RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP8 (Homo sapiens)

Ensembl gene IDs: ENSG00000105127

Ensembl transcript IDs: ENST00000269701.7, ENST00000537303.5, ENST00000595416.1, ENST00000598597.7, ENST00000599883.2, ENST00000679798.1, ENST00000680199.1, ENST00000680245.1, ENST00000680336.1, ENST00000680461.1, ENST00000681018.1, ENST00000681812.1

Found 779 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACGCCGTAGTCGGGAGCCATGGACTGGGAGAAGAGGGACGGAGGTaGCCGGCTGGGGGAGGGCCCTCCCAGGCCCCGTCCACCCACGTA +
Preference number: 1 (lower is better)
Translates to: HAVVGSHGLGEEGRR*PAGGGPSQAPSTHV
Trigger: TACGTGGGTGGACGGGGCCTGGGAGGGCCCTCCCCCAGCCGGCCACCTCCGTCCCTCTTCTCCCAGTCCATGGCTCCCGACTACGGCGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR CCA 90 bp CTCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGT +
Preference number: 1 (lower is better)
Translates to: LLLSPDASPETVPRR*RPACAAQKPLKRAC
Trigger: ACACGCCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR GCA 90 bp CCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGC +
Preference number: 1 (lower is better)
Translates to: PDASPETVPRRWRPA*AAQKPLKRACGIFG
Trigger: GCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR GCA 90 bp TGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGAG +
Preference number: 1 (lower is better)
Translates to: CQSRDCPTKMATGVR*SEASQKGVWDFWQE
Trigger: CTCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR GCA 90 bp GTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTG +
Preference number: 1 (lower is better)
Translates to: VSSGVGRSDTSGLWE*VDVTRSVPHVNQVL
Trigger: CAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CCA 90 bp GGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAG +
Preference number: 1 (lower is better)
Translates to: GCVSSGVGRSDTSGL*ECVDVTRSVPHVNQ
Trigger: CTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CCA 90 bp TTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGT +
Preference number: 1 (lower is better)
Translates to: LRWVCFQWRRSVRYF*PLGVRGCDAVSATC
Trigger: ACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CCA 90 bp CTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGA +
Preference number: 1 (lower is better)
Translates to: LCTVWFLRLRWVCFQ*RRSVRYFWPLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CCA 90 bp TTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCT +
Preference number: 1 (lower is better)
Translates to: LGRNALCTVWFLRLR*VCFQWRRSVRYFWP
Trigger: AGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR TCA 90 bp AGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGAT +
Preference number: 1 (lower is better)
Translates to: RTKDWDAMPSAQSGS*GCGGCVSSGVGRSD
Trigger: ATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR TCA 90 bp GTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTG +
Preference number: 1 (lower is better)
Translates to: VKRHVTAAKDNVLQL*NLGKKPHDCMRQAV
Trigger: CACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR TCA 90 bp GCTCACCCTGCGATTAAGACGCATCTACACAACACAAACGGATGCTaGGCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTT +
Preference number: 1 (lower is better)
Translates to: AHPAIKTHLHNTNGC*AEMTQRHHRLFKQF
Trigger: AAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTTGTGTAGATGCGTCTTAATCGCAGGGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR GCA 90 bp TTCCAGTGTCCCTCAACTGTCAAAAGACTCAGAAATGCTAAATGCTaGACTCTGGATTCAACTCCCTGCTCCTGGGGTTCATCTTCCCTT +
Preference number: 1 (lower is better)
Translates to: FQCPSTVKRLRNAKC*TLDSTPCSWGSSSL
Trigger: AAGGGAAGATGAACCCCAGGAGCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAGTCTTTTGACAGTTGAGGGACACTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR GCA 90 bp AATATTAGAGAACTGATTCAGCAAGGACTAAAGATTGGGACGCAATaGCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTT +
Preference number: 1 (lower is better)
Translates to: NIRELIQQGLKIGTQ*PLHSLVLEVAVGVF
Trigger: AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTGAATCAGTTCTCTAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR GCA 90 bp CCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAA +
Preference number: 1 (lower is better)
Translates to: PKLDYSIFWEHTPLY*LQTKGERPTHPSSQ
Trigger: TTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR TCA 90 bp CGATTAAGACGCATCTACACAACACAAACGGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTT +
Preference number: 1 (lower is better)
Translates to: RLRRIYTTQTDAEQK*PRGTIVFSSSLFPF
Trigger: AAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTTGTGTAGATGCGTCTTAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp AGCCGGCTCCCCGCTGCTCTCTGGAGCGGGCGCTCCTTCCCCATCTACGGCCCTTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 2 (lower is better)
Translates to: SRLPAALWSGRSFPIYGPSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...AGGGCCGTAGATGGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGCAGCCGGCTCCCCGCTaGTCTCTGGAGCGGGCGCTC +
Preference number: 2 (lower is better)
Translates to: LGVRGCDAVSATCEPGAAQPAPR*SLERAL
Trigger: GAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCTG...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTCAGCCGGCTCCCCGCTaGTCTCTGGAGCGGGCGCTC +
Preference number: 2 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGQPAPR*SLERAL
Trigger: GAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCTG...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp AGCCGGCTCCCCGCTGCTCTCTGGAGCGGGCGCTCCTTCCCCATCTACGGCCCTACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 2 (lower is better)
Translates to: SRLPAALWSGRSFPIYGPTEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...AGGGCCGTAGATGGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCCCTCCGCTGTGTCCGTaGGGCCTTCGTCCTCAGCCG +
Preference number: 2 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVPPLCP*GLRPQP
Trigger: CGGCTGAGGACGAAGGCCCCACGGACACAGCGGAGG...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCT +
Preference number: 2 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVTVPRR*RPACAA
Trigger: AGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGT...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598597.7
3UTR-3UTR CCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCTGCAGCCTCACTTCTaGCCTTGGGGACGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGLQPHF*PWGRPS
Trigger: AGAAGGGCGTCCCCAAGGCCAGAAGTGAGGCTGCAG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: QNRQTEFCRLHGPASCLFATGVR*SEASQK
Trigger: CTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGC...GAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR-3UTR CCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATCGGGAGCCATGGACTaGGAGAAGAGGGACGGAGGT +
Preference number: 2 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRSGAMD*EKRDGG
Trigger: ACCTCCGTCCCTCTTCTCCCAGTCCATGGCTCCCGA...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR TCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGGGGAGTGCGTGGATGTaGCGCGGTCAGTGCCACATG +
Preference number: 2 (lower is better)
Translates to: SALKPGQEATRLHETSREGSAWM*RGQCHM
Trigger: CATGTGGCACTGACCGCGTCACATCCACGCACTCCC...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTC +
Preference number: 2 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGDAEQK*PRGTIV
Trigger: GACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATC...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTC +
Preference number: 2 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVDAEQK*PRGTIV
Trigger: GACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATC...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTCTGAATTCTGTCGGCTaGACGGTCCCGCGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRLNSVG*TVPRPV
Trigger: GACAGGACGCGGGACCGTGCAGCCGACAGAATTCAG...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGATCTACGGCCCTCACTaGTGCTGTAATCACCTCTGC +
Preference number: 2 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVIYGPH*CCNHLC
Trigger: GCAGAGGTGATTACAGCAGCAGTGAGGGCCGTAGAT...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGAACTGCTTCCGTTTCCTaGCCGTGCCATCTGGTCCGA +
Preference number: 2 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRTASVS*PCHLVR
Trigger: TCGGACCAGATGGCACGGGCAGGAAACGGAAGCAGT...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR CCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTCGTAGTCGGGAGCCATaGACTGGGAGAAGAGGGACG +
Preference number: 2 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRRSREP*TGRRGT
Trigger: CGTCCCTCTTCTCCCAGTCCATGGCTCCCGACTACG...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR CAA 90 bp TGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCA +
Preference number: 2 (lower is better)
Translates to: WVCFQWRRSVRYFWP*GVRGCDAVSATCEP
Trigger: TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGTGTCCAGGTTGGTCTTaGACTCCTGGGCTTAAGCTA +
Preference number: 2 (lower is better)
Translates to: LGVRGCDAVSATCEPGAACPGWS*TPGLKL
Trigger: TAGCTTAAGCCCAGGAGTTCAAGACCAACCTGGACA...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAAGGCCACAGGGAAACTaGCACAGCAGGGCCATTTCA +
Preference number: 2 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPRPQGN*HSRAIS
Trigger: TGAAATGGCCCTGCTGTGTCAGTTTCCCTGTGGCCT...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTC +
Preference number: 2 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPDAEQK*PRGTIV
Trigger: GACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATC...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPRWRPA*AAQKPL
Trigger: GAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCT...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR-3UTR CCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGT +
Preference number: 2 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVFLRLR*VCFQWR
Trigger: ACGCCACTGGAAACACACCCACCGCAACCTCAAGAA...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGATCTCAAAAGGGCGTGTaGGATTTTTGGCAAGAGGTC +
Preference number: 2 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGSQKGV*DFWQEV
Trigger: GACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGA...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR-3UTR CCA 90 bp TCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGTCTCAAAAGGGCGTGTaGGATTTTTGGCAAGAGGTC +
Preference number: 2 (lower is better)
Translates to: SFSPLMPVPRLSHEDGDRSQKGV*DFWQEV
Trigger: GACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGA...CCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR-3UTR TCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAACACAAACGGATGCTaGGCAGAAATGACCCAGAGG +
Preference number: 2 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVNTNGC*AEMTQR
Trigger: CCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTT...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 2 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPTEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 2 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCTCCGTTTCCTGCCCGTaGCATCTGGTCCGAAGCGGT +
Preference number: 2 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSSVSCP*HLVRSG
Trigger: ACCGCTTCGGACCAGATGGCACGGGCAGGAAACGGA...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR TCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTTGCTGCGAAGTCCTGTaGAAGTCACACACCATATGG +
Preference number: 2 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFCCEVL*KSHTIW
Trigger: CCATATGGTGTGTGACTTTCACAGGACTTCGCAGCA...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTGGGAGTGCGTGGATGTaGCGCGGTCAGTGCCACATG +
Preference number: 2 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSGSAWM*RGQCHM
Trigger: CATGTGGCACTGACCGCGTCACATCCACGCACTCCC...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTC +
Preference number: 2 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFDAEQK*PRGTIV
Trigger: GACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATC...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAAACACAAACGGATGCTaGGCAGAAATGACCCAGAGG +
Preference number: 2 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPNTNGC*AEMTQR
Trigger: CCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTT...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAAACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 2 (lower is better)
Translates to: YFWPLGVRGCDAVSATCETEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...TTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTAAGGGTCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 2 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGKGPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTT...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 2 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWEKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 2 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGACAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 2 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CTTCTGGCCTTGGGGACGCCCTTCTCATGTGCCGTTCCACAGGGCACCTGCTCTCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 2 (lower is better)
Translates to: LLALGTPFSCAVPQGTCSQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...AGAGCAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTCCCCAAGGCCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGTTTGGGCACTTTCTaGCTCTGCTGCCATTGTCTC +
Preference number: 2 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRGLGTF*LCCHCL
Trigger: GAGACAATGGCAGCAGAGGCAGAAAGTGCCCAAACC...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTGCGGAAGTCACCAGCTaGGTCATCATTTTCGGAGAA +
Preference number: 2 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFAEVTS*VIIFGE
Trigger: TTCTCCGAAAATGATGACGCAGCTGGTGACTTCCGC...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR CCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 2 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGDYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 2 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGLMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GACTTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGCTCCCCGCTGCTCTCTaGAGCGGGCGCTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: DFFINIHLESPLRLLMSRLPAAL*SGRSFP
Trigger: GGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAG...CCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGCAACCCGGGCCAGTTTaGTGTCTGGCTCCTCGTAAA +
Preference number: 2 (lower is better)
Translates to: SALKPGQEATRLHETSREQPGPV*CLAPRK
Trigger: TTTACGAGGAGCCAGACACCAAACTGGCCCGGGTTG...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR TCA 90 bp TACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAATGCTGCGAAGTCCTGTaGAAGTCACACACCATATGG +
Preference number: 2 (lower is better)
Translates to: YFWPLGVRGCDAVSATCECCEVL*KSHTIW
Trigger: CCATATGGTGTGTGACTTTCACAGGACTTCGCAGCA...TTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCAAGAGGTCACTGCCTaGAACTATGACTGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGQEVTA*NYDCCL
Trigger: TAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598597.7
3UTR-3UTR GCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCACACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGTTGTGGTCCACGGAGTaGAGGTGCCGCTGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMLWSTE*RCRWRS
Trigger: GCTCCTCCAGCGGCACCTGCACTCCGTGGACCACAA...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 2 (lower is better)
Translates to: DTSGLWECVDVTRSVPHVDYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...CACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCGGGCAGGAGCAACTCTaGTTTGGGCACTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSGQEQL*FGHFLP
Trigger: AGGCAGAAAGTGCCCAAACCAGAGTTGCTCCTGCCC...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: DTSGLWECVDVTRSVPHVNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...CACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGAAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTGGTCAGTGCCACATGTaGACCAGGTGCTGCGAAGTC +
Preference number: 2 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSGQCHM*TRCCEV
Trigger: GACTTCGCAGCACCTGGTTCACATGTGGCACTGACC...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp CTTAAGAGAACAAGCTTAAAAGGCATGCTCACCCTGCGATTAAGACGCATCTACGGGAGTGCGTGGATGTaGCGCGGTCAGTGCCACATG +
Preference number: 2 (lower is better)
Translates to: LKRTSLKGMLTLRLRRIYGSAWM*RGQCHM
Trigger: CATGTGGCACTGACCGCGTCACATCCACGCACTCCC...GTAGATGCGTCTTAATCGCAGGGTGAGCATGCCTTTTAAGCTTGTTCTCTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp CCAACATGTGAGATGTACAGTTCAAAAGGCCACAGGGAAACTGACACAGCAGGGGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: PTCEMYSSKGHRETDTAGAQSGS*GCGGCV
Trigger: AACACACCCACCGCAACCTCAAGAACCAGACTGTGC...CCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTCACATGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TGTGGGAACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: CGNSVFRLCISLFHFSIRAQSGS*GCGGCV
Trigger: AACACACCCACCGCAACCTCAAGAACCAGACTGTGC...GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTTCCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGCCTCCTTCTCTCCCCTaGTGCCAGTCCCGAGACTGT +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMPPSLP*CQSRDC
Trigger: ACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAGG...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598597.7
3UTR-3UTR GCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGAGCCGTGAGAGGCACTaGTCAGGAGGAAACGCTGGG +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMSRERH*SGGNAG
Trigger: CCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCT...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 2 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAG +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMATGVR*SEASQK
Trigger: CTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGC...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598597.7
3UTR-3UTR GCA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 2 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTATCTACGGCCCTCACTaGTGCTGTAATCACCTCTGC +
Preference number: 2 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPIYGPH*CCNHLC
Trigger: GCAGAGGTGATTACAGCAGCAGTGAGGGCCGTAGAT...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGGTTTGGGCACTTTCTaGCTCTGCTGCCATTGTCTC +
Preference number: 2 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEGLGTF*LCCHCL
Trigger: GAGACAATGGCAGCAGAGGCAGAAAGTGCCCAAACC...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GCAAGCACTGACTCATTAGAAATCCCAGTTGTCATGTTCCTGAGCTTGATGCATACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCT +
Preference number: 2 (lower is better)
Translates to: ASTDSLEIPVVMFLSLMHTVPRR*RPACAA
Trigger: AGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGT...ATGCATCAAGCTCAGGAACATGACAACTGGGATTTCTAATGAGTCAGTGCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCTTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 2 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 2 (lower is better)
Translates to: ATCEPGAAKSCESHTPYGKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...ACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp AAAGGGTCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGTTGTGGTCCACGGAGTaGAGGTGCCGCTGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLLWSTE*RCRWRS
Trigger: GCTCCTCCAGCGGCACCTGCACTCCGTGGACCACAA...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp AGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATAC +
Preference number: 2 (lower is better)
Translates to: RLGKYSTASFLMISQWPAWVCFQ*RRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCA...CGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTATGCATCACCGTGCCTaGCCAAATTCTCTTTGTAAA +
Preference number: 2 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFMHHRA*PNSLCK
Trigger: TTTACAAAGAGAATTTGGCCAGGCACGGTGATGCAT...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCACTCCCCGCTGCTCTCTaGAGCGGGCGCTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSLPAAL*SGRSFP
Trigger: GGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAG...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GACTTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGCCTGCCCGTGCCATCTaGTCCGAAGCGGTCAAACCC +
Preference number: 2 (lower is better)
Translates to: DFFINIHLESPLRLLMSRPARAI*SEAVKP
Trigger: GGGTTTGACCGCTTCGGACCAGATGGCACGGGCAGG...CCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR TCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTGGTCAGTGCCACATGTaGACCAGGTGCTGCGAAGTC +
Preference number: 2 (lower is better)
Translates to: EILLRANLEHMLASLSQIGQCHM*TRCCEV
Trigger: GACTTCGCAGCACCTGGTTCACATGTGGCACTGACC...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCGAGGTGGAACACAAATaGGGTAAAATATTAGAGAAC +
Preference number: 2 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVEVEHK*GKILEN
Trigger: GTTCTCTAATATTTTACCTCATTTGTGTTCCACCTC...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGGCCAACCTGCGGTTGTaGTTGTGGTCCACGGAGTGC +
Preference number: 2 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKANLRL*LWSTEC
Trigger: GCACTCCGTGGACCACAATCACAACCGCAGGTTGGC...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TACGCACTGATTAATCAAGCAGCGCCACATCCCCAGAGTCCCCAGGCAAGCACTGTTCATCTTCCCTTTTaGAAGCTTTTCCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: YALINQAAPHPQSPQASTVHLPF*KLFLSV
Trigger: CACAGACAGGAAAAGCTTTCAAAAGGGAAGATGAAC...AGTGCTTGCCTGGGGACTCTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR TCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGAAGGGTCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 2 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEKGPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTT...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 2 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 2 (lower is better)
Translates to: EILLRANLEHMLASLSQISGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGACGCCCGCCCCCTGCATaGCCATCACGCCGTAGTCGG +
Preference number: 2 (lower is better)
Translates to: SSRYNHPTFIIPSALLSRRPPPA*PSRRSR
Trigger: CCGACTACGGCGTGATGGGCATGCAGGGGGCGGGCG...TCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR CCA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 2 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSDYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACG +
Preference number: 2 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSDTSGL*ECVDVT
Trigger: CGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGCTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 2 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLELMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp ATGCTGAGCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCCTCACTTCTGGCCTTaGGGACGCCCTTCTCATGTG +
Preference number: 2 (lower is better)
Translates to: MLSRNDPEAPSSFQAVYFPHFWP*GRPSHV
Trigger: CACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGG...GAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 2 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTT +
Preference number: 2 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYAQSGS*GCGGCV
Trigger: AACACACCCACCGCAACCTCAAGAACCAGACTGTGC...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGAGGTGGAACACAAATaGGGTAAAATATTAGAGAAC +
Preference number: 2 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPEVEHK*GKILEN
Trigger: GTTCTCTAATATTTTACCTCATTTGTGTTCCACCTC...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp ATGCTCACCCTGCGATTAAGACGCATCTACACAACACAAACGGATGCTGAGCAGCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: MLTLRLRRIYTTQTDAEQHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...CTGCTCAGCATCCGTTTGTGTTGTGTAGATGCGTCTTAATCGCAGGGTGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGGGACGCAATGCCCTCTaGACAGTCTGGTTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQGRNAL*TVWFLR
Trigger: CCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCC...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGA +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMSVRYF*PLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGA...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CTTAAGAGAACAAGCTTAAAAGGCATGCTCACCCTGCGATTAAGACGCATCTACGGGCAGGAGCAACTCTaGTTTGGGCACTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: LKRTSLKGMLTLRLRRIYGQEQL*FGHFLP
Trigger: AGGCAGAAAGTGCCCAAACCAGAGTTGCTCCTGCCC...GTAGATGCGTCTTAATCGCAGGGTGAGCATGCCTTTTAAGCTTGTTCTCTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCGGTCAGTGCCACATGTaGACCAGGTGCTGCGAAGTC +
Preference number: 2 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSGQCHM*TRCCEV
Trigger: GACTTCGCAGCACCTGGTTCACATGTGGCACTGACC...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGTGTCCAGGTTGGTCTTaGACTCCTGGGCTTAAGCTA +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMCPGWS*TPGLKL
Trigger: TAGCTTAAGCCCAGGAGTTCAAGACCAACCTGGACA...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGAACACAAACGGATGCTaGGCAGAAATGACCCAGAGG +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMNTNGC*AEMTQR
Trigger: CCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTT...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGCCTCCTTCTCTCCCCTaGTGCCAGTCCCGAGACTGT +
Preference number: 2 (lower is better)
Translates to: LQAQTLRYFSSIFTICLLPPSLP*CQSRDC
Trigger: ACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAGG...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR GCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 2 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCGGACGCAATGCCCTCTaGACAGTCTGGTTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTGRNAL*TVWFLR
Trigger: CCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCC...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTC +
Preference number: 2 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSRWRPA*AAQKPL
Trigger: GAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCT...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598597.7
3UTR-3UTR GCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACTCCTTCTCTCCTCTTTaGCTCCCAGAGTCGCAGAGT +
Preference number: 2 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYSFSPL*LPESQS
Trigger: ACTCTGCGACTCTGGGAGGCAAAGAGGAGAGAAGGA...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR CCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGA +
Preference number: 2 (lower is better)
Translates to: EILLRANLEHMLASLSQISVRYF*PLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGA...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGA +
Preference number: 2 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVSVRYF*PLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGA...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATAC +
Preference number: 2 (lower is better)
Translates to: PNLYYSKCTTVKRHVTAAWVCFQ*RRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCA...AGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATAC +
Preference number: 2 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVWVCFQ*RRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCA...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGT +
Preference number: 2 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQFLRLR*VCFQWR
Trigger: ACGCCACTGGAAACACACCCACCGCAACCTCAAGAA...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTATGGCAATTTATGTTaGATTATTCCACCTATGGCA +
Preference number: 2 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWEYGNLC*IIPPMA
Trigger: TGCCATAGGTGGAATAATCCAACATAAATTGCCATA...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCTTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 2 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCGGGCAGGAGCAACTCTaGTTTGGGCACTTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTGQEQL*FGHFLP
Trigger: AGGCAGAAAGTGCCCAAACCAGAGTTGCTCCTGCCC...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 2 (lower is better)
Translates to: PNLYYSKCTTVKRHVTAAKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...AGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 2 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGCTACCGACATTTTTaGCTTAAGAGAACAAGCTTA +
Preference number: 2 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFCYRHF*LKRTSL
Trigger: TAAGCTTGTTCTCTTAAGGCAAAAATGTCGGTAGCA...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGATCCGTAGGGCATGGTaGTGTCATAGCCGCCCGCCC +
Preference number: 2 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKIRRAW*CHSRPP
Trigger: GGGCGGGCGGCTATGACAGCACCATGCCCTACGGAT...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR CCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGCTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 2 (lower is better)
Translates to: YSTASFLMISQWPAFPNMLMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGTGCTGCGAAGTCCTGTaGAAGTCACACACCATATGG +
Preference number: 2 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKCCEVL*KSHTIW
Trigger: CCATATGGTGTGTGACTTTCACAGGACTTCGCAGCA...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGAGGTGGAACACAAATaGGGTAAAATATTAGAGAAC +
Preference number: 2 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPEVEHK*GKILEN
Trigger: GTTCTCTAATATTTTACCTCATTTGTGTTCCACCTC...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTCTAGAATGTGCTTGGTaGGTTAGCCCCTGGTATACA +
Preference number: 2 (lower is better)
Translates to: EILLRANLEHMLASLSQILECAW*VSPWYT
Trigger: TGTATACCAGGGGCTAACTCACCAAGCACATTCTAG...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGCTGAATTCTGTCGGCTaGACGGTCCCGCGTCCTGTC +
Preference number: 2 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKLNSVG*TVPRPV
Trigger: GACAGGACGCGGGACCGTGCAGCCGACAGAATTCAG...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp ATGCTGAGCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 2 (lower is better)
Translates to: MLSRNDPEAPSSFQAVYFDYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...GAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 2 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCTCCCAACGCCTTCCCTaGAACAGGGAAATGAGCATC +
Preference number: 2 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSSQRLP*NREMSI
Trigger: GATGCTCATTTCCCTGTTCCAGGGAAGGCGTTGGGA...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR CAA 90 bp GCAAGCACTGACTCATTAGAAATCCCAGTTGTCATGTTCCTGAGCTaGATGCATTCCAGTGTCCCTCAACTGTCAAAAGACTCAGAAATG +
Preference number: 2 (lower is better)
Translates to: ASTDSLEIPVVMFLS*MHSSVPQLSKDSEM
Trigger: CATTTCTGAGTCTTTTGACAGTTGAGGGACACTGGAATGCATCAAGCTCAGGAACATGACAACTGGGATTTCTAATGAGTCAGTGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR TCA 90 bp CTTAAGAGAACAAGCTTAAAAGGCATGCTCACCCTGCGATTAAGACGCATCTACGCGTTTCCCAACATGTaGGATGTACAGTTCAAAAGG +
Preference number: 2 (lower is better)
Translates to: LKRTSLKGMLTLRLRRIYAFPNM*DVQFKR
Trigger: CCTTTTGAACTGTACATCTCACATGTTGGGAAACGC...GTAGATGCGTCTTAATCGCAGGGTGAGCATGCCTTTTAAGCTTGTTCTCTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCATGGTAAAAATCCATTACGCACTGATTAATCAAGCAGCGCCACATCCCCAGCAAGAGGTCACTGCCTaGAACTATGACTGCTGTTTA +
Preference number: 2 (lower is better)
Translates to: FMVKIHYALINQAAPHPQQEVTA*NYDCCL
Trigger: TAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTG...CTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTAATGGATTTTTACCATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CCA 90 bp GCAAGCACTGACTCATTAGAAATCCCAGTTGTCATGTTCCTGAGCTTGATGCATAGCTTTTCCTGTCTGTaGTACTTGCAAGCACAAACC +
Preference number: 2 (lower is better)
Translates to: ASTDSLEIPVVMFLSLMHSFSCL*YLQAQT
Trigger: GGTTTGTGCTTGCAAGTACCACAGACAGGAAAAGCT...ATGCATCAAGCTCAGGAACATGACAACTGGGATTTCTAATGAGTCAGTGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGCCTCACTTCTGGCCTTaGGGACGCCCTTCTCATGTG +
Preference number: 2 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKPHFWP*GRPSHV
Trigger: CACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGG...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGGGACGCAATGCCCTCTaGACAGTCTGGTTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKGRNAL*TVWFLR
Trigger: CCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCC...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 2 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTGCTACCGACATTTTTaGCTTAAGAGAACAAGCTTA +
Preference number: 2 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVCYRHF*LKRTSL
Trigger: TAAGCTTGTTCTCTTAAGGCAAAAATGTCGGTAGCA...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGCTCAGGAGGAAACGCTaGGTCTCTTCACCAAAATTA +
Preference number: 2 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKLRRKR*VSSPKL
Trigger: TAATTTTGGTGAAGAGACCCAGCGTTTCCTCCTGAG...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCCTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 2 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSLMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp CTTCGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 2 (lower is better)
Translates to: LRHQSYGTCIQNRQTEFCQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...ACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp TCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACG +
Preference number: 2 (lower is better)
Translates to: SSRYNHPTFIIPSALLSRDTSGL*ECVDVT
Trigger: CGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC...TCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGT +
Preference number: 2 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSFLRLR*VCFQWR
Trigger: ACGCCACTGGAAACACACCCACCGCAACCTCAAGAA...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTTATGGCAATTTATGTTaGATTATTCCACCTATGGCA +
Preference number: 2 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSYGNLC*IIPPMA
Trigger: TGCCATAGGTGGAATAATCCAACATAAATTGCCATA...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CTTCGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTTTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 2 (lower is better)
Translates to: LRHQSYGTCIQNRQTEFCFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...ACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp ATGCTGAGCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 2 (lower is better)
Translates to: MLSRNDPEAPSSFQAVYFFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...GAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp AGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAGTTCTAATGTTGAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: RGTIVFSSSLFPFSVLMLNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...CAACATTAGAACTGAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp GCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCCATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 2 (lower is better)
Translates to: AEMTQRHHRLFKQFISIFHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...GAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCCATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 2 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp GACTTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 2 (lower is better)
Translates to: DFFINIHLESPLRLLMSRFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...CCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 2 (lower is better)
Translates to: SSRYNHPTFIIPSALLSRNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...TCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGGCGTTTCCCAACATGTaGGATGTACAGTTCAAAAGG +
Preference number: 2 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKAFPNM*DVQFKR
Trigger: CCTTTTGAACTGTACATCTCACATGTTGGGAAACGC...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 2 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR GCA 90 bp TCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAATCTTCTTGAAGAAGTaGTCCTGGCCAATCCCTTTG +
Preference number: 2 (lower is better)
Translates to: SSRYNHPTFIIPSALLSRIFLKK*SWPIPL
Trigger: CAAAGGGATTGGCCAGGAGCACTTCTTCAAGAAGAT...TCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGATGCATCACCGTGCCTaGCCAAATTCTCTTTGTAAA +
Preference number: 2 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKMHHRA*PNSLCK
Trigger: TTTACAAAGAGAATTTGGCCAGGCACGGTGATGCAT...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR TCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGCATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 2 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCATATGGCAATTTATGTTaGATTATTCCACCTATGGCA +
Preference number: 2 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSYGNLC*IIPPMA
Trigger: TGCCATAGGTGGAATAATCCAACATAAATTGCCATA...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR GCA 72 bp AGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGG +
Preference number: 3 (lower is better)
Translates to: SPETVPRRWRPA*AAQKPLKRACG
Trigger: CCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR CCA 72 bp TCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCTCAGAAGCCTCTCAAA +
Preference number: 3 (lower is better)
Translates to: SPDASPETVPRR*RPACAAQKPLK
Trigger: TTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR GCA 72 bp CGAGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTT +
Preference number: 3 (lower is better)
Translates to: RDCPTKMATGVR*SEASQKGVWDF
Trigger: AAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
3UTR GCA 72 bp AGCTGGGGCAGGAGCAACTCTGGTTTGGGCACTTTCTaGCTCTGCTGCCATTGTCTCGGCGCCATTTCCAGC +
Preference number: 3 (lower is better)
Translates to: SWGRSNSGLGTF*LCCHCLGAISS
Trigger: GCTGGAAATGGCGCCGAGACAATGGCAGCAGAGGCAGAAAGTGCCCAAACCAGAGTTGCTCCTGCCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGAGGAGCAACTCTGGTTaGGGCACTTTCTGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVRSNSG*GTFCLC
Trigger: GCAGAGGCAGAAAGTGCCCAAACCAGAGTTGCTCCT...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGAC +
Preference number: 3 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVRYFWP*GVRGCD
Trigger: GTCACATCCACGCACTCCCAAAGGCCAGAAGTATCT...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 3 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR GCA 72 bp GGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCAGTGCCACATGTGAAC +
Preference number: 3 (lower is better)
Translates to: GVGRSDTSGLWE*VDVTRSVPHVN
Trigger: GTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CCA 72 bp TCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACGCGGTCAGTGCCACAT +
Preference number: 3 (lower is better)
Translates to: SSGVGRSDTSGL*ECVDVTRSVPH
Trigger: ATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCTGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 3 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGGTCTGGTTCTTGAGGTaGCGGTGGGTGTGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETVWFLR*RWVCFQ
Trigger: CTGGAAACACACCCACCGCAACCTCAAGAACCAGAC...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR TCA 72 bp GATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGT +
Preference number: 3 (lower is better)
Translates to: DWDAMPSAQSGS*GCGGCVSSGVG
Trigger: ACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CCA 72 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGT +
Preference number: 3 (lower is better)
Translates to: VCFQWRRSVRYF*PLGVRGCDAVS
Trigger: ACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGAC +
Preference number: 3 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWERYFWP*GVRGCD
Trigger: GTCACATCCACGCACTCCCAAAGGCCAGAAGTATCT...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CTTCTGGCCTTGGGGACGCCCTTCTCATGTGCCGTTCCACAGGGCACCTGCTCTTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 3 (lower is better)
Translates to: LLALGTPFSCAVPQGTCSSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...AGAGCAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTCCCCAAGGCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR CCA 72 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGA +
Preference number: 3 (lower is better)
Translates to: VWFLRLRWVCFQ*RRSVRYFWPLG
Trigger: TCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CCA 72 bp AATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATAC +
Preference number: 3 (lower is better)
Translates to: NALCTVWFLRLR*VCFQWRRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp TACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAATGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 3 (lower is better)
Translates to: YFWPLGVRGCDAVSATCEWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...TTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACTGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 3 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCAATGTACTTCAGCTTaGAAACCTGGGCAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGQCTSA*KPGQEA
Trigger: GGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 3 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAAAGGGTCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 3 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR TCA 72 bp AGCAGCGCCACATCCCCAGAGTCCCCAGGCAAGCACTaGCTCATTAGAAATCCCAGTTGTCATGTTCCTGAG +
Preference number: 3 (lower is better)
Translates to: SSATSPESPGKH*LIRNPSCHVPE
Trigger: CTCAGGAACATGACAACTGGGATTTCTAATGAGTCAGTGCTTGCCTGGGGACTCTGGGGATGTGGCGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CAA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTTGCACAGTCTGGTTCTaGAGGTTGCGGTGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPCTVWF*RLRWVC
Trigger: ACACACCCACCGCAACCTCAAGAACCAGACTGTGCA...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 3 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCTCCTGGCCAATCCCTTaGAAAGGATCTGGTTTTGGT +
Preference number: 3 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVSWPIP*KGSGFG
Trigger: ACCAAAACCAGATCCTTTCAAAGGGATTGGCCAGGA...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp TACGCACTGATTAATCAAGCAGCGCCACATCCCCAGAGTCCCCAGGCAAGCACTGTCATGTTCCTGAGCTaGATGCATTCCAGTGTCCCT +
Preference number: 3 (lower is better)
Translates to: YALINQAAPHPQSPQASTVMFLS*MHSSVP
Trigger: AGGGACACTGGAATGCATCAAGCTCAGGAACATGAC...AGTGCTTGCCTGGGGACTCTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CAA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGAAAGGGTCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 3 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWEKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGAGACTCTGCATCAGTTaGTTCCACTTCAGCATCCGC +
Preference number: 3 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRRLCIS*FHFSIR
Trigger: GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCT...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CCAACATGTGAGATGTACAGTTCAAAAGGCCACAGGGAAACTGACACAGCAGGGCTCCTTCTCTCCTCTTaGCCTCCCAGAGTCGCAGAG +
Preference number: 3 (lower is better)
Translates to: PTCEMYSSKGHRETDTAGLLLSS*PPRVAE
Trigger: CTCTGCGACTCTGGGAGGCAAAGAGGAGAGAAGGAG...CCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTCACATGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680461.1
3UTR-3UTR CAA 90 bp CCAACATGTGAGATGTACAGTTCAAAAGGCCACAGGGAAACTGACACAGCAGGGTGCACAGTCTGGTTCTaGAGGTTGCGGTGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: PTCEMYSSKGHRETDTAGCTVWF*RLRWVC
Trigger: ACACACCCACCGCAACCTCAAGAACCAGACTGTGCA...CCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTCACATGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 3 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWESKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp AGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGAC +
Preference number: 3 (lower is better)
Translates to: RLGKYSTASFLMISQWPARYFWP*GVRGCD
Trigger: GTCACATCCACGCACTCCCAAAGGCCAGAAGTATCT...CGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGTTCACTATATGTCTGTaGTTCAAAACACTCTTAGCC +
Preference number: 3 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVFTICL*FKTLLA
Trigger: GGCTAAGAGTGTTTTGAACAACAGACATATAGTGAA...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCTCACTTCTGGCCTaGGGGACGCCCTTCTCATGT +
Preference number: 3 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVASLLA*GTPFSC
Trigger: ACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGGC...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTTGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 3 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTGCACTACCAATGTACTTCAGCTTaGAAACCTGGGCAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: VNQVLRSPVKVTHHMVHYQCTSA*KPGQEA
Trigger: GGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTG...GTAGTGCACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp ACTGTCAAAAGACTCAGAAATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 3 (lower is better)
Translates to: TVKRLRNAKCCTLDSTPCVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...GCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAGTCTTTTGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CAA 90 bp TTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCCGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 3 (lower is better)
Translates to: FFINIHLESPLRLLMSRAVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...GGCCCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CCAACATGTGAGATGTACAGTTCAAAAGGCCACAGGGAAACTGACACAGCAGGGAGACTCTGCATCAGTTaGTTCCACTTCAGCATCCGC +
Preference number: 3 (lower is better)
Translates to: PTCEMYSSKGHRETDTAGRLCIS*FHFSIR
Trigger: GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCT...CCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTCACATGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCTGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 3 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR TCA 72 bp CATGTTACAGCCGCTAAGGACAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCACACGACTGCATGAGA +
Preference number: 3 (lower is better)
Translates to: HVTAAKDNVLQL*NLGKKPHDCMR
Trigger: TCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTGTCCTTAGCGGCTGTAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR GCA 72 bp GATTACAGCATATTCTGGGAGCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAAAGACCAACGCATCCA +
Preference number: 3 (lower is better)
Translates to: DYSIFWEHTPLY*LQTKGERPTHP
Trigger: TGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR GCA 72 bp CCCTCAACTGTCAAAAGACTCAGAAATGCTAAATGCTaGACTCTGGATTCAACTCCCTGCTCCTGGGGTTCA +
Preference number: 3 (lower is better)
Translates to: PSTVKRLRNAKC*TLDSTPCSWGS
Trigger: TGAACCCCAGGAGCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAGTCTTTTGACAGTTGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CAA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCGTCTGGTTCTTGAGGTaGCGGTGGGTGTGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTVWFLR*RWVCFQ
Trigger: CTGGAAACACACCCACCGCAACCTCAAGAACCAGAC...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCGTCTGGTTCTTGAGGTaGCGGTGGGTGTGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSVWFLR*RWVCFQ
Trigger: CTGGAAACACACCCACCGCAACCTCAAGAACCAGAC...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTTCACTATATGTCTGTaGTTCAAAACACTCTTAGCC +
Preference number: 3 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFFTICL*FKTLLA
Trigger: GGCTAAGAGTGTTTTGAACAACAGACATATAGTGAA...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp TTCATGGTAAAAATCCATTACGCACTGATTAATCAAGCAGCGCCACATCCCCAGTCCTGTCTGTGGTACTaGCAAGCACAAACCTTGAGG +
Preference number: 3 (lower is better)
Translates to: FMVKIHYALINQAAPHPQSCLWY*QAQTLR
Trigger: CCTCAAGGTTTGTGCTTGCAAGTACCACAGACAGGA...CTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTAATGGATTTTTACCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CAA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCAGGAGCAACTCTGGTTaGGGCACTTTCTGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSRSNSG*GTFCLC
Trigger: GCAGAGGCAGAAAGTGCCCAAACCAGAGTTGCTCCT...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR TCA 72 bp CGCATCTACACAACACAAACGGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTCTTTTCAAGCAGTTTA +
Preference number: 3 (lower is better)
Translates to: RIYTTQTDAEQK*PRGTIVFSSSL
Trigger: TAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTTGTGTAGATGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp ATGCTGAGCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCAATGTACTTCAGCTTaGAAACCTGGGCAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: MLSRNDPEAPSSFQAVYFQCTSA*KPGQEA
Trigger: GGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTG...GAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp ACTGTCAAAAGACTCAGAAATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 3 (lower is better)
Translates to: TVKRLRNAKCCTLDSTPCSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...GCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAGTCTTTTGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR GCA 72 bp AGAAATGCTAAATGCTGCACTCTGGATTCAACTCCCTaGTCCTGGGGTTCATCTTCCCTTTTGAAAGCTTTT +
Preference number: 3 (lower is better)
Translates to: RNAKCCTLDSTP*SWGSSSLLKAF
Trigger: AAAAGCTTTCAAAAGGGAAGATGAACCCCAGGAGCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR-3UTR CAA 90 bp AGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAGTTCTAATGTTGAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGAC +
Preference number: 3 (lower is better)
Translates to: RGTIVFSSSLFPFSVLMLRYFWP*GVRGCD
Trigger: GTCACATCCACGCACTCCCAAAGGCCAGAAGTATCT...CAACATTAGAACTGAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp TCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGATGCACAGTCTGGTTCTaGAGGTTGCGGTGGGTGTGT +
Preference number: 3 (lower is better)
Translates to: SSRYNHPTFIIPSALLSRCTVWF*RLRWVC
Trigger: ACACACCCACCGCAACCTCAAGAACCAGACTGTGCA...TCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp AGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAGTTCTAATGTTGTCCTGGCCAATCCCTTaGAAAGGATCTGGTTTTGGT +
Preference number: 3 (lower is better)
Translates to: RGTIVFSSSLFPFSVLMLSWPIP*KGSGFG
Trigger: ACCAAAACCAGATCCTTTCAAAGGGATTGGCCAGGA...CAACATTAGAACTGAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAAAGGGTCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 3 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
3UTR-3UTR CAA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCACAATGTACTTCAGCTTaGAAACCTGGGCAAGAAGCC +
Preference number: 3 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSQCTSA*KPGQEA
Trigger: GGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTG...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGCCGGCTCCCCGCTGCTCTCTGGAGCGGGCGCTCCTTCCCCATCTACGGCCCTCCTCCGCTGTGTCCGTaGGGCCTTCGTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: SRLPAALWSGRSFPIYGPPPLCP*GLRPQP
Trigger: CGGCTGAGGACGAAGGCCCCACGGACACAGCGGAGG...AGGGCCGTAGATGGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGCCGGCTCCCCGCTGCTCTCTGGAGCGGGCGCTCCTTCCCCATCTACGGCCCTCCGGCAGGCAGGGCCTaGAGTCATAGGACTCGAACG +
Preference number: 4 (lower is better)
Translates to: SRLPAALWSGRSFPIYGPPAGRA*SHRTRT
Trigger: CGTTCGAGTCCTATGACTCCAGGCCCTGCCTGCCGG...AGGGCCGTAGATGGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGGGCCCCGGCCCCGCATaGAGCCATCAAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVGPGPA*SHQGSP
Trigger: GGGGCTCCCTTGATGGCTTCATGCGGGGCCGGGGCC...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTTCTGGCCTTGGGGACGCCCTTCTCATGTGCCGTTCCACAGGGCACCTGCTCTCGCCCGCCCCCTGCATaGCCATCACGCCGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: LLALGTPFSCAVPQGTCSRPPPA*PSRRSR
Trigger: CCGACTACGGCGTGATGGGCATGCAGGGGGCGGGCG...AGAGCAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTCCCCAAGGCCAGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp AGCCGGCTCCCCGCTGCTCTCTGGAGCGGGCGCTCCTTCCCCATCTACGGCCCTGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SRLPAALWSGRSFPIYGPAQSGS*GCGGCV
Trigger: AACACACCCACCGCAACCTCAAGAACCAGACTGTGC...AGGGCCGTAGATGGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCAGCCGGCTCCCCGCTaGTCTCTGGAGCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGQPAPR*SLERAL
Trigger: GAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCTG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGACCTCCGCTGTGTCCGTaGGGCCTTCGTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGPPLCP*GLRPQP
Trigger: CGGCTGAGGACGAAGGCCCCACGGACACAGCGGAGG...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGAAGGGGTCGCTGCGCATaGAGGTGCCAGGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGRGRCA*RCQGCS
Trigger: GGAGCAACCCTGGCACCTTCATGCGCAGCGACCCCT...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCGCCCGCCCCCTGCATaGCCATCACGCCGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGRPPPA*PSRRSR
Trigger: CCGACTACGGCGTGATGGGCATGCAGGGGGCGGGCG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTTCCTGGAAGCGGCCCTaGCCCCGGCCCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGSWKRP*PRPRMK
Trigger: CTTCATGCGGGGCCGGGGCCAGGGCCGCTTCCAGGA...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGAGCTCGTTCCAGGGCGTaGACAGGGGCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGARSRA*TGAQRT
Trigger: CGTCCTCTGAGCCCCTGTCCACGCCCTGGAACGAGC...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCCTCCCCGCTGCTCTCTaGAGCGGGCGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVLPAAL*SGRSFP
Trigger: GGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAG...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGCCGGCTCCCCGCTGCTCTCTGGAGCGGGCGCTCCTTCCCCATCTACGGCCCTTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: SRLPAALWSGRSFPIYGPFLRLR*VCFQWR
Trigger: ACGCCACTGGAAACACACCCACCGCAACCTCAAGAA...AGGGCCGTAGATGGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGGGCCCCGGCCCCGCATaGAGCCATCAAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRGPGPA*SHQGSP
Trigger: GGGGCTCCCTTGATGGCTTCATGCGGGGCCGGGGCC...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGAGGGGTCGCTGCGCATaGAGGTGCCAGGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAARGRCA*RCQGCS
Trigger: GGAGCAACCCTGGCACCTTCATGCGCAGCGACCCCT...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGTTGTGGTCCACGGAGTaGAGGTGCCGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SFSPLMPVPRLSHEDGDRLWSTE*RCRWRS
Trigger: GCTCCTCCAGCGGCACCTGCACTCCGTGGACCACAA...CCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR GCA 90 bp TCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SFSPLMPVPRLSHEDGDRRWRPA*AAQKPL
Trigger: GAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCT...CCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CCA 90 bp TCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCCTGCCCGTGCCATCTaGTCCGAAGCGGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: SFSPLMPVPRLSHEDGDRPARAI*SEAVKP
Trigger: GGGTTTGACCGCTTCGGACCAGATGGCACGGGCAGG...CCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR GCA 90 bp GGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGCGCCCGCCCCCTGCATaGCCATCACGCCGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: GTCIQNRQTEFCRLHGPARPPPA*PSRRSR
Trigger: CCGACTACGGCGTGATGGGCATGCAGGGGGCGGGCG...CGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGATCCGTAGGGCATGGTaGTGTCATAGCCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAAIRRAW*CHSRPP
Trigger: GGGCGGGCGGCTATGACAGCACCATGCCCTACGGAT...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGATCCGTAGGGCATGGTaGTGTCATAGCCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVIRRAW*CHSRPP
Trigger: GGGCGGGCGGCTATGACAGCACCATGCCCTACGGAT...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGATCCGTTTCCTGCCCGTaGCATCTGGTCCGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGSVSCP*HLVRSG
Trigger: ACCGCTTCGGACCAGATGGCACGGGCAGGAAACGGA...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGACTGAATTCTGTCGGCTaGACGGTCCCGCGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGLNSVG*TVPRPV
Trigger: GACAGGACGCGGGACCGTGCAGCCGACAGAATTCAG...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTCGCCATCATTGGCCTTaGCGGCCTCCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGRHHWP*RPPTRL
Trigger: CAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCG...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGGCCGCCATCATTaGCCTTGGCGGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFPGRHH*PWRPPT
Trigger: CGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGG...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGACGTAGTCGGGAGCCATaGACTGGGAGAAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGRSREP*TGRRGT
Trigger: CGTCCCTCTTCTCCCAGTCCATGGCTCCCGACTACG...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCCTGCCCGTGCCATCTaGTCCGAAGCGGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVPARAI*SEAVKP
Trigger: GGGTTTGACCGCTTCGGACCAGATGGCACGGGCAGG...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGCCGGCTCCCCGCTGCTCTCTGGAGCGGGCGCTCCTTCCCCATCTACGGCCCTGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: SRLPAALWSGRSFPIYGPDYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...AGGGCCGTAGATGGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAATVPRR*RPACAA
Trigger: AGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGT...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598597.7
CDS-3UTR CCA 90 bp CTGGGCTCAAGCAATCCTCCCATCCCAGCTTCCCGAGTAGGGCTAGCCTTGGGTACTGTCCCACGAAGATaGCGACCGGCGTGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGSSNPPIPASRVGLALGTVPRR*RPACAA
Trigger: AGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGT...ACCCAAGGCTAGCCCTACTCGGGAAGCTGGGATGGGAGGATTGCTTGAGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR TCA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTAGGTTGCGCCTGTGGTaGCACTGGTGTTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGRLRLW*HWCSGR
Trigger: GCGCCCAGAACACCAGTGTCACCACAGGCGCAACCT...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTAGGGGTCGCTGCGCATaGAGGTGCCAGGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFRGRCA*RCQGCS
Trigger: GGAGCAACCCTGGCACCTTCATGCGCAGCGACCCCT...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGGGGTCGCTGCGCATaGAGGTGCCAGGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVRGRCA*RCQGCS
Trigger: GGAGCAACCCTGGCACCTTCATGCGCAGCGACCCCT...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGGCCAACCTGCGGTTGTaGTTGTGGTCCACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVANLRL*LWSTEC
Trigger: GCACTCCGTGGACCACAATCACAACCGCAGGTTGGC...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACCGCCCGCCCCCTGCATaGCCATCACGCCGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNRPPPA*PSRRSR
Trigger: CCGACTACGGCGTGATGGGCATGCAGGGGGCGGGCG...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGTCCGTTTCCTGCCCGTaGCATCTGGTCCGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAASVSCP*HLVRSG
Trigger: ACCGCTTCGGACCAGATGGCACGGGCAGGAAACGGA...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGAGCCGTGAGAGGCACTaGTCAGGAGGAAACGCTGGG +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAASRERH*SGGNAG
Trigger: CCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCT...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGAGGCCTCCCACGAGGCTaGGCCGTAGCTGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRGLPRG*AVAVGC
Trigger: GCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCC...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGGCGTGCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGACGCCATCATTGGCCTTaGCGGCCTCCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RRALLRSLSKGRVGFLARRHHWP*RPPTRL
Trigger: CAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCG...TCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CCA 90 bp GCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGAGGTCACCCAGGCCGCCATCATTaGCCTTGGCGGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: ALLRSLSKGRVGFLARGHPGRHH*PWRPPT
Trigger: CGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGG...GTGACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CCA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCCAGGCCGCCATCATTaGCCTTGGCGGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHPGRHH*PWRPPT
Trigger: CGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGG...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGCGTAGTCGGGAGCCATaGACTGGGAGAAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAARSREP*TGRRGT
Trigger: CGTCCCTCTTCTCCCAGTCCATGGCTCCCGACTACG...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCCTCCCCGCTGCTCTCTaGAGCGGGCGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFLPAAL*SGRSFP
Trigger: GGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAG...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGCCTCCGCTGTGTCCGTaGGGCCTTCGTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GTCIQNRQTEFCRLHGPAPPLCP*GLRPQP
Trigger: CGGCTGAGGACGAAGGCCCCACGGACACAGCGGAGG...CGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGGTTGCGCCTGTGGTaGCACTGGTGTTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVRLRLW*HWCSGR
Trigger: GCGCCCAGAACACCAGTGTCACCACAGGCGCAACCT...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR TCA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGAGGTTGCGCCTGTGGTaGCACTGGTGTTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETRLRLW*HWCSGR
Trigger: GCGCCCAGAACACCAGTGTCACCACAGGCGCAACCT...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCCAACCTGCGGTTGTaGTTGTGGTCCACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGANLRL*LWSTEC
Trigger: GCACTCCGTGGACCACAATCACAACCGCAGGTTGGC...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCGGGAGTGCGTGGATGTaGCGCGGTCAGTGCCACATG +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVGSAWM*RGQCHM
Trigger: CATGTGGCACTGACCGCGTCACATCCACGCACTCCC...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTCCTCCTTCTCTCCCCTaGTGCCAGTCCCGAGACTGT +
Preference number: 4 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGPPSLP*CQSRDC
Trigger: ACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAGG...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598597.7
CDS-3UTR GCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGACGCCCTTCTCATGTaGCGTTCCACAGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGDALLM*RSTGHL
Trigger: CAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTC...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGCCTCCCACGAGGCTaGGCCGTAGCTGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRGLPRG*AVAVGC
Trigger: GCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCC...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACGCCATCATTGGCCTTaGCGGCCTCCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YFWPLGVRGCDAVSATCERHHWP*RPPTRL
Trigger: CAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCG...TTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACCCAGGCCGCCATCATTaGCCTTGGCGGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNPGRHH*PWRPPT
Trigger: CGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGG...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTTCCTGGAAGCGGCCCTaGCCCCGGCCCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPSWKRP*PRPRMK
Trigger: CTTCATGCGGGGCCGGGGCCAGGGCCGCTTCCAGGA...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGGCTCGTTCCAGGGCGTaGACAGGGGCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRARSRA*TGAQRT
Trigger: CGTCCTCTGAGCCCCTGTCCACGCCCTGGAACGAGC...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACGCTCGTTCCAGGGCGTaGACAGGGGCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHARSRA*TGAQRT
Trigger: CGTCCTCTGAGCCCCTGTCCACGCCCTGGAACGAGC...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTGCTCAGAAGCCTCTCAAAATCGGGAGCCATGGACTaGGAGAAGAGGGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: RLSHEDGDRRALLRSLSKSGAMD*EKRDGG
Trigger: ACCTCCGTCCCTCTTCTCCCAGTCCATGGCTCCCGA...TTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCACCTGCCCGTGCCATCTaGTCCGAAGCGGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPPARAI*SEAVKP
Trigger: GGGTTTGACCGCTTCGGACCAGATGGCACGGGCAGG...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGCCTCACTTCTGGCCTTaGGGACGCCCTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAAPHFWP*GRPSHV
Trigger: CACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGG...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTTCTGGCCTTGGGGACGCCCTTCTCATGTGCCGTTCCACAGGGCACCTGCTCTGGGCAGGAGCAACTCTaGTTTGGGCACTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: LLALGTPFSCAVPQGTCSGQEQL*FGHFLP
Trigger: AGGCAGAAAGTGCCCAAACCAGAGTTGCTCCTGCCC...AGAGCAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTCCCCAAGGCCAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGAGGTCACAGGTTGCGCCTGTGGTaGCACTGGTGTTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: ALLRSLSKGRVGFLARGHRLRLW*HWCSGR
Trigger: GCGCCCAGAACACCAGTGTCACCACAGGCGCAACCT...GTGACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR TCA 90 bp CAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCGCCAACCTGCGGTTGTaGTTGTGGTCCACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: QNRQTEFCRLHGPASCLFANLRL*LWSTEC
Trigger: GCACTCCGTGGACCACAATCACAACCGCAGGTTGGC...GAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCGGTCAGTGCCACATGTaGACCAGGTGCTGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVGQCHM*TRCCEV
Trigger: GACTTCGCAGCACCTGGTTCACATGTGGCACTGACC...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGGGGAGTGCGTGGATGTaGCGCGGTCAGTGCCACATG +
Preference number: 4 (lower is better)
Translates to: GTCIQNRQTEFCRLHGPAGSAWM*RGQCHM
Trigger: CATGTGGCACTGACCGCGTCACATCCACGCACTCCC...CGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTC +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVDAEQK*PRGTIV
Trigger: GACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATC...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTGCTCAGAAGCCTCTCAAAAGCCGTAGCTGTAGGTTaGGCCTGTGGTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: RLSHEDGDRRALLRSLSKAVAVG*ACGDTG
Trigger: ACCAGTGTCACCACAGGCGCAACCTACAGCTACGGC...TTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR GCA 90 bp CCAACATGTGAGATGTACAGTTCAAAAGGCCACAGGGAAACTGACACAGCAGGGCGCCCGCCCCCTGCATaGCCATCACGCCGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: PTCEMYSSKGHRETDTAGRPPPA*PSRRSR
Trigger: CCGACTACGGCGTGATGGGCATGCAGGGGGCGGGCG...CCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTCACATGTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGTCCGTTTCCTGCCCGTaGCATCTGGTCCGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: DTSGLWECVDVTRSVPHVSVSCP*HLVRSG
Trigger: ACCGCTTCGGACCAGATGGCACGGGCAGGAAACGGA...CACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTCCGTTTCCTGCCCGTaGCATCTGGTCCGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: QNRQTEFCRLHGPASCLFSVSCP*HLVRSG
Trigger: ACCGCTTCGGACCAGATGGCACGGGCAGGAAACGGA...GAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGGACGCCCTTCTCATGTaGCGTTCCACAGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETDALLM*RSTGHL
Trigger: CAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTC...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGGGACGCAATGCCCTCTaGACAGTCTGGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAAGRNAL*TVWFLR
Trigger: CCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCC...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGAATGCACCCTGGGTGTTaGCAGGTCCAGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRMHPGC*QVQHST
Trigger: CGTGGAGTGCTGGACCTGCCAACACCCAGGGTGCAT...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTCCATGCACCCTGGGTGTTaGCAGGTCCAGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: NRQTEFCRLHGPASCLFSMHPGC*QVQHST
Trigger: CGTGGAGTGCTGGACCTGCCAACACCCAGGGTGCAT...GGAGAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTCGTCCTCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGGTTCCATATGCACCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVLLLSPDASPETVPRRWVPYAP*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGGTGCATATGGAAC...CCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAGGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTCCGGCAGGCAGGGCCTaGAGTCATAGGACTCGAACG +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRPAGRA*SHRTRT
Trigger: CGTTCGAGTCCTATGACTCCAGGCCCTGCCTGCCGG...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCTCCTGGGGTTCATCTTCCTCCTGGAAGCGGCCCTaGCCCCGGCCCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: NAKCCTLDSTPCSWGSSSSWKRP*PRPRMK
Trigger: CTTCATGCGGGGCCGGGGCCAGGGCCGCTTCCAGGA...GGAAGATGAACCCCAGGAGCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCTCGGGAGCCATGGACTaGGAGAAGAGGGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVSGAMD*EKRDGG
Trigger: ACCTCCGTCCCTCTTCTCCCAGTCCATGGCTCCCGA...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGCCTGCCCGTGCCATCTaGTCCGAAGCGGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: GTCIQNRQTEFCRLHGPAPARAI*SEAVKP
Trigger: GGGTTTGACCGCTTCGGACCAGATGGCACGGGCAGG...CGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCAACCCGGGCCAGTTTaGTGTCTGGCTCCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVQPGPV*CLAPRK
Trigger: TTTACGAGGAGCCAGACACCAAACTGGCCCGGGTTG...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGATGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATAC +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGWVCFQ*RRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCA...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGGGCCCCGGCCCCGCATaGAGCCATCAAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: YSTASFLMISQWPAFPNMGPGPA*SHQGSP
Trigger: GGGGCTCCCTTGATGGCTTCATGCGGGGCCGGGGCC...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAATEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCACTGCTTCCGTTTCCTaGCCGTGCCATCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: QNRQTEFCRLHGPASCLFTASVS*PCHLVR
Trigger: TCGGACCAGATGGCACGGGCAGGAAACGGAAGCAGT...GAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCACTGCTTCCGTTTCCTaGCCGTGCCATCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVTASVS*PCHLVR
Trigger: TCGGACCAGATGGCACGGGCAGGAAACGGAAGCAGT...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGTTGTGGTCCACGGAGTaGAGGTGCCGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: SALKPGQEATRLHETSRELWSTE*RCRWRS
Trigger: GCTCCTCCAGCGGCACCTGCACTCCGTGGACCACAA...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTTGTGGTCCACGGAGTaGAGGTGCCGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFLWSTE*RCRWRS
Trigger: GCTCCTCCAGCGGCACCTGCACTCCGTGGACCACAA...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACGACGCCCTTCTCATGTaGCGTTCCACAGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHDALLM*RSTGHL
Trigger: CAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTC...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTAGCCGTGAGAGGCACTaGTCAGGAGGAAACGCTGGG +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRSRERH*SGGNAG
Trigger: CCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCT...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCGGACGCAATGCCCTCTaGACAGTCTGGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVGRNAL*TVWFLR
Trigger: CCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCC...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTGCTCAGAAGCCTCTCAAAAGTAGCAGGACCTCTTTaGCTCCCAGAGTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RLSHEDGDRRALLRSLSKVAGPL*LPESQS
Trigger: ACTCTGCGACTCTGGGAGGCAAAGAGGTCCTGCTAC...TTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTATGCACCCTGGGTGTTaGCAGGTCCAGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRMHPGC*QVQHST
Trigger: CGTGGAGTGCTGGACCTGCCAACACCCAGGGTGCAT...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCATAACCTTGCCAGCTaGCCACACCAGTTCCATATG +
Preference number: 4 (lower is better)
Translates to: SFSPLMPVPRLSHEDGDRHNLAS*PHQFHM
Trigger: CATATGGAACTGGTGTGGCCAGCTGGCAAGGTTATG...CCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CCA 90 bp AACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTCCGGAATTGTCGGTGCATaGCTCTGGGCCGTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NRQTEFCRLHGPASCLFSGIVGA*LWAVRG
Trigger: GCCTCTTACGGCCCAGAGCCATGCACCGACAATTCC...GGAGAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000681812.1
CDS-3UTR CCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACCCGGCAGGCAGGGCCTaGAGTCATAGGACTCGAACG +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNPAGRA*SHRTRT
Trigger: CGTTCGAGTCCTATGACTCCAGGCCCTGCCTGCCGG...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGCTCGTTCCAGGGCGTaGACAGGGGCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEARSRA*TGAQRT
Trigger: CGTCCTCTGAGCCCCTGTCCACGCCCTGGAACGAGC...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCAACCCGGGCCAGTTTaGTGTCTGGCTCCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGQPGPV*CLAPRK
Trigger: TTTACGAGGAGCCAGACACCAAACTGGCCCGGGTTG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGGGCAGGAGCAACTCTaGTTTGGGCACTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGGQEQL*FGHFLP
Trigger: AGGCAGAAAGTGCCCAAACCAGAGTTGCTCCTGCCC...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGTCCCAACGCCTTCCCTaGAACAGGGAAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAASQRLP*NREMSI
Trigger: GATGCTCATTTCCCTGTTCCAGGGAAGGCGTTGGGA...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGAGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGATCAACTCCCTGCTCCTaGGGTTCATCTTCCCTTTTG +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGSTPCS*GSSSLL
Trigger: CAAAAGGGAAGATGAACCCCAGGAGCAGGGAGTTGA...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
3UTR CAA 72 bp TTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACA +
Preference number: 4 (lower is better)
Translates to: FQWRRSVRYFWP*GVRGCDAVSAT
Trigger: TGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ATGCTGAGCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCGGCCCCGGCCCCGCATaGAGCCATCAAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: MLSRNDPEAPSSFQAVYFGPGPA*SHQGSP
Trigger: GGGGCTCCCTTGATGGCTTCATGCGGGGCCGGGGCC...GAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGTEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CTGCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCGGGAGTGCGTGGATGTaGCGCGGTCAGTGCCACATG +
Preference number: 4 (lower is better)
Translates to: LLTNQGRKTNASIIPTPSGSAWM*RGQCHM
Trigger: CATGTGGCACTGACCGCGTCACATCCACGCACTCCC...GGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGGGAGTGCGTGGATGTaGCGCGGTCAGTGCCACATG +
Preference number: 4 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEGSAWM*RGQCHM
Trigger: CATGTGGCACTGACCGCGTCACATCCACGCACTCCC...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCAGGCCACAGGGAAACTaGCACAGCAGGGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: QNRQTEFCRLHGPASCLFRPQGN*HSRAIS
Trigger: TGAAATGGCCCTGCTGTGTCAGTTTCCCTGTGGCCT...GAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGCTAGAATGTGCTTGGTaGGTTAGCCCCTGGTATACA +
Preference number: 4 (lower is better)
Translates to: SFSPLMPVPRLSHEDGDRLECAW*VSPWYT
Trigger: TGTATACCAGGGGCTAACTCACCAAGCACATTCTAG...CCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000598597.7
CDS-3UTR TCA 90 bp AACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTCCGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTC +
Preference number: 4 (lower is better)
Translates to: NRQTEFCRLHGPASCLFSDAEQK*PRGTIV
Trigger: GACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATC...GGAGAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCGATGCTGAGCAGAAATaGCCCAGAGGCACCATCGTC +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVDAEQK*PRGTIV
Trigger: GACGATGGTGCCTCTGGGTCATTTCTGCTCAGCATC...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTGCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCATCCGTAGGGCATGGTaGTGTCATAGCCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: LLTNQGRKTNASIIPTPSIRRAW*CHSRPP
Trigger: GGGCGGGCGGCTATGACAGCACCATGCCCTACGGAT...GGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTCAGCCGGCTCCCCGCTaGTCTCTGGAGCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: EILLRANLEHMLASLSQIQPAPR*SLERAL
Trigger: GAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCTG...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 4 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTGGACGCAATGCCCTCTaGACAGTCTGGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFGRNAL*TVWFLR
Trigger: CCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCC...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGAAGCGGAAGGAGCTTaGCAGCTGGCCACACCAGTT +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVREAEGA*QLATPV
Trigger: AACTGGTGTGGCCAGCTGGCAAGCTCCTTCCGCTTC...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
CDS-3UTR CCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGTTCCATATGCACCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPVPYAP*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGGTGCATATGGAAC...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCCCGGCAGGCAGGGCCTaGAGTCATAGGACTCGAACG +
Preference number: 4 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPPAGRA*SHRTRT
Trigger: CGTTCGAGTCCTATGACTCCAGGCCCTGCCTGCCGG...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGCTGCAGCCTCACTTCTaGCCTTGGGGACGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SALKPGQEATRLHETSRELQPHF*PWGRPS
Trigger: AGAAGGGCGTCCCCAAGGCCAGAAGTGAGGCTGCAG...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTGGGCAGGAGCAACTCTaGTTTGGGCACTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFGQEQL*FGHFLP
Trigger: AGGCAGAAAGTGCCCAAACCAGAGTTGCTCCTGCCC...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGSVRYF*PLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGA...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CAA 72 bp AGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTaGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: RLGRNALCTVWF*RLRWVCFQWRR
Trigger: CCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGAACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRTEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCTGCTGCGAAGTCCTGTaGAAGTCACACACCATATGG +
Preference number: 4 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVCCEVL*KSHTIW
Trigger: CCATATGGTGTGTGACTTTCACAGGACTTCGCAGCA...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACAGTCGGAATTGTCGGTaGATGGCTCTGGGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHSRNCR*MALGRK
Trigger: CTTACGGCCCAGAGCCATGCACCGACAATTCCGACT...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGCGCCCGCCCCCTGCATaGCCATCACGCCGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQRPPPA*PSRRSR
Trigger: CCGACTACGGCGTGATGGGCATGCAGGGGGCGGGCG...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCTCCTGGGGTTCATCTTCCATCCGTAGGGCATGGTaGTGTCATAGCCGCCCGCCC +
Preference number: 4 (lower is better)
Translates to: NAKCCTLDSTPCSWGSSSIRRAW*CHSRPP
Trigger: GGGCGGGCGGCTATGACAGCACCATGCCCTACGGAT...GGAAGATGAACCCCAGGAGCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR GCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTTCCTTCTCTCCTCTTTaGCTCCCAGAGTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFSFSPL*LPESQS
Trigger: ACTCTGCGACTCTGGGAGGCAAAGAGGAGAGAAGGA...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
CDS-3UTR GCA 90 bp GCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCCAGCCGGCTCCCCGCTaGTCTCTGGAGCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: AEMTQRHHRLFKQFISIFQPAPR*SLERAL
Trigger: GAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCTG...GAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGCAGCCGGCTCCCCGCTaGTCTCTGGAGCGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKQPAPR*SLERAL
Trigger: GAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCTG...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGACGCCCTTCTCATGTaGCGTTCCACAGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEDALLM*RSTGHL
Trigger: CAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTC...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGAGGTCACGTAGCAGGACCTCTTTaGCTCCCAGAGTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ALLRSLSKGRVGFLARGHVAGPL*LPESQS
Trigger: ACTCTGCGACTCTGGGAGGCAAAGAGGTCCTGCTAC...GTGACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR GCA 90 bp AGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGAGATGGCGACCGGCGTaGGCTGCTCAGAAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RLGKYSTASFLMISQWPARWRPA*AAQKPL
Trigger: GAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCT...CGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598597.7
CDS-3UTR GCA 90 bp AACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTCCCTGGATTCAACTCCCTaGTCCTGGGGTTCATCTTCC +
Preference number: 4 (lower is better)
Translates to: NRQTEFCRLHGPASCLFSLDSTP*SWGSSS
Trigger: GGAAGATGAACCCCAGGAGCAGGGAGTTGAATCCAG...GGAGAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGTTCCATATGCACCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRVPYAP*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGGTGCATATGGAAC...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCGGAATTGTCGGTGCATaGCTCTGGGCCGTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFGIVGA*LWAVRG
Trigger: GCCTCTTACGGCCCAGAGCCATGCACCGACAATTCC...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGTCCTGGAAGCGGCCCTaGCCCCGGCCCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVSWKRP*PRPRMK
Trigger: CTTCATGCGGGGCCGGGGCCAGGGCCGCTTCCAGGA...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTTCCTGGAAGCGGCCCTaGCCCCGGCCCCGCATGAAG +
Preference number: 4 (lower is better)
Translates to: PNLYYSKCTTVKRHVTAASWKRP*PRPRMK
Trigger: CTTCATGCGGGGCCGGGGCCAGGGCCGCTTCCAGGA...AGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTCGTAGTCGGGAGCCATaGACTGGGAGAAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPRSREP*TGRRGT
Trigger: CGTCCCTCTTCTCCCAGTCCATGGCTCCCGACTACG...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGGCCAGTTTGGTGTCTaGCTCCTCGTAAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGGQFGV*LLVKLE
Trigger: TTCCAACTTTACGAGGAGCCAGACACCAAACTGGCC...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCCTGCAGCCTCACTTCTaGCCTTGGGGACGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSLQPHF*PWGRPS
Trigger: AGAAGGGCGTCCCCAAGGCCAGAAGTGAGGCTGCAG...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: DTSGLWECVDVTRSVPHVSVRYF*PLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGA...CACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWESVRYF*PLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGA...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGTCTCAAAAGGGCGTGTaGGATTTTTGGCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAASQKGV*DFWQEV
Trigger: GACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGA...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000598597.7
3UTR CAA 72 bp TTCTGTGGGAACAGCGTCTTTAGACTCTGCATCAGTTaGTTCCACTTCAGCATCCGCGGCAGCTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: FCGNSVFRLCIS*FHFSIRGSWGR
Trigger: CCTGCCCCAGCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTTCCCACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAAGGGTCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVKGPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTT...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGTCAGTGCCACATGTaGACCAGGTGCTGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPGQCHM*TRCCEV
Trigger: GACTTCGCAGCACCTGGTTCACATGTGGCACTGACC...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFAQSGS*GCGGCV
Trigger: AACACACCCACCGCAACCTCAAGAACCAGACTGTGC...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CTCGTCCTCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCAAGAGGTCACTGCCTaGAACTATGACTGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: LVLLLSPDASPETVPRRWQEVTA*NYDCCL
Trigger: TAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTG...CCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAGGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR GCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGACTGCTTCCGTTTCCTaGCCGTGCCATCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLETASVS*PCHLVR
Trigger: TCGGACCAGATGGCACGGGCAGGAAACGGAAGCAGT...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGCGGAAGTCACCAGCTaGGTCATCATTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPAEVTS*VIIFGE
Trigger: TTCTCCGAAAATGATGACGCAGCTGGTGACTTCCGC...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTCGTCCTCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGATCTTCTTGAAGAAGTaGTCCTGGCCAATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: LVLLLSPDASPETVPRRWIFLKK*SWPIPL
Trigger: CAAAGGGATTGGCCAGGAGCACTTCTTCAAGAAGAT...CCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAGGACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR GCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACGGACGCAATGCCCTCTaGACAGTCTGGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNGRNAL*TVWFLR
Trigger: CCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCC...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCGGCCTCCCACGAGGCTaGGCCGTAGCTGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFGLPRG*AVAVGC
Trigger: GCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCC...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGCGCCATCATTGGCCTTaGCGGCCTCCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YSTASFLMISQWPAFPNMRHHWP*RPPTRL
Trigger: CAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCG...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCCGCCATCATTGGCCTTaGCGGCCTCCCACGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFRHHWP*RPPTRL
Trigger: CAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCG...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGGCTCGTTCCAGGGCGTaGACAGGGGCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRARSRA*TGAQRT
Trigger: CGTCCTCTGAGCCCCTGTCCACGCCCTGGAACGAGC...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGGCGTGCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGAGGCCAGTTTGGTGTCTaGCTCCTCGTAAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RRALLRSLSKGRVGFLARGQFGV*LLVKLE
Trigger: TTCCAACTTTACGAGGAGCCAGACACCAAACTGGCC...TCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCCTCCCCGCTGCTCTCTaGAGCGGGCGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTLPAAL*SGRSFP
Trigger: GGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAG...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTCCTCCGCTGTGTCCGTaGGGCCTTCGTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: EILLRANLEHMLASLSQIPPLCP*GLRPQP
Trigger: CGGCTGAGGACGAAGGCCCCACGGACACAGCGGAGG...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTCCTCACTTCTGGCCTTaGGGACGCCCTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: ATCEPGAAKSCESHTPYGPHFWP*GRPSHV
Trigger: CACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGG...ACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTCCTCACTTCTGGCCTTaGGGACGCCCTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPPHFWP*GRPSHV
Trigger: CACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGG...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACTCCCAACGCCTTCCCTaGAACAGGGAAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHSQRLP*NREMSI
Trigger: GATGCTCATTTCCCTGTTCCAGGGAAGGCGTTGGGA...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACG +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRDTSGL*ECVDVT
Trigger: CGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ATCEPGAAKSCESHTPYGALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...ACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CTTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGGCCCCGGCCCCGCATaGAGCCATCAAGGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LASTNLEVFFQHLHYMSVGPGPA*SHQGSP
Trigger: GGGGCTCCCTTGATGGCTTCATGCGGGGCCGGGGCC...AACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR TCA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGTGCTGCGAAGTCCTGTaGAAGTCACACACCATATGG +
Preference number: 4 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRCCEVL*KSHTIW
Trigger: CCATATGGTGTGTGACTTTCACAGGACTTCGCAGCA...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTGCACTACGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: VNQVLRSPVKVTHHMVHYAQSGS*GCGGCV
Trigger: AACACACCCACCGCAACCTCAAGAACCAGACTGTGC...GTAGTGCACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTTGTCCAGGTTGGTCTTaGACTCCTGGGCTTAAGCTA +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRCPGWS*TPGLKL
Trigger: TAGCTTAAGCCCAGGAGTTCAAGACCAACCTGGACA...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGACTAGAATGTGCTTGGTaGGTTAGCCCCTGGTATACA +
Preference number: 4 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRLECAW*VSPWYT
Trigger: TGTATACCAGGGGCTAACTCACCAAGCACATTCTAG...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCCTAGAATGTGCTTGGTaGGTTAGCCCCTGGTATACA +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVLECAW*VSPWYT
Trigger: TGTATACCAGGGGCTAACTCACCAAGCACATTCTAG...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTAACACAAACGGATGCTaGGCAGAAATGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRNTNGC*AEMTQR
Trigger: CCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTT...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp AGACTGTCCCACGAAGATGGCGACCGGCGTGCGCTGCTCAGAAGCCTCTCAAAAAAATCCATTACGCACTaGTTAATCAAGCAGCGCCAC +
Preference number: 4 (lower is better)
Translates to: RLSHEDGDRRALLRSLSKKSITH*LIKQRH
Trigger: GTGGCGCTGCTTGATTAATCAGTGCGTAATGGATTT...TTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGCCATCTTCGTGGGACAGTCT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR GCA 90 bp AGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGACTGCTTCCGTTTCCTaGCCGTGCCATCTGGTCCGA +
Preference number: 4 (lower is better)
Translates to: RLGKYSTASFLMISQWPATASVS*PCHLVR
Trigger: TCGGACCAGATGGCACGGGCAGGAAACGGAAGCAGT...CGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGGACGCAATGCCCTCTaGACAGTCTGGTTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPGRNAL*TVWFLR
Trigger: CCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCC...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp ACTGTCAAAAGACTCAGAAATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCGGCCTCCCACGAGGCTaGGCCGTAGCTGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TVKRLRNAKCCTLDSTPCGLPRG*AVAVGC
Trigger: GCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCC...GCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAGTCTTTTGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCTCGTTCCAGGGCGTaGACAGGGGCTCAGAGGACG +
Preference number: 4 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVARSRA*TGAQRT
Trigger: CGTCCTCTGAGCCCCTGTCCACGCCCTGGAACGAGC...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCCTGCCCGTGCCATCTaGTCCGAAGCGGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRPARAI*SEAVKP
Trigger: GGGTTTGACCGCTTCGGACCAGATGGCACGGGCAGG...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCCAACCCGGGCCAGTTTaGTGTCTGGCTCCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSQPGPV*CLAPRK
Trigger: TTTACGAGGAGCCAGACACCAAACTGGCCCGGGTTG...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGCCTCACTTCTGGCCTTaGGGACGCCCTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: RLGKYSTASFLMISQWPAPHFWP*GRPSHV
Trigger: CACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGG...CGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPDYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCTCAGGAGGAAACGCTaGGTCTCTTCACCAAAATTA +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGLRRKR*VSSPKL
Trigger: TAATTTTGGTGAAGAGACCCAGCGTTTCCTCCTGAG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACG +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNDTSGL*ECVDVT
Trigger: CGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATAC +
Preference number: 4 (lower is better)
Translates to: ELAYRTGKLNSVGCTVPRWVCFQ*RRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCA...ACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNFLRLR*VCFQWR
Trigger: ACGCCACTGGAAACACACCCACCGCAACCTCAAGAA...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 4 (lower is better)
Translates to: GTQCPLHSLVLEVAVGVFLMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...AAACACACCCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCAAGGAGCTTGCCAGCTaGCCACACCAGTTCCATATG +
Preference number: 4 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFKELAS*PHQFHM
Trigger: CATATGGAACTGGTGTGGCCAGCTGGCAAGCTCCTT...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
CDS-3UTR TCA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPTEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGACATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 4 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGCTGCGAAGTCCTGTaGAAGTCACACACCATATGG +
Preference number: 4 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFCCEVL*KSHTIW
Trigger: CCATATGGTGTGTGACTTTCACAGGACTTCGCAGCA...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGTGTCCAGGTTGGTCTTaGACTCCTGGGCTTAAGCTA +
Preference number: 4 (lower is better)
Translates to: SALKPGQEATRLHETSRECPGWS*TPGLKL
Trigger: TAGCTTAAGCCCAGGAGTTCAAGACCAACCTGGACA...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTTGTCCAGGTTGGTCTTaGACTCCTGGGCTTAAGCTA +
Preference number: 4 (lower is better)
Translates to: ELAYRTGKLNSVGCTVPRCPGWS*TPGLKL
Trigger: TAGCTTAAGCCCAGGAGTTCAAGACCAACCTGGACA...ACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCGCGTTTCCCAACATGTaGGATGTACAGTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVAFPNM*DVQFKR
Trigger: CCTTTTGAACTGTACATCTCACATGTTGGGAAACGC...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp AACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTCCCAAGAGGTCACTGCCTaGAACTATGACTGCTGTTTA +
Preference number: 4 (lower is better)
Translates to: NRQTEFCRLHGPASCLFSQEVTA*NYDCCL
Trigger: TAAACAGCAGTCATAGTTTCAGGCAGTGACCTCTTG...GGAGAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR TCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCCTCCTTCTCTCCCCTaGTGCCAGTCCCGAGACTGT +
Preference number: 4 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRPPSLP*CQSRDC
Trigger: ACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAGG...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR GCA 90 bp ATGCTCACCCTGCGATTAAGACGCATCTACACAACACAAACGGATGCTGAGCAGAGTCGGAATTGTCGGTaGATGGCTCTGGGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: MLTLRLRRIYTTQTDAEQSRNCR*MALGRK
Trigger: CTTACGGCCCAGAGCCATGCACCGACAATTCCGACT...CTGCTCAGCATCCGTTTGTGTTGTGTAGATGCGTCTTAATCGCAGGGTGAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGTCCGTTTCCTGCCCGTaGCATCTGGTCCGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: YSTASFLMISQWPAFPNMSVSCP*HLVRSG
Trigger: ACCGCTTCGGACCAGATGGCACGGGCAGGAAACGGA...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGCTGAATTCTGTCGGCTaGACGGTCCCGCGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: YSTASFLMISQWPAFPNMLNSVG*TVPRPV
Trigger: GACAGGACGCGGGACCGTGCAGCCGACAGAATTCAG...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGAATCTTCTTGAAGAAGTaGTCCTGGCCAATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: VWFLRLRWVCFQWRRSVRIFLKK*SWPIPL
Trigger: CAAAGGGATTGGCCAGGAGCACTTCTTCAAGAAGAT...TCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGTTGTGGTCCACGGAGTaGAGGTGCCGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQLWSTE*RCRWRS
Trigger: GCTCCTCCAGCGGCACCTGCACTCCGTGGACCACAA...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCCTTGTGGTCCACGGAGTaGAGGTGCCGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: FFINIHLESPLRLLMSRALWSTE*RCRWRS
Trigger: GCTCCTCCAGCGGCACCTGCACTCCGTGGACCACAA...GGCCCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGATCTACGGCCCTCACTaGTGCTGTAATCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEIYGPH*CCNHLC
Trigger: GCAGAGGTGATTACAGCAGCAGTGAGGGCCGTAGAT...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTATCTACGGCCCTCACTaGTGCTGTAATCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: ATCEPGAAKSCESHTPYGIYGPH*CCNHLC
Trigger: GCAGAGGTGATTACAGCAGCAGTGAGGGCCGTAGAT...ACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: GTCIQNRQTEFCRLHGPAHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...CGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AAAGGGTCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGCGACCACAGCACGCATaGGTTCAGCGCACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLRPQHA*VQRTSA
Trigger: GGCGGAGGTGCGCTGAACGCATGCGTGCTGTGGTCG...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000598597.7
CDS-3UTR CCA 90 bp CCAACATGTGAGATGTACAGTTCAAAAGGCCACAGGGAAACTGACACAGCAGGGGTTCCATATGCACCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: PTCEMYSSKGHRETDTAGVPYAP*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGGTGCATATGGAAC...CCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTCACATGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACCATAACCTTGCCAGCTaGCCACACCAGTTCCATATG +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNHNLAS*PHQFHM
Trigger: CATATGGAACTGGTGTGGCCAGCTGGCAAGGTTATG...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGGGCCTCCCACGAGGCTaGGCCGTAGCTGTAGGTTGC +
Preference number: 4 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKGLPRG*AVAVGC
Trigger: GCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCC...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGCCTGCCCGTGCCATCTaGTCCGAAGCGGTCAAACCC +
Preference number: 4 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQPARAI*SEAVKP
Trigger: GGGTTTGACCGCTTCGGACCAGATGGCACGGGCAGG...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTTCCCAACGCCTTCCCTaGAACAGGGAAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPSQRLP*NREMSI
Trigger: GATGCTCATTTCCCTGTTCCAGGGAAGGCGTTGGGA...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACG +
Preference number: 4 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEDTSGL*ECVDVT
Trigger: CGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATAC +
Preference number: 4 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPWVCFQ*RRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCA...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTGCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: LLTNQGRKTNASIIPTPSFLRLR*VCFQWR
Trigger: ACGCCACTGGAAACACACCCACCGCAACCTCAAGAA...GGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCATGCATCACCGTGCCTaGCCAAATTCTCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RRSVRYFWPLGVRGCDAVMHHRA*PNSLCK
Trigger: TTTACAAAGAGAATTTGGCCAGGCACGGTGATGCAT...GACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GACTTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGAGGTTGCGCCTGTGGTaGCACTGGTGTTCTGGGCGC +
Preference number: 4 (lower is better)
Translates to: DFFINIHLESPLRLLMSRRLRLW*HWCSGR
Trigger: GCGCCCAGAACACCAGTGTCACCACAGGCGCAACCT...CCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ATGCTGAGCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCGCCAACCTGCGGTTGTaGTTGTGGTCCACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: MLSRNDPEAPSSFQAVYFANLRL*LWSTEC
Trigger: GCACTCCGTGGACCACAATCACAACCGCAGGTTGGC...GAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGGAGGTGGAACACAAATaGGGTAAAATATTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: LGVRGCDAVSATCEPGAAEVEHK*GKILEN
Trigger: GTTCTCTAATATTTTACCTCATTTGTGTTCCACCTC...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAGGCCACAGGGAAACTaGCACAGCAGGGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSRPQGN*HSRAIS
Trigger: TGAAATGGCCCTGCTGTGTCAGTTTCCCTGTGGCCT...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGGCGGAAGTCACCAGCTaGGTCATCATTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEAEVTS*VIIFGE
Trigger: TTCTCCGAAAATGATGACGCAGCTGGTGACTTCCGC...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTGCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCGCGGAAGTCACCAGCTaGGTCATCATTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: LLTNQGRKTNASIIPTPSAEVTS*VIIFGE
Trigger: TTCTCCGAAAATGATGACGCAGCTGGTGACTTCCGC...GGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp ATGCTCACCCTGCGATTAAGACGCATCTACACAACACAAACGGATGCTGAGCAGTCCTTCTCTCCTCTTTaGCTCCCAGAGTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: MLTLRLRRIYTTQTDAEQSFSPL*LPESQS
Trigger: ACTCTGCGACTCTGGGAGGCAAAGAGGAGAGAAGGA...CTGCTCAGCATCCGTTTGTGTTGTGTAGATGCGTCTTAATCGCAGGGTGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
CDS-3UTR GCA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGATCTTCTTGAAGAAGTaGTCCTGGCCAATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRIFLKK*SWPIPL
Trigger: CAAAGGGATTGGCCAGGAGCACTTCTTCAAGAAGAT...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCCGACGCCCTTCTCATGTaGCGTTCCACAGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: FFINIHLESPLRLLMSRADALLM*RSTGHL
Trigger: CAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTC...GGCCCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TGTGGGAACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGTTTGGGCACTTTCTaGCTCTGCTGCCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: CGNSVFRLCISLFHFSIRGLGTF*LCCHCL
Trigger: GAGACAATGGCAGCAGAGGCAGAAAGTGCCCAAACC...GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTTCCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp ATGCTCACCCTGCGATTAAGACGCATCTACACAACACAAACGGATGCTGAGCAGGGTTTGGGCACTTTCTaGCTCTGCTGCCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: MLTLRLRRIYTTQTDAEQGLGTF*LCCHCL
Trigger: GAGACAATGGCAGCAGAGGCAGAAAGTGCCCAAACC...CTGCTCAGCATCCGTTTGTGTTGTGTAGATGCGTCTTAATCGCAGGGTGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: SALKPGQEATRLHETSREHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTAGCCGTGAGAGGCACTaGTCAGGAGGAAACGCTGGG +
Preference number: 4 (lower is better)
Translates to: EILLRANLEHMLASLSQISRERH*SGGNAG
Trigger: CCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCT...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 4 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGTGCTACCGACATTTTTaGCTTAAGAGAACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVCYRHF*LKRTSL
Trigger: TAAGCTTGTTCTCTTAAGGCAAAAATGTCGGTAGCA...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTCATGGTAAAAATCCATTACGCACTGATTAATCAAGCAGCGCCACATCCCCAGGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: FMVKIHYALINQAAPHPQATGVR*SEASQK
Trigger: CTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGC...CTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTAATGGATTTTTACCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp GCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTCATAACCTTGCCAGCTaGCCACACCAGTTCCATATG +
Preference number: 4 (lower is better)
Translates to: ATCEPGAAKSCESHTPYGHNLAS*PHQFHM
Trigger: CATATGGAACTGGTGTGGCCAGCTGGCAAGGTTATG...ACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCCATAACCTTGCCAGCTaGCCACACCAGTTCCATATG +
Preference number: 4 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPHNLAS*PHQFHM
Trigger: CATATGGAACTGGTGTGGCCAGCTGGCAAGGTTATG...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000681812.1
CDS-3UTR CCA 90 bp CTTAAGAGAACAAGCTTAAAAGGCATGCTCACCCTGCGATTAAGACGCATCTACTCGGGAGCCATGGACTaGGAGAAGAGGGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: LKRTSLKGMLTLRLRRIYSGAMD*EKRDGG
Trigger: ACCTCCGTCCCTCTTCTCCCAGTCCATGGCTCCCGA...GTAGATGCGTCTTAATCGCAGGGTGAGCATGCCTTTTAAGCTTGTTCTCTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWEFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCATTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACCTGCAGCCTCACTTCTaGCCTTGGGGACGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYLQPHF*PWGRPS
Trigger: AGAAGGGCGTCCCCAAGGCCAGAAGTGAGGCTGCAG...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp ATGCTCACCCTGCGATTAAGACGCATCTACACAACACAAACGGATGCTGAGCAGTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATAC +
Preference number: 4 (lower is better)
Translates to: MLTLRLRRIYTTQTDAEQWVCFQ*RRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCA...CTGCTCAGCATCCGTTTGTGTTGTGTAGATGCGTCTTAATCGCAGGGTGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAATGCATCACCGTGCCTaGCCAAATTCTCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPMHHRA*PNSLCK
Trigger: TTTACAAAGAGAATTTGGCCAGGCACGGTGATGCAT...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACCTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNLMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGAGGGGTCGCTGCGCATaGAGGTGCCAGGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LQAQTLRYFSSIFTICLLRGRCA*RCQGCS
Trigger: GGAGCAACCCTGGCACCTTCATGCGCAGCGACCCCT...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR TCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVTEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCGCCAACCTGCGGTTGTaGTTGTGGTCCACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTANLRL*LWSTEC
Trigger: GCACTCCGTGGACCACAATCACAACCGCAGGTTGGC...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CTGCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCAAGGGTCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LLTNQGRKTNASIIPTPSKGPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTT...GGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTCATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 4 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGGTCAGTGCCACATGTaGACCAGGTGCTGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVGQCHM*TRCCEV
Trigger: GACTTCGCAGCACCTGGTTCACATGTGGCACTGACC...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: YSTASFLMISQWPAFPNMAQSGS*GCGGCV
Trigger: AACACACCCACCGCAACCTCAAGAACCAGACTGTGC...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TACGCACTGATTAATCAAGCAGCGCCACATCCCCAGAGTCCCCAGGCAAGCACTTGCAAGCACAAACCTTaGGGTATTTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: YALINQAAPHPQSPQASTCKHKP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCA...AGTGCTTGCCTGGGGACTCTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR GCA 90 bp AATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCTCCTGGGGTTCATCTTCCGCGGAAGTCACCAGCTaGGTCATCATTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: NAKCCTLDSTPCSWGSSSAEVTS*VIIFGE
Trigger: TTCTCCGAAAATGATGACGCAGCTGGTGACTTCCGC...GGAAGATGAACCCCAGGAGCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR GCA 90 bp ATGCTCACCCTGCGATTAAGACGCATCTACACAACACAAACGGATGCTGAGCAGGCGGAAGTCACCAGCTaGGTCATCATTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: MLTLRLRRIYTTQTDAEQAEVTS*VIIFGE
Trigger: TTCTCCGAAAATGATGACGCAGCTGGTGACTTCCGC...CTGCTCAGCATCCGTTTGTGTTGTGTAGATGCGTCTTAATCGCAGGGTGAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCTTCTCTCCTCTTTaGCTCCCAGAGTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVSFSPL*LPESQS
Trigger: ACTCTGCGACTCTGGGAGGCAAAGAGGAGAGAAGGA...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
CDS-3UTR GCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCCTGAATTCTGTCGGCTaGACGGTCCCGCGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTLNSVG*TVPRPV
Trigger: GACAGGACGCGGGACCGTGCAGCCGACAGAATTCAG...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTGGTTTGGGCACTTTCTaGCTCTGCTGCCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSGLGTF*LCCHCL
Trigger: GAGACAATGGCAGCAGAGGCAGAAAGTGCCCAAACC...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AAAGGGTCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGAGCCGTGAGAGGCACTaGTCAGGAGGAAACGCTGGG +
Preference number: 4 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLSRERH*SGGNAG
Trigger: CCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCT...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCGCGACCGGCGTGCGCTaGTCAGAAGCCTCTCAAAAG +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTATGVR*SEASQK
Trigger: CTTTTGAGAGGCTTCTGAGCAGCGCACGCCGGTCGC...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000598597.7
CDS-3UTR CCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCATGCACCCTGGGTGTTaGCAGGTCCAGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTMHPGC*QVQHST
Trigger: CGTGGAGTGCTGGACCTGCCAACACCCAGGGTGCAT...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCACCAGGCCGCCATCATTaGCCTTGGCGGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSPGRHH*PWRPPT
Trigger: CGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGG...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCCGGAATTGTCGGTGCATaGCTCTGGGCCGTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: FFINIHLESPLRLLMSRAGIVGA*LWAVRG
Trigger: GCCTCTTACGGCCCAGAGCCATGCACCGACAATTCC...GGCCCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCTCGGGAGCCATGGACTaGGAGAAGAGGGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: AEMTQRHHRLFKQFISIFSGAMD*EKRDGG
Trigger: ACCTCCGTCCCTCTTCTCCCAGTCCATGGCTCCCGA...GAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCAACCCGGGCCAGTTTaGTGTCTGGCTCCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRQPGPV*CLAPRK
Trigger: TTTACGAGGAGCCAGACACCAAACTGGCCCGGGTTG...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGCTCCCCGCTGCTCTCTaGAGCGGGCGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKLPAAL*SGRSFP
Trigger: GGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAG...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTCTCCCCGCTGCTCTCTaGAGCGGGCGCTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSLPAAL*SGRSFP
Trigger: GGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAG...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTTAAGAGAACAAGCTTAAAAGGCATGCTCACCCTGCGATTAAGACGCATCTACGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LKRTSLKGMLTLRLRRIYALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...GTAGATGCGTCTTAATCGCAGGGTGAGCATGCCTTTTAAGCTTGTTCTCTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGATGCATCACCGTGCCTaGCCAAATTCTCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRMHHRA*PNSLCK
Trigger: TTTACAAAGAGAATTTGGCCAGGCACGGTGATGCAT...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGTATGGCAATTTATGTTaGATTATTCCACCTATGGCA +
Preference number: 4 (lower is better)
Translates to: GLWECVDVTRSVPHVNQVYGNLC*IIPPMA
Trigger: TGCCATAGGTGGAATAATCCAACATAAATTGCCATA...CACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTCTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 4 (lower is better)
Translates to: ATCEPGAAKSCESHTPYGLMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...ACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCTCTCAAAAGGGCGTGTaGGATTTTTGGCAAGAGGTC +
Preference number: 4 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPSQKGV*DFWQEV
Trigger: GACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGA...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR TCA 90 bp AGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAGTTCTAATGTTGAGGGGTCGCTGCGCATaGAGGTGCCAGGGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RGTIVFSSSLFPFSVLMLRGRCA*RCQGCS
Trigger: GGAGCAACCCTGGCACCTTCATGCGCAGCGACCCCT...CAACATTAGAACTGAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTAGGCCACAGGGAAACTaGCACAGCAGGGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: EILLRANLEHMLASLSQIRPQGN*HSRAIS
Trigger: TGAAATGGCCCTGCTGTGTCAGTTTCCCTGTGGCCT...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGAGGCCACAGGGAAACTaGCACAGCAGGGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVRPQGN*HSRAIS
Trigger: TGAAATGGCCCTGCTGTGTCAGTTTCCCTGTGGCCT...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTAACACAAACGGATGCTaGGCAGAAATGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVNTNGC*AEMTQR
Trigger: CCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTT...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCGCCGTAGCTGTAGGTTaGGCCTGTGGTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTAVAVG*ACGDTG
Trigger: ACCAGTGTCACCACAGGCGCAACCTACAGCTACGGC...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGGCCGTAGCTGTAGGTTaGGCCTGTGGTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKAVAVG*ACGDTG
Trigger: ACCAGTGTCACCACAGGCGCAACCTACAGCTACGGC...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCGCCGTAGCTGTAGGTTaGGCCTGTGGTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: AEMTQRHHRLFKQFISIFAVAVG*ACGDTG
Trigger: ACCAGTGTCACCACAGGCGCAACCTACAGCTACGGC...GAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR GCA 90 bp ACTGTCAAAAGACTCAGAAATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCAGTCGGAATTGTCGGTaGATGGCTCTGGGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: TVKRLRNAKCCTLDSTPCSRNCR*MALGRK
Trigger: CTTACGGCCCAGAGCCATGCACCGACAATTCCGACT...GCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAGTCTTTTGACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR GCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: SALKPGQEATRLHETSREQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CCAACATGTGAGATGTACAGTTCAAAAGGCCACAGGGAAACTGACACAGCAGGGCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PTCEMYSSKGHRETDTAGHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...CCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTCACATGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCATGCTACCGACATTTTTaGCTTAAGAGAACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPCYRHF*LKRTSL
Trigger: TAAGCTTGTTCTCTTAAGGCAAAAATGTCGGTAGCA...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACCAACCCGGGCCAGTTTaGTGTCTGGCTCCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYQPGPV*CLAPRK
Trigger: TTTACGAGGAGCCAGACACCAAACTGGCCCGGGTTG...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGCAACCCGGGCCAGTTTaGTGTCTGGCTCCTCGTAAA +
Preference number: 4 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQQPGPV*CLAPRK
Trigger: TTTACGAGGAGCCAGACACCAAACTGGCCCGGGTTG...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTTTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 4 (lower is better)
Translates to: ELAYRTGKLNSVGCTVPRFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...ACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGCCTCCGCTGTGTCCGTaGGGCCTTCGTCCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKPPLCP*GLRPQP
Trigger: CGGCTGAGGACGAAGGCCCCACGGACACAGCGGAGG...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCCTCAGGAGGAAACGCTaGGTCTCTTCACCAAAATTA +
Preference number: 4 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSLRRKR*VSSPKL
Trigger: TAATTTTGGTGAAGAGACCCAGCGTTTCCTCCTGAG...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCATGCATCACCGTGCCTaGCCAAATTCTCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFMHHRA*PNSLCK
Trigger: TTTACAAAGAGAATTTGGCCAGGCACGGTGATGCAT...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGCTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 4 (lower is better)
Translates to: RLGKYSTASFLMISQWPALMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...CGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTAAGGGTCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVKGPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTT...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGCATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 4 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGGCACAGTCTGGTTCTTaGGGTTGCGGTGGGTGTGTT +
Preference number: 4 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKAQSGS*GCGGCV
Trigger: AACACACCCACCGCAACCTCAAGAACCAGACTGTGC...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGGAGGTGGAACACAAATaGGGTAAAATATTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TKGERPTHPSSQRLPWNREVEHK*GKILEN
Trigger: GTTCTCTAATATTTTACCTCATTTGTGTTCCACCTC...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTTCGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTAGTCGGAATTGTCGGTaGATGGCTCTGGGCCGTAAG +
Preference number: 4 (lower is better)
Translates to: LRHQSYGTCIQNRQTEFCSRNCR*MALGRK
Trigger: CTTACGGCCCAGAGCCATGCACCGACAATTCCGACT...ACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000681812.1
CDS-3UTR GCA 90 bp TATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTTCCCAACATGGCGGAAGTCACCAGCTaGGTCATCATTTTCGGAGAA +
Preference number: 4 (lower is better)
Translates to: YSTASFLMISQWPAFPNMAEVTS*VIIFGE
Trigger: TTCTCCGAAAATGATGACGCAGCTGGTGACTTCCGC...CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTGGTTTGGGCACTTTCTaGCTCTGCTGCCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: EILLRANLEHMLASLSQIGLGTF*LCCHCL
Trigger: GAGACAATGGCAGCAGAGGCAGAAAGTGCCCAAACC...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGGGTTTGGGCACTTTCTaGCTCTGCTGCCATTGTCTC +
Preference number: 4 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQGLGTF*LCCHCL
Trigger: GAGACAATGGCAGCAGAGGCAGAAAGTGCCCAAACC...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACTGCTACCGACATTTTTaGCTTAAGAGAACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHCYRHF*LKRTSL
Trigger: TAAGCTTGTTCTCTTAAGGCAAAAATGTCGGTAGCA...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTTAAGAGAACAAGCTTAAAAGGCATGCTCACCCTGCGATTAAGACGCATCTACAGACAAGTCCCTCTTTaGCTCCCAGAGTCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LKRTSLKGMLTLRLRRIYRQVPL*LPESQS
Trigger: ACTCTGCGACTCTGGGAGGCAAAGAGGGACTTGTCT...GTAGATGCGTCTTAATCGCAGGGTGAGCATGCCTTTTAAGCTTGTTCTCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681812.1
CDS-3UTR CCA 90 bp TTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGATGCACCCTGGGTGTTaGCAGGTCCAGCACTCCACG +
Preference number: 4 (lower is better)
Translates to: LQAQTLRYFSSIFTICLLMHPGC*QVQHST
Trigger: CGTGGAGTGCTGGACCTGCCAACACCCAGGGTGCAT...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGGTTCCATATGCACCCTaGGTGTTGGCAGGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKVPYAP*VLAGPA
Trigger: TGCTGGACCTGCCAACACCCAGGGTGCATATGGAAC...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGGGCCAGTTTGGTGTCTaGCTCCTCGTAAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRGQFGV*LLVKLE
Trigger: TTCCAACTTTACGAGGAGCCAGACACCAAACTGGCC...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTGCACTACTTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VNQVLRSPVKVTHHMVHYFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...GTAGTGCACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACTCCCAACGCCTTCCCTaGAACAGGGAAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYSQRLP*NREMSI
Trigger: GATGCTCATTTCCCTGTTCCAGGGAAGGCGTTGGGA...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCCTCCCAACGCCTTCCCTaGAACAGGGAAATGAGCATC +
Preference number: 4 (lower is better)
Translates to: FFINIHLESPLRLLMSRASQRLP*NREMSI
Trigger: GATGCTCATTTCCCTGTTCCAGGGAAGGCGTTGGGA...GGCCCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGCTCAGGAGGAAACGCTaGGTCTCTTCACCAAAATTA +
Preference number: 4 (lower is better)
Translates to: RLGKYSTASFLMISQWPALRRKR*VSSPKL
Trigger: TAATTTTGGTGAAGAGACCCAGCGTTTCCTCCTGAG...CGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACG +
Preference number: 4 (lower is better)
Translates to: EILLRANLEHMLASLSQIDTSGL*ECVDVT
Trigger: CGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGTGGGTGTGTTTCCAGTaGCGTAGGTCGGTCAGATAC +
Preference number: 4 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQWVCFQ*RRSVRY
Trigger: GTATCTGACCGACCTACGCCACTGGAAACACACCCA...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYFLRLR*VCFQWR
Trigger: ACGCCACTGGAAACACACCCACCGCAACCTCAAGAA...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCGCCCTCTGCACAGTCTaGTTCTTGAGGTTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSALCTV*FLRLRW
Trigger: CCACCGCAACCTCAAGAACCAGACTGTGCAGAGGGC...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCATATGGCAATTTATGTTaGATTATTCCACCTATGGCA +
Preference number: 4 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPYGNLC*IIPPMA
Trigger: TGCCATAGGTGGAATAATCCAACATAAATTGCCATA...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAGGGAGTGCGTGGATGTaGCGCGGTCAGTGCCACATG +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSGSAWM*RGQCHM
Trigger: CATGTGGCACTGACCGCGTCACATCCACGCACTCCC...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGGAGGTGGAACACAAATaGGGTAAAATATTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: SALKPGQEATRLHETSREEVEHK*GKILEN
Trigger: GTTCTCTAATATTTTACCTCATTTGTGTTCCACCTC...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGTGTCCAGGTTGGTCTTaGACTCCTGGGCTTAAGCTA +
Preference number: 4 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVCPGWS*TPGLKL
Trigger: TAGCTTAAGCCCAGGAGTTCAAGACCAACCTGGACA...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCAGGCCACAGGGAAACTaGCACAGCAGGGCCATTTCA +
Preference number: 4 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSRPQGN*HSRAIS
Trigger: TGAAATGGCCCTGCTGTGTCAGTTTCCCTGTGGCCT...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTGCGTTTCCCAACATGTaGGATGTACAGTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSAFPNM*DVQFKR
Trigger: CCTTTTGAACTGTACATCTCACATGTTGGGAAACGC...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCACTGAATTCTGTCGGCTaGACGGTCCCGCGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSLNSVG*TVPRPV
Trigger: GACAGGACGCGGGACCGTGCAGCCGACAGAATTCAG...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCATTGTGGTCCACGGAGTaGAGGTGCCGCTGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSLWSTE*RCRWRS
Trigger: GCTCCTCCAGCGGCACCTGCACTCCGTGGACCACAA...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGATCTACGGCCCTCACTaGTGCTGTAATCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKIYGPH*CCNHLC
Trigger: GCAGAGGTGATTACAGCAGCAGTGAGGGCCGTAGAT...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TCAGCTTTGAAACCTGGGCAAGAAGCCACACGACTGCATGAGACAAGCCGTGAGTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 4 (lower is better)
Translates to: SALKPGQEATRLHETSREFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...CTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTTGCCCAGGTTTCAAAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCCTCAGAAATGCTAAATaGTGCACTCTGGATTCAACT +
Preference number: 4 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPLRNAK*CTLDST
Trigger: AGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAG...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp ACTGTCAAAAGACTCAGAAATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCCATAACCTTGCCAGCTaGCCACACCAGTTCCATATG +
Preference number: 4 (lower is better)
Translates to: TVKRLRNAKCCTLDSTPCHNLAS*PHQFHM
Trigger: CATATGGAACTGGTGTGGCCAGCTGGCAAGGTTATG...GCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAGTCTTTTGACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCACCGGCAGGCAGGGCCTaGAGTCATAGGACTCGAACG +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSPAGRA*SHRTRT
Trigger: CGTTCGAGTCCTATGACTCCAGGCCCTGCCTGCCGG...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCACGTAGTCGGGAGCCATaGACTGGGAGAAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSRSREP*TGRRGT
Trigger: CGTCCCTCTTCTCCCAGTCCATGGCTCCCGACTACG...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACGGCCAGTTTGGTGTCTaGCTCCTCGTAAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYGQFGV*LLVKLE
Trigger: TTCCAACTTTACGAGGAGCCAGACACCAAACTGGCC...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAGTTCTAATGTTGCTGCAGCCTCACTTCTaGCCTTGGGGACGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: RGTIVFSSSLFPFSVLMLLQPHF*PWGRPS
Trigger: AGAAGGGCGTCCCCAAGGCCAGAAGTGAGGCTGCAG...CAACATTAGAACTGAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AAAGGGTCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLSVRYF*PLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGA...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTCATTAGAAATCCCAGTTGTCATGTTCCTGAGCTTGATGCATTCCAGTGTCCCCTAAATGCTGCACTCTaGATTCAACTCCCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LIRNPSCHVPELDAFQCPLNAAL*IQLPAP
Trigger: AGGAGCAGGGAGTTGAATCCAGAGTGCAGCATTTAG...GGGACACTGGAATGCATCAAGCTCAGGAACATGACAACTGGGATTTCTAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR TCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGGCCAACCTGCGGTTGTaGTTGTGGTCCACGGAGTGC +
Preference number: 4 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKANLRL*LWSTEC
Trigger: GCACTCCGTGGACCACAATCACAACCGCAGGTTGGC...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCTGTCCAGGTTGGTCTTaGACTCCTGGGCTTAAGCTA +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTCPGWS*TPGLKL
Trigger: TAGCTTAAGCCCAGGAGTTCAAGACCAACCTGGACA...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGCTAGAATGTGCTTGGTaGGTTAGCCCCTGGTATACA +
Preference number: 4 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVLECAW*VSPWYT
Trigger: TGTATACCAGGGGCTAACTCACCAAGCACATTCTAG...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACCTAGAATGTGCTTGGTaGGTTAGCCCCTGGTATACA +
Preference number: 4 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYLECAW*VSPWYT
Trigger: TGTATACCAGGGGCTAACTCACCAAGCACATTCTAG...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTTCCGTTTCCTGCCCGTaGCATCTGGTCCGAAGCGGT +
Preference number: 4 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSSVSCP*HLVRSG
Trigger: ACCGCTTCGGACCAGATGGCACGGGCAGGAAACGGA...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCACTGAATTCTGTCGGCTaGACGGTCCCGCGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSLNSVG*TVPRPV
Trigger: GACAGGACGCGGGACCGTGCAGCCGACAGAATTCAG...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCATCTTCTTGAAGAAGTaGTCCTGGCCAATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFIFLKK*SWPIPL
Trigger: CAAAGGGATTGGCCAGGAGCACTTCTTCAAGAAGAT...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCATCTACGGCCCTCACTaGTGCTGTAATCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSIYGPH*CCNHLC
Trigger: GCAGAGGTGATTACAGCAGCAGTGAGGGCCGTAGAT...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GACTTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: DFFINIHLESPLRLLMSRKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...CCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AAAGGGTCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: AEMTQRHHRLFKQFISIFKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...GAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCAAGAAGCCACACGACTaGATGAGACAAGCCGTGAGA +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTKKPHD*MRQAVR
Trigger: TCTCACGGCTTGTCTCATGCAGTCGTGTGGCTTCTT...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp AGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAGTTCTAATGTTGTCTGGCCTTTGGGAGTaGGTGGATGTGACGCGGTCA +
Preference number: 4 (lower is better)
Translates to: RGTIVFSSSLFPFSVLMLSGLWE*VDVTRS
Trigger: TGACCGCGTCACATCCACGCACTCCCAAAGGCCAGA...CAACATTAGAACTGAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 4 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 4 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTTTTAGGAAATTCTGTTaGGTGCTAACCTTGAACACA +
Preference number: 4 (lower is better)
Translates to: ATCEPGAAKSCESHTPYGFRKFC*VLTLNT
Trigger: TGTGTTCAAGGTTAGCACGCAACAGAATTTCCTAAA...ACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTTGCTACCGACATTTTTaGCTTAAGAGAACAAGCTTA +
Preference number: 4 (lower is better)
Translates to: ATCEPGAAKSCESHTPYGCYRHF*LKRTSL
Trigger: TAAGCTTGTTCTCTTAAGGCAAAAATGTCGGTAGCA...ACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTCGGGAGCCATGGACTaGGAGAAGAGGGACGGAGGT +
Preference number: 4 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKSGAMD*EKRDGG
Trigger: ACCTCCGTCCCTCTTCTCCCAGTCCATGGCTCCCGA...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTCGTAGTCGGGAGCCATaGACTGGGAGAAGAGGGACG +
Preference number: 4 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSRSREP*TGRRGT
Trigger: CGTCCCTCTTCTCCCAGTCCATGGCTCCCGACTACG...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTTCGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTGGCCAGTTTGGTGTCTaGCTCCTCGTAAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LRHQSYGTCIQNRQTEFCGQFGV*LLVKLE
Trigger: TTCCAACTTTACGAGGAGCCAGACACCAAACTGGCC...ACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCCGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: FFINIHLESPLRLLMSRADYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...GGCCCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQDYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGAGCTTTTCCTGTCTGTaGTACTTGCAAGCACAAACC +
Preference number: 4 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRSFSCL*YLQAQT
Trigger: GGTTTGTGCTTGCAAGTACCACAGACAGGAAAAGCT...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR TCA 90 bp GACTTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGAAGGGTCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: DFFINIHLESPLRLLMSRKGPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTT...CCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCAAGGGTCCTCACCCTTaGGGTATTTTTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTKGPHP*GIFPAS
Trigger: AGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTT...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTGGTCAGTGCCACATGTaGACCAGGTGCTGCGAAGTC +
Preference number: 4 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSGQCHM*TRCCEV
Trigger: GACTTCGCAGCACCTGGTTCACATGTGGCACTGACC...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAGCCGTAGCTGTAGGTTaGGCCTGTGGTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSAVAVG*ACGDTG
Trigger: ACCAGTGTCACCACAGGCGCAACCTACAGCTACGGC...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCCATCTTCTTGAAGAAGTaGTCCTGGCCAATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FFINIHLESPLRLLMSRAIFLKK*SWPIPL
Trigger: CAAAGGGATTGGCCAGGAGCACTTCTTCAAGAAGAT...GGCCCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTCATTAGAAATCCCAGTTGTCATGTTCCTGAGCTTGATGCATTCCAGTGTCCCAGAAATGCTAAATGCTaGACTCTGGATTCAACTCCC +
Preference number: 4 (lower is better)
Translates to: LIRNPSCHVPELDAFQCPRNAKC*TLDSTP
Trigger: GGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCT...GGGACACTGGAATGCATCAAGCTCAGGAACATGACAACTGGGATTTCTAATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTGGAATTGTCGGTGCATaGCTCTGGGCCGTAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSGIVGA*LWAVRG
Trigger: GCCTCTTACGGCCCAGAGCCATGCACCGACAATTCC...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCACCTCACTTCTGGCCTTaGGGACGCCCTTCTCATGTG +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSPHFWP*GRPSHV
Trigger: CACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGG...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AAAGGGTCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGGATTACAGCATATTCTaGGAGCACACGCCCTTGTAC +
Preference number: 4 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLDYSIF*EHTPLY
Trigger: GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATC...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTCTCAGGAGGAAACGCTaGGTCTCTTCACCAAAATTA +
Preference number: 4 (lower is better)
Translates to: PNLYYSKCTTVKRHVTAALRRKR*VSSPKL
Trigger: TAATTTTGGTGAAGAGACCCAGCGTTTCCTCCTGAG...AGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTGCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCTATGGCAATTTATGTTaGATTATTCCACCTATGGCA +
Preference number: 4 (lower is better)
Translates to: LLTNQGRKTNASIIPTPSYGNLC*IIPPMA
Trigger: TGCCATAGGTGGAATAATCCAACATAAATTGCCATA...GGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
3UTR CAA 72 bp GACTCATTAGAAATCCCAGTTGTCATGTTCCTGAGCTaGATGCATTCCAGTGTCCCTCAACTGTCAAAAGAC +
Preference number: 4 (lower is better)
Translates to: DSLEIPVVMFLS*MHSSVPQLSKD
Trigger: GTCTTTTGACAGTTGAGGGACACTGGAATGCATCAAGCTCAGGAACATGACAACTGGGATTTCTAATGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR TCA 90 bp AAAGGGTCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTGAGGTGGAACACAAATaGGGTAAAATATTAGAGAAC +
Preference number: 4 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVEVEHK*GKILEN
Trigger: GTTCTCTAATATTTTACCTCATTTGTGTTCCACCTC...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GACTTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCGTTTCCCAACATGTaGGATGTACAGTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DFFINIHLESPLRLLMSRAFPNM*DVQFKR
Trigger: CCTTTTGAACTGTACATCTCACATGTTGGGAAACGC...CCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp ACTGTCAAAAGACTCAGAAATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCGTTCATCTTCCCTTTTaGAAGCTTTTCCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: TVKRLRNAKCCTLDSTPCVHLPF*KLFLSV
Trigger: CACAGACAGGAAAAGCTTTCAAAAGGGAAGATGAAC...GCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATTTCTGAGTCTTTTGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR GCA 90 bp TTCATGGTAAAAATCCATTACGCACTGATTAATCAAGCAGCGCCACATCCCCAGCAAAGCTACGGAACTTaGATACAGAACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: FMVKIHYALINQAAPHPQQSYGT*IQNRQT
Trigger: AGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTG...CTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTAATGGATTTTTACCATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR GCA 90 bp AAAGGGTCCTCACCCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGATCTTCTTGAAGAAGTaGTCCTGGCCAATCCCTTTG +
Preference number: 4 (lower is better)
Translates to: KGSSPLRYFSSIFTICLLIFLKK*SWPIPL
Trigger: CAAAGGGATTGGCCAGGAGCACTTCTTCAAGAAGAT...CAACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CTTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGGCCAGTTTGGTGTCTaGCTCCTCGTAAAGTTGGAA +
Preference number: 4 (lower is better)
Translates to: LASTNLEVFFQHLHYMSVGQFGV*LLVKLE
Trigger: TTCCAACTTTACGAGGAGCCAGACACCAAACTGGCC...AACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAGGGCAGGAGCAACTCTaGTTTGGGCACTTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSGQEQL*FGHFLP
Trigger: AGGCAGAAAGTGCCCAAACCAGAGTTGCTCCTGCCC...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAACAGAACAGGCAAACTaGATTCTGTCGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSTEQAN*ILSAAR
Trigger: CCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGT...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCATCAGTGGCTGTATTaGACAAGTAATGTATCATCA +
Preference number: 4 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRHQWLY*TSNVSS
Trigger: TGATGATACATTACTTGTTCAATACAGCCACTGATG...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCATGCTGCGAAGTCCTGTaGAAGTCACACACCATATGG +
Preference number: 4 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSCCEVL*KSHTIW
Trigger: CCATATGGTGTGTGACTTTCACAGGACTTCGCAGCA...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp TCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAATCTACGGCCCTCACTaGTGCTGTAATCACCTCTGC +
Preference number: 4 (lower is better)
Translates to: SSRYNHPTFIIPSALLSRIYGPH*CCNHLC
Trigger: GCAGAGGTGATTACAGCAGCAGTGAGGGCCGTAGAT...TCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCTTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAGATACTTCTGGCCTTTaGGAGTGCGTGGATGTGACG +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSDTSGL*ECVDVT
Trigger: CGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTCGGTCAGATACTTCTaGCCTTTGGGAGTGCGTGGA +
Preference number: 4 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKSVRYF*PLGVRG
Trigger: TCCACGCACTCCCAAAGGCCAGAAGTATCTGACCGA...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTCTTGAGGTTGCGGTaGGTGTGTTTCCAGTGGCGT +
Preference number: 4 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKFLRLR*VCFQWR
Trigger: ACGCCACTGGAAACACACCCACCGCAACCTCAAGAA...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCATGCATCACCGTGCCTaGCCAAATTCTCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTMHHRA*PNSLCK
Trigger: TTTACAAAGAGAATTTGGCCAGGCACGGTGATGCAT...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAACACAAACGGATGCTaGGCAGAAATGACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSNTNGC*AEMTQR
Trigger: CCTCTGGGTCATTTCTGCTCAGCATCCGTTTGTGTT...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAATGTACTTCAGCTTTaGAACCTGGGCAAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSNVLQL*NLGKKP
Trigger: TGGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATT...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp AGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAGTTCTAATGTTGGCGTTTCCCAACATGTaGGATGTACAGTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RGTIVFSSSLFPFSVLMLAFPNM*DVQFKR
Trigger: CCTTTTGAACTGTACATCTCACATGTTGGGAAACGC...CAACATTAGAACTGAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR GCA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTCACACGCCCTTGTACTaGTTACAAACCAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSHTPLY*LQTKGE
Trigger: TTCTCCCTTGGTTTGTAAGCAGTACAAGGGCGTGTG...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTATGGCAATTTATGTTaGATTATTCCACCTATGGCA +
Preference number: 4 (lower is better)
Translates to: EILLRANLEHMLASLSQIYGNLC*IIPPMA
Trigger: TGCCATAGGTGGAATAATCCAACATAAATTGCCATA...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCACTAATGATTTCCCAGTaGCCAGCGTTTCCCAACATG +
Preference number: 4 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSLMISQ*PAFPNM
Trigger: CATGTTGGGAAACGCTGGCCACTGGGAAATCATTAG...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR TCA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTGCGTTTCCCAACATGTaGGATGTACAGTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSAFPNM*DVQFKR
Trigger: CCTTTTGAACTGTACATCTCACATGTTGGGAAACGC...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCATTTACAATGTATTCCTaGAGGAACTCCACGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSFTMYS*RNSTVL
Trigger: CAAGACCGTGGAGTTCCTCCAGGAATACATTGTAAA...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp TCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGACTCAGGAGGAAACGCTaGGTCTCTTCACCAAAATTA +
Preference number: 4 (lower is better)
Translates to: SSRYNHPTFIIPSALLSRLRRKR*VSSPKL
Trigger: TAATTTTGGTGAAGAGACCCAGCGTTTCCTCCTGAG...TCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CCA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCTATGGCAATTTATGTTaGATTATTCCACCTATGGCA +
Preference number: 4 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSYGNLC*IIPPMA
Trigger: TGCCATAGGTGGAATAATCCAACATAAATTGCCATA...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS TCA 90 bp CCCAAGCCAGCACGCGCCGGGTACAGAGCTGGAGCCCGGCGAGGCTaGCTCTCGCGCCGGCAGCACTCGGCCCCACCGCGCTGCACCGGG +
Preference number: 5 (lower is better)
Translates to: PKPARAGYRAGARRG*LSRRQHSAPPRCTG
Trigger: CCCGGTGCAGCGCGGTGGGGCCGAGTGCTGCCGGCGCGAGAGTCAGCCTCGCCGGGCTCCAGCTCTGTACCCGGCGCGTGCTGGCTTGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000595416.1
CDS CCA 90 bp CCCGTAGCCATCCTGTCCCAAGCCAGCACGCGCCGGGTACAGAGCTaGAGCCCGGCGAGGCTGACTCTCGCGCCGGCAGCACTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: PVAILSQASTRRVQS*SPARLTLAPAALGP
Trigger: GGGGCCGAGTGCTGCCGGCGCGAGAGTCAGCCTCGCCGGGCTCCAGCTCTGTACCCGGCGCGTGCTGGCTTGGGACAGGATGGCTACGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595416.1
CDS CCA 90 bp CCCCTCACCATCCTGTCCCAAGCCAGCACGCGCCGGGTACAGAGCTaGAGCCCGGCGAGGCTGACTCTCGCGCCGGCAGCACTCGGCCCC +
Preference number: 5 (lower is better)
Translates to: PLTILSQASTRRVQS*SPARLTLAPAALGP
Trigger: GGGGCCGAGTGCTGCCGGCGCGAGAGTCAGCCTCGCCGGGCTCCAGCTCTGTACCCGGCGCGTGCTGGCTTGGGACAGGATGGTGAGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS CCA 90 bp TGTGCATGGCAGGGGCCCCGGCCGCCAGGCCGCCATCATTGGCCTTaGCGGCCTCCCACGAGGCTGGGCCGTAGCTGTAGGTTGCGCCTG +
Preference number: 5 (lower is better)
Translates to: CAWQGPRPPGRHHWP*RPPTRLGRSCRLRL
Trigger: CAGGCGCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGCGGCCGGGGCCCCTGCCATGCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269701.7
ENST00000595416.1
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000681018.1
ENST00000681812.1
CDS CCA 90 bp GGCCGCCAGGCCGCCATCATTGGCCTTGGCGGCCTCCCACGAGGCTaGGCCGTAGCTGTAGGTTGCGCCTGTGGTGACACTGGTGTTCTG +
Preference number: 5 (lower is better)
Translates to: GRQAAIIGLGGLPRG*AVAVGCACGDTGVL
Trigger: CAGAACACCAGTGTCACCACAGGCGCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269701.7
ENST00000595416.1
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000681018.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTGGGCTCAAGCAATCCTCCCATCCCAGCTTCCCGAGTAGGGCTAGCCTTGGGTGCCAGGCCGCCATCATaGGCCTTGGCGGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: LGSSNPPIPASRVGLALGARPPS*ALAASH
Trigger: GTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGC...ACCCAAGGCTAGCCCTACTCGGGAAGCTGGGATGGGAGGATTGCTTGAGCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CAA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGGCCAGGCCGCCATCATaGGCCTTGGCGGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETARPPS*ALAASH
Trigger: GTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGC...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGGCCAGGCCGCCATCATaGGCCTTGGCGGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWEARPPS*ALAASH
Trigger: GTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGC...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCGCCAGGCCGCCATCATaGGCCTTGGCGGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVARPPS*ALAASH
Trigger: GTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGC...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AGCCGGCTCCCCGCTGCTCTCTGGAGCGGGCGCTCCTTCCCCATCTACGGCCCTCAATGTACTTCAGCTTaGAAACCTGGGCAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: SRLPAALWSGRSFPIYGPQCTSA*KPGQEA
Trigger: GGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTG...AGGGCCGTAGATGGGGAAGGAGCGCCCGCTCCAGAGAGCAGCGGGGAGCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCCGCCATCATTGGCCTaGGCGGCCTCCCACGAGGCT +
Preference number: 5 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHPPSLA*AASHEA
Trigger: AGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGG...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGAGGTCACCCGCCATCATTGGCCTaGGCGGCCTCCCACGAGGCT +
Preference number: 5 (lower is better)
Translates to: ALLRSLSKGRVGFLARGHPPSLA*AASHEA
Trigger: AGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGG...GTGACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CAA 90 bp GGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGCCGCCATCATTGGCCTaGGCGGCCTCCCACGAGGCT +
Preference number: 5 (lower is better)
Translates to: GTCIQNRQTEFCRLHGPAPPSLA*AASHEA
Trigger: AGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGG...CGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000681812.1
CDS-3UTR CAA 90 bp CAGCCAACCTGCGGTTGTGATTGTGGTCCACGGAGTGCAGGTGCCGCTGGAGGAATGAGGGAGTCGGAATaGTCGGTGCATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: QPTCGCDCGPRSAGAAGGMRESE*SVHGSG
Trigger: CCCAGAGCCATGCACCGACAATTCCGACTCCCTCAT...TCCTCCAGCGGCACCTGCACTCCGTGGACCACAATCACAACCGCAGGTTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000681812.1
CDS TCA 90 bp ACGAGCGTCCTGGCGGCCCCGTCTGAACTAGGGCCTCAGCAGGTCTaGCAGTCCTTGCTGGCCCGACCTCTATCTTCCACTCACAAAAAC +
Preference number: 5 (lower is better)
Translates to: TSVLAAPSELGPQQV*QSLLARPLSSTHKN
Trigger: GTTTTTGTGAGTGGAAGATAGAGGTCGGGCCAGCAAGGACTGTCAGACCTGCTGAGGCCCTAGTTCAGACGGGGCCGCCAGGACGCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000680199.1
CDS GCA 90 bp ATTGGCCTTGGCGGCCTCCCACGAGGCTGGGCCGTAGCTGTAGGTTaGGCCTGTGGTGACACTGGTGTTCTGGGCGCCATAGTAATTGTA +
Preference number: 5 (lower is better)
Translates to: IGLGGLPRGWAVAVG*ACGDTGVLGAIVIV
Trigger: TACAATTACTATGGCGCCCAGAACACCAGTGTCACCACAGGCGCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCCGCCAAGGCCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269701.7
ENST00000595416.1
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000681018.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGCTCCTTCTCTCCTCTTaGCCTCCCAGAGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: LGVRGCDAVSATCEPGAALLLSS*PPRVAE
Trigger: CTCTGCGACTCTGGGAGGCAAAGAGGAGAGAAGGAG...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
CDS GCA 90 bp AATAAAGCTGCTAAAAAGAGAAGCGAAGGCGGCCGGAAGGAACCTTaGGAGGGCTTACCCGATCCCGATCCCGCATCCGAGGCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: NKAAKKRSEGGRKEP*EGLPDPDPASEAAS
Trigger: GCTCGCAGCCTCGGATGCGGGATCGGGATCGGGTAAGCCCTCGCAAGGTTCCTTCCGGCCGCCTTCGCTTCTCTTTTTAGCAGCTTTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000680336.1
CDS GCA 90 bp CCCAGGGCACATCAGGTTTCCAGCTTTATACGAACACTCAGCATCTaGCCCTCACCATCCTGTCCCAAGCCAGCACGCGCCGGGTACAGA +
Preference number: 5 (lower is better)
Translates to: PRAHQVSSFIRTLSI*PSPSCPKPARAGYR
Trigger: TCTGTACCCGGCGCGTGCTGGCTTGGGACAGGATGGTGAGGGGCAGATGCTGAGTGTTCGTATAAAGCTGGAAACCTGATGTGCCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS-3UTR CAA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTATGAAGGTGCCAGGGTaGCTCCGGTCCTGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRMKVPG*LRSWKR
Trigger: CCGCTTCCAGGACCGGAGCAACCCTGGCACCTTCAT...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGGCCTCACTTCTGGCCTaGGGGACGCCCTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETASLLA*GTPFSC
Trigger: ACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGGC...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGCCTCACTTCTGGCCTaGGGGACGCCCTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: FWPLGVRGCDAVSATCEPASLLA*GTPFSC
Trigger: ACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGGC...TGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS GCA 90 bp GCCACCGTGCCCGGCCTCGTGCCACGTTTTACGGGTCCTGTCACATaGCTTACTACCATCCAGGAAAGCACTCATCCTGGGATGACAACT +
Preference number: 5 (lower is better)
Translates to: ATVPGLVPRFTGPVT*LTTIQESTHPGMTT
Trigger: AGTTGTCATCCCAGGATGAGTGCTTTCCTGGATGGTAGTAAGGCATGTGACAGGACCCGTAAAACGTGGCACGAGGCCGGGCACGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537303.5
CDS GCA 90 bp CGAGCTCCACCCAGCATGTCCCAACTATCCCCTGTGGGCAAACTTTaGTCCCAAAAGGCTCTGATTCCAGAAGCAGGGAGCAGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RAPPSMSQLSPVGKL*SQKALIPEAGSRQL
Trigger: GAGCTGCCTGCTCCCTGCTTCTGGAATCAGAGCCTTTTGGGAGCAAAGTTTGCCCACAGGGGATAGTTGGGACATGCTGGGTGGAGCTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS-3UTR CAA 90 bp CCAACATGTGAGATGTACAGTTCAAAAGGCCACAGGGAAACTGACACAGCAGGGCCGCCATCATTGGCCTaGGCGGCCTCCCACGAGGCT +
Preference number: 5 (lower is better)
Translates to: PTCEMYSSKGHRETDTAGPPSLA*AASHEA
Trigger: AGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGG...CCCTGCTGTGTCAGTTTCCCTGTGGCCTTTTGAACTGTACATCTCACATGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTGCCAGGCCGCCATCATaGGCCTTGGCGGCCTCCCAC +
Preference number: 5 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSARPPS*ALAASH
Trigger: GTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGC...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGATGAGGGAGTCGGAATaGTCGGTGCATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: DTSGLWECVDVTRSVPHVMRESE*SVHGSG
Trigger: CCCAGAGCCATGCACCGACAATTCCGACTCCCTCAT...CACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CGGCGTGCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGAATGAGGGAGTCGGAATaGTCGGTGCATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RRALLRSLSKGRVGFLARMRESE*SVHGSG
Trigger: CCCAGAGCCATGCACCGACAATTCCGACTCCCTCAT...TCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGCACGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CAA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTCCTTCTCTCCTCTTaGCCTCCCAGAGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETLLLSS*PPRVAE
Trigger: CTCTGCGACTCTGGGAGGCAAAGAGGAGAGAAGGAG...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
CDS TCA 90 bp CGGCCTCCCACGAGGCTGGGCCGTAGCTGTAGGTTGCGCCTGTGGTaGCACTGGTGTTCTGGGCGCCATAGTAATTGTAGTTTTCATAAC +
Preference number: 5 (lower is better)
Translates to: RPPTRLGRSCRLRLW*HWCSGRHSNCSFHN
Trigger: GTTATGAAAACTACAATTACTATGGCGCCCAGAACACCAGTGTCACCACAGGCGCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000269701.7
ENST00000595416.1
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000681018.1
ENST00000681812.1
CDS CCA 90 bp CGCGCACGCTGCCGCCTCAGGACCGAAACCTCTCTCTGCAATTTCTaGTGCTGGGATACTTTTGCCCTGCCACTTCTCAAGATCGACAAC +
Preference number: 5 (lower is better)
Translates to: RARCRLRTETSLCNF*CWDTFALPLLKIDN
Trigger: GTTGTCGATCTTGAGAAGTGGCAGGGCAAAAGTATCCCAGCACCAGAAATTGCAGAGAGAGGTTTCGGTCCTGAGGCGGCAGCGTGCGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS-3UTR CAA 90 bp CTCGTCCTCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGATGTCCAAACGCTGGTaGATCTTGGCAATGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LVLLLSPDASPETVPRRWMSKRW*ILAMRE
Trigger: CTCCCTCATTGCCAAGATCAACCAGCGTTTGGACAT...CCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGAGGACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CAA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGATGAAGGTGCCAGGGTaGCTCCGGTCCTGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLEMKVPG*LRSWKR
Trigger: CCGCTTCCAGGACCGGAGCAACCCTGGCACCTTCAT...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: GTCIQNRQTEFCRLHGPAVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...CGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TCCTTCTCTCCCCTGATGCCAGTCCCGAGACTGTCCCACGAAGATGGCGACCGGTCCTGGCCAATCCCTTaGAAAGGATCTGGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: SFSPLMPVPRLSHEDGDRSWPIP*KGSGFG
Trigger: ACCAAAACCAGATCCTTTCAAAGGGATTGGCCAGGA...CCGGTCGCCATCTTCGTGGGACAGTCTCGGGACTGGCATCAGGGGAGAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CAA 90 bp CTTCTGGCCTTGGGGACGCCCTTCTCATGTGCCGTTCCACAGGGCACCTGCTCTCAATGTACTTCAGCTTaGAAACCTGGGCAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LLALGTPFSCAVPQGTCSQCTSA*KPGQEA
Trigger: GGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTG...AGAGCAGGTGCCCTGTGGAACGGCACATGAGAAGGGCGTCCCCAAGGCCAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp ACAGTCTGGTTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCTGCACAGTCTGGTTCTaGAGGTTGCGGTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: TVWFLRLRWVCFQWRRSVCTVWF*RLRWVC
Trigger: ACACACCCACCGCAACCTCAAGAACCAGACTGTGCA...GACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAACCAGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTGCACAGTCTGGTTCTaGAGGTTGCGGTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: QNRQTEFCRLHGPASCLFCTVWF*RLRWVC
Trigger: ACACACCCACCGCAACCTCAAGAACCAGACTGTGCA...GAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTGCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCGGAAGCGGAAGGAGCTaGCCAGCTGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: LLTNQGRKTNASIIPTPSGSGRS*PAGHTS
Trigger: ACTGGTGTGGCCAGCTGGCAAGCTCCTTCCGCTTCC...GGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000680461.1
CDS TCA 90 bp CCCTTGGGTGTTTTTAGCTCACTCAACTCCTACAGAGCACTAGGCTaGGAGGCTGAGCACAAGCAAGCCCTCTATCCCGGGCAAGGCCAA +
Preference number: 5 (lower is better)
Translates to: PLGVFSSLNSYRALG*EAEHKQALYPGQGQ
Trigger: TTGGCCTTGCCCGGGATAGAGGGCTTGCTTGTGCTCAGCCTCTCAGCCTAGTGCTCTGTAGGAGTTGAGTGAGCTAAAAACACCCAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS-3UTR CAA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCTATGCACCCTGGGTGTaGGCAGGTCCAGCACTCCAC +
Preference number: 5 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPYAPWV*AGPALH
Trigger: GTGGAGTGCTGGACCTGCCAACACCCAGGGTGCATA...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp ACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGGAGGAGCAACTCTGGTTaGGGCACTTTCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TKGERPTHPSSQRLPWNRRSNSG*GTFCLC
Trigger: GCAGAGGCAGAAAGTGCCCAAACCAGAGTTGCTCCT...CCTGTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGAGGAGCAACTCTGGTTaGGGCACTTTCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: GTCIQNRQTEFCRLHGPARSNSG*GTFCLC
Trigger: GCAGAGGCAGAAAGTGCCCAAACCAGAGTTGCTCCT...CGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAAAGGAGCAACTCTGGTTaGGGCACTTTCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: YFWPLGVRGCDAVSATCERSNSG*GTFCLC
Trigger: GCAGAGGCAGAAAGTGCCCAAACCAGAGTTGCTCCT...TTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTAGACTCTGCATCAGTTaGTTCCACTTCAGCATCCGC +
Preference number: 5 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGRLCIS*FHFSIR
Trigger: GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCT...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTCCTGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 5 (lower is better)
Translates to: NRQTEFCRLHGPASCLFSWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...GGAGAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGTGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 5 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGAC +
Preference number: 5 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETRYFWP*GVRGCD
Trigger: GTCACATCCACGCACTCCCAAAGGCCAGAAGTATCT...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTGTCTGGTTCTTGAGGTaGCGGTGGGTGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRVWFLR*RWVCFQ
Trigger: CTGGAAACACACCCACCGCAACCTCAAGAACCAGAC...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGGTAGTTTTCATAACCTaGCCAGCTGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: GGCVSSGVGRSDTSGLWEVVFIT*PAGHTS
Trigger: ACTGGTGTGGCCAGCTGGCAAGGTTATGAAAACTAC...CTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTCCGTAGTTTTCATAACCTaGCCAGCTGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: NRQTEFCRLHGPASCLFSVVFIT*PAGHTS
Trigger: ACTGGTGTGGCCAGCTGGCAAGGTTATGAAAACTAC...GGAGAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000681812.1
CDS-3UTR CAA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGCCGCCATCATTGGCCTaGGCGGCCTCCCACGAGGCT +
Preference number: 5 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQPPSLA*AASHEA
Trigger: AGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGG...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTGCACTACATGAGGGAGTCGGAATaGTCGGTGCATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: VNQVLRSPVKVTHHMVHYMRESE*SVHGSG
Trigger: CCCAGAGCCATGCACCGACAATTCCGACTCCCTCAT...GTAGTGCACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GATACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGTGGCTCCTCGTAAAGTaGGAACTGCTTCCGTTTCCT +
Preference number: 5 (lower is better)
Translates to: DTSGLWECVDVTRSVPHVWLLVK*ELLPFP
Trigger: AGGAAACGGAAGCAGTTCCAACTTTACGAGGAGCCA...CACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTTCCTGGCCAATCCCTTaGAAAGGATCTGGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: WPLGVRGCDAVSATCEPGSWPIP*KGSGFG
Trigger: ACCAAAACCAGATCCTTTCAAAGGGATTGGCCAGGA...ACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTAGGAGCAACTCTGGTTaGGGCACTTTCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: ELAYRTGKLNSVGCTVPRRSNSG*GTFCLC
Trigger: GCAGAGGCAGAAAGTGCCCAAACCAGAGTTGCTCCT...ACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TGTGGGAACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGTAGCAGGACCTCTTaGCCTCCCAGAGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: CGNSVFRLCISLFHFSIRGSRTS*PPRVAE
Trigger: CTCTGCGACTCTGGGAGGCAAAGAGGTCCTGCTACC...GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000598597.7
CDS-3UTR CAA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCCAGACAAGTCCCTCTTaGCCTCCCAGAGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSQTSPS*PPRVAE
Trigger: CTCTGCGACTCTGGGAGGCAAAGAGGGACTTGTCTG...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681812.1
CDS GCA 90 bp TCCATATGCACCTTAGGGGAAACAGAAACACACAAGAGCCCTGTTTaGAGAACGAAGGCACTGACACCCCAGCTGTCACCTTGCTCCACC +
Preference number: 5 (lower is better)
Translates to: SICTLGETETHKSPV*RTKALTPQLSPCST
Trigger: GGTGGAGCAAGGTGACAGCTGGGGTGTCAGTGCCTTCGTTCTGCAAACAGGGCTCTTGTGTGTTTCTGTTTCCCCTAAGGTGCATATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS-3UTR CAA 90 bp GCGCTGCTCAGAAGCCTCTCAAAAGGGCGTGTGGGATTTTTGGCAAGAGGTCACGTAGTTTTCATAACCTaGCCAGCTGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: ALLRSLSKGRVGFLARGHVVFIT*PAGHTS
Trigger: ACTGGTGTGGCCAGCTGGCAAGGTTATGAAAACTAC...GTGACCTCTTGCCAAAAATCCCACACGCCCTTTTGAGAGGCTTCTGAGCAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000599883.2
CDS-3UTR CAA 90 bp GTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCTGGCCTTTGGGAGTGCGTATGTCCAAACGCTGGTaGATCTTGGCAATGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VCFQWRRSVRYFWPLGVRMSKRW*ILAMRE
Trigger: CTCCCTCATTGCCAAGATCAACCAGCGTTTGGACAT...ACGCACTCCCAAAGGCCAGAAGTATCTGACCGACCTACGCCACTGGAAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGCTGGGTTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: HDCMRQAVRGTAQEETLGSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...ACCCAGCGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTAGGAGCAACTCTGGTTaGGGCACTTTCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPRSNSG*GTFCLC
Trigger: GCAGAGGCAGAAAGTGCCCAAACCAGAGTTGCTCCT...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACCATATGGTGCACTACGTCTGGTTCTTGAGGTaGCGGTGGGTGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: VNQVLRSPVKVTHHMVHYVWFLR*RWVCFQ
Trigger: CTGGAAACACACCCACCGCAACCTCAAGAACCAGAC...GTAGTGCACCATATGGTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CAGCAAGGACTAAAGATTGGGACGCAATGCCCTCTGCACAGTCTGGTTCTTGAGTGCACAGTCTGGTTCTaGAGGTTGCGGTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: QQGLKIGTQCPLHSLVLECTVWF*RLRWVC
Trigger: ACACACCCACCGCAACCTCAAGAACCAGACTGTGCA...CTCAAGAACCAGACTGTGCAGAGGGCATTGCGTCCCAATCTTTAGTCCTTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TACGCACTGATTAATCAAGCAGCGCCACATCCCCAGAGTCCCCAGGCAAGCACTTCCTGTCTGTGGTACTaGCAAGCACAAACCTTGAGG +
Preference number: 5 (lower is better)
Translates to: YALINQAAPHPQSPQASTSCLWY*QAQTLR
Trigger: CCTCAAGGTTTGTGCTTGCAAGTACCACAGACAGGA...AGTGCTTGCCTGGGGACTCTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS GCA 90 bp ACTTTTGCCCTGCCACTTCTCAAGATCGACAACTTCTCGAGCTCCTaGAGCCAGGATCAGACCACTAGCTTCTCTACAACCAGTCGAGCT +
Preference number: 5 (lower is better)
Translates to: TFALPLLKIDNFSSS*SQDQTTSFSTTSRA
Trigger: AGCTCGACTGGTTGTAGAGAAGCTAGTGGTCTGATCCTGGCTGCAGGAGCTCGAGAAGTTGTCGATCTTGAGAAGTGGCAGGGCAAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS GCA 90 bp CAGGACCGAAACCTCTCTCTGCAATTTCTGGTGCTGGGATACTTTTaGCCTGCCACTTCTCAAGATCGACAACTTCTCGAGCTCCTGCAG +
Preference number: 5 (lower is better)
Translates to: QDRNLSLQFLVLGYF*PATSQDRQLLELLQ
Trigger: CTGCAGGAGCTCGAGAAGTTGTCGATCTTGAGAAGTGGCAGGGCAAAAGTATCCCAGCACCAGAAATTGCAGAGAGAGGTTTCGGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS-3UTR CAA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCTATGCACCCTGGGTGTaGGCAGGTCCAGCACTCCAC +
Preference number: 5 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFYAPWV*AGPALH
Trigger: GTGGAGTGCTGGACCTGCCAACACCCAGGGTGCATA...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AAGCCACACGACTGCATGAGACAAGCCGTGAGAGGCACTGCTCAGGAGGAAACGTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: KPHDCMRQAVRGTAQEETSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...CGTTTCCTCCTGAGCAGTGCCTCTCACGGCTTGTCTCATGCAGTCGTGTGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TACTTCTGGCCTTTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAAAAAGGGTCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: YFWPLGVRGCDAVSATCEKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT...TTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAAAGGCCAGAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACAGACTCTGCATCAGTTaGTTCCACTTCAGCATCCGC +
Preference number: 5 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNRLCIS*FHFSIR
Trigger: GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCT...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTTGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 5 (lower is better)
Translates to: AYKPREKDQRIHHPNAFPWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...AGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AACAGCGTCTTTAGACTCTGCATCAGTTTGTTCCACTTCAGCATCCGCGGCAGCATGTCCAAACGCTGGTaGATCTTGGCAATGAGGGAG +
Preference number: 5 (lower is better)
Translates to: NSVFRLCISLFHFSIRGSMSKRW*ILAMRE
Trigger: CTCCCTCATTGCCAAGATCAACCAGCGTTTGGACAT...GCTGCCGCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCTAAAGACGCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000598597.7
ENST00000681812.1
CDS-3UTR CAA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCATGAAGGTGCCAGGGTaGCTCCGGTCCTGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTMKVPG*LRSWKR
Trigger: CCGCTTCCAGGACCGGAGCAACCCTGGCACCTTCAT...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTGCTTACAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCTGGCTCCTCGTAAAGTaGGAACTGCTTCCGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LLTNQGRKTNASIIPTPSWLLVK*ELLPFP
Trigger: AGGAAACGGAAGCAGTTCCAACTTTACGAGGAGCCA...GGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTGTAAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CGGTCAGTGCCACATGTGAACCAGGTGCTGCGAAGTCCTGTGAAAGTCACACACTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: RSVPHVNQVLRSPVKVTHSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...GTGTGTGACTTTCACAGGACTTCGCAGCACCTGGTTCACATGTGGCACTGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTCATTAGAAATCCCAGTTGTCATGTTCCTGAGCTTGATGCATTCCAGTGTCCCGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: LIRNPSCHVPELDAFQCPVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...GGGACACTGGAATGCATCAAGCTCAGGAACATGACAACTGGGATTTCTAATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CAA 90 bp CAAACCAAGGGAGAAAGACCAACGCATCCATCATCCCAACGCCTTCCCTGGAACTCCTGGCCAATCCCTTaGAAAGGATCTGGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: QTKGERPTHPSSQRLPWNSWPIP*KGSGFG
Trigger: ACCAAAACCAGATCCTTTCAAAGGGATTGGCCAGGA...GTTCCAGGGAAGGCGTTGGGATGATGGATGCGTTGGTCTTTCTCCCTTGGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TTGGGAGTGCGTGGATGTGACGCGGTCAGTGCCACATGTGAACCAGGTGCTGCGTTCACTATATGTCTGTaGTTCAAAACACTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: LGVRGCDAVSATCEPGAAFTICL*FKTLLA
Trigger: GGCTAAGAGTGTTTTGAACAACAGACATATAGTGAA...CGCAGCACCTGGTTCACATGTGGCACTGACCGCGTCACATCCACGCACTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TTCTTGAGGTTGCGGTGGGTGTGTTTCCAGTGGCGTAGGTCGGTCAGATACTTCAAAGGGTCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: FLRLRWVCFQWRRSVRYFKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT...GAAGTATCTGACCGACCTACGCCACTGGAAACACACCCACCGCAACCTCAAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTCTCTTCACCAAAATTAGATTACAGCATATTCTGGGAGCACACGCCCTTGTACGCCTCACTTCTGGCCTaGGGGACGCCCTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: VSSPKLDYSIFWEHTPLYASLLA*GTPFSC
Trigger: ACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGGC...GTACAAGGGCGTGTGCTCCCAGAATATGCTGTAATCTAATTTTGGTGAAGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCAGACTCTGCATCAGTTaGTTCCACTTCAGCATCCGC +
Preference number: 5 (lower is better)
Translates to: YGTCIQNRQTEFCRLHGPRLCIS*FHFSIR
Trigger: GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCT...GGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGTTGTCTGGTTCTTGAGGTaGCGGTGGGTGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: ARQIFYSLLSNDFPVASVVWFLR*RWVCFQ
Trigger: CTGGAAACACACCCACCGCAACCTCAAGAACCAGAC...AACGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGTATGCACCCTGGGTGTaGGCAGGTCCAGCACTCCAC +
Preference number: 5 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKYAPWV*AGPALH
Trigger: GTGGAGTGCTGGACCTGCCAACACCCAGGGTGCATA...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTTCGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTTATGCACCCTGGGTGTaGGCAGGTCCAGCACTCCAC +
Preference number: 5 (lower is better)
Translates to: LRHQSYGTCIQNRQTEFCYAPWV*AGPALH
Trigger: GTGGAGTGCTGGACCTGCCAACACCCAGGGTGCATA...ACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GAAATTCTGTTGCGTGCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTATGAGGGAGTCGGAATaGTCGGTGCATGGCTCTGGG +
Preference number: 5 (lower is better)
Translates to: EILLRANLEHMLASLSQIMRESE*SVHGSG
Trigger: CCCAGAGCCATGCACCGACAATTCCGACTCCCTCAT...AATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGCACGCAACAGAATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCATGAAGGTGCCAGGGTaGCTCCGGTCCTGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSMKVPG*LRSWKR
Trigger: CCGCTTCCAGGACCGGAGCAACCCTGGCACCTTCAT...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AATGCTAAATGCTGCACTCTGGATTCAACTCCCTGCTCCTGGGGTTCATCTTCCTGGCTCCTCGTAAAGTaGGAACTGCTTCCGTTTCCT +
Preference number: 5 (lower is better)
Translates to: NAKCCTLDSTPCSWGSSSWLLVK*ELLPFP
Trigger: AGGAAACGGAAGCAGTTCCAACTTTACGAGGAGCCA...GGAAGATGAACCCCAGGAGCAGGGAGTTGAATCCAGAGTGCAGCATTTAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CAA 90 bp ATGCTGAGCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCTCCTTCTCTCCTCTTaGCCTCCCAGAGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: MLSRNDPEAPSSFQAVYFLLLSS*PPRVAE
Trigger: CTCTGCGACTCTGGGAGGCAAAGAGGAGAGAAGGAG...GAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGCTCAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
CDS-3UTR CAA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGAC +
Preference number: 5 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSRYFWP*GVRGCD
Trigger: GTCACATCCACGCACTCCCAAAGGCCAGAAGTATCT...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTATGTCCAAACGCTGGTaGATCTTGGCAATGAGGGAG +
Preference number: 5 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSMSKRW*ILAMRE
Trigger: CTCCCTCATTGCCAAGATCAACCAGCGTTTGGACAT...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTATGAAGGTGCCAGGGTaGCTCCGGTCCTGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: LASTNLEVFFQHLHYMSVMKVPG*LRSWKR
Trigger: CCGCTTCCAGGACCGGAGCAACCCTGGCACCTTCAT...AACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CAA 90 bp CAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTCCTGTCTCTTCTTCACTATATGTCTGTaGTTCAAAACACTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: QNRQTEFCRLHGPASCLFFTICL*FKTLLA
Trigger: GGCTAAGAGTGTTTTGAACAACAGACATATAGTGAA...GAAGAGACAGGACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAGACTCTGCATCAGTTaGTTCCACTTCAGCATCCGC +
Preference number: 5 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSRLCIS*FHFSIR
Trigger: GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCT...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGGCCAGCGCAATGTACTTCAGCTTaGAAACCTGGGCAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RLGKYSTASFLMISQWPAQCTSA*KPGQEA
Trigger: GGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTG...CGCTGGCCACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TTTTTCATAAATATTCACCTGGAATCTCCACTAAGGCTCCTCATGAGCAGGGCCGTCTGGTTCTTGAGGTaGCGGTGGGTGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: FFINIHLESPLRLLMSRAVWFLR*RWVCFQ
Trigger: CTGGAAACACACCCACCGCAACCTCAAGAACCAGAC...GGCCCTGCTCATGAGGAGCCTTAGTGGAGATTCCAGGTGAATATTTATGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGTGCACAGTCTGGTTCTaGAGGTTGCGGTGGGTGTGT +
Preference number: 5 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVCTVWF*RLRWVC
Trigger: ACACACCCACCGCAACCTCAAGAACCAGACTGTGCA...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCGTAGTTTTCATAACCTaGCCAGCTGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFVVFIT*PAGHTS
Trigger: ACTGGTGTGGCCAGCTGGCAAGGTTATGAAAACTAC...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCTGGCTCCTCGTAAAGTaGGAACTGCTTCCGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFWLLVK*ELLPFP
Trigger: AGGAAACGGAAGCAGTTCCAACTTTACGAGGAGCCA...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTTAGCCCCTGGTATACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAAAGGGTCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: VSPWYTVEARQIFYSLLSKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT...AGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGTATACCAGGGGCTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTGGTAGCAGGACCTCTTaGCCTCCCAGAGTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: LASTNLEVFFQHLHYMSVGSRTS*PPRVAE
Trigger: CTCTGCGACTCTGGGAGGCAAAGAGGTCCTGCTACC...AACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS GCA 90 bp ATTGTAGTTTTCATAACCTTGCCAGCTGGCCACACCAGTTCCATATaGACCTTAGGGGAAACAGAAACACACAAGAGCCCTGTTTGCAGA +
Preference number: 5 (lower is better)
Translates to: IVVFITLPAGHTSSI*TLGETETHKSPVCR
Trigger: TCTGCAAACAGGGCTCTTGTGTGTTTCTGTTTCCCCTAAGGTGCATATGGAACTGGTGTGGCCAGCTGGCAAGGTTATGAAAACTACAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS-3UTR CAA 90 bp AGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCAGTTCTAATGTTGTATGCACCCTGGGTGTaGGCAGGTCCAGCACTCCAC +
Preference number: 5 (lower is better)
Translates to: RGTIVFSSSLFPFSVLMLYAPWV*AGPALH
Trigger: GTGGAGTGCTGGACCTGCCAACACCCAGGGTGCATA...CAACATTAGAACTGAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TTCATGGTAAAAATCCATTACGCACTGATTAATCAAGCAGCGCCACATCCCCAGGTAGTTTTCATAACCTaGCCAGCTGGCCACACCAGT +
Preference number: 5 (lower is better)
Translates to: FMVKIHYALINQAAPHPQVVFIT*PAGHTS
Trigger: ACTGGTGTGGCCAGCTGGCAAGGTTATGAAAACTAC...CTGGGGATGTGGCGCTGCTTGATTAATCAGTGCGTAATGGATTTTTACCATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CAA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAATGAAGGTGCCAGGGTaGCTCCGGTCCTGGAAGCGG +
Preference number: 5 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSMKVPG*LRSWKR
Trigger: CCGCTTCCAGGACCGGAGCAACCCTGGCACCTTCAT...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTTGGCTCCTCGTAAAGTaGGAACTGCTTCCGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PNLYYSKCTTVKRHVTAAWLLVK*ELLPFP
Trigger: AGGAAACGGAAGCAGTTCCAACTTTACGAGGAGCCA...AGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCTCCTGGCCAATCCCTTaGAAAGGATCTGGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFSWPIP*KGSGFG
Trigger: ACCAAAACCAGATCCTTTCAAAGGGATTGGCCAGGA...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGTCCTGGCCAATCCCTTaGAAAGGATCTGGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRSWPIP*KGSGFG
Trigger: ACCAAAACCAGATCCTTTCAAAGGGATTGGCCAGGA...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGCTGCACGGTCCCGCGTTTCACTATATGTCTGTaGTTCAAAACACTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: ELAYRTGKLNSVGCTVPRFTICL*FKTLLA
Trigger: GGCTAAGAGTGTTTTGAACAACAGACATATAGTGAA...ACGCGGGACCGTGCAGCCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CCAAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAAAGGGTCCTCACCCTaGAGGTATTTTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: PSALLSRDMLQPLRTMYFKGSSP*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGGTGAGGACCCTTT...GAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCTGGGAGCACACGCCCTaGTACTGCTTACAAACCAAG +
Preference number: 5 (lower is better)
Translates to: AEMTQRHHRLFKQFISIFWEHTP*YCLQTK
Trigger: CTTGGTTTGTAAGCAGTACAAGGGCGTGTGCTCCCA...GAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCAAGCACTGACTCATTAGAAATCCCAGTTGTCATGTTCCTGAGCTTGATGCATGTCATGTTCCTGAGCTaGATGCATTCCAGTGTCCCT +
Preference number: 5 (lower is better)
Translates to: ASTDSLEIPVVMFLSLMHVMFLS*MHSSVP
Trigger: AGGGACACTGGAATGCATCAAGCTCAGGAACATGAC...ATGCATCAAGCTCAGGAACATGACAACTGGGATTTCTAATGAGTCAGTGCTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CAA 90 bp GCAGAAATGACCCAGAGGCACCATCGTCTTTTCAAGCAGTTTATTTCCATTTTCATGTCCAAACGCTGGTaGATCTTGGCAATGAGGGAG +
Preference number: 5 (lower is better)
Translates to: AEMTQRHHRLFKQFISIFMSKRW*ILAMRE
Trigger: CTCCCTCATTGCCAAGATCAACCAGCGTTTGGACAT...GAAAATGGAAATAAACTGCTTGAAAAGACGATGGTGCCTCTGGGTCATTTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269701.7
ENST00000680245.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000598597.7
ENST00000599883.2
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CCTTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAGTCTTGTCGGGCAGCTaGGTGCTTATGAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: PSIYGNLCWIIPPMAITSVLSGS*VLMNRR
Trigger: CCTGCGGTTCATAAGCACCAAGCTGCCCGACAAGAC...TGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTTTTCTGCCTCACTTCTGGCCTaGGGGACGCCCTTCTCATGT +
Preference number: 5 (lower is better)
Translates to: LWQFMLDYSTYGNHIKFSASLLA*GTPFSC
Trigger: ACATGAGAAGGGCGTCCCCAAGGCCAGAAGTGAGGC...AGAAAACTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGAGACTCTGCATCAGTTaGTTCCACTTCAGCATCCGC +
Preference number: 5 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKRLCIS*FHFSIR
Trigger: GCGGATGCTGAAGTGGAACAAACTGATGCAGAGTCT...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp ATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGACATGTTACAGCAGATACTTCTGGCCTTaGGGAGTGCGTGGATGTGAC +
Preference number: 5 (lower is better)
Translates to: ITQPLLFQVHYCQETCYSRYFWP*GVRGCD
Trigger: GTCACATCCACGCACTCCCAAAGGCCAGAAGTATCT...GCTGTAACATGTCTCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp ACAGTAGAGGCTCGGCAAATATTCTACAGCCTCCTTTCTAATGATTTCCCAGTGTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: TVEARQIFYSLLSNDFPVSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...CACTGGGAAATCATTAGAAAGGAGGCTGTAGAATATTTGCCGAGCCTCTACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCCAATGTACTTCAGCTTaGAAACCTGGGCAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTQCTSA*KPGQEA
Trigger: GGCTTCTTGCCCAGGTTTCAAAGCTGAAGTACATTG...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CGTCATCAAAGCTACGGAACTTGCATACAGAACAGGCAAACTGAATTCTGTCGGGGTTCATCTTCCCTTTaGAAAGCTTTTCCTGTCTGT +
Preference number: 5 (lower is better)
Translates to: RHQSYGTCIQNRQTEFCRGSSSL*KAFPVC
Trigger: ACAGACAGGAAAAGCTTTCAAAAGGGAAGATGAACC...CCGACAGAATTCAGTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGATGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CAA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGTCAAAGCTACGGAACTaGCATACAGAACAGGCAAAC +
Preference number: 5 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKSKLRN*HTEQAN
Trigger: GTTTGCCTGTTCTGTATGCAAGTTCCGTAGCTTTGA...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCAAGAGTCTGGTTCTTGAGGTaGCGGTGGGTGTGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: SSRYNHPTFIIPSALLSRVWFLR*RWVCFQ
Trigger: CTGGAAACACACCCACCGCAACCTCAAGAACCAGAC...TCTTGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GTATCATCAAGATATAATCACCCAACCTTTATTATTCCAAGTGCACTACTGTCATGGCTCCTCGTAAAGTaGGAACTGCTTCCGTTTCCT +
Preference number: 5 (lower is better)
Translates to: VSSRYNHPTFIIPSALLSWLLVK*ELLPFP
Trigger: AGGAAACGGAAGCAGTTCCAACTTTACGAGGAGCCA...TGACAGTAGTGCACTTGGAATAATAAAGGTTGGGTGATTATATCTTGATGATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AAGTGCACTACTGTCAAGAGACATGTTACAGCCGCTAAGGACAATGTACTTCAGTTCACTATATGTCTGTaGTTCAAAACACTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: KCTTVKRHVTAAKDNVLQFTICL*FKTLLA
Trigger: GGCTAAGAGTGTTTTGAACAACAGACATATAGTGAA...CTGAAGTACATTGTCCTTAGCGGCTGTAACATGTCTCTTGACAGTAGTGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp TTCTATCTATGGCAATTTATGTTGGATTATTCCACCTATGGCAATCACATCAAGTCCTGGCCAATCCCTTaGAAAGGATCTGGTTTTGGT +
Preference number: 5 (lower is better)
Translates to: FYLWQFMLDYSTYGNHIKSWPIP*KGSGFG
Trigger: ACCAAAACCAGATCCTTTCAAAGGGATTGGCCAGGA...CTTGATGTGATTGCCATAGGTGGAATAATCCAACATAAATTGCCATAGATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp AGGGGAGGATCTTCCAATTCTTCTGATTTTAGGAAATTCTGTTGCGTGCTAACCTTCACTATATGTCTGTaGTTCAAAACACTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: RGGSSNSSDFRKFCCVLTFTICL*FKTLLA
Trigger: GGCTAAGAGTGTTTTGAACAACAGACATATAGTGAA...GGTTAGCACGCAACAGAATTTCCTAAAATCAGAAGAATTGGAAGATCCTCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp GCTAACCTTGAACACATGCTAGCCTCCCTTTCTCAGATTTGGAAAGATCTAAAGTTCACTATATGTCTGTaGTTCAAAACACTCTTAGCC +
Preference number: 5 (lower is better)
Translates to: ANLEHMLASLSQIWKDLKFTICL*FKTLLA
Trigger: GGCTAAGAGTGTTTTGAACAACAGACATATAGTGAA...CTTTAGATCTTTCCAAATCTGAGAAAGGGAGGCTAGCATGTGTTCAAGGTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269701.7
ENST00000598597.7
ENST00000680245.1
ENST00000680461.1
ENST00000681812.1
CDS-3UTR CAA 90 bp CTTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTTTGCAAGCACAAACCTaGAGGTATTTTTCCAGCATC +
Preference number: 5 (lower is better)
Translates to: LASTNLEVFFQHLHYMSVLQAQT*RYFSSI
Trigger: GATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAA...AACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS-3UTR CAA 90 bp CTTGCAAGCACAAACCTTGAGGTATTTTTCCAGCATCTTCACTATATGTCTGTTTCACCTAACCATCATTaGCTCAGAATTTTAAGGCTA +
Preference number: 5 (lower is better)
Translates to: LASTNLEVFFQHLHYMSVSPNHH*LRILRL
Trigger: TAGCCTTAAAATTCTGAGCAAATGATGGTTAGGTGA...AACAGACATATAGTGAAGATGCTGGAAAAATACCTCAAGGTTTGTGCTTGCAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000599883.2
CDS CCA 72 bp GCATGGCAGGGGCCCCGGCCGCCAGGCCGCCATCATTaGCCTTGGCGGCCTCCCACGAGGCTGGGCCGTAGC +
Preference number: 6 (lower is better)
Translates to: AWQGPRPPGRHH*PWRPPTRLGRS
Trigger: GCTACGGCCCAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGCGGCCGGGGCCCCTGCCATGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269701.7
ENST00000595416.1
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000681018.1
ENST00000681812.1
CDS CCA 72 bp CAGGGGCCCCGGCCGCCAGGCCGCCATCATTGGCCTTaGCGGCCTCCCACGAGGCTGGGCCGTAGCTGTAGG +
Preference number: 6 (lower is better)
Translates to: QGPRPPGRHHWP*RPPTRLGRSCR
Trigger: CCTACAGCTACGGCCCAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGGCCTGGCGGCCGGGGCCCCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000269701.7
ENST00000595416.1
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000681018.1
ENST00000681812.1
CDS CCA 72 bp AAGGTGCCAGGGTTGCTCCGGTCCTGGAAGCGGCCCTaGCCCCGGCCCCGCATGAAGCCATCAAGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: KVPGLLRSWKRP*PRPRMKPSREP
Trigger: GGGCTCCCTTGATGGCTTCATGCGGGGCCGGGGCCAGGGCCGCTTCCAGGACCGGAGCAACCCTGGCACCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000269701.7
ENST00000537303.5
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000680461.1
ENST00000681018.1
ENST00000681812.1
CDS CCA 72 bp ATCCTGTCCCAAGCCAGCACGCGCCGGGTACAGAGCTaGAGCCCGGCGAGGCTGACTCTCGCGCCGGCAGCA +
Preference number: 6 (lower is better)
Translates to: ILSQASTRRVQS*SPARLTLAPAA
Trigger: TGCTGCCGGCGCGAGAGTCAGCCTCGCCGGGCTCCAGCTCTGTACCCGGCGCGTGCTGGCTTGGGACAGGAT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000595416.1
ENST00000681018.1
CDS CCA 72 bp GCCGCCATCATTGGCCTTGGCGGCCTCCCACGAGGCTaGGCCGTAGCTGTAGGTTGCGCCTGTGGTGACACT +
Preference number: 6 (lower is better)
Translates to: AAIIGLGGLPRG*AVAVGCACGDT
Trigger: AGTGTCACCACAGGCGCAACCTACAGCTACGGCCCAGCCTCGTGGGAGGCCGCCAAGGCCAATGATGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269701.7
ENST00000595416.1
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000681018.1
ENST00000681812.1
CDS CCA 72 bp TGGGGCGGTAGGGGTTGTGCTCCGGCAGGCAGGGCCTaGAGTCATAGGACTCGAACGGCTGGAAGCGGAAGG +
Preference number: 6 (lower is better)
Translates to: WGGRGCAPAGRA*SHRTRTAGSGR
Trigger: CCTTCCGCTTCCAGCCGTTCGAGTCCTATGACTCCAGGCCCTGCCTGCCGGAGCACAACCCCTACCGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000269701.7
ENST00000537303.5
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000680461.1
ENST00000681018.1
ENST00000681812.1
CDS TCA 72 bp CTGGCGGCCCCGTCTGAACTAGGGCCTCAGCAGGTCTaGCAGTCCTTGCTGGCCCGACCTCTATCTTCCACT +
Preference number: 6 (lower is better)
Translates to: LAAPSELGPQQV*QSLLARPLSST
Trigger: AGTGGAAGATAGAGGTCGGGCCAGCAAGGACTGTCAGACCTGCTGAGGCCCTAGTTCAGACGGGGCCGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000680199.1
CDS TCA 72 bp CTCACTCAACTCCTACAGAGCACTAGGCTGAGAGGCTaGGCACAAGCAAGCCCTCTATCCCGGGCAAGGCCA +
Preference number: 6 (lower is better)
Translates to: LTQLLQSTRLRG*AQASPLSRARP
Trigger: TGGCCTTGCCCGGGATAGAGGGCTTGCTTGTGCTCAGCCTCTCAGCCTAGTGCTCTGTAGGAGTTGAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS GCA 72 bp CCCGGCCTCGTGCCACGTTTTACGGGTCCTGTCACATaGCTTACTACCATCCAGGAAAGCACTCATCCTGGG +
Preference number: 6 (lower is better)
Translates to: PGLVPRFTGPVT*LTTIQESTHPG
Trigger: CCCAGGATGAGTGCTTTCCTGGATGGTAGTAAGGCATGTGACAGGACCCGTAAAACGTGGCACGAGGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537303.5
CDS CCA 72 bp CAGGGCTTCCCTCCGCAGCGCTCAGGGAGACACCCTTaGGTGTTTTTAGCTCACTCAACTCCTACAGAGCAC +
Preference number: 6 (lower is better)
Translates to: QGFPPQRSGRHP*VFLAHSTPTEH
Trigger: GTGCTCTGTAGGAGTTGAGTGAGCTAAAAACACCCAAGGGTGTCTCCCTGAGCGCTGCGGAGGGAAGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS CAA 72 bp CCAGGGCTTCCCTCCGCAGCGCTCAGGGAGACACCCTaGGGTGTTTTTAGCTCACTCAACTCCTACAGAGCA +
Preference number: 6 (lower is better)
Translates to: PGLPSAALRETP*GVFSSLNSYRA
Trigger: TGCTCTGTAGGAGTTGAGTGAGCTAAAAACACCCAAGGGTGTCTCCCTGAGCGCTGCGGAGGGAAGCCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS CAA 90 bp TCGAGCTCCACCCAGCATGTCCCAACTATCCCCTGTGGGCAAACTTaGCTCCCAAAAGGCTCTGATTCCAGAAGCAGGGAGCAGGCAGCT +
Preference number: 6 (lower is better)
Translates to: SSSTQHVPTIPCGQT*LPKGSDSRSREQAA
Trigger: AGCTGCCTGCTCCCTGCTTCTGGAATCAGAGCCTTTTGGGAGCAAAGTTTGCCCACAGGGGATAGTTGGGACATGCTGGGTGGAGCTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS TCA 72 bp ACGAGGCTGGGCCGTAGCTGTAGGTTGCGCCTGTGGTaGCACTGGTGTTCTGGGCGCCATAGTAATTGTAGT +
Preference number: 6 (lower is better)
Translates to: TRLGRSCRLRLW*HWCSGRHSNCS
Trigger: ACTACAATTACTATGGCGCCCAGAACACCAGTGTCACCACAGGCGCAACCTACAGCTACGGCCCAGCCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269701.7
ENST00000595416.1
ENST00000598597.7
ENST00000599883.2
ENST00000679798.1
ENST00000680245.1
ENST00000680336.1
ENST00000681018.1
ENST00000681812.1
CDS TCA 72 bp CTCTCCTCTTGGGCTACAGACAACAAGCACACCCCATaGGCTACTTACGAGGGCCATGAAGATGCCCCACAG +
Preference number: 6 (lower is better)
Translates to: LSSWATDNKHTP*ATYEGHEDAPQ
Trigger: CTGTGGGGCATCTTCATGGCCCTCGTAAGTAGCTCATGGGGTGTGCTTGTTGTCTGTAGCCCAAGAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680336.1
CDS CCA 72 bp TGCCGCCTCAGGACCGAAACCTCTCTCTGCAATTTCTaGTGCTGGGATACTTTTGCCCTGCCACTTCTCAAG +
Preference number: 6 (lower is better)
Translates to: CRLRTETSLCNF*CWDTFALPLLK
Trigger: CTTGAGAAGTGGCAGGGCAAAAGTATCCCAGCACCAGAAATTGCAGAGAGAGGTTTCGGTCCTGAGGCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS CAA 72 bp CACCTTAGGGGAAACAGAAACACACAAGAGCCCTGTTaGCAGAACGAAGGCACTGACACCCCAGCTGTCACC +
Preference number: 6 (lower is better)
Translates to: HLRGNRNTQEPC*QNEGTDTPAVT
Trigger: GGTGACAGCTGGGGTGTCAGTGCCTTCGTTCTGCAAACAGGGCTCTTGTGTGTTTCTGTTTCCCCTAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS GCA 72 bp ACCTTAGGGGAAACAGAAACACACAAGAGCCCTGTTTaGAGAACGAAGGCACTGACACCCCAGCTGTCACCT +
Preference number: 6 (lower is better)
Translates to: TLGETETHKSPV*RTKALTPQLSP
Trigger: AGGTGACAGCTGGGGTGTCAGTGCCTTCGTTCTGCAAACAGGGCTCTTGTGTGTTTCTGTTTCCCCTAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS GCA 72 bp CTGCCACTTCTCAAGATCGACAACTTCTCGAGCTCCTaGAGCCAGGATCAGACCACTAGCTTCTCTACAACC +
Preference number: 6 (lower is better)
Translates to: LPLLKIDNFSSS*SQDQTTSFSTT
Trigger: GGTTGTAGAGAAGCTAGTGGTCTGATCCTGGCTGCAGGAGCTCGAGAAGTTGTCGATCTTGAGAAGTGGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS CAA 90 bp TTCCATATGCACCTTAGGGGAAACAGAAACACACAAGAGCCCTGTTaGCAGAACGAAGGCACTGACACCCCAGCTGTCACCTTGCTCCAC +
Preference number: 6 (lower is better)
Translates to: FHMHLRGNRNTQEPC*QNEGTDTPAVTLLH
Trigger: GTGGAGCAAGGTGACAGCTGGGGTGTCAGTGCCTTCGTTCTGCAAACAGGGCTCTTGTGTGTTTCTGTTTCCCCTAAGGTGCATATGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS CAA 90 bp TCAGGACCGAAACCTCTCTCTGCAATTTCTGGTGCTGGGATACTTTaGCCCTGCCACTTCTCAAGATCGACAACTTCTCGAGCTCCTGCA +
Preference number: 6 (lower is better)
Translates to: SGPKPLSAISGAGIL*PCHFSRSTTSRAPA
Trigger: TGCAGGAGCTCGAGAAGTTGTCGATCTTGAGAAGTGGCAGGGCAAAAGTATCCCAGCACCAGAAATTGCAGAGAGAGGTTTCGGTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS GCA 72 bp TTCATAACCTTGCCAGCTGGCCACACCAGTTCCATATaGACCTTAGGGGAAACAGAAACACACAAGAGCCCT +
Preference number: 6 (lower is better)
Translates to: FITLPAGHTSSI*TLGETETHKSP
Trigger: AGGGCTCTTGTGTGTTTCTGTTTCCCCTAAGGTGCATATGGAACTGGTGTGGCCAGCTGGCAAGGTTATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000679798.1
CDS GCA 72 bp AACCTCTCTCTGCAATTTCTGGTGCTGGGATACTTTTaGCCTGCCACTTCTCAAGATCGACAACTTCTCGAG +
Preference number: 6 (lower is better)
Translates to: NLSLQFLVLGYF*PATSQDRQLLE
Trigger: CTCGAGAAGTTGTCGATCTTGAGAAGTGGCAGGGCAAAAGTATCCCAGCACCAGAAATTGCAGAGAGAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000681018.1
CDS TCA 72 bp GCCTTACTACCATCCAGGAAAGCACTCATCCTGGGATaGCAACTCACCTTTGAAAGGATCTGGTTTTGGTTT +
Preference number: 6 (lower is better)
Translates to: ALLPSRKALILG*QLTFERIWFWF
Trigger: AAACCAAAACCAGATCCTTTCAAAGGTGAGTTGTCATCCCAGGATGAGTGCTTTCCTGGATGGTAGTAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537303.5
CDS GCA 72 bp AGGAACAAAAGGCCACACGTTTCGCGACTCCATTTGTaGAAAATGTCTAGAACACACAAATCCAGAGACCAG +
Preference number: 6 (lower is better)
Translates to: RNKRPHVSRLHL*KMSRTHKSRDQ
Trigger: CTGGTCTCTGGATTTGTGTGTTCTAGACATTTTGCACAAATGGAGTCGCGAAACGTGTGGCCTTTTGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000680336.1
CDS CCA 72 bp CACATGCCTTACTACCATCCAGGAAAGCACTCATCCTaGGATGACAACTCACCTTTGAAAGGATCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: HMPYYHPGKHSS*DDNSPLKGSGF
Trigger: AAAACCAGATCCTTTCAAAGGTGAGTTGTCATCCCAGGATGAGTGCTTTCCTGGATGGTAGTAAGGCATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537303.5