RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP7 (Homo sapiens)

Ensembl gene IDs: ENSG00000118507

Ensembl transcript IDs: ENST00000263050.3, ENST00000342266.4, ENST00000366358.2, ENST00000431975.7, ENST00000474850.2, ENST00000535150.1, ENST00000537868.5, ENST00000541650.5, ENST00000543815.5, ENST00000683794.1

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGCGTCCAGGAGGCATAACCCAAAGTTCCCTTTCCCTTGTGCGTaGCTGAGGGCGAATGAAACTTGGGCCATTCTTCTTTCATCAATT +
Preference number: 1 (lower is better)
Translates to: FASRRHNPKFPFPCA*LRANETWAILLSSI
Trigger: AATTGATGAAAGAAGAATGGCCCAAGTTTCATTCGCCCTCAGCCACGCACAAGGGAAAGGGAACTTTGGGTTATGCCTCCTGGACGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR TCA 90 bp CGTCCAGGAGGCATAACCCAAAGTTCCCTTTCCCTTGTGCGTGGCTaGGGGCGAATGAAACTTGGGCCATTCTTCTTTCATCAATTAATT +
Preference number: 1 (lower is better)
Translates to: RPGGITQSSLSLVRG*GRMKLGPFFFHQLI
Trigger: AATTAATTGATGAAAGAAGAATGGCCCAAGTTTCATTCGCCCTCAGCCACGCACAAGGGAAAGGGAACTTTGGGTTATGCCTCCTGGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR GCA 90 bp TCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTaGAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCT +
Preference number: 1 (lower is better)
Translates to: SYRGSFSRCSFKQKQ*KQVQMARDTIRPGA
Trigger: AGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
3UTR CCA 90 bp CTGGCCTCAGATAAAGTAGTCAAATGCCCTGCTAAGCAATATAAATaGCAGTATTCCATTGATGGCAAGGCCTCTTTCTCGGCCTTTAAT +
Preference number: 1 (lower is better)
Translates to: LASDKVVKCPAKQYK*QYSIDGKASFSAFN
Trigger: ATTAAAGGCCGAGAAAGAGGCCTTGCCATCAATGGAATACTGCCATTTATATTGCTTAGCAGGGCATTTGACTACTTTATCTGAGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR TCA 90 bp TTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTaGTTTAGCAACAATTGTGTCAACAGGAGGCAAGTGACCCTTAAA +
Preference number: 1 (lower is better)
Translates to: LKVTLDVDTPGQRFF*FSNNCVNRRQVTLK
Trigger: TTTAAGGGTCACTTGCCTCCTGTTGACACAATTGTTGCTAAATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
3UTR GCA 90 bp ATTTTCTTTGGCAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTaGTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAA +
Preference number: 1 (lower is better)
Translates to: IFFGKKLLIPHQMLV*CCADTIRNFFGVYQ
Trigger: TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTGCCAAAGAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
3UTR CAA 90 bp TGGCAGTATTCCATTGATGGCAAGGCCTCTTTCTCGGCCTTTAATTaGCGTCCAGGAGGCATAACCCAAAGTTCCCTTTCCCTTGTGCGT +
Preference number: 2 (lower is better)
Translates to: WQYSIDGKASFSAFN*RPGGITQSSLSLVR
Trigger: ACGCACAAGGGAAAGGGAACTTTGGGTTATGCCTCCTGGACGCAAATTAAAGGCCGAGAAAGAGGCCTTGCCATCAATGGAATACTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR TCA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACGTGGCTGAGGGCGAATaGAACTTGGGCCATTCTTCT +
Preference number: 2 (lower is better)
Translates to: HHTGEVFQDALSNRSSANVAEGE*NLGHSS
Trigger: AGAAGAATGGCCCAAGTTTCATTCGCCCTCAGCCAC...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CCA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACCCTTTCCCTTGTGCGTaGCTGAGGGCGAATGAAACT +
Preference number: 2 (lower is better)
Translates to: HHTGEVFQDALSNRSSANPFPCA*LRANET
Trigger: AGTTTCATTCGCCCTCAGCCACGCACAAGGGAAAGG...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR TCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGTGGCTGAGGGCGAATaGAACTTGGGCCATTCTTCT +
Preference number: 2 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMVAEGE*NLGHSS
Trigger: AGAAGAATGGCCCAAGTTTCATTCGCCCTCAGCCAC...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR GCA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGGTTGTGTTTCAGCAATaGGAACACATCGATCATGAA +
Preference number: 2 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRVVFQQ*EHIDHE
Trigger: TTCATGATCGATGTGTTCGCATTGCTGAAACACAAC...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CCA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTCCTTTCCCTTGTGCGTaGCTGAGGGCGAATGAAACT +
Preference number: 2 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLIPFPCA*LRANET
Trigger: AGTTTCATTCGCCCTCAGCCACGCACAAGGGAAAGG...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGGATACGATAAGACCTaGAGCTTATCTTCGGACACG +
Preference number: 2 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMGYDKT*SLSSDT
Trigger: CGTGTCCGAAGATAAGCTCCAGGTCTTATCGTATCC...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
3UTR-3UTR TCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTATGGCAGTATTCCATTaGTGGCAAGGCCTCTTTCTC +
Preference number: 2 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLMAVFH*WQGLFL
Trigger: GAGAAAGAGGCCTTGCCATCAATGGAATACTGCCAT...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR GCA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACGTTGTGTTTCAGCAATaGGAACACATCGATCATGAA +
Preference number: 2 (lower is better)
Translates to: HHTGEVFQDALSNRSSANVVFQQ*EHIDHE
Trigger: TTCATGATCGATGTGTTCGCATTGCTGAAACACAAC...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGTTCCTCACCAAATGTTaGTTTGCTGTTGTGCAGACA +
Preference number: 2 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMFLTKC*FAVVQT
Trigger: TGTCTGCACAACAGCAAACCAACATTTGGTGAGGAA...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
3UTR-3UTR TCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCCGAACACATCGATCATaGAAAGTATTAGGCAATCTT +
Preference number: 2 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFRTHRS*KVLGNL
Trigger: AAGATTGCCTAATACTTTTCATGATCGATGTGTTCG...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR TCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGATGTCAAAGTTGTGCTaGAATCAACGTCATTTGCTG +
Preference number: 2 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMMSKLC*NQRHLL
Trigger: CAGCAAATGACGTTGATTTCAGCACAACTTTGACAT...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR CAA 90 bp TATGTCAAAGTTGTGCTGAAATCAACGTCATTTGCTGAATTACTGTaGTTAATAAGTCTTCCTTCAAAAAGCTCCCTCCTAATTCTGGCC +
Preference number: 2 (lower is better)
Translates to: YVKVVLKSTSFAELL*LISLPSKSSLLILA
Trigger: GGCCAGAATTAGGAGGGAGCTTTTTGAAGGAAGACTTATTAACAACAGTAATTCAGCAAATGACGTTGATTTCAGCACAACTTTGACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR GCA 90 bp ATAAAGATCACACTGCATAGCAACAGCACACTTAGGACAAACATGAAACATTATTCAATTAATTTCCTCTaGCAGTCCCAGCACTCCATT +
Preference number: 2 (lower is better)
Translates to: IKITLHSNSTLRTNMKHYSINFL*QSQHSI
Trigger: AATGGAGTGCTGGGACTGGCAGAGGAAATTAATTGA...ATAATGTTTCATGTTTGTCCTAAGTGTGCTGTTGCTATGCAGTGTGATCTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR GCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGCCCATCGTTTCTCGATaGAAAGCTTCATTAATTAAG +
Preference number: 2 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMPIVSR*KASLIK
Trigger: CTTAATTAATGAAGCTTTGCATCGAGAAACGATGGG...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAAGCTAAGCAATATAAATaGCAGTATTCCATTGATGGC +
Preference number: 2 (lower is better)
Translates to: VFQDALSNRSSANKFRWQAKQYK*QYSIDG
Trigger: GCCATCAATGGAATACTGCCATTTATATTGCTTAGC...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR CAA 90 bp AATTTTCTTTGGCAAGAAATTGCTAATTCCTCACCAAATGTTGGTTaGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCA +
Preference number: 2 (lower is better)
Translates to: NFLWQEIANSSPNVG*LLCRHYQKLLWCLP
Trigger: TGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTGCCAAAGAAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
3UTR CAA 90 bp ACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTaGGTGTTTACCAAAGAGCTACTTAATAAGCTGAAAAGATTTCAT +
Preference number: 2 (lower is better)
Translates to: TKCWFAVVQTLSETS*VFTKELLNKLKRFH
Trigger: ATGAAATCTTTTCAGCTTATTAAGTAGCTCTTTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
3UTR CCA 72 bp AGGAGGCATAACCCAAAGTTCCCTTTCCCTTGTGCGTaGCTGAGGGCGAATGAAACTTGGGCCATTCTTCTT +
Preference number: 3 (lower is better)
Translates to: RRHNPKFPFPCA*LRANETWAILL
Trigger: AAGAAGAATGGCCCAAGTTTCATTCGCCCTCAGCCACGCACAAGGGAAAGGGAACTTTGGGTTATGCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CAA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTGGAAGCAGGGAGGCTTaGCACAGAGACATGGGGGCC +
Preference number: 3 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSGSREA*HRDMGA
Trigger: GGCCCCCATGTCTCTGTGCAAAGCCTCCCTGCTTCC...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
3UTR-3UTR CAA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTGGAAGCAGGGAGGCTTaGCACAGAGACATGGGGGCC +
Preference number: 3 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLIGSREA*HRDMGA
Trigger: GGCCCCCATGTCTCTGTGCAAAGCCTCCCTGCTTCC...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CAA 90 bp ACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTGGAAGCAGGGAGGCTTaGCACAGAGACATGGGGGCC +
Preference number: 3 (lower is better)
Translates to: TSIMKSIRQSSQIAPEKLGSREA*HRDMGA
Trigger: GGCCCCCATGTCTCTGTGCAAAGCCTCCCTGCTTCC...AAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
3UTR-3UTR CAA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGGAAGCAGGGAGGCTTaGCACAGAGACATGGGGGCC +
Preference number: 3 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIGSREA*HRDMGA
Trigger: GGCCCCCATGTCTCTGTGCAAAGCCTCCCTGCTTCC...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
3UTR-3UTR CAA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGTTCTCGGCCTTTAATTaGCGTCCAGGAGGCATAACC +
Preference number: 3 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRFSAFN*RPGGIT
Trigger: GGTTATGCCTCCTGGACGCAAATTAAAGGCCGAGAA...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CAA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTAAAGTTCCCTTTCCCTaGTGCGTGGCTGAGGGCGAA +
Preference number: 3 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLIKVPFP*CVAEGE
Trigger: TTCGCCCTCAGCCACGCACAAGGGAAAGGGAACTTT...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CAA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTCTCGGCCTTTAATTaGCGTCCAGGAGGCATAACC +
Preference number: 3 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFFSAFN*RPGGIT
Trigger: GGTTATGCCTCCTGGACGCAAATTAAAGGCCGAGAA...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CAA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAATGGCAGTATTCCATaGATGGCAAGGCCTCTTTCT +
Preference number: 3 (lower is better)
Translates to: HHTGEVFQDALSNRSSANNGSIP*MARPLS
Trigger: AGAAAGAGGCCTTGCCATCAATGGAATACTGCCATT...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR TCA 72 bp ACACTAGATGTAGACACACCTGGACAACGCTTCTTTTaGTTTAGCAACAATTGTGTCAACAGGAGGCAAGTG +
Preference number: 3 (lower is better)
Translates to: TLDVDTPGQRFF*FSNNCVNRRQV
Trigger: CACTTGCCTCCTGTTGACACAATTGTTGCTAAATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
3UTR CCA 72 bp GATAAAGTAGTCAAATGCCCTGCTAAGCAATATAAATaGCAGTATTCCATTGATGGCAAGGCCTCTTTCTCG +
Preference number: 3 (lower is better)
Translates to: DKVVKCPAKQYK*QYSIDGKASFS
Trigger: CGAGAAAGAGGCCTTGCCATCAATGGAATACTGCCATTTATATTGCTTAGCAGGGCATTTGACTACTTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CAA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACTCCATTTTTCTTCTGTaGTGTTTCAGCAATGCGAAC +
Preference number: 3 (lower is better)
Translates to: HHTGEVFQDALSNRSSANSIFLL*CFSNAN
Trigger: GTTCGCATTGCTGAAACACAACAGAAGAAAAATGGA...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CAA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAATCCATTTTTCTTCTGTaGTGTTTCAGCAATGCGAAC +
Preference number: 3 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQSIFLL*CFSNAN
Trigger: GTTCGCATTGCTGAAACACAACAGAAGAAAAATGGA...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR-3UTR CAA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGTCACCAAATGTTGGTTaGCTGTTGTGCAGACACTAT +
Preference number: 3 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMSPNVG*LLCRHY
Trigger: ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGA...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
3UTR TCA 72 bp TTCTGTTGTGTTTCAGCAATGCGAACACATCGATCATaGAAAGTATTAGGCAATCTTCACAGATTGCACCAG +
Preference number: 3 (lower is better)
Translates to: FCCVSAMRTHRS*KVLGNLHRLHQ
Trigger: CTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
3UTR GCA 72 bp TGTGTGAGAGTTCTGGCCTCAGATAAAGTAGTCAAATaGCCTGCTAAGCAATATAAATGGCAGTATTCCATT +
Preference number: 3 (lower is better)
Translates to: CVRVLASDKVVK*PAKQYKWQYSI
Trigger: AATGGAATACTGCCATTTATATTGCTTAGCAGGGCATTTGACTACTTTATCTGAGGCCAGAACTCTCACACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR GCA 72 bp TACCAACAATCATCATACCGGGGAAGTTTTTCAAGATaGTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAG +
Preference number: 3 (lower is better)
Translates to: YQQSSYRGSFSR*SFKQKQCKQVQ
Trigger: CTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGATTGTTGGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
3UTR-3UTR CAA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTGGCAATCTTCACAGATaGCACCAGAGAAACTTAACT +
Preference number: 3 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLIGNLHR*HQRNLT
Trigger: AGTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCC...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR GCA 72 bp TGTTTCACTTTGGACTTCAGACCCATCGTTTCTCGATaGAAAGCTTCATTAATTAAGTCTCGAATTCCAATA +
Preference number: 3 (lower is better)
Translates to: CFTLDFRPIVSR*KASLIKSRIPI
Trigger: TATTGGAATTCGAGACTTAATTAATGAAGCTTTGCATCGAGAAACGATGGGTCTGAAGTCCAAAGTGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR TCA 72 bp CTTCTTTGGTGTTTACCAAAGAGCTACTTAATAAGCTaGAAAGATTTCATAAGCTATGTTGTCACAATCGCA +
Preference number: 3 (lower is better)
Translates to: LLWCLPKSYLIS*KDFISYVVTIA
Trigger: TGCGATTGTGACAACATAGCTTATGAAATCTTTTCAGCTTATTAAGTAGCTCTTTGGTAAACACCAAAGAAG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR GCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGGCGGAGGCCAGGCCTaGGGAAGCGCGGAGCTTCCC +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGGGGQA*GSAELP
Trigger: GGGAAGCTCCGCGCTTCCGCAGGCCTGGCCTCCGCC...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431975.7
CDS-3UTR CCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAACTTCGGGGCGCTCCATaGTCGCGGCGCATGCGGGCG +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQLRGAP*SRRMRA
Trigger: CGCCCGCATGCGCCGCGACCATGGAGCGCCCCGAAG...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTCATGGTCGCGGCGCATaGGGGCGGCGCGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIHGRGA*GRRVWA
Trigger: AGCCCAGACGCGCCGCCCGCATGCGCCGCGACCATG...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431975.7
CDS-3UTR CCA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGCTTTGCACAGAGACATaGGGGCCTGCGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRLCTET*GPAFRA
Trigger: AGCCCGGAACGCAGGCCCCCATGTCTCTGTGCAAAG...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTCTTCGGGGCGCTCCATaGTCGCGGCGCATGCGGGCG +
Preference number: 4 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLLRGAP*SRRMRA
Trigger: CGCCCGCATGCGCCGCGACCATGGAGCGCCCCGAAG...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp ATAAAGATCACACTGCATAGCAACAGCACACTTAGGACAAACATGAAACATTATGCCGCAGCACCCGCATaGCAGGCCGGACGCCGGAAC +
Preference number: 4 (lower is better)
Translates to: IKITLHSNSTLRTNMKHYAAAPA*QAGRRN
Trigger: GTTCCGGCGTCCGGCCTGGCATGCGGGTGCTGCGGC...ATAATGTTTCATGTTTGTCCTAAGTGTGCTGTTGCTATGCAGTGTGATCTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431975.7
CDS-3UTR CCA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGTCCTCCAGATACTGCTaGACAGCCTTGAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRSSRYC*TALSTA
Trigger: CGCGGTGCTCAAGGCTGTCCAGCAGTATCTGGAGGA...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR CAA 72 bp TCCATTGATGGCAAGGCCTCTTTCTCGGCCTTTAATTaGCGTCCAGGAGGCATAACCCAAAGTTCCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SIDGKASFSAFN*RPGGITQSSLS
Trigger: GGAAAGGGAACTTTGGGTTATGCCTCCTGGACGCAAATTAAAGGCCGAGAAAGAGGCCTTGCCATCAATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACTCCCTTGTGCGTGGCTaGGGGCGAATGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: HHTGEVFQDALSNRSSANSLVRG*GRMKLG
Trigger: CCCAAGTTTCATTCGCCCTCAGCCACGCACAAGGGA...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAAGCTTGAAGAGCCAATaGACACGCCGCCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQSLKSQ*TRRRGR
Trigger: TCTCCCCCGGCGGCGTGTGCATTGGCTCTTCAAGCT...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR GCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCAGAGACATGGGGGCCTaGGTTCCGGGCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFRDMGA*VPGSFP
Trigger: AGGAAATGAGCCCGGAACGCAGGCCCCCATGTCTCT...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp TTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACAGAGACATGGGGGCCTaGGTTCCGGGCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LLIPHQMLVCCCADTIRNRDMGA*VPGSFP
Trigger: AGGAAATGAGCCCGGAACGCAGGCCCCCATGTCTCT...GTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAAGAGACATGGGGGCCTaGGTTCCGGGCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQRDMGA*VPGSFP
Trigger: AGGAAATGAGCCCGGAACGCAGGCCCCCATGTCTCT...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp AAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCCTTTGCACAGAGACATaGGGGCCTGCGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: KCWFAVVQTLSETSLVFTLCTET*GPAFRA
Trigger: AGCCCGGAACGCAGGCCCCCATGTCTCTGTGCAAAG...GGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGCTTTGCACAGAGACATaGGGGCCTGCGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQLCTET*GPAFRA
Trigger: AGCCCGGAACGCAGGCCCCCATGTCTCTGTGCAAAG...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR TCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTACTGCTGGACAGCCTTaGGCACCGCGTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQITAGQP*APRSPP
Trigger: TGGTGGAGAACGCGGTGCTCAAGGCTGTCCAGCAGT...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR TCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTGGCTGAGGGCGAATaGAACTTGGGCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGVAEGE*NLGHSS
Trigger: AGAAGAATGGCCCAAGTTTCATTCGCCCTCAGCCAC...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAATCCCTTGTGCGTGGCTaGGGGCGAATGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQSLVRG*GRMKLG
Trigger: CCCAAGTTTCATTCGCCCTCAGCCACGCACAAGGGA...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGTCCCTTGTGCGTGGCTaGGGGCGAATGAAACTTGGG +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQSLVRG*GRMKLG
Trigger: CCCAAGTTTCATTCGCCCTCAGCCACGCACAAGGGA...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGATGGCAGTATTCCATTaGTGGCAAGGCCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRMAVFH*WQGLFL
Trigger: GAGAAAGAGGCCTTGCCATCAATGGAATACTGCCAT...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTAGAGACATGGGGGCCTaGGTTCCGGGCTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSRDMGA*VPGSFP
Trigger: AGGAAATGAGCCCGGAACGCAGGCCCCCATGTCTCT...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR GCA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACCTGGCCATAGGTCAGTaGCATGTGTTCTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: HHTGEVFQDALSNRSSANLAIGQ*HVFCLA
Trigger: AGCCAGACAGAACACATGGCACTGACCTATGGCCAG...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR CCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCCTCCAGATACTGCTaGACAGCCTTGAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSSSRYC*TALSTA
Trigger: CGCGGTGCTCAAGGCTGTCCAGCAGTATCTGGAGGA...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CCA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTCTTTGCACAGAGACATaGGGGCCTGCGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLILCTET*GPAFRA
Trigger: AGCCCGGAACGCAGGCCCCCATGTCTCTGTGCAAAG...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTCCTTTCCCTTGTGCGTaGCTGAGGGCGAATGAAACT +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGPFPCA*LRANET
Trigger: AGTTTCATTCGCCCTCAGCCACGCACAAGGGAAAGG...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGGGATACGATAAGACCTaGAGCTTATCTTCGGACACG +
Preference number: 4 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRGYDKT*SLSSDT
Trigger: CGTGTCCGAAGATAAGCTCCAGGTCTTATCGTATCC...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGGCTGGCCCATGGCACTaGTCCTGTCTGTCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQAGPWH*SCLSFL
Trigger: CAGGAAAGACAGACAGGACCAGTGCCATGGGCCAGC...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS-3UTR TCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCCCACCAGCCTCTTACTaGGCCTTACTAGTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFPPASY*ALLVQR
Trigger: ACGCTGAACTAGTAAGGCTCAGTAAGAGGCTGGTGG...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCGGGACTGGCATTCAGTaGAGGAAGTGGCTATACGCT +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFGTGIQ*RKWLYA
Trigger: AGCGTATAGCCACTTCCTTCACTGAATGCCAGTCCC...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR GCA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATTCTGCGAGCACACCCTaGCTTTTTCACTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYSASTP*LFHSTE
Trigger: CTCCGTGGAGTGAAAAAGGCAGGGTGTGCTCGCAGA...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR CCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTTCCTCCAGATACTGCTaGACAGCCTTGAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQISSRYC*TALSTA
Trigger: CGCGGTGCTCAAGGCTGTCCAGCAGTATCTGGAGGA...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CCA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACTCCTCCAGATACTGCTaGACAGCCTTGAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNSSRYC*TALSTA
Trigger: CGCGGTGCTCAAGGCTGTCCAGCAGTATCTGGAGGA...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR TCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGCCACCAGCCTCTTACTaGGCCTTACTAGTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMPPASY*ALLVQR
Trigger: ACGCTGAACTAGTAAGGCTCAGTAAGAGGCTGGTGG...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAACCACCAGCCTCTTACTaGGCCTTACTAGTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQPPASY*ALLVQR
Trigger: ACGCTGAACTAGTAAGGCTCAGTAAGAGGCTGGTGG...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATGTGGCTGAGGGCGAATaGAACTTGGGCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYVAEGE*NLGHSS
Trigger: AGAAGAATGGCCCAAGTTTCATTCGCCCTCAGCCAC...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCGAAAGGAACCATCACTaGCCATTGCTTTGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFERNHH*PLLWPV
Trigger: GACTGGCCAAAGCAATGGTCAGTGATGGTTCCTTTC...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp ACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTTCTGCGAGCACACCCTaGCTTTTTCACTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: TSIMKSIRQSSQIAPEKLSASTP*LFHSTE
Trigger: CTCCGTGGAGTGAAAAAGGCAGGGTGTGCTCGCAGA...AAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS-3UTR CCA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCCTTTCCCTTGTGCGTaGCTGAGGGCGAATGAAACT +
Preference number: 4 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYPFPCA*LRANET
Trigger: AGTTTCATTCGCCCTCAGCCACGCACAAGGGAAAGG...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACCCACCAGCCTCTTACTaGGCCTTACTAGTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNPPASY*ALLVQR
Trigger: ACGCTGAACTAGTAAGGCTCAGTAAGAGGCTGGTGG...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR TCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGTGGCTGAGGGCGAATaGAACTTGGGCCATTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIVAEGE*NLGHSS
Trigger: AGAAGAATGGCCCAAGTTTCATTCGCCCTCAGCCAC...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGATGTCAAAGTTGTGCTaGAATCAACGTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRMSKLC*NQRHLL
Trigger: CAGCAAATGACGTTGATTTCAGCACAACTTTGACAT...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAATTCTCACAAAACTGTaGGTCCCTGGCCATAGGTCA +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQILTKL*VPGHRS
Trigger: TGACCTATGGCCAGGGACTCACAGTTTTGTGAGAAT...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR TCA 90 bp TTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACACCAGCAGGGTAATATaGAAGGAACCATCACTGACC +
Preference number: 4 (lower is better)
Translates to: LLIPHQMLVCCCADTIRNTSRVI*KEPSLT
Trigger: GGTCAGTGATGGTTCCTTTCATATTACCCTGCTGGT...GTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGACCATCACTGACCATTaGTTTGGCCAGTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQTITDH*FGQSLI
Trigger: GATGAGCGACTGGCCAAAGCAATGGTCAGTGATGGT...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431975.7
CDS-3UTR GCA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATACCATCACTGACCATTaGTTTGGCCAGTCGCTCATC +
Preference number: 4 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYTITDH*FGQSLI
Trigger: GATGAGCGACTGGCCAAAGCAATGGTCAGTGATGGT...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTCCTTTCCCTTGTGCGTaGCTGAGGGCGAATGAAACT +
Preference number: 4 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLPFPCA*LRANET
Trigger: AGTTTCATTCGCCCTCAGCCACGCACAAGGGAAAGG...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCGGATACGATAAGACCTaGAGCTTATCTTCGGACACG +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFGYDKT*SLSSDT
Trigger: CGTGTCCGAAGATAAGCTCCAGGTCTTATCGTATCC...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACCTCCTAATTCTGGCCTaGGTCTCAGGCTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: HHTGEVFQDALSNRSSANLLILA*VSGFNK
Trigger: TTTATTAAAGCCTGAGACTCAGGCCAGAATTAGGAG...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTTCAACAGGAGGCAAGTaGCCCTTAAAATACTGTTGT +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGSTGGK*PLKYCC
Trigger: ACAACAGTATTTTAAGGGTCACTTGCCTCCTGTTGA...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAACGAGAAAAACCACAATaGGCCCTTTCTCCTACAGAC +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQREKPQ*ALSPTD
Trigger: GTCTGTAGGAGAAAGGGCTCATTGTGGTTTTTCTCG...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR TCA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGATTCCACAGTCATCCTaGATATCTACAGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRIPQSS*ISTVAN
Trigger: ATTTGCTACTGTAGATATTCAGGATGACTGTGGAAT...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTTTTGAGGTTCATCAGTaGTTCCACAGTCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGFEVHQ*FHSHPE
Trigger: TTCAGGATGACTGTGGAATCACTGATGAACCTCAAA...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTGAAAGGAACCATCACTaGCCATTGCTTTGGCCAGTC +
Preference number: 4 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLIERNHH*PLLWPV
Trigger: GACTGGCCAAAGCAATGGTCAGTGATGGTTCCTTTC...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp AAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCACCAGCAGGGTAATATaGAAGGAACCATCACTGACC +
Preference number: 4 (lower is better)
Translates to: KCWFAVVQTLSETSLVFTTSRVI*KEPSLT
Trigger: GGTCAGTGATGGTTCCTTTCATATTACCCTGCTGGT...GGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGTTCATGAAGGTCAAATaGGGTTTAAAACTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRFMKVK*GLKLLL
Trigger: GAGCAGAAGTTTTAAACCTCATTTGACCTTCATGAA...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp AAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCGCCATTCTGATCAGCTaGTTCGGTTTTCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: KCWFAVVQTLSETSLVFTAILIS*FGFHRA
Trigger: AGCTCTGTGAAAACCGAAGCAGCTGATCAGAATGGC...GGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAAGCCATTCTGATCAGCTaGTTCGGTTTTCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQAILIS*FGFHRA
Trigger: AGCTCTGTGAAAACCGAAGCAGCTGATCAGAATGGC...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTGCCATTCTGATCAGCTaGTTCGGTTTTCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSAILIS*FGFHRA
Trigger: AGCTCTGTGAAAACCGAAGCAGCTGATCAGAATGGC...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTGGATACGATAAGACCTaGAGCTTATCTTCGGACACG +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSGYDKT*SLSSDT
Trigger: CGTGTCCGAAGATAAGCTCCAGGTCTTATCGTATCC...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGCTAATGCAACTGCTCTaGGACTGGCATTCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQLMQLL*DWHSVK
Trigger: CTTCACTGAATGCCAGTCCCAGAGCAGTTGCATTAG...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR TCA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTATGGCAGTATTCCATTaGTGGCAAGGCCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLIMAVFH*WQGLFL
Trigger: GAGAAAGAGGCCTTGCCATCAATGGAATACTGCCAT...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACATGGCAGTATTCCATTaGTGGCAAGGCCTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNMAVFH*WQGLFL
Trigger: GAGAAAGAGGCCTTGCCATCAATGGAATACTGCCAT...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCCTCCTAATTCTGGCCTaGGTCTCAGGCTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFLLILA*VSGFNK
Trigger: TTTATTAAAGCCTGAGACTCAGGCCAGAATTAGGAG...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp TTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACCTCCTAATTCTGGCCTaGGTCTCAGGCTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: LLIPHQMLVCCCADTIRNLLILA*VSGFNK
Trigger: TTTATTAAAGCCTGAGACTCAGGCCAGAATTAGGAG...GTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACATGTCAAAGTTGTGCTaGAATCAACGTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: HHTGEVFQDALSNRSSANMSKLC*NQRHLL
Trigger: CAGCAAATGACGTTGATTTCAGCACAACTTTGACAT...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTATGTCAAAGTTGTGCTaGAATCAACGTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGMSKLC*NQRHLL
Trigger: CAGCAAATGACGTTGATTTCAGCACAACTTTGACAT...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp TTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTCAACAGGAGGCAAGTaGCCCTTAAAATACTGTTGT +
Preference number: 4 (lower is better)
Translates to: LLIPHQMLVCCCADTIRNSTGGK*PLKYCC
Trigger: ACAACAGTATTTTAAGGGTCACTTGCCTCCTGTTGA...GTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCATTTCCCCTCCATCATaGTCTACTCCATCAATGACT +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFISPPS*STPSMT
Trigger: AGTCATTGATGGAGTAGATCATGATGGAGGGGAAAT...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAATGGTGTTCTTCTCCGTaGGGACCCCAAATAGAAATT +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQWCSSP*GPQIEI
Trigger: AATTTCTATTTGGGGTCCTCACGGAGAAGAACACCA...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR TCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAAAAAGTGAGTTTACATaGTCTCCTTCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQKSEFT*SPSASF
Trigger: GAAGCTGGCAGAAGGAGATCATGTAAACTCACTTTT...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp TTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACAAAAGTGAGTTTACATaGTCTCCTTCTGCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLIPHQMLVCCCADTIRNKSEFT*SPSASF
Trigger: GAAGCTGGCAGAAGGAGATCATGTAAACTCACTTTT...GTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTTGCTATCTCCAAAAGTaGGTTTACATGATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGCYLQK*VYMISF
Trigger: GAAGGAGATCATGTAAACTCACTTTTGGAGATAGCA...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACGCCATTCTGATCAGCTaGTTCGGTTTTCACAGAGCT +
Preference number: 4 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNAILIS*FGFHRA
Trigger: AGCTCTGTGAAAACCGAAGCAGCTGATCAGAATGGC...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR GCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCCACCAAATGTTGGTTTaGTGTTGTGCAGACACTATC +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFHQMLV*CCADTI
Trigger: GATAGTGTCTGCACAACAGCAAACCAACATTTGGTG...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR GCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAACACCAAATGTTGGTTTaGTGTTGTGCAGACACTATC +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQHQMLV*CCADTI
Trigger: GATAGTGTCTGCACAACAGCAAACCAACATTTGGTG...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp ACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTGTTTATAGCACAGTCTaGGAGCACACCCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: TSIMKSIRQSSQIAPEKLVYSTV*EHTLPF
Trigger: AAAAGGCAGGGTGTGCTCGCAGACTGTGCTATAAAC...AAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS-3UTR GCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGTTTATAGCACAGTCTaGGAGCACACCCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIVYSTV*EHTLPF
Trigger: AAAAGGCAGGGTGTGCTCGCAGACTGTGCTATAAAC...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS-3UTR GCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTCTCTCCTACCAGGATaGCTTTTTCTTGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFSLLPG*LFLEMS
Trigger: GGACATTTCAAGAAAAAGGCATCCTGGTAGGAGAGA...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAATTCCTCACCAAATGTTaGTTTGCTGTTGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQFLTKC*FAVVQT
Trigger: TGTCTGCACAACAGCAAACCAACATTTGGTGAGGAA...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTCCTCACCAAATGTTaGTTTGCTGTTGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFFLTKC*FAVVQT
Trigger: TGTCTGCACAACAGCAAACCAACATTTGGTGAGGAA...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTAGATGTAGACACACCTaGACAACGCTTCTTTTGATT +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGRCRHT*TTLLLI
Trigger: AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCT...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CCA 90 bp ACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTGGATACGATAAGACCTaGAGCTTATCTTCGGACACG +
Preference number: 4 (lower is better)
Translates to: TSIMKSIRQSSQIAPEKLGYDKT*SLSSDT
Trigger: CGTGTCCGAAGATAAGCTCCAGGTCTTATCGTATCC...AAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTATCTACAGTAGCAAATaGCATGTCTACCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGIYSSK*HVYQRI
Trigger: GATTCTCTGGTAGACATGCCATTTGCTACTGTAGAT...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTCACCACTTGACCAACTaGGTATATCCTTGCTGTATC +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSHHLTN*VYPCCI
Trigger: GATACAGCAAGGATATACCCAGTTGGTCAAGTGGTG...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS-3UTR TCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTCGAACACATCGATCATaGAAAGTATTAGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGRTHRS*KVLGNL
Trigger: AAGATTGCCTAATACTTTTCATGATCGATGTGTTCG...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAACTCCTAATTCTGGCCTaGGTCTCAGGCTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQLLILA*VSGFNK
Trigger: TTTATTAAAGCCTGAGACTCAGGCCAGAATTAGGAG...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAATCAACAGGAGGCAAGTaGCCCTTAAAATACTGTTGT +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQSTGGK*PLKYCC
Trigger: ACAACAGTATTTTAAGGGTCACTTGCCTCCTGTTGA...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCGGACAACGCTTCTTTTaGTTTAGCAACAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFGQRFF*FSNNCV
Trigger: GACACAATTGTTGCTAAATCAAAAGAAGCGTTGTCC...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAGGACAACGCTTCTTTTaGTTTAGCAACAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQGQRFF*FSNNCV
Trigger: GACACAATTGTTGCTAAATCAAAAGAAGCGTTGTCC...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAAATTTCCCCTCCATCATaGTCTACTCCATCAATGACT +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQISPPS*STPSMT
Trigger: AGTCATTGATGGAGTAGATCATGATGGAGGGGAAAT...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTTCCCCTCCATCATaGTCTACTCCATCAATGACT +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQISPPS*STPSMT
Trigger: AGTCATTGATGGAGTAGATCATGATGGAGGGGAAAT...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCATATTTGATCTCCAGTaGTTTCCCCTCCATCATGAT +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFIFDLQ*FPLHHD
Trigger: ATCATGATGGAGGGGAAATCACTGGAGATCAAATAT...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTTGGTGTTCTTCTCCGTaGGGACCCCAAATAGAAATT +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIWCSSP*GPQIEI
Trigger: AATTTCTATTTGGGGTCCTCACGGAGAAGAACACCA...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS-3UTR TCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGGAGGAGTