCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp TTGCATATTCCTGAACTGCCTCAAGTTGGATTTGACTaGCAAGAGCAGCAGCCACTTTTTCTTCAACTATTT +
Preference number: 3 (lower is better)
Translates to: LHIPELPQVGFD*QEQQPLFLQLF
Trigger: AAATAGTTGAAGAAAAAGTGGCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGCAGTTCAGGAATATGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR GCA 72 bp TTGATTATCTTGACAGAATTTTGCATATTCCTGAACTaGCTCAAGTTGGATTTGACTGACAAGAGCAGCAGC +
Preference number: 3 (lower is better)
Translates to: LIILTEFCIFLN*LKLDLTDKSSS
Trigger: GCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGCAGTTCAGGAATATGCAAAATTCTGTCAAGATAATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp CCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: PYKKSAGHLELHIQQYCNYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...ATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp AAAACATGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACTATACAAATTCCAGTTaGTTTTCATGTGCTGGCAAG +
Preference number: 3 (lower is better)
Translates to: KTCNFSSLIRKVQDTSSYYTNSS*FSCAGK
Trigger: CTTGCCAGCACATGAAAACAAACTGGAATTTGTATA...GTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACATGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
3UTR-3UTR CAA 90 bp TTAAGAGCATCCTCTGTAAGGACTACTTCTAGTTCAGGTTTGTCTTTGCTCAGATCTTCTGTCCAATATTaGCCAATTCCTGTTGAAGTT +
Preference number: 3 (lower is better)
Translates to: LRASSVRTTSSSGLSLLRSSVQY*PIPVEV
Trigger: AACTTCAACAGGAATTGGCAAATATTGGACAGAAGA...TCTGAGCAAAGACAAACCTGAACTAGAAGTAGTCCTTACAGAGGATGCTCTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp AAGAGTCATTTCTTAGTTCAGCTTTCAGTTTGTATACTTCAGCCTCTGCCCTTTCCTATCTTTTTCCATTaGCTGTCGTGTTTGCAAAGA +
Preference number: 3 (lower is better)
Translates to: KSHFLVQLSVCILQPLPFPIFFH*LSCLQR
Trigger: TCTTTGCAAACACGACAGCAAATGGAAAAAGATAGG...AAAGGGCAGAGGCTGAAGTATACAAACTGAAAGCTGAACTAAGAAATGACTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR TCA 72 bp AACATTCTTCAGACACTGCCTTTTGAAGTTTTCCAATaGGCAGATGTAAAGGCTTTCCTTCATCACCTGTTT +
Preference number: 3 (lower is better)
Translates to: NILQTLPFEVFQ*ADVKAFLHHLF
Trigger: AAACAGGTGATGAAGGAAAGCCTTTACATCTGCTCATTGGAAAACTTCAAAAGGCAGTGTCTGAAGAATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR GCA 72 bp CTGTTAATATTGATGGAAACAGAACCTGTGACTCGATaGCACCGTCGAACCAAAAATTTCATTCTGGAAATT +
Preference number: 3 (lower is better)
Translates to: LLILMETEPVTR*HRRTKNFILEI
Trigger: AATTTCCAGAATGAAATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTTTCCATCAATATTAACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR-3UTR CAA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTACTGTCTTGTGCTCCTaGTTCAGAATAAGAATCATC +
Preference number: 3 (lower is better)
Translates to: IYSHVNTILWYALNLFHTTVLCS*FRIRII
Trigger: GATGATTCTTATTCTGAACAAGGAGCACAAGACAGT...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ATCTATAGCCACGTTAACACTATTCTCTGGTATGCTTTGAATCTTTTCCACACTTCTAATTTCTCTCGCTaGGTTACCTCAAGTTTTTCC +
Preference number: 3 (lower is better)
Translates to: IYSHVNTILWYALNLFHTSNFSR*VTSSFS
Trigger: GGAAAAACTTGAGGTAACCAAGCGAGAGAAATTAGA...AGTGTGGAAAAGATTCAAAGCATACCAGAGAATAGTGTTAACGTGGCTATAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR-3UTR CAA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGTCTAGACAGTTCAGTTaGTTGAGCAAATGCTATACT +
Preference number: 3 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKSRQFS*LSKCYT
Trigger: AGTATAGCATTTGCTCAACAAACTGAACTGTCTAGA...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp GCTCTAAGTGATGATTCCTTTGTTACAGATGGTAAGTaGTCCAAAATCAACTGTTCTTGCTTACTTTCTTCT +
Preference number: 3 (lower is better)
Translates to: ALSDDSFVTDGK*SKINCSCLLSS
Trigger: AGAAGAAAGTAAGCAAGAACAGTTGATTTTGGATCACTTACCATCTGTAACAAAGGAATCATCACTTAGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
3UTR TCA 72 bp GGATTATCTTCTCATGCCAGCATGAAATTGAGTAGTTaGACCTATGAGAGAAAAACAGGAAATTCAACTGAT +
Preference number: 3 (lower is better)
Translates to: GLSSHASMKLSS*TYERKTGNSTD
Trigger: ATCAGTTGAATTTCCTGTTTTTCTCTCATAGGTTCAACTACTCAATTTCATGCTGGCATGAGAAGATAATCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTCTCCTCGTCCTCCATaGCCTCTGCAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATSPRPP*PLQGRQ
Trigger: CTGCCTTCCTTGCAGAGGCCATGGAGGACGAGGAGA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCCTGCCCAGGCTGGAGTaGTGCGGCACGGCCTTACCA +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSLPRLE*CGTALP
Trigger: TGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCAG...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGAGCACTTTGGGAGGCTaGGGTGGGAGGGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVSTLGG*GGREDC
Trigger: GCAGTCCTCCCTCCCACCTCAGCCTCCCAAAGTGCT...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTGTTCCAAGTCGTCTTTaGAGTGCCTCTAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLVPSRL*SASSRV
Trigger: CACTCGGCTAGAGGCACTGCAAAGACGACTTGGAAC...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGGTGGGAGGGAGGACTaGTTAAGGCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PLRARVAETVQYHHCSAAGGRED*LRPGVQ
Trigger: TTGAACTCCTGGCCTTAAGCAGTCCTCCCTCCCACC...AGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR CCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLMKALSKFLLALKGLCCSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679554.1
CDS-3UTR CCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTTGCCTCTGCGAGGTaGTCCCTAACTTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATFASAR*SLTWLK
Trigger: CTTAAGCCAAGTTAGGGATCACCTCGCAGAGGCAAA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTGCTTCTCCTCGGCCTTCTaGTGCTATGTCAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: GKGGRDCPVPSLLCSCACFSSAF*CYVKSL
Trigger: CAGGGATTTGACATAGCATCAGAAGGCCGAGGAGAA...GCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTTTGCGTACTGCTGTTaGGCAGCTCACAACACAGCT +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLFAYCC*AAHNTA
Trigger: AGCTGTGTTGTGAGCTGCGCAACAGCAGTACGCAAA...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCACCCAGGCTGGAGTGCTaGGGCACGGCCTTACCACTT +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPPRLEC*GTALPL
Trigger: AAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGG...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp ACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TADRNLVKPFGRLVITSRLGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...TCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
3UTR CAA 72 bp ACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATaGGTGATCACCTCTAGATCCGTGAAAGCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TADRNLVKPFGR*VITSRSVKAGC
Trigger: GCAGCCAGCTTTCACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTCTGGAATTCCTGCATaGTTCCTTGTAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATSGIPA*FLVVAV
Trigger: GACAGCGACTACAAGGAATCATGCAGGAATTCCAGA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp AGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCCACTTGCCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: SCSCSSVALSFILLSSTCPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...GCAAGTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTCTTGGATCTGCTGTTaGTCTGCCTCCAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLSWICC*SASNSC
Trigger: GCAAGAATTGGAGGCAGAGCAACAGCAGATCCAAGA...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGGCATCTCGTTCAGCCTaGAATTGTACTTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: EGKGGRDCPVPSLLCSCAASRSA*NCTSRD
Trigger: GTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC...CGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTGCATCTCGTTCAGCCTaGAATTGTACTTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLASRSA*NCTSRD
Trigger: GTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp AGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCGTTCCAAGTCGTCTTTaGAGTGCCTCTAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: SRSSEGKGGRDCPVPSLLVPSRL*SASSRV
Trigger: CACTCGGCTAGAGGCACTGCAAAGACGACTTGGAAC...GAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRLGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTGCACTGTCTGCTTCTTCTaGGAGGGAATGAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: GKGGRDCPVPSLLCSCACTVCFF*EGMSIH
Trigger: ATGAATGCTCATTCCCTCTCAGAAGAAGCAGACAGT...GCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTGCCCCATCTGTCTGGGATaGAATGCTCTTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: GKGGRDCPVPSLLCSCACPICLG*NALTQF
Trigger: AAACTGAGTAAGAGCATTGCATCCCAGACAGATGGG...GCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000680365.1
CDS-3UTR GCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTCCCATCTGTCTGGGATaGAATGCTCTTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATPICLG*NALTQF
Trigger: AAACTGAGTAAGAGCATTGCATCCCAGACAGATGGG...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTGCGTGAGAGAAAGCACCTaGATGCCTTCATTATGGACA +
Preference number: 4 (lower is better)
Translates to: GKGGRDCPVPSLLCSCACVREST*MPSLWT
Trigger: TGTCCATAATGAAGGCATGCAGGTGCTTTCTCTCAC...GCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp AGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTTCTCAGAACTCAGCTaGTCCTGCAGTTCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: SRSSEGKGGRDCPVPSLLFSELS*SCSSVA
Trigger: AGCAACGGAACTGCAGGAGCAGCTGAGTTCTGAGAA...GAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp AGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCCACTTGCACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SCSCSSVALSFILLSSTCTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...GCAAGTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTGTACCATCACTGCTCTaGAGCTGTGCGTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGVPSLL*SCACNS
Trigger: GGAATTGCACGCACAGCTGCAGAGCAGTGATGGTAC...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp CAAGCAGGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: QAGPRWHLHIPGTHPVTAVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...TGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp CCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTTCCTCTAGCTGTTTCTaGAGCTCTTTCAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLRARVAETVQYHHCSAASSSCF*SSFSRS
Trigger: GGACCTACTGAAAGAGCTGCAGAAACAGCTAGAGGA...AGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp ACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGAGTTCCAAGTCGTCTTTaGAGTGCCTCTAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: TADRNLVKPFGRLVITSRVPSRL*SASSRV
Trigger: CACTCGGCTAGAGGCACTGCAAAGACGACTTGGAAC...TCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTCCCAGGCTGGAGTGCTaGGGCACGGCCTTACCACTT +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIPRLEC*GTALPL
Trigger: AAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGG...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp AGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCATACTCAAAGCAGCCTaGCTTGAGCTGAGAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SRSSEGKGGRDCPVPSLLILKAA*LELRAL
Trigger: CAAGGCTCTCAGCTCAAGGCAGGCTGCTTTGAGTAT...GAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680365.1
CDS-3UTR CCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTGCATGCCTTCATTATaGACAGCTCTCAGTAATCCC +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATCMPSL*TALSNP
Trigger: GGGATTACTGAGAGCTGTCCATAATGAAGGCATGCA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTGCATCTTCACATTCCTaGAACCCACCCAGTAACAGC +
Preference number: 4 (lower is better)
Translates to: LTADRNLVKPFGRLVITSASSHS*NPPSNS
Trigger: GCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGC...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATCTCCTCGTCCTCCATaGCCTCTGCAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPSPRPP*PLQGRQ
Trigger: CTGCCTTCCTTGCAGAGGCCATGGAGGACGAGGAGA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTCTGTCTAGCTCTCTaGATCTGTTCCCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: PLRARVAETVQYHHCSAAVCLAL*ICSLEK
Trigger: CTTTTCAAGGGAACAGATTCAGAGAGCTAGACAGAC...AGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTCCTCACAAGTCGTTGTaGCAGCTCTGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRPHKSL*QLCSFL
Trigger: GAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGG...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTCTTCTGAGAGGGAATaGGCATTCATTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: EGKGGRDCPVPSLLCSCASSERE*AFIDVF
Trigger: GAAGACATCAATGAATGCTCATTCCCTCTCAGAAGA...CGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTCTTCTGAGAGGGAATaGGCATTCATTGATGTCTTC +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLSSERE*AFIDVF
Trigger: GAAGACATCAATGAATGCTCATTCCCTCTCAGAAGA...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp ACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATGCTTTGGTAGCCACTaGTTCAGCTCTAAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: TADRNLVKPFGRLVITSRCFGSH*FSSKSL
Trigger: GAGGCTCTTAGAGCTGAATCAGTGGCTACCAAAGCA...TCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATCCCTGACCCCAGTCTaGTCCAGAATCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPSLTPV*SRITGA
Trigger: TGCTCCAGTGATTCTGGATCAGACTGGGGTCAGGGA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTCTTTTCTGCACCTTaGTTCAGTCCAAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: PLRARVAETVQYHHCSAAVFSAP*FSPKPS
Trigger: AGATGGCTTTGGACTGAATCAAGGTGCAGAAAAGAC...AGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp CTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCCCTGCCTCAGCCTCCTaGGTAGCTGGGACTATCCAC +
Preference number: 4 (lower is better)
Translates to: LRVPCTLVLIVHFVSSVRPASAS*VAGTIH
Trigger: GTGGATAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...GCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR GCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTCTCGTTCTAGTTCTTaGTTCTGGAATTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATSRSSS*FWNSCM
Trigger: CATGCAGGAATTCCAGAAGCAAGAACTAGAACGAGA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp AGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATCTGCCCAGGCTGGAGTaGTGCGGCACGGCCTTACCA +
Preference number: 4 (lower is better)
Translates to: STLHTGAHCAFCVISPLNLPRLE*CGTALP
Trigger: TGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCAG...ATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCGAAACTGGGCAAGCTTaGCTTTGCCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFETGQA*LCRPPA
Trigger: AGCTGGAGGCCGGCAAAGCCAAGCTTGCCCAGTTTC...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR CCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: CSCSWSSRCLSICRICACAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTCAGCTAGCTGTTCTCTaGCCCTGGACTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRQLAVL*PWTPHE
Trigger: TTCATGAGGAGTCCAGGGCCAGAGAACAGCTAGCTG...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGCATCAGATTCCTTTATaGCAAGTCCCAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EGKGGRDCPVPSLLCSCAHQIPL*QVPVSP
Trigger: TGGAGAAACTGGGACTTGCCATAAAGGAATCTGATG...CGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTCAGTTTTATAGGAAGTaGCTCAAACATGCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATQFYRK*LKHAGL
Trigger: AAGGCCTGCATGTTTGAGCCACTTCCTATAAAACTG...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TCTTGCTTCTGGAATTCCTGCATGATTCCTTGTAGTCGCTGTCCTTCAAGGTCTAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SCFWNSCMIPCSRCPSRSSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...AGACCTTGAAGGACAGCGACTACAAGGAATCATGCAGGAATTCCAGAAGCAAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp AGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: STLHTGAHCAFCVISPLNSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...ATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679554.1
CDS-3UTR CCA 90 bp CTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: LSAMRYLGIRSPVRLCRLRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...GAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAAAGAAAGGGGAGCTGTaGGTCTCGCACTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPKKGEL*VSHCGA
Trigger: AGCACCACAGTGCGAGACCCACAGCTCCCCTTTCTT...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTGAAAGCTCTTCTTCGTaGCTAAATAGAAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATESSSS*LNRSCV
Trigger: AACACAGCTTCTATTTAGTCACGAAGAAGAGCTTTC...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTACTTGAGTATCACATaGCTGTACATTTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EGKGGRDCPVPSLLCSCAYLSIT*LYIFCP
Trigger: AGGGCAGAAAATGTACAGTCATGTGATACTCAAGTA...CGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTACTTGAGTATCACATaGCTGTACATTTTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATYLSIT*LYIFCP
Trigger: AGGGCAGAAAATGTACAGTCATGTGATACTCAAGTA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTAGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CTTGTTTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGACGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: LVSFALSAAHTSHPALPGRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...TCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGCACATGTTGGTCTTaGGTAGACATGGCATCAGAT +
Preference number: 4 (lower is better)
Translates to: LTADRNLVKPFGRLVITSSTCWS*VDMASD
Trigger: ATCTGATGCCATGTCTACTCAAGACCAACATGTGCT...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGCCTCAAGTTGGATTTaGCTGACAAGAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPASSWI*LTRAAA
Trigger: GGCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGC...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CAAGCAGGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCATGCTTTGGTAGCCACTaGTTCAGCTCTAAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: QAGPRWHLHIPGTHPVTACFGSH*FSSKSL
Trigger: GAGGCTCTTAGAGCTGAATCAGTGGCTACCAAAGCA...TGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCTATAGGGAGACTCAGTaGGAGAAAGCACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSYRETQ*EKAPAC
Trigger: GCATGCAGGTGCTTTCTCTCACTGAGTCTCCCTATA...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGTTCACCTCGCCAGTCTaGGAAGCTCTCATGAGATTG +
Preference number: 4 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVFTSPV*EALMRL
Trigger: CAATCTCATGAGAGCTTCTCAGACTGGCGAGGTGAA...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTTCTGACTCTCAAGTaGAAACTTCAGATCCTCAAG +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATFLTLK*KLQILK
Trigger: CTTGAGGATCTGAAGTTTTCACTTGAGAGTCAGAAA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGATTCAAGAAGTACCTaGAGCTCTAAGTTTCGACCT +
Preference number: 4 (lower is better)
Translates to: PLRARVAETVQYHHCSAADSRST*SSKFRP
Trigger: AGGTCGAAACTTAGAGCTTCAGGTACTTCTTGAATC...AGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTTTCCTGAACCCAAATaGAATCTTCATCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLFPEPK*NLHHLL
Trigger: CAGCAGATGATGAAGATTTCATTTGGGTTCAGGAAA...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGACCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTCCTGGGTACCTATTCTaGAATGGTAAAGGGGACCTA +
Preference number: 4 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGPGYLF*NGKGDL
Trigger: TAGGTCCCCTTTACCATTTCAGAATAGGTACCCAGG...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GCAATTCCCGCTCCCTATCTAGGGTACTACTCATTTCCCGAATTCGAACTTTCTAGCACTTTGGGAGGCTaGGGTGGGAGGGAGGACTGC +
Preference number: 4 (lower is better)
Translates to: AIPAPYLGYYSFPEFELSSTLGG*GGREDC
Trigger: GCAGTCCTCCCTCCCACCTCAGCCTCCCAAAGTGCT...AGAAAGTTCGAATTCGGGAAATGAGTAGTACCCTAGATAGGGAGCGGGAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGGGCAAGCTTGGCTTTaGCGGCCTCCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLGQAWL*RPPASS
Trigger: AGAAGAAGCTGGAGGCCGGCAAAGCCAAGCTTGCCC...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTATCCTTCAGCACCCCTaGTTGTCATGGTCACAACTC +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRILQHP*LSWSQL
Trigger: GAGTTGTGACCATGACAAGCAGGGGTGCTGAAGGAT...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTTGCCGCATATGTGCTTaGCTTAACAATTCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGCRICA*LNNSVA
Trigger: GGCAACGGAATTGTTAAGGCAAGCACATATGCGGCA...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR GCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCCGCTGTCTCTCCATTTaGCGCATATGTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSRCLSI*RICACL
Trigger: AAGGCAAGCACATATGCGGCAAATGGAGAGACAGCG...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGTTTGCGTACTGCTGTTaGGCAGCTCACAACACAGCT +
Preference number: 4 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVFAYCC*AAHNTA
Trigger: AGCTGTGTTGTGAGCTGCGCAACAGCAGTACGCAAA...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR GCA 90 bp AGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTTAGCGGTTTCTACTTaGTGTTCCAAGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SRSSEGKGGRDCPVPSLLLAVST*CSKASF
Trigger: AAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAA...GAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTGCACCTCGGCTTCTCTTTaGAGTTGCATCTTTGTAATT +
Preference number: 4 (lower is better)
Translates to: GKGGRDCPVPSLLCSCACTSASL*SCIFVI
Trigger: AATTACAAAGATGCAACTGCAAAGAGAAGCCGAGGT...GCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTTCATTCTGGAAATTaGAATGGATACTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATFHSGN*NGYSDG
Trigger: GCCGTCAGAGTATCCATTGCAATTTCCAGAATGAAA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTGGTGGGAGGGAGGACTaGTTAAGGCCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: SMSHKKYLGTPSWALHLAGGRED*LRPGVQ
Trigger: TTGAACTCCTGGCCTTAAGCAGTCCTCCCTCCCACC...AGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAAGTGATCTTGGCTCACTaGAACCCCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EYLAHWCSLCILCHQSAEVILAH*NPRLLG
Trigger: ACCCAGGAGGCGGGGGTTGCAGTGAGCCAAGATCAC...TTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR GCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTGGAGTGTTACTCTGTTaGCCAGGCTGGAATTCAGTG +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRGVLLC*PGWNSV
Trigger: CACTGAATTCCAGCCTGGGCAACAGAGTAACACTCC...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTTGTAGCTGTTCCTaGTCTTCTCGCTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRSCSCS*SSRCLS
Trigger: GGAGAGACAGCGAGAAGACCAGGAACAGCTACAAGA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTTCTCGAAGTTCCTCTTaGCACTTAAGGGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: LTADRNLVKPFGRLVITSSRSSS*HLRDSV
Trigger: AACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGA...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTGTTCTTCTGACAACTaGGCATCATATAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATCSSDN*ASYSIL
Trigger: GAGAATGCTATATGATGCCCAGTTGTCAGAAGAACA...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCAGGATTGAAATCAGCTaGAGTGCCTGGGTACCTATT +
Preference number: 4 (lower is better)
Translates to: SRSSEGKGGRDCPVPSLLRIEIS*SAWVPI
Trigger: AATAGGTACCCAGGCACTCCAGCTGATTTCAATCCT...GAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TTTGTGCAAGCTCACTCTTCAGTTCAGCAACCACCATTTTCTCAGAACTCAGCTCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: FVQAHSSVQQPPFSQNSALPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...AGCTGAGTTCTGAGAAAATGGTGGTTGCTGAACTGAAGAGTGAGCTTGCACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp TCTGATCTTGAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCACTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SDLERYVVCLGSPYNSSPLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...TGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTCAAGATCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000679457.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SVDSEYLAHWCSLCILCHLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...ATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TACTCTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACGTGAGACCCTTGGCTTaGTTTCTCACTCTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: YSDGRPKPGEALWAIGDHVRPLA*FLTLLF
Trigger: GAACAAGAGAGTGAGAAACCAAGCCAAGGGTCTCAC...GTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAGAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCGCAACCATTTACCTCTaGACTGCAGTCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSATIYL*TAVICC
Trigger: ACAGCAGATGACTGCAGTTCAGAGGTAAATGGTTGC...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTGAATACATTGTTGTTTaGGGTCCTCATTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLEYIVV*GPHFPL
Trigger: TAGAGGAAAATGAGGACCTCAAACAACAATGTATTC...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTCATTTTCACTTGGTTaGGTTGCTCTAAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLSFSLG*VALSDD
Trigger: ATCATCACTTAGAGCAACTCAACCAAGTGAAAATGA...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCCCTCACAAGTCGTTGTaGCAGCTCTGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: CSCSWSSRCLSICRICACPHKSL*QLCSFL
Trigger: GAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGG...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp TACTCTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACAGCACATGTTGGTCTTaGGTAGACATGGCATCAGAT +
Preference number: 4 (lower is better)
Translates to: YSDGRPKPGEALWAIGDHSTCWS*VDMASD
Trigger: ATCTGATGCCATGTCTACTCAAGACCAACATGTGCT...GTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTGCAATTTTGCATATTCCTaGACTGCCTCAAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: GKGGRDCPVPSLLCSCACNFAYS*TASSWI
Trigger: AATCCAACTTGAGGCAGTTCAGGAATATGCAAAATT...GCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp ACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATGCAGTGTTTTCCTGTaGACCTGCCTATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: TADRNLVKPFGRLVITSRCSVFL*TCLSFS
Trigger: GGAAAAAGATAGGCAGGTTCACAGGAAAACACTGCA...TCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTTCTGGAATTCCTGCATaGTTCCTTGTAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCSGIPA*FLVVAV
Trigger: GACAGCGACTACAAGGAATCATGCAGGAATTCCAGA...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTAAATTCTCTTTAAAGTaGCATGTTCAGAATCAGGGC +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATKFSLK*HVQNQG
Trigger: GCCCTGATTCTGAACATGTCACTTTAAAGAGAATTT...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGTTGCAATGGATACTCTaGCGGCCGACCGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVLQWIL*RPTETW
Trigger: CCAGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAA...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp ACTCAGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCCACGTGCCTCTAGCCGAGTaGTATAATCTGTTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TQLLLQFRCSVFHTAELHVPLAE*YNLLGL
Trigger: GAGCCCTAACAGATTATATCACTCGGCTAGAGGCAC...GTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTGTAAGTCTGCAGCTGTaGTACTATGAGTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGVSLQL*YYECCF
Trigger: GAAACAGCACTCATAGTAGCACAGCTGCAGACTTAC...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR GCA 90 bp TGCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTAATTCTTGTTTCATTTaGACTATCTGCTGCCCATAC +
Preference number: 4 (lower is better)
Translates to: CPGWSAAARPYHFLPCATNSCFI*TICCPY
Trigger: GTATGGGCAGCAGATAGTGCAAATGAAACAAGAATT...AGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCATCCTTCAGCACCCCTaGTTGTCATGGTCACAACTC +
Preference number: 4 (lower is better)
Translates to: LLMKALSKFLLALKGLCCILQHP*LSWSQL
Trigger: GAGTTGTGACCATGACAAGCAGGGGTGCTGAAGGAT...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCCCAGAGAGAGGCAAATaGGTTGGGCTTCCATCTGTA +
Preference number: 4 (lower is better)
Translates to: LLMKALSKFLLALKGLCCPERGK*VGLPSV
Trigger: TACAGATGGAAGCCCAACGCATTTGCCTCTCTCTGG...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCCGCTGTCTCTCCATTTaGCGCATATGTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LLMKALSKFLLALKGLCCRCLSI*RICACL
Trigger: AAGGCAAGCACATATGCGGCAAATGGAGAGACAGCG...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp ACTCAGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCCACCCAGCTAAAGACAGCTaGTTTAGTGCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TQLLLQFRCSVFHTAELHPAKDS*FSASSS
Trigger: GGAGCTGGAAGCACTAAAGCAGCTGTCTTTAGCTGG...GTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTCTTAAGGGACTCTGTTaGTTCTTGTTTCTGTCTAAA +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLLKGLC*FLFLSK
Trigger: TTTAGACAGAAACAAGAAGCAACAGAGTCCCTTAAG...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTGATCTGCTGTTGCTCTaGCTCCAATTCTTGCAACCT +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRDLLLL*LQFLQP
Trigger: AGGTTGCAAGAATTGGAGGCAGAGCAACAGCAGATC...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTTGGAAAGGAATCTGTTaGACTTTCACTTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLRARVAETVQYHHCSAAWKGIC*TFTFFS
Trigger: GGAGAAGAAAGTGAAAGTGCAACAGATTCCTTTCCA...AGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTGAGAAAGCACCTGCATaGCTTCATTATGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCEKAPA*LHYGQL
Trigger: GAGCTGTCCATAATGAAGGCATGCAGGTGCTTTCTC...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTTCCAATTTAGTTTGTaGAAGCTCACTCTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLFQFSL*KLTLQF
Trigger: GAACTGAAGAGTGAGCTTGCACAAACTAAATTGGAA...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTCTGGGCTCTTCACCTTaGTGGCCAGTTAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRLGSSP*WPVNFC
Trigger: ACAGAAATTAACTGGCCAGCAAGGTGAAGAGCCCAG...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCCTGGGCTCTTCACCTTaGTGGCCAGTTAATTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSLGSSP*WPVNFC
Trigger: ACAGAAATTAACTGGCCAGCAAGGTGAAGAGCCCAG...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGACTCAGAGTACCTTaGACACTGGTGCTCATTGTG +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSRLRVP*TLVLIV
Trigger: CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCT...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATGAACATAGTCCCAGGCTGGAGTGCTaGGGCACGGCCTTACCACTT +
Preference number: 4 (lower is better)
Translates to: HTGAHCAFCVISPLNEHSPRLEC*GTALPL
Trigger: AAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGG...ACTATGTTCATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATCTTGTAGCTGTTCCTaGTCTTCTCGCTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPSCSCS*SSRCLS
Trigger: GGAGAGACAGCGAGAAGACCAGGAACAGCTACAAGA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTTCTATGGAGGATCTCTaGGCTAATTGTCTATTAAGT +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLSMEDL*ANCLLS
Trigger: ACTTAATAGACAATTAGCCCAGAGATCCTCCATAGA...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTCACTGCGTCCCAACTTaGCTTTCTCTTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRHCVPT*LSLSPK
Trigger: CTTTGGAGAAAGAGAAAGCCAAGTTGGGACGCAGTG...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGCACTGCGTCCCAACTTaGCTTTCTCTTTCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVHCVPT*LSLSPK
Trigger: CTTTGGAGAAAGAGAAAGCCAAGTTGGGACGCAGTG...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATCAGCTGGAGTGCCTaGGTACCTATTCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSISWSA*VPILKW
Trigger: CCATTTCAGAATAGGTACCCAGGCACTCCAGCTGAT...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTACTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSILPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGAAGAAAGGGGAGCTGTaGGTCTCGCACTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLKKGEL*VSHCGA
Trigger: AGCACCACAGTGCGAGACCCACAGCTCCCCTTTCTT...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCACAGGCTGGAATTCAGTaGTGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPQAGIQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCACTGAATTCCAGCCTG...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATCCATCATCTCTAGATaGGTCGGACTGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPSIISR*VGLSCA
Trigger: AGCACAAGACAGTCCGACTCATCTAGAGATGATGGA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCGACTCACTAACAGCTTaGAGCCTCTTCTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSDSLTA*SLFCKQ
Trigger: CTGTTTACAGAAGAGGCTTCAAGCTGTTAGTGAGTC...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTCACCCTCTCTCTCTCTaGAACCAGGTTTTCATTATC +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRHPLSL*NQVFII
Trigger: GATAATGAAAACCTGGTTTCAGAGAGAGAGAGGGTG...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATTCCTCATGGACACATaGCTTTACAGATGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPFLMDT*LYRCLC
Trigger: GCAGAGGCATCTGTAAAGTCATGTGTCCATGAGGAA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: THKKRLLQFSYSELQFLYRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCACTGTCTGCTTCTTCTaGGAGGGAATGAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSTVCFF*EGMSIH
Trigger: ATGAATGCTCATTCCCTCTCAGAAGAAGCAGACAGT...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTTCTCTCTTTAAGCTaGATAATTCCTGTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: PLRARVAETVQYHHCSAAVLSLS*IIPVLA
Trigger: AGCTAACACAGGAATTATTCAGCTTAAAGAGAGAAC...AGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGGCCTCAAGTTGGATTTaGCTGACAAGAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVASSWI*LTRAAA
Trigger: GGCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGC...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGAGTTGTGCCTCAAGTTGGATTTaGCTGACAAGAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FICTICCPYISSSSARSCASSWI*LTRAAA
Trigger: GGCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGC...ACAACTCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCTGCTTTGGTAGCCACTaGTTCAGCTCTAAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFCFGSH*FSSKSL
Trigger: GAGGCTCTTAGAGCTGAATCAGTGGCTACCAAAGCA...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp AAGCTCACTCTTCAGTTCAGCAACCACCATTTTCTCAGAACTCAGCTGCTCCTGTCCCTGACCCCAGTCTaGTCCAGAATCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: KLTLQFSNHHFLRTQLLLSLTPV*SRITGA
Trigger: TGCTCCAGTGATTCTGGATCAGACTGGGGTCAGGGA...CAGGAGCAGCTGAGTTCTGAGAAAATGGTGGTTGCTGAACTGAAGAGTGAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TACTCTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCATTCCATAGCTGCTTaGTATTCAACACCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: YSDGRPKPGEALWAIGDHHSIAA*YSTPCS
Trigger: AGAACAGGGTGTTGAATATCAAGCAGCTATGGAATG...GTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp CAAGCAGGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCATGCATCTCCAGCATTTaGGACTGCTTCTGCTGTATA +
Preference number: 4 (lower is better)
Translates to: QAGPRWHLHIPGTHPVTACISSI*DCFCCI
Trigger: TATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCA...TGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTGCATCTCCAGCATTTaGGACTGCTTCTGCTGTATA +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRCISSI*DCFCCI
Trigger: TATACAGCAGAAGCAGTCTCAAATGCTGGAGATGCA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTTGCAGTGTTTTCCTGTaGACCTGCCTATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCCSVFL*TCLSFS
Trigger: GGAAAAAGATAGGCAGGTTCACAGGAAAACACTGCA...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTTGGAAACAGAACCTGTaGCTCGATGCCACCGTCGAA +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIWKQNL*LDATVE
Trigger: TTCGACGGTGGCATCGAGTCACAGGTTCTGTTTCCA...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATGAACATAGTCCTGCCTCAGCCTCCTaGGTAGCTGGGACTATCCAC +
Preference number: 4 (lower is better)
Translates to: HTGAHCAFCVISPLNEHSPASAS*VAGTIH
Trigger: GTGGATAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...ACTATGTTCATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR GCA 90 bp CAAGCAGGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCACATTTACCTCTGAACTaGAGTCATCTGCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: QAGPRWHLHIPGTHPVTAHLPLN*SHLLWL
Trigger: CAACCACAGCAGATGACTGCAGTTCAGAGGTAAATG...TGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR GCA 90 bp TCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTCGCTGTCTCTCCATTTaGCGCATATGTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SMSHKKYLGTPSWALHLARCLSI*RICACL
Trigger: AAGGCAAGCACATATGCGGCAAATGGAGAGACAGCG...AGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR GCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGATCTGCTGTTGCTCTaGCTCCAATTCTTGCAACCT +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPDLLLL*LQFLQP
Trigger: AGGTTGCAAGAATTGGAGGCAGAGCAACAGCAGATC...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAAACTGGGCCTGCCTCTaGTTTCATAGCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPNWACL*FHSFLL
Trigger: CAAAAGGAAGCTATGAAAGCAGAGGCAGGCCCAGTT...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CAAGCAGGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCACCCATCTGTCTGGGATaGAATGCTCTTACTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QAGPRWHLHIPGTHPVTAPICLG*NALTQF
Trigger: AAACTGAGTAAGAGCATTGCATCCCAGACAGATGGG...TGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000680365.1
CDS-3UTR GCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTGAGGCATTCCATAGCTaGTTGATATTCAACACCCTG +
Preference number: 4 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCEAFHS*LIFNTL
Trigger: CAGGGTGTTGAATATCAAGCAGCTATGGAATGCCTC...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp CTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCGAACTCAGCTGCTCCTaGAGTTCCGTTGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LRVPCTLVLIVHFVSSVRELSCS*SSVALS
Trigger: AGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTC...GCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp AGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: STLHTGAHCAFCVISPLNTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...ATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCGTACCATCACTGCTCTaGAGCTGTGCGTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: LRVPCTLVLIVHFVSSVRVPSLL*SCACNS
Trigger: GGAATTGCACGCACAGCTGCAGAGCAGTGATGGTAC...GCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTGCTTCTGGAATTCCTaGATGATTCCTTGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRCFWNS*MIPCSR
Trigger: GCGACTACAAGGAATCATGCAGGAATTCCAGAAGCA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGTGCTTCTGGAATTCCTaGATGATTCCTTGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVCFWNS*MIPCSR
Trigger: GCGACTACAAGGAATCATGCAGGAATTCCAGAAGCA...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGTTCCAAGTCGTCTTTaGAGTGCCTCTAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLVPSRL*SASSRV
Trigger: CACTCGGCTAGAGGCACTGCAAAGACGACTTGGAAC...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTAAATTAGCAGTGAGCTaGGTTATAATGCCATCTCTT +
Preference number: 4 (lower is better)
Translates to: PLRARVAETVQYHHCSAAKLAVS*VIMPSL
Trigger: AAGAGATGGCATTATAACCCAGCTCACTGCTAATTT...AGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTCACCCCTGCTTGTCATaGTCACAACTCCATCTAATA +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRHPCLS*SQLHLI
Trigger: TATTAGATGGAGTTGTGACCATGACAAGCAGGGGTG...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTGCTCTTCAACTTCTCCTTaGTTTTCATTTCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: GKGGRDCPVPSLLCSCACSSTSP*FSFPFC
Trigger: ACAGAATGGAAATGAAAACCAAGGAGAAGTTGAAGA...GCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCGAAGTTCCTCTTaGCACTTAAGGGACTCTGTT +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRSRSSS*HLRDSV
Trigger: AACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LPLSAMRYLGIRSPVRLCAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...ACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CTTGTTTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGACAGCTAGCTGTTCTCTaGCCCTGGACTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: LVSFALSAAHTSHPALPGQLAVL*PWTPHE
Trigger: TTCATGAGGAGTCCAGGGCCAGAGAACAGCTAGCTG...TCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR CCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTTTTCCTTTCTGTCTATaGCATCTCGTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCFPFCL*HLVQPA
Trigger: TGCAGGCTGAACGAGATGCCATAGACAGAAAGGAAA...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp AGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTATTCCAAGAGTTCTTaGCTTGGTTTCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: SRSSEGKGGRDCPVPSLLYSKSS*LGFSLS
Trigger: AGAGAGTGAGAAACCAAGCCAAGAACTCTTGGAATA...GAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680365.1
CDS-3UTR CCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTTCTGTCCCTCAGTGTTaGCCTCCTGTTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLISVPQC*PPVLSA
Trigger: TGCAGACAGAACAGGAGGCCAACACTGAGGGACAGA...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGAGGAGTGGGATCTGGGTTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SPLNEHSRKSFLGGVGSGLGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...CCCAGATCCCACTCCTCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GCCCAGGCTGGAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTCATTCAATGAAAACCTaGAAGAATTATCTCTACCAG +
Preference number: 4 (lower is better)
Translates to: AQAGVLRHGLTTFCHALLHSMKT*KNYLYQ
Trigger: CTGGTAGAGATAATTCTTCCAGGTTTTCATTGAATG...AAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp ACTCAGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCCACATCAGCTGGAGTGCCTaGGTACCTATTCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: TQLLLQFRCSVFHTAELHISWSA*VPILKW
Trigger: CCATTTCAGAATAGGTACCCAGGCACTCCAGCTGAT...GTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTAGGATTGAAATCAGCTaGAGTGCCTGGGTACCTATT +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRRIEIS*SAWVPI
Trigger: AATAGGTACCCAGGCACTCCAGCTGATTTCAATCCT...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GGCAAGGGTGGCCGAGACTGTCCAGTACCATCACTGCTCTGCAGCTGTGCGTGCTTTGTTTTCATGTGCTaGCAAGGGATTTGTATACAA +
Preference number: 4 (lower is better)
Translates to: GKGGRDCPVPSLLCSCACFVFMC*QGICIQ
Trigger: TTGTATACAAATCCCTTGCCAGCACATGAAAACAAA...GCACGCACAGCTGCAGAGCAGTGATGGTACTGGACAGTCTCGGCCACCCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp CCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PYKKSAGHLELHIQQYCNSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...ATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTACGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGAAGGAAAGGTCGATTTaGACGGAGGTGGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLKERSI*TEVGRQ
Trigger: TTGCCGTCCCACCTCCGTCCAAATCGACCTTTCCTT...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATTCTCCTCGTCCTCCATaGCCTCTGCAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: STLHTGAHCAFCVISPLNSPRPP*PLQGRQ
Trigger: CTGCCTTCCTTGCAGAGGCCATGGAGGACGAGGAGA...ATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
3UTR CAA 72 bp TCAGTAGTCTTTCAGTCAATGAGCCACAAGAAGTACTaGGGGACACCAAGCTGGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SVVFQSMSHKKY*GTPSWALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGACTGAAAGACTACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCGCAACCATTTACCTCTaGACTGCAGTCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFATIYL*TAVICC
Trigger: ACAGCAGATGACTGCAGTTCAGAGGTAAATGGTTGC...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679554.1
CDS-3UTR TCA 90 bp CTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTGGCCAGTTAATTTCTGTAGTTCCATCATCTCTAGATaGGTCGGACTGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGDTKLGSSPCWPVNFCSSIISR*VGLSCA
Trigger: AGCACAAGACAGTCCGACTCATCTAGAGATGATGGA...ACTACAGAAATTAACTGGCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTGAATACATTGTTGTTTaGGGTCCTCATTTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: LTADRNLVKPFGRLVITSEYIVV*GPHFPL
Trigger: TAGAGGAAAATGAGGACCTCAAACAACAATGTATTC...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATTTACTTTAGAAACTaGTCCTTCAGCACCCCTGCT +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSIYFRN*SFSTPA
Trigger: AGCAGGGGTGCTGAAGGATCAGTTTCTAAAGTAAAT...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCACTGATCCACATGAGTTaGATAAACCAGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPLIHMS*INQREA
Trigger: TGCCTCTCTCTGGTTTATTCAACTCATGTGGATCAG...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAACTGGTGTATTTTCTaGAGTTCCTTGATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LTADRNLVKPFGRLVITSNWCIF*SSLIFS
Trigger: GGAAAAGATCAAGGAACTTCAGAAAATACACCAGTT...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCCAGCACACAGTCCTTTaGTTCTGGTATATCATGGGG +
Preference number: 4 (lower is better)
Translates to: CSCSWSSRCLSICRICACQHTVL*FWYIMG
Trigger: CCCCATGATATACCAGAATCAAAGGACTGTGTGCTG...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTGGAGAACATTTCTTCTaGAATAGTCAGCACACAGTC +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRGEHFF*NSQHTV
Trigger: GACTGTGTGCTGACTATTTCAGAAGAAATGTTCTCC...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTTTCCTCATGGACACATaGCTTTACAGATGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SMSHKKYLGTPSWALHLAFLMDT*LYRCLC
Trigger: GCAGAGGCATCTGTAAAGTCATGTGTCCATGAGGAA...AGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGACCTCACAAGTCGTTGTaGCAGCTCTGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRPHKSL*QLCSFL
Trigger: GAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGG...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp ACAACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGAGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: TTSRVHCSLCIRFCNYHRALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...TCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSIALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGTAAGTGCTTCCTCCTTAACTCCACCCGATTTGCATGCCTTACCACTTTCTTTCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SKCFLLNSTRFACLTTFFRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...AAAGAAAGTGGTAAGGCATGCAAATCGGGTGGAGTTAAGGAGGAAGCACTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCTCTTGTATATCCCTTTaGAGCTGCTCTTTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSSCISL*SCSLES
Trigger: GCTCTCTAAAGAGCAGCTTCAAAGGGATATACAAGA...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCCAAGTTGGATTTGACTaGCAAGAGCAGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: CSCSWSSRCLSICRICACQVGFD*QEQQPL
Trigger: AAGTGGCTGCTGCTCTTGTCAGTCAAATCCAACTTG...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CTTGTTTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGATTTGCCTCTGCGAGGTaGTCCCTAACTTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: LVSFALSAAHTSHPALPGFASAR*SLTWLK
Trigger: CTTAAGCCAAGTTAGGGATCACCTCGCAGAGGCAAA...TCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTTTGCCTCTGCGAGGTaGTCCCTAACTTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: LRVPCTLVLIVHFVSSVRFASAR*SLTWLK
Trigger: CTTAAGCCAAGTTAGGGATCACCTCGCAGAGGCAAA...GCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGAATTTGTGGAGTCTaGTTGCTGCTACTGATCTTC +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSRICGV*LLLLIF
Trigger: GAAGATCAGTAGCAGCAATCAGACTCCACAAATTCT...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTTCCCTGACCCCAGTCTaGTCCAGAATCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: LPLSAMRYLGIRSPVRLCSLTPV*SRITGA
Trigger: TGCTCCAGTGATTCTGGATCAGACTGGGGTCAGGGA...ACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTTCTCCTCGGCCTTCTaGTGCTATGTCAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LRVPCTLVLIVHFVSSVRFSSAF*CYVKSL
Trigger: CAGGGATTTGACATAGCATCAGAAGGCCGAGGAGAA...GCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGTATAGGGAGACTCAGTaGGAGAAAGCACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVYRETQ*EKAPAC
Trigger: GCATGCAGGTGCTTTCTCTCACTGAGTCTCCCTATA...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAAATTCTCTTTAAAGTaGCATGTTCAGAATCAGGGC +
Preference number: 4 (lower is better)
Translates to: LTADRNLVKPFGRLVITSKFSLK*HVQNQG
Trigger: GCCCTGATTCTGAACATGTCACTTTAAAGAGAATTT...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSIPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTCTTTTCTGCACCTTaGTTCAGTCCAAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPVFSAP*FSPKPS
Trigger: AGATGGCTTTGGACTGAATCAAGGTGCAGAAAAGAC...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTGACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGAAGAATGATAAAATaGGTCAGTCTTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LTADRNLVKPFGRLVITSRRMIK*VSLFCT
Trigger: GGTGCAGAAAAGACTGACTCATTTTATCATTCTTCT...AGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGTGCCTCTAGCCGAGTaGTATAATCTGTTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLVPLAE*YNLLGL
Trigger: GAGCCCTAACAGATTATATCACTCGGCTAGAGGCAC...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTAGTCGGACTGTCTTGTaGTCCTTGTTCAGAATAAGA +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRSRTVL*SLFRIR
Trigger: TCTTATTCTGAACAAGGAGCACAAGACAGTCCGACT...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGCTGTCCCCAGATCTTaGTTAGTCGTGTTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPAVPRS*LVVFEV
Trigger: TACTTCAAACACGACTAAGCAAGATCTGGGGACAGC...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTCGCTGTCTCTCCATTTaGCGCATATGTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVRCLSI*RICACL
Trigger: AAGGCAAGCACATATGCGGCAAATGGAGAGACAGCG...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CTTGTTTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGACCAGCTAAAGACAGCTaGTTTAGTGCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVSFALSAAHTSHPALPGPAKDS*FSASSS
Trigger: GGAGCTGGAAGCACTAAAGCAGCTGTCTTTAGCTGG...TCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGTTTGCGTACTGCTGTTaGGCAGCTCACAACACAGCT +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVFAYCC*AAHNTA
Trigger: AGCTGTGTTGTGAGCTGCGCAACAGCAGTACGCAAA...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCTTTCCATTCTGTGTTTaGGTACTGCTGTTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFFPFCV*VLLLRS
Trigger: GCTGCGCAACAGCAGTACGCAAACACAGAATGGAAA...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCGATCTGCTGTTGCTCTaGCTCCAATTCTTGCAACCT +
Preference number: 4 (lower is better)
Translates to: CSCSWSSRCLSICRICACDLLLL*LQFLQP
Trigger: AGGTTGCAAGAATTGGAGGCAGAGCAACAGCAGATC...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCAACTGGGCCTGCCTCTaGTTTCATAGCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFNWACL*FHSFLL
Trigger: CAAAAGGAAGCTATGAAAGCAGAGGCAGGCCCAGTT...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATTTCTCTTTTGCCTCTaGGAGGTGATCCCTAACTTG +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPFLFCL*EVIPNL
Trigger: CAAGTTAGGGATCACCTCGCAGAGGCAAAAGAGAAA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTTCTCTTTTGCCTCTaGGAGGTGATCCCTAACTTG +
Preference number: 4 (lower is better)
Translates to: LLMKALSKFLLALKGLCCFLFCL*EVIPNL
Trigger: CAAGTTAGGGATCACCTCGCAGAGGCAAAAGAGAAA...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCGGACAATTTCTCTTTTaGCTCTGCGAGGTGATCCCT +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFGQFLF*LCEVIP
Trigger: AGGGATCACCTCGCAGAGGCAAAAGAGAAATTGTCC...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGAACTCAGCTGCTCCTaGAGTTCCGTTGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRELSCS*SSVALS
Trigger: AGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTC...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SVDSEYLAHWCSLCILCHTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...ATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATGCTTCTGGAATTCCTaGATGATTCCTTGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPCFWNS*MIPCSR
Trigger: GCGACTACAAGGAATCATGCAGGAATTCCAGAAGCA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTTCTCGTTCTAGTTCTTaGTTCTGGAATTCCTGCATG +
Preference number: 4 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCSRSSS*FWNSCM
Trigger: CATGCAGGAATTCCAGAAGCAAGAACTAGAACGAGA...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGTCTCGCACTGTGGTaGTGCCAAGATGTGGTTAAA +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIGLALW*CQDVVK
Trigger: TTTAACCACATCTTGGCAGCACCACAGTGCGAGACC...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GCATTTTGTGTCATCAGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGACTGCCCAGGCTGGAGTaGTGCGGCACGGCCTTACCA +
Preference number: 4 (lower is better)
Translates to: AFCVISPLNEHSRKSFLGLPRLE*CGTALP
Trigger: TGGTAAGGCCGTGCCGCAGCACTCCAGCCTGGGCAG...TCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACTGATGACACAAAATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TTTTCAGGGTCTATTTCAGTTCCAGCAAAACCACTCCTCACAAGTCGTTGTGACGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: FSGSISVPAKPLLTSRCDAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...GTCACAACGACTTGTGAGGAGTGGTTTTGCTGGAACTGAAATAGACCCTGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR CCA 90 bp TTTGTGCAAGCTCACTCTTCAGTTCAGCAACCACCATTTTCTCAGAACTCAGCTTTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: FVQAHSSVQQPPFSQNSALGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...AGCTGAGTTCTGAGAAAATGGTGGTTGCTGAACTGAAGAGTGAGCTTGCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR CCA 90 bp AGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGAGGAGTGGGATCTGGGGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SPLNEHSRKSFLGGVGSGATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...CCCAGATCCCACTCCTCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCCTGGTGAAGCCCTTTaGGCGATTGGTGATCACCTC +
Preference number: 4 (lower is better)
Translates to: RLRVPCTLVLIVHFVSSVPGEAL*AIGDHL
Trigger: GAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGG...GACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTTAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PVCFHVLARDLYTIISCVSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...AACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp CCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTTCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: PVCFHVLARDLYTIISCVLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...AACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TCCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: SSLFSCAGKGFVYNHKLCLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...ACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AATATTGATGGAAACAGAACCTGTGACTCGATGCCACCGTCGAACCAAAAATTTCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: NIDGNRTCDSMPPSNQKFRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...AAATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTTTCCATCAATATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTTCTCCTCGTCCTCCATaGCCTCTGCAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSSPRPP*PLQGRQ
Trigger: CTGCCTTCCTTGCAGAGGCCATGGAGGACGAGGAGA...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATGTGGGTCTCGCACTGTaGTGCTGCCAAGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: STLHTGAHCAFCVISPLNVGLAL*CCQDVV
Trigger: AACCACATCTTGGCAGCACCACAGTGCGAGACCCAC...ATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCGTGGGTCTCGCACTGTaGTGCTGCCAAGATGTGGTT +
Preference number: 4 (lower is better)
Translates to: RLRVPCTLVLIVHFVSSVVGLAL*CCQDVV
Trigger: AACCACATCTTGGCAGCACCACAGTGCGAGACCCAC...GACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTTGTTTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGATCCATCATCTCTAGATaGGTCGGACTGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LVSFALSAAHTSHPALPGSIISR*VGLSCA
Trigger: AGCACAAGACAGTCCGACTCATCTAGAGATGATGGA...TCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCGCTGCTGTTGATGAGTaGGGATCTGTTGTTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LRVPCTLVLIVHFVSSVRAAVDE*GSVVWL
Trigger: AAGCCAAACAACAGATCCTCACTCATCAACAGCAGC...GCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTTGCTTAGTCGTGTTTaGAGTACCAAGAGTTTGTTG +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRLLSRV*STKSLL
Trigger: CAACAAACTCTTGGTACTTCAAACACGACTAAGCAA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTCAGCACACAGTCCTTTaGTTCTGGTATATCATGGGG +
Preference number: 4 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVQHTVL*FWYIMG
Trigger: CCCCATGATATACCAGAATCAAAGGACTGTGTGCTG...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGCAGCACACAGTCCTTTaGTTCTGGTATATCATGGGG +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLQHTVL*FWYIMG
Trigger: CCCCATGATATACCAGAATCAAAGGACTGTGTGCTG...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTCCTCACAAGTCGTTGTaGCAGCTCTGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLSAMRYLGIRSPVRLCPHKSL*QLCSFL
Trigger: GAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGG...ACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp AAAACATGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: KTCNFSSLIRKVQDTSSYALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...GTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACATGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSIRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTACGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp ACGGCCGACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGACTCTTCACACATTCTTaGTCACTCATCAAACATTCT +
Preference number: 4 (lower is better)
Translates to: TADRNLVKPFGRLVITSRLFTHS*SLIKHS
Trigger: AGAATGTTTGATGAGTGATCAAGAATGTGTGAAGAG...TCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGGCCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCACTGTCTGCTTCTTCTaGGAGGGAATGAGCATTCAT +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFTVCFF*EGMSIH
Trigger: ATGAATGCTCATTCCCTCTCAGAAGAAGCAGACAGT...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTTTGTCTTTGCTCAGATaGTCTATAGCCACGTTAACA +
Preference number: 4 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCLSLLR*SIATLT
Trigger: TGTTAACGTGGCTATAGATCATCTGAGCAAAGACAA...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTAATTTTGCATATTCCTaGACTGCCTCAAGTTGGATT +
Preference number: 4 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGNFAYS*TASSWI
Trigger: AATCCAACTTGAGGCAGTTCAGGAATATGCAAAATT...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATGCTTTGGTAGCCACTaGTTCAGCTCTAAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EYLAHWCSLCILCHQSAECFGSH*FSSKSL
Trigger: GAGGCTCTTAGAGCTGAATCAGTGGCTACCAAAGCA...TTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGATTTGCCTCTGCGAGGTaGTCCCTAACTTGGCTTAAG +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRFASAR*SLTWLK
Trigger: CTTAAGCCAAGTTAGGGATCACCTCGCAGAGGCAAA...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTTCCCTGACCCCAGTCTaGTCCAGAATCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSSLTPV*SRITGA
Trigger: TGCTCCAGTGATTCTGGATCAGACTGGGGTCAGGGA...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CCTGTGACTCGATGCCACCGTCGAACCAAAAATTTCATTCTGGAAATTGCAATGTCCCTGACCCCAGTCTaGTCCAGAATCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: PVTRCHRRTKNFILEIAMSLTPV*SRITGA
Trigger: TGCTCCAGTGATTCTGGATCAGACTGGGGTCAGGGA...CATTGCAATTTCCAGAATGAAATTTTTGGTTCGACGGTGGCATCGAGTCACAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGATTCACCTCGCCAGTCTaGGAAGCTCTCATGAGATTG +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRFTSPV*EALMRL
Trigger: CAATCTCATGAGAGCTTCTCAGACTGGCGAGGTGAA...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTTGTCTTTCATACTGCTaGGCTCCACTTGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLICLSYC*APLASP
Trigger: TGGAGATGCAAGTGGAGCTCAGCAGTATGAAAGACA...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp ACTCAGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATACTGCTGAGCTCCACGATTCAAGAAGTACCTaGAGCTCTAAGTTTCGACCT +
Preference number: 4 (lower is better)
Translates to: TQLLLQFRCSVFHTAELHDSRST*SSKFRP
Trigger: AGGTCGAAACTTAGAGCTTCAGGTACTTCTTGAATC...GTGGAGCTCAGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR TCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTTCTGGAATTCCTGCATaGTTCCTTGTAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLISGIPA*FLVVAV
Trigger: GACAGCGACTACAAGGAATCATGCAGGAATTCCAGA...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCTTTCCTGAACCCAAATaGAATCTTCATCATCTGCTG +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSFPEPK*NLHHLL
Trigger: CAGCAGATGATGAAGATTTCATTTGGGTTCAGGAAA...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: PYKKSAGHLELHIQQYCNPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...ATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AATATTGATGGAAACAGAACCTGTGACTCGATGCCACCGTCGAACCAAAAATTTCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: NIDGNRTCDSMPPSNQKFPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...AAATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTCTGTTTCCATCAATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTTTGCAATGGATACTCTaGCGGCCGACCGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSLQWIL*RPTETW
Trigger: CCAGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAA...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp ACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATGAACATAGTAGGTTGCAATGGATACTCTaGCGGCCGACCGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: TGAHCAFCVISPLNEHSRLQWIL*RPTETW
Trigger: CCAGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAA...CCTACTATGTTCATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTAGAAGAATGATAAAATaGGTCAGTCTTTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGRRMIK*VSLFCT
Trigger: GGTGCAGAAAAGACTGACTCATTTTATCATTCTTCT...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp CACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATGAACATAGTTTGGTCTTGAACTCCTaGCCTAGTGATCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: HTGAHCAFCVISPLNEHSLVLNS*PSDPPA
Trigger: GGCAGGCGGATCACTAGGTCAGGAGTTCAAGACCAA...ACTATGTTCATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR GCA 90 bp ACAACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGAGGGCAAGCTTGGCTTTaGCGGCCTCCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTSRVHCSLCIRFCNYHRGQAWL*RPPASS
Trigger: AGAAGAAGCTGGAGGCCGGCAAAGCCAAGCTTGCCC...TCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCATTTGCACTATCTGCTaGCCATACATCTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFICTIC*PYISSS
Trigger: GCTGGATGAGATGTATGGGCAGCAGATAGTGCAAAT...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGTGCCGCATATGTGCTTaGCTTAACAATTCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVCRICA*LNNSVA
Trigger: GGCAACGGAATTGTTAAGGCAAGCACATATGCGGCA...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGACGCTGTCTCTCCATTTaGCGCATATGTGCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRRCLSI*RICACL
Trigger: AAGGCAAGCACATATGCGGCAAATGGAGAGACAGCG...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTACCAGCTAAAGACAGCTaGTTTAGTGCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLPAKDS*FSASSS
Trigger: GGAGCTGGAAGCACTAAAGCAGCTGTCTTTAGCTGG...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCCCAGCTAAAGACAGCTaGTTTAGTGCTTCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LSAMRYLGIRSPVRLCRLPAKDS*FSASSS
Trigger: GGAGCTGGAAGCACTAAAGCAGCTGTCTTTAGCTGG...GAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCTTTGCGTACTGCTGTTaGGCAGCTCACAACACAGCT +
Preference number: 4 (lower is better)
Translates to: RYLGIRSPVRLCRLRVPCFAYCC*AAHNTA
Trigger: AGCTGTGTTGTGAGCTGCGCAACAGCAGTACGCAAA...GCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTGATCTGCTGTTGCTCTaGCTCCAATTCTTGCAACCT +
Preference number: 4 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVDLLLL*LQFLQP
Trigger: AGGTTGCAAGAATTGGAGGCAGAGCAACAGCAGATC...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CTTGTTTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGATCTTGGATCTGCTGTTaGTCTGCCTCCAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: LVSFALSAAHTSHPALPGSWICC*SASNSC
Trigger: GCAAGAATTGGAGGCAGAGCAACAGCAGATCCAAGA...TCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTAACTGGGCCTGCCTCTaGTTTCATAGCTTCCTTTTG +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLINWACL*FHSFLL
Trigger: CAAAAGGAAGCTATGAAAGCAGAGGCAGGCCCAGTT...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTTGTTCAACTGGGCCTaGCTCTGCTTTCATAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLLFNWA*LCFHSF
Trigger: GAAGCTATGAAAGCAGAGGCAGGCCCAGTTGAACAA...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTCTTAGCGGTTTCTACTTaGTGTTCCAAGGCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LMKALSKFLLALKGLCCFLAVST*CSKASF
Trigger: AAAGCTGGCCTTGGAACAGCAAGTAGAAACCGCTAA...GAAGCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGGACAATTTCTCTTTTaGCTCTGCGAGGTGATCCCT +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLGQFLF*LCEVIP
Trigger: AGGGATCACCTCGCAGAGGCAAAAGAGAAATTGTCC...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGACAATTTCTCTTTTaGCTCTGCGAGGTGATCCCT +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIGQFLF*LCEVIP
Trigger: AGGGATCACCTCGCAGAGGCAAAAGAGAAATTGTCC...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CAAGCAGGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAACCTCGGCTTCTCTTTaGAGTTGCATCTTTGTAATT +
Preference number: 4 (lower is better)
Translates to: QAGPRWHLHIPGTHPVTATSASL*SCIFVI
Trigger: AATTACAAAGATGCAACTGCAAAGAGAAGCCGAGGT...TGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTCTCCTGCAGTTCCGTTaGTCTGTCTTTCATACTGCT +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLILLQFR*SVFHTA
Trigger: AGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAG...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp AGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGAGGAGTGGGATCTGGGGAACTCAGCTGCTCCTaGAGTTCCGTTGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SPLNEHSRKSFLGGVGSGELSCS*SSVALS
Trigger: AGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTC...CCCAGATCCCACTCCTCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCACCAGAAGAAGAACTCAGCTGCTCCTaGAGTTCCGTTGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: ERYVVCLGSPYNSSPPEEELSCS*SSVALS
Trigger: AGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTC...TTCTTCTGGTGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679448.1
ENST00000679457.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGCAGGTTCTTTTAGGTGTTTATaGTGTGCCTTGAGTGTTGTT +
Preference number: 4 (lower is better)
Translates to: GPRWHLHIPGTHPVTAAGSFRCL*CALSVV
Trigger: AACAACACTCAAGGCACAGCATAAACACCTAAAAGA...ACCTGCTGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp CTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTATCCCGTTCTTCACTaGGTCCCAACTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LRVPCTLVLIVHFVSSVRYPVLH*VPTWLS
Trigger: AGAAAGCCAAGTTGGGACGCAGTGAAGAACGGGATA...GCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGTATCCCGTTCTTCACTaGGTCCCAACTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVYPVLH*VPTWLS
Trigger: AGAAAGCCAAGTTGGGACGCAGTGAAGAACGGGATA...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp TCTGATCTTGAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCAGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: SDLERYVVCLGSPYNSSPVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...TGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTCAAGATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679448.1
ENST00000679457.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp TCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTTGCTTCTGGAATTCCTaGATGATTCCTTGTAGTCGC +
Preference number: 4 (lower is better)
Translates to: SMSHKKYLGTPSWALHLACFWNS*MIPCSR
Trigger: GCGACTACAAGGAATCATGCAGGAATTCCAGAAGCA...AGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp CAAGCAGGGCCAAGGTGGCATCTTCACATTCCTGGAACCCACCCAGTAACAGCAGTATACTTCAGCCTCTaGCCTTTTCAAAGATTTCTG +
Preference number: 4 (lower is better)
Translates to: QAGPRWHLHIPGTHPVTAVYFSL*PFQRFL
Trigger: CAGAAATCTTTGAAAAGGGCAGAGGCTGAAGTATAC...TGCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGCCACCTTGGCCCTGCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGTTTCATTCTGGAAATTaGAATGGATACTCTGACGGC +
Preference number: 4 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVFHSGN*NGYSDG
Trigger: GCCGTCAGAGTATCCATTGCAATTTCCAGAATGAAA...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGGCCTTACCACTTTCTaGCATGCGCTACTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLGLTTF*HALLRN
Trigger: ATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCC...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGCCTTACCACTTTCTaGCATGCGCTACTTAGGAAT +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIGLTTF*HALLRN
Trigger: ATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCC...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCGAAACTGGGCAAGCTTaGCTTTGCCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFETGQA*LCRPPA
Trigger: AGCTGGAGGCCGGCAAAGCCAAGCTTGCCCAGTTTC...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000679448.1
ENST00000679521.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTGTCATCAGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGAGGAGTGGAAACTGGGCAAGCTTaGCTTTGCCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CVISPLNEHSRKSFLGGVETGQA*LCRPPA
Trigger: AGCTGGAGGCCGGCAAAGCCAAGCTTGCCCAGTTTC...CACTCCTCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACTGATGACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTGCAGTCATCTGCTGTaGTTGAAATTTCACTTTCCA +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRCSHLL*LKFHFP
Trigger: TGGAAAGTGAAATTTCAACCACAGCAGATGACTGCA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp GCAATTCCCGCTCCCTATCTAGGGTACTACTCATTTCCCGAATTCGAACTTTCTCAGCTAGCTGTTCTCTaGCCCTGGACTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: AIPAPYLGYYSFPEFELSQLAVL*PWTPHE
Trigger: TTCATGAGGAGTCCAGGGCCAGAGAACAGCTAGCTG...AGAAAGTTCGAATTCGGGAAATGAGTAGTACCCTAGATAGGGAGCGGGAATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp AGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGAGGAGTGGGATCTGGGCAGCTAGCTGTTCTCTaGCCCTGGACTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: SPLNEHSRKSFLGGVGSGQLAVL*PWTPHE
Trigger: TTCATGAGGAGTCCAGGGCCAGAGAACAGCTAGCTG...CCCAGATCCCACTCCTCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGAGAGTCCCATCTGTCTaGGATGCAATGCTCTTACTC +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLRVPSV*DAMLLL
Trigger: GAGTAAGAGCATTGCATCCCAGACAGATGGGACTCT...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GACCGAAACCTGGTGAAGCCCTTTGGGCGATTGGTGATCACCTCTAGATCCGTGTGTTCTTCTGACAACTaGGCATCATATAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: DRNLVKPFGRLVITSRSVCSSDN*ASYSIL
Trigger: GAGAATGCTATATGATGCCCAGTTGTCAGAAGAACA...CACGGATCTAGAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp GAGTGCTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTAGTTCTTGCTTCTaGAATTCCTGCATGATTCCT +
Preference number: 4 (lower is better)
Translates to: ECCGTALPLSAMRYLGIRSSSCF*NSCMIP
Trigger: AGGAATCATGCAGGAATTCCAGAAGCAAGAACTAGA...ACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCTTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFLGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTTTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSILGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TCTGATCTTGAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCAGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SDLERYVVCLGSPYNSSPATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...TGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTCAAGATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679448.1
ENST00000679457.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp CTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCGCATCTTCACATTCCTaGAACCCACCCAGTAACAGC +
Preference number: 4 (lower is better)
Translates to: LSAMRYLGIRSPVRLCRLASSHS*NPPSNS
Trigger: GCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGC...GAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTCCTGGTGAAGCCCTTTaGGCGATTGGTGATCACCTC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSPGEAL*AIGDHL
Trigger: GAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGG...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp CACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATGAACATAGTCCTGGTGAAGCCCTTTaGGCGATTGGTGATCACCTC +
Preference number: 4 (lower is better)
Translates to: HTGAHCAFCVISPLNEHSPGEAL*AIGDHL
Trigger: GAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGG...ACTATGTTCATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTTCATCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: VCFHVLARDLYTIISCVHLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...ATGAACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp CCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTTCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: PVCFHVLARDLYTIISCVRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...AACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAAGGAAAGGTCGATTTaGACGGAGGTGGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: LPLSAMRYLGIRSPVRLCKERSI*TEVGRQ
Trigger: TTGCCGTCCCACCTCCGTCCAAATCGACCTTTCCTT...ACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATAAGGAAAGGTCGATTTaGACGGAGGTGGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: THKKRLLQFSYSELQFLYKERSI*TEVGRQ
Trigger: TTGCCGTCCCACCTCCGTCCAAATCGACCTTTCCTT...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679554.1
CDS-3UTR CCA 90 bp TCTCCAAATTCAAGTTTCATACCATCTGTCTGCTGTCCCCAGATCTTGCTTAGTTCTCCTCGTCCTCCATaGCCTCTGCAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SPNSSFIPSVCCPQILLSSPRPP*PLQGRQ
Trigger: CTGCCTTCCTTGCAGAGGCCATGGAGGACGAGGAGA...ACTAAGCAAGATCTGGGGACAGCAGACAGATGGTATGAAACTTGAATTTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR CCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGGTAGGAAATCATTTTTaGGAGGAGTGGGATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVVGNHF*EEWDLG
Trigger: CCCCAGATCCCACTCCTCCCAAAAATGATTTCCTAC...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAAAAAATCACCATGACTaGCTCTATGGCAAGGTAGGT +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPKNHHD*LYGKVG
Trigger: ACCTACCTTGCCATAGAGCCAGTCATGGTGATTTTT...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR CCA 90 bp CGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCCAGGCTGGAATTCAGTaGTGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RYLGIRSPVRLCRLRVPCQAGIQ*CDLGSL
Trigger: CAGTGAGCCAAGATCACACCACTGAATTCCAGCCTG...GCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
3UTR CAA 72 bp AGTTCTTCTTTATCCCGTTCTTCACTGCGTCCCAACTaGGCTTTCTCTTTCTCCAAAGCCCACTGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SSSLSRSSLRPN*AFSFSKAHWSS
Trigger: AGAGCTCCAGTGGGCTTTGGAGAAAGAGAAAGCCAAGTTGGGACGCAGTGAAGAACGGGATAAAGAAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR TCA 90 bp GAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAAGCAACCATTTACCTCTaGACTGCAGTCATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: EYLAHWCSLCILCHQSAEATIYL*TAVICC
Trigger: ACAGCAGATGACTGCAGTTCAGAGGTAAATGGTTGC...TTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCTCCATCATCTCTAGATaGGTCGGACTGTCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RYLGIRSPVRLCRLRVPCSIISR*VGLSCA
Trigger: AGCACAAGACAGTCCGACTCATCTAGAGATGATGGA...GCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGTCTGTCTAGCTCTCTaGATCTGTTCCCTTGAAAAG +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLVCLAL*ICSLEK
Trigger: CTTTTCAAGGGAACAGATTCAGAGAGCTAGACAGAC...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGTTTCTGCAGCTCTTTCAGTAGGTCCTCTGAGGGCAAGGGTGGCCGAGACTGTTCATTTTCACTTGGTTaGGTTGCTCTAAGTGATGAT +
Preference number: 4 (lower is better)
Translates to: CFCSSFSRSSEGKGGRDCSFSLG*VALSDD
Trigger: ATCATCACTTAGAGCAACTCAACCAAGTGAAAATGA...ACAGTCTCGGCCACCCTTGCCCTCAGAGGACCTACTGAAAGAGCTGCAGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCTGATCCACATGAGTTaGATAAACCAGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVLIHMS*INQREA
Trigger: TGCCTCTCTCTGGTTTATTCAACTCATGTGGATCAG...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CTGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAACTGGTGTATTTTCTaGAGTTCCTTGATCTTTTCC +
Preference number: 4 (lower is better)
Translates to: LRHGLTTFCHALLRNTFSNWCIF*SSLIFS
Trigger: GGAAAAGATCAAGGAACTTCAGAAAATACACCAGTT...GGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGCTGCAAAGAGGATATaGGGCTTTCTAATTCTTGAA +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPAAKRI*GFLILE
Trigger: TTCAAGAATTAGAAAGCCTCATATCCTCTTTGCAGC...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTCCTCACAAGTCGTTGTaGCAGCTCTGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSPHKSL*QLCSFL
Trigger: GAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGG...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTTGCCCTGGACTCCTCATaGAGGCGCTCTCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PVCFHVLARDLYTIISCVALDSS*RRSRSS
Trigger: GGAACTTCGAGAGCGCCTTCATGAGGAGTCCAGGGC...AACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AAAACATGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: KTCNFSSLIRKVQDTSSYRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...GTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTTGTCTTTGCTCAGATaGTCTATAGCCACGTTAACA +
Preference number: 4 (lower is better)
Translates to: LLMKALSKFLLALKGLCCLSLLR*SIATLT
Trigger: TGTTAACGTGGCTATAGATCATCTGAGCAAAGACAA...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATTGTCTTTGCTCAGATaGTCTATAGCCACGTTAACA +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPLSLLR*SIATLT
Trigger: TGTTAACGTGGCTATAGATCATCTGAGCAAAGACAA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTGCCTCAAGTTGGATTTaGCTGACAAGAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSASSWI*LTRAAA
Trigger: GGCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGC...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp GAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATCTGATTGCTGCTACTaGTCTTCAGAGTCCCATCTG +
Preference number: 4 (lower is better)
Translates to: EYLAHWCSLCILCHQSAESDCCY*SSESHL
Trigger: CAGATGGGACTCTGAAGATCAGTAGCAGCAATCAGA...TTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCTCCCTGACCCCAGTCTaGTCCAGAATCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFSLTPV*SRITGA
Trigger: TGCTCCAGTGATTCTGGATCAGACTGGGGTCAGGGA...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTTCCCTGACCCCAGTCTaGTCCAGAATCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSISLTPV*SRITGA
Trigger: TGCTCCAGTGATTCTGGATCAGACTGGGGTCAGGGA...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTATCCCTGACCCCAGTCTaGTCCAGAATCACTGGAGCA +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVSLTPV*SRITGA
Trigger: TGCTCCAGTGATTCTGGATCAGACTGGGGTCAGGGA...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CCCGCTCCCTATCTAGGGTACTACTCATTTCCCGAATTCGAACTTTCTCAGATTTTCTCCTCGGCCTTCTaGTGCTATGTCAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: PAPYLGYYSFPEFELSQIFSSAF*CYVKSL
Trigger: CAGGGATTTGACATAGCATCAGAAGGCCGAGGAGAA...AATCTGAGAAAGTTCGAATTCGGGAAATGAGTAGTACCCTAGATAGGGAGCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TCAGATCCTCAAGTTCTTCTTTATCCCGTTCTTCACTGCGTCCCAACTTGGCTTTTCACCTCGCCAGTCTaGGAAGCTCTCATGAGATTG +
Preference number: 4 (lower is better)
Translates to: SDPQVLLYPVLHCVPTWLFTSPV*EALMRL
Trigger: CAATCTCATGAGAGCTTCTCAGACTGGCGAGGTGAA...AAGCCAAGTTGGGACGCAGTGAAGAACGGGATAAAGAAGAACTTGAGGATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR TCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGTGCAGTGTTTTCCTGTaGACCTGCCTATCTTTTTCC +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVCSVFL*TCLSFS
Trigger: GGAAAAAGATAGGCAGGTTCACAGGAAAACACTGCA...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTTCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: PVCFHVLARDLYTIISCVPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...AACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TCCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTCCGACCGAAACCTGGTaGAGCCCTTTGGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: SSLFSCAGKGFVYNHKLCPTETW*SPLGDW
Trigger: CCAATCGCCCAAAGGGCTTCACCAGGTTTCGGTCGG...ACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTATTGCAATGGATACTCTaGCGGCCGACCGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVLQWIL*RPTETW
Trigger: CCAGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAA...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TGTGTCATCAGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGAGGAGTGTTGCAATGGATACTCTaGCGGCCGACCGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: CVISPLNEHSRKSFLGGVLQWIL*RPTETW
Trigger: CCAGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAA...CACTCCTCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACTGATGACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCTTGCAATGGATACTCTaGCGGCCGACCGAAACCTGG +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFLQWIL*RPTETW
Trigger: CCAGGTTTCGGTCGGCCGTCAGAGTATCCATTGCAA...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTTGGAAACAGAACCTGTaGCTCGATGCCACCGTCGAA +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSWKQNL*LDATVE
Trigger: TTCGACGGTGGCATCGAGTCACAGGTTCTGTTTCCA...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp AGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATCGAACTGGTTGGTCTTaGACTCCTGACCTAGTGATC +
Preference number: 4 (lower is better)
Translates to: STLHTGAHCAFCVISPLNRTGWS*TPDLVI
Trigger: GATCACTAGGTCAGGAGTTCAAGACCAACCAGTTCG...ATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TACTACTCATTTCCCGAATTCGAACTTTCTCAGATTCAAGAAGTACCTGAAGCTCAGCCTGCCTTGAGCTaGGAGCCTTGCAAAGCAGGG +
Preference number: 4 (lower is better)
Translates to: YYSFPEFELSQIQEVPEAQPALS*EPCKAG
Trigger: CCCTGCTTTGCAAGGCTCTCAGCTCAAGGCAGGCTG...AGCTTCAGGTACTTCTTGAATCTGAGAAAGTTCGAATTCGGGAAATGAGTAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680365.1
CDS-3UTR GCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGGGGCAAGCTTGGCTTTaGCGGCCTCCAGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMGQAWL*RPPASS
Trigger: AGAAGAAGCTGGAGGCCGGCAAAGCCAAGCTTGCCC...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000679448.1
ENST00000679521.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR GCA 90 bp TTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGAGTTGTCATTTACCTCTGAACTaGAGTCATCTGCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: FICTICCPYISSSSARSCHLPLN*SHLLWL
Trigger: CAACCACAGCAGATGACTGCAGTTCAGAGGTAAATG...ACAACTCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679554.1
CDS-3UTR GCA 90 bp CTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCCATTTACCTCTGAACTaGAGTCATCTGCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LRVPCTLVLIVHFVSSVRHLPLN*SHLLWL
Trigger: CAACCACAGCAGATGACTGCAGTTCAGAGGTAAATG...GCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGTCTTCAATCTCATGCTaGTTCCCAGCCAACTCACTT +
Preference number: 4 (lower is better)
Translates to: SPVRLCRLRVPCTLVLIVSSISC*FPANSL
Trigger: AAGTGAGTTGGCTGGGAAGCAGCATGAGATTGAAGA...CACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGCTCTTCAATCTCATaGTGCTTCCCAGCCAACTCA +
Preference number: 4 (lower is better)
Translates to: LSAMRYLGIRSPVRLCRLSSSIS*CFPANS
Trigger: TGAGTTGGCTGGGAAGCAGCATGAGATTGAAGAGCT...GAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GTTCAGTACTATCTGTGGTTTCAGGTCTCCACTGGGGGTGTTGGACTATACTCTAGCTCTTCAATCTCATaGTGCTTCCCAGCCAACTCA +
Preference number: 4 (lower is better)
Translates to: VQYYLWFQVSTGGVGLYSSSSIS*CFPANS
Trigger: TGAGTTGGCTGGGAAGCAGCATGAGATTGAAGAGCT...AGAGTATAGTCCAACACCCCCAGTGGAGACCTGAAACCACAGATAGTACTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679554.1
CDS-3UTR GCA 90 bp CGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCAGCTCTTCAATCTCATaGTGCTTCCCAGCCAACTCA +
Preference number: 4 (lower is better)
Translates to: RYLGIRSPVRLCRLRVPCSSSIS*CFPANS
Trigger: TGAGTTGGCTGGGAAGCAGCATGAGATTGAAGAGCT...GCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACCTTGCTCTGTGCTACTATGAGTaGTGTTTCTCAGAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: SMSHKKYLGTPSWALHLALCYYE*CFSEFH
Trigger: GTGAAACTCTGAGAAACAGCACTCATAGTAGCACAG...AGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR GCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTGTAAGTCTGCAGCTGTaGTACTATGAGTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVVSLQL*YYECCF
Trigger: GAAACAGCACTCATAGTAGCACAGCTGCAGACTTAC...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp ACTCACAAGAAGCGCCTGCTCCAGTTCTCTTACTCTGAACTCCAGTTTCTCTATATCCTTCAGCACCCCTaGTTGTCATGGTCACAACTC +
Preference number: 4 (lower is better)
Translates to: THKKRLLQFSYSELQFLYILQHP*LSWSQL
Trigger: GAGTTGTGACCATGACAAGCAGGGGTGCTGAAGGAT...ATAGAGAAACTGGAGTTCAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp AGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCATCCTTCAGCACCCCTaGTTGTCATGGTCACAACTC +
Preference number: 4 (lower is better)
Translates to: RLRVPCTLVLIVHFVSSVILQHP*LSWSQL
Trigger: GAGTTGTGACCATGACAAGCAGGGGTGCTGAAGGAT...GACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCCCAGAGAGAGGCAAATaGGTTGGGCTTCCATCTGTA +
Preference number: 4 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTPERGK*VGLPSV
Trigger: TACAGATGGAAGCCCAACGCATTTGCCTCTCTCTGG...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp AGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGAGGAGTGGGATCTGGGCCAGAGAGAGGCAAATaGGTTGGGCTTCCATCTGTA +
Preference number: 4 (lower is better)
Translates to: SPLNEHSRKSFLGGVGSGPERGK*VGLPSV
Trigger: TACAGATGGAAGCCCAACGCATTTGCCTCTCTCTGG...CCCAGATCCCACTCCTCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTTGTTTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGAGCTGTCCCCAGATCTTaGTTAGTCGTGTTTGAAGTA +
Preference number: 4 (lower is better)
Translates to: LVSFALSAAHTSHPALPGAVPRS*LVVFEV
Trigger: TACTTCAAACACGACTAAGCAAGATCTGGGGACAGC...TCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCTGCCGCATATGTGCTTaGCTTAACAATTCCGTTGCC +
Preference number: 4 (lower is better)
Translates to: RYLGIRSPVRLCRLRVPCCRICA*LNNSVA
Trigger: GGCAACGGAATTGTTAAGGCAAGCACATATGCGGCA...GCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp AGGGACAATTCTGGTTTAGCTTCTACAGCTCCAAAGTGTTTTCGGTCCTCTACCTCTGTGTTTGCGTACTaGTGTTGCGCAGCTCACAAC +
Preference number: 4 (lower is better)
Translates to: RDNSGLASTAPKCFRSSTSVFAY*CCAAHN
Trigger: GTTGTGAGCTGCGCAACAGCAGTACGCAAACACAGA...GGTAGAGGACCGAAAACACTTTGGAGCTGTAGAAGCTAAACCAGAATTGTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp AGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCTCTGTGTTTGCGTACTaGTGTTGCGCAGCTCACAAC +
Preference number: 4 (lower is better)
Translates to: RLRVPCTLVLIVHFVSSVSVFAY*CCAAHN
Trigger: GTTGTGAGCTGCGCAACAGCAGTACGCAAACACAGA...GACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTATCTTGGATCTGCTGTTaGTCTGCCTCCAATTCTTGC +
Preference number: 4 (lower is better)
Translates to: QQNHSSQVVVTALFLPQLSWICC*SASNSC
Trigger: GCAAGAATTGGAGGCAGAGCAACAGCAGATCCAAGA...TAACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCGCATCTCGTTCAGCCTaGAATTGTACTTCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: RYLGIRSPVRLCRLRVPCASRSA*NCTSRD
Trigger: GTCCCTAGAAGTACAATTGCAGGCTGAACGAGATGC...GCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTCCTCATGAAGGCGCTCTCGAAGTTCCTCTTGGCACTTAAGGGACTCTGTTGCTGCATATTCCTGAACTaGCTCAAGTTGGATTTGACT +
Preference number: 4 (lower is better)
Translates to: LLMKALSKFLLALKGLCCCIFLN*LKLDLT
Trigger: AGTCAAATCCAACTTGAGGCAGTTCAGGAATATGCA...GCAACAGAGTCCCTTAAGTGCCAAGAGGAACTTCGAGAGCGCCTTCATGAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR GCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGAGGCATTCCATAGCTaGTTGATATTCAACACCCTG +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIEAFHS*LIFNTL
Trigger: CAGGGTGTTGAATATCAAGCAGCTATGGAATGCCTC...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGACTCCTGCAGTTCCGTTaGTCTGTCTTTCATACTGCT +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRLLQFR*SVFHTA
Trigger: AGCAGTATGAAAGACAGAGCAACGGAACTGCAGGAG...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTGAACTCAGCTGCTCCTaGAGTTCCGTTGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSELSCS*SSVALS
Trigger: AGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTC...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp CCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: PYKKSAGHLELHIQQYCNTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...ATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp AAAACATGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACTGCTCTGCAGCTGTaGGTGCAATTCCCGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KTCNFSSLIRKVQDTSSYTALQL*VQFPLP
Trigger: AGGGAGCGGGAATTGCACGCACAGCTGCAGAGCAGT...GTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTGTACCATCACTGCTCTaGAGCTGTGCGTGCAATTCC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSVPSLL*SCACNS
Trigger: GGAATTGCACGCACAGCTGCAGAGCAGTGATGGTAC...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSIVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCGTCCAGTACCATCACTaGTCTGCAGCTGTGCGTGCA +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFVQYHH*SAAVRA
Trigger: TGCACGCACAGCTGCAGAGCAGTGATGGTACTGGAC...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR GCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGATCCTCTAGCTGTTTCTaGAGCTCTTTCAGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRSSSCF*SSFSRS
Trigger: GGACCTACTGAAAGAGCTGCAGAAACAGCTAGAGGA...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp CTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCCGATACCACCTGATCTaGTCTTCCAGCTTCATAACC +
Preference number: 4 (lower is better)
Translates to: LSAMRYLGIRSPVRLCRLRYHLI*SSSFIT
Trigger: GGTTATGAAGCTGGAAGAGCAGATCAGGTGGTATCG...GAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp GAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAAGAACCTGTGACTCGATaGCACCGTCGAACCAAAAAT +
Preference number: 4 (lower is better)
Translates to: EYLAHWCSLCILCHQSAEEPVTR*HRRTKN
Trigger: ATTTTTGGTTCGACGGTGGCATCGAGTCACAGGTTC...TTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000681412.1
ENST00000681722.1
CDS-3UTR GCA 90 bp AATTCCCGCTCCCTATCTAGGGTACTACTCATTTCCCGAATTCGAACTTTCTCAGTTCCAAGTCGTCTTTaGAGTGCCTCTAGCCGAGTG +
Preference number: 4 (lower is better)
Translates to: NSRSLSRVLLISRIRTFSVPSRL*SASSRV
Trigger: CACTCGGCTAGAGGCACTGCAAAGACGACTTGGAAC...TGAGAAAGTTCGAATTCGGGAAATGAGTAGTACCCTAGATAGGGAGCGGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR GCA 90 bp TTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTCTCACAAGAAGCGCCTaGTCCAGTTCTCTTACTCTG +
Preference number: 4 (lower is better)
Translates to: LPLSAMRYLGIRSPVRLCLTRSA*SSSLTL
Trigger: CAGAGTAAGAGAACTGGAGCAGGCGCTTCTTGTGAG...ACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681412.1
CDS-3UTR GCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTATCACATCTCTGAACTaGAGTCATCTGCTGTGGTTG +
Preference number: 4 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVITSLN*SHLLWL
Trigger: CAACCACAGCAGATGACTGCAGTTCAGAGATGTGAT...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674381.2
CDS-3UTR GCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTTTCTGCTCCTGGTGCTaGATCGACTGCAGCATCTAC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSFCSWC*IDCSIY
Trigger: GTAGATGCTGCAGTCGATGCAGCACCAGGAGCAGAA...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680534.1
CDS-3UTR CCA 90 bp CCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGAAACTGGGCAAGCTTaGCTTTGCCGGCCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PYKKSAGHLELHIQQYCNETGQA*LCRPPA
Trigger: AGCTGGAGGCCGGCAAAGCCAAGCTTGCCCAGTTTC...ATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000679448.1
ENST00000679521.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATCAGTCCGCTGAATGAGAGGCAAATGCGTTaGGCTTCCATCTGTAGCCTT +
Preference number: 4 (lower is better)
Translates to: STLHTGAHCAFCVISPLNERQMR*ASICSL
Trigger: AAGGCTACAGATGGAAGCCCAACGCATTTGCCTCTC...ATTCAGCGGACTGATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCAGGCTGGCAGATGACTaGCTTTTACTAGATCTATCT +
Preference number: 4 (lower is better)
Translates to: CSCSWSSRCLSICRICACRLADD*LLLDLS
Trigger: AGATAGATCTAGTAAAAGCCAGTCATCTGCCAGCCT...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR CCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTACCTCCAAATTAGGCTaGCAGATGACTGGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLITSKLG*QMTGFY
Trigger: GTAAAAGCCAGTCATCTGCCAGCCTAATTTGGAGGT...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp GTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGACCTCCAAATTAGGCTaGCAGATGACTGGCTTTTAC +
Preference number: 4 (lower is better)
Translates to: VLQLGSVDSEYLAHWCSLTSKLG*QMTGFY
Trigger: GTAAAAGCCAGTCATCTGCCAGCCTAATTTGGAGGT...CAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CTAGGGTACTACTCATTTCCCGAATTCGAACTTTCTCAGATTCAAGAAGTACCTGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LGYYSFPEFELSQIQEVPAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...AGGTACTTCTTGAATCTGAGAAAGTTCGAATTCGGGAAATGAGTAGTACCCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp AAAACATGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KTCNFSSLIRKVQDTSSYAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...GTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp CCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGCTGTTCTCTGGCCCTaGACTCCTCATGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: PYKKSAGHLELHIQQYCNAVLWP*TPHEGA
Trigger: AGCGCCTTCATGAGGAGTCCAGGGCCAGAGAACAGC...ATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGTAAGTGCTTCCTCCTTAACTCCACCCGATTTGCATGCCTTACCACTTTCTTTCAGCTAGCTGTTCTCTaGCCCTGGACTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: SKCFLLNSTRFACLTTFFQLAVL*PWTPHE
Trigger: TTCATGAGGAGTCCAGGGCCAGAGAACAGCTAGCTG...AAAGAAAGTGGTAAGGCATGCAAATCGGGTGGAGTTAAGGAGGAAGCACTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTCTGGACAGTAATTCTCTTTCTTCTTGGATCTGCTGTTGCTCTGCCTCCAATCAGCTAGCTGTTCTCTaGCCCTGGACTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: CLDSNSLSSWICCCSASNQLAVL*PWTPHE
Trigger: TTCATGAGGAGTCCAGGGCCAGAGAACAGCTAGCTG...ATTGGAGGCAGAGCAACAGCAGATCCAAGAAGAAAGAGAATTACTGTCCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTCAGCTAGCTGTTCTCTaGCCCTGGACTCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSQLAVL*PWTPHE
Trigger: TTCATGAGGAGTCCAGGGCCAGAGAACAGCTAGCTG...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTAGCTGTTCCTGGTCTTCTCGCTGTCTCTCCATTTGCCGCATATGTGCTTGCTGTTCACTGATAGGCTaGAATCGAGGAACAACCTTA +
Preference number: 4 (lower is better)
Translates to: CSCSWSSRCLSICRICACCSLIG*NRGTTL
Trigger: TAAGGTTGTTCCTCGATTCCAGCCTATCAGTGAACA...GCAAGCACATATGCGGCAAATGGAGAGACAGCGAGAAGACCAGGAACAGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR CCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTTTTCCTTTCTGTCTATaGCATCTCGTTCAGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIFPFCL*HLVQPA
Trigger: TGCAGGCTGAACGAGATGCCATAGACAGAAAGGAAA...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATATTCCAAGAGTTCTTaGCTTGGTTTCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPYSKSS*LGFSLS
Trigger: AGAGAGTGAGAAACCAAGCCAAGAACTCTTGGAATA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCATGTTCTTCTGACAACTaGGCATCATATAGCATTCTC +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPCSSDN*ASYSIL
Trigger: GAGAATGCTATATGATGCCCAGTTGTCAGAAGAACA...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTTCTGTCCCTCAGTGTTaGCCTCCTGTTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSSVPQC*PPVLSA
Trigger: TGCAGACAGAACAGGAGGCCAACACTGAGGGACAGA...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TCTGATCTTGAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCATCTGTCCCTCAGTGTTaGCCTCCTGTTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SDLERYVVCLGSPYNSSPSVPQC*PPVLSA
Trigger: TGCAGACAGAACAGGAGGCCAACACTGAGGGACAGA...TGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTCAAGATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000679448.1
ENST00000679457.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp AGTAAGTGCTTCCTCCTTAACTCCACCCGATTTGCATGCCTTACCACTTTCTTTTCTGTCCCTCAGTGTTaGCCTCCTGTTCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: SKCFLLNSTRFACLTTFFSVPQC*PPVLSA
Trigger: TGCAGACAGAACAGGAGGCCAACACTGAGGGACAGA...AAAGAAAGTGGTAAGGCATGCAAATCGGGTGGAGTTAAGGAGGAAGCACTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR CCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTCTCTCAGAGGCTTTCTaGGGTAGAACCTGTAGTTTT +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLILSEAF*GRTCSF
Trigger: AAAACTACAGGTTCTACCCCAGAAAGCCTCTGAGAG...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp CCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATTTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PYKKSAGHLELHIQQYCNLGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...ATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AAAACATGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACTTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KTCNFSSLIRKVQDTSSYLGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...GTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACATGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGTTGGGGACACCAAGCTaGGCTCTTCACCTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMLGTPS*ALHLAG
Trigger: GCCAGCAAGGTGAAGAGCCCAGCTTGGTGTCCCCAA...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSIATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTGTCATCAGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGAGGAGTGGCCACAAGAAGTACTTaGGGACACCAAGCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CVISPLNEHSRKSFLGGVATRST*GHQAGL
Trigger: GAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGC...CACTCCTCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACTGATGACACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp TCTTGCTTCTGGAATTCCTGCATGATTCCTTGTAGTCGCTGTCCTTCAAGGTCTGCATCTTCACATTCCTaGAACCCACCCAGTAACAGC +
Preference number: 4 (lower is better)
Translates to: SCFWNSCMIPCSRCPSRSASSHS*NPPSNS
Trigger: GCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGC...AGACCTTGAAGGACAGCGACTACAAGGAATCATGCAGGAATTCCAGAAGCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679448.1
ENST00000680365.1
ENST00000681216.1
CDS-3UTR CCA 90 bp TTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTGCATCTTCACATTCCTaGAACCCACCCAGTAACAGC +
Preference number: 4 (lower is better)
Translates to: LPLSAMRYLGIRSPVRLCASSHS*NPPSNS
Trigger: GCTGTTACTGGGTGGGTTCCAGGAATGTGAAGATGC...ACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR CCA 90 bp AGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTCCTGGTGAAGCCCTTTaGGCGATTGGTGATCACCTC +
Preference number: 4 (lower is better)
Translates to: SSLIRKVQDTSSYTFSSIPGEAL*AIGDHL
Trigger: GAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGG...AATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTACCTGGTGAAGCCCTTTaGGCGATTGGTGATCACCTC +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVPGEAL*AIGDHL
Trigger: GAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGG...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCCCTGGTGAAGCCCTTTaGGCGATTGGTGATCACCTC +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFPGEAL*AIGDHL
Trigger: GAGGTGATCACCAATCGCCCAAAGGGCTTCACCAGG...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000486313.2
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR CCA 90 bp GCTGTGTTCATATTGGTCCCATTGAATATTCACAATACAAAAGCACAAAAGAACAGTCTCCGCGCTCACTaGCGGATCGTCCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: AVFILVPLNIHNTKAQKNSLRAH*RIVLSR
Trigger: GCGGCTGAGGACGATCCGCCAGTGAGCGCGGAGACT...GTTCTTTTGTGCTTTTGTATTGTGAATATTCAATGGGACCAATATGAACACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp GCTGTGTTCATATTGGTCCCATTGAATATTCACAATACAAAAGCACAAAAGAACCTCCCCCGCCCGAAGTaGAAGCAGTCTCCGCGCTCA +
Preference number: 4 (lower is better)
Translates to: AVFILVPLNIHNTKAQKNLPRPK*KQSPRS
Trigger: TGAGCGCGGAGACTGCTTCCACTTCGGGCGGGGGAG...GTTCTTTTGTGCTTTTGTATTGTGAATATTCAATGGGACCAATATGAACACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp ACATTTTTCATGAAGGTCATTTCTTCATTAGCGGTTTCTACTTGCTGTTCCAAGCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: TFFMKVISSLAVSTCCSKRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...CTTGGAACAGCAAGTAGAAACCGCTAATGAAGAAATGACCTTCATGAAAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679554.1
CDS-3UTR CCA 90 bp GTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTTCATCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: VCFHVLARDLYTIISCVHRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...ATGAACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp AAACAGGAAATTCAACTGATTTCAAATTACATTGCTACCTGTATCAGACCCACCCGATTTGGACGGAGGTaGGACGGCAAGCTCCACGGC +
Preference number: 4 (lower is better)
Translates to: KQEIQLISNYIATCIRPTRFGRR*DGKLHG
Trigger: GCCGTGGAGCTTGCCGTCCCACCTCCGTCCAAATCG...GGTGGGTCTGATACAGGTAGCAATGTAATTTGAAATCAGTTGAATTTCCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679457.1
ENST00000681412.1
CDS-3UTR CCA 90 bp TTTGTGCAAGCTCACTCTTCAGTTCAGCAACCACCATTTTCTCAGAACTCAGCTAAGGAAAGGTCGATTTaGACGGAGGTGGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: FVQAHSSVQQPPFSQNSAKERSI*TEVGRQ
Trigger: TTGCCGTCCCACCTCCGTCCAAATCGACCTTTCCTT...AGCTGAGTTCTGAGAAAATGGTGGTTGCTGAACTGAAGAGTGAGCTTGCACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR CCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTAAGGAAAGGTCGATTTaGACGGAGGTGGGACGGCAA +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSKERSI*TEVGRQ
Trigger: TTGCCGTCCCACCTCCGTCCAAATCGACCTTTCCTT...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR CCA 90 bp CTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAATGTCTCCTCGTCCTCCATaGCCTCTGCAAGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: LIRKVQDTSSYTFSSIVMSPRPP*PLQGRQ
Trigger: CTGCCTTCCTTGCAGAGGCCATGGAGGACGAGGAGA...CATTACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000356239.8
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTCAAATCATGGTGTGCTaGCACATCATGTTTACTGCT +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIQIMVC*HIMFTA
Trigger: AGCAGTAAACATGATGTGTCAGCACACCATGATTTG...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTCATCTGCTGTGGTTaGAATTTCACTTTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIVICCG*NFTFQF
Trigger: GAACTGGAAAGTGAAATTTCAACCACAGCAGATGAC...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GTTCAGTACTATCTGTGGTTTCAGGTCTCCACTGGGGGTGTTGGACTATACTCTCTGATCCACATGAGTTaGATAAACCAGAGAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VQYYLWFQVSTGGVGLYSLIHMS*INQREA
Trigger: TGCCTCTCTCTGGTTTATTCAACTCATGTGGATCAG...AGAGTATAGTCCAACACCCCCAGTGGAGACCTGAAACCACAGATAGTACTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679554.1
CDS-3UTR TCA 90 bp TCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTAGGCTCTGTAGACTCAGAGACTCACTAACAGCTTaGAGCCTCTTCTGTAAACAG +
Preference number: 4 (lower is better)
Translates to: SAMRYLGIRSPVRLCRLRDSLTA*SLFCKQ
Trigger: CTGTTTACAGAAGAGGCTTCAAGCTGTTAGTGAGTC...TCTGAGTCTACAGAGCCTAACTGGAGAACGTATTCCTAAGTAGCGCATGGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp GAGCGATACGTAGTATGTCTTGGTTCTCCATATAACTCCAGCCCACCAGAAGAACAGCACACAGTCCTTTaGTTCTGGTATATCATGGGG +
Preference number: 4 (lower is better)
Translates to: ERYVVCLGSPYNSSPPEEQHTVL*FWYIMG
Trigger: CCCCATGATATACCAGAATCAAAGGACTGTGTGCTG...TTCTTCTGGTGGGCTGGAGTTATATGGAGAACCAAGACATACTACGTATCGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000679457.1
CDS-3UTR TCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGGAGAACATTTCTTCTaGAATAGTCAGCACACAGTC +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLIGEHFF*NSQHTV
Trigger: GACTGTGTGCTGACTATTTCAGAAGAAATGTTCTCC...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TTTCAGTCAATGAGCCACAAGAAGTACTTGGGGACACCAAGCTGGGCTCTTCACAATTCCGTTGCCTGTTaGTGTTCTTGGTATTGTCGT +
Preference number: 4 (lower is better)
Translates to: FQSMSHKKYLGTPSWALHNSVAC*CSWYCR
Trigger: ACGACAATACCAAGAACATCAACAGGCAACGGAATT...GTGAAGAGCCCAGCTTGGTGTCCCCAAGTACTTCTTGTGGCTCATTGACTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTAATTCCGTTGCCTGTTaGTGTTCTTGGTATTGTCGT +
Preference number: 4 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVNSVAC*CSWYCR
Trigger: ACGACAATACCAAGAACATCAACAGGCAACGGAATT...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp ACAACTTCCAGGGTACATTGTTCTCTGTGCATCAGATTCTGTAATTACCACCGACCTCACAAGTCGTTGTaGCAGCTCTGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TTSRVHCSLCIRFCNYHRPHKSL*QLCSFL
Trigger: GAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGG...TCGGTGGTAATTACAGAATCTGATGCACAGAGAACAATGTACCCTGGAAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CTTGTTTCATTTGCACTATCTGCTGCCCATACATCTCATCCAGCTCTGCCCGGATTCGCATGTTCAAGCTaGCTGCTAGTTTCACTTATG +
Preference number: 4 (lower is better)
Translates to: LVSFALSAAHTSHPALPGFACSS*LLVSLM
Trigger: CATAAGTGAAACTAGCAGTCAGCTTGAACATGCGAA...TCCGGGCAGAGCTGGATGAGATGTATGGGCAGCAGATAGTGCAAATGAAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp CCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTTCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: PVCFHVLARDLYTIISCVRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...AACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TCCAGTTTGTTTTCATGTGCTGGCAAGGGATTTGTATACAATCATAAGCTGTGTCGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: SSLFSCAGKGFVYNHKLCRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...ACACAGCTTATGATTGTATACAAATCCCTTGCCAGCACATGAAAACAAACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000491695.2
ENST00000679448.1
ENST00000679457.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681412.1
CDS-3UTR TCA 90 bp GCATTTTGTGTCATCAGTCCGCTGAATGAACATAGTAGGAAATCATTTTTGGGACGCCCTCAGCCTTACTaGGCTCCACAGCTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: AFCVISPLNEHSRKSFLGRPQPY*APQLAV
Trigger: AACAGCTAGCTGTGGAGCTCAGTAAGGCTGAGGGCG...TCCCAAAAATGATTTCCTACTATGTTCATTCAGCGGACTGATGACACAAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CACCATTTTCTCAGAACTCAGCTGCTCCTGCAGTTCCGTTGCTCTGTCTTTCATTCAACCTCTCTAGTTTaGTGTTCACTGATAGGCTGG +
Preference number: 4 (lower is better)
Translates to: HHFLRTQLLLQFRCSVFHSTSLV*CSLIGW
Trigger: CCAGCCTATCAGTGAACATCAAACTAGAGAGGTTGA...ATGAAAGACAGAGCAACGGAACTGCAGGAGCAGCTGAGTTCTGAGAAAATGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679448.1
CDS-3UTR TCA 90 bp CGTTCTCCAGTTAGGCTCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTTCTTGTATATCCCTTTaGAGCTGCTCTTTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RSPVRLCRLRVPCTLVLISCISL*SCSLES
Trigger: GCTCTCTAAAGAGCAGCTTCAAAGGGATATACAAGA...AATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGAGCCTAACTGGAGAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp CCAGCAAAACCACTCCTCACAAGTCGTTGTGACAGCTCTGTTCCTTCCTCAGTTTCTTGTATATCCCTTTaGAGCTGCTCTTTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: PAKPLLTSRCDSSVPSSVSCISL*SCSLES
Trigger: GCTCTCTAAAGAGCAGCTTCAAAGGGATATACAAGA...AACTGAGGAAGGAACAGAGCTGTCACAACGACTTGTGAGGAGTGGTTTTGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674381.2
ENST00000679554.1
CDS-3UTR TCA 90 bp TGCGGCACGGCCTTACCACTTTCTGCCATGCGCTACTTAGGAATACGTTCTCCAGTTCTCTCTTTAAGCTaGATAATTCCTGTGTTAGCT +
Preference number: 4 (lower is better)
Translates to: CGTALPLSAMRYLGIRSPVLSLS*IIPVLA
Trigger: AGCTAACACAGGAATTATTCAGCTTAAAGAGAGAAC...TGGAGAACGTATTCCTAAGTAGCGCATGGCAGAAAGTGGTAAGGCCGTGCCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp TCAGATCCTCAAGTTCTTCTTTATCCCGTTCTTCACTGCGTCCCAACTTGGCTTCAAGTTGGATTTGACTaGCAAGAGCAGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SDPQVLLYPVLHCVPTWLQVGFD*QEQQPL
Trigger: AAGTGGCTGCTGCTCTTGTCAGTCAAATCCAACTTG...AAGCCAAGTTGGGACGCAGTGAAGAACGGGATAAAGAAGAACTTGAGGATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000679448.1
ENST00000681216.1
CDS-3UTR TCA 90 bp AGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTATTGTAGCCTCAAGTTGGATTTaGCTGACAAGAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SLIRKVQDTSSYTFSSIVASSWI*LTRAAA
Trigger: GGCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGC...TACAATACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TGTAACTTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCGCCTCAAGTTGGATTTaGCTGACAAGAGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: CNFSSLIRKVQDTSSYTFASSWI*LTRAAA
Trigger: GGCTGCTGCTCTTGTCAGTCAAATCCAACTTGAGGC...GAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAAGTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TTCAGTAGCCTTATAAGAAAAGTGCAGGACACCTCGAGCTACACATTCAGCAGTTGCTTTGGTAGCCACTaGTTCAGCTCTAAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: FSSLIRKVQDTSSYTFSSCFGSH*FSSKSL
Trigger: GAGGCTCTTAGAGCTGAATCAGTGGCTACCAAAGCA...ACTGCTGAATGTGTAGCTCGAGGTGTCCTGCACTTTTCTTATAAGGCTACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000356239.8
ENST00000359028.7
ENST00000394534.7
ENST00000491695.2
ENST00000679448.1
ENST00000679521.1
ENST00000679821.1
ENST00000680072.1
ENST00000680181.1
ENST00000680365.1
ENST00000680513.1
ENST00000680534.1
ENST00000680766.1
ENST00000680952.1
ENST00000681216.1
ENST00000681412.1
CDS-3UTR TCA 90 bp TCTGTAGACTCAGAGTACCTTGCACACTGGTGCTCATTGTGCATTTTGTGTCATTGCTTTGGTAGCCACTaGTTCAGCTCTAAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SVDSEYLAHWCSLCILCHCFGSH*FSSKSL
Trigger: GAGGCTCTTAGAGCTGAATCAGTGGCTACCAAAGCA...ATGACACAAAATGCACAATGAGCACCAGTGTGCAAGGTACTCTGAGTCTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000679457.1
ENST00000681412.1
ENST00000681722.1
CDS-3UTR TCA 90 bp A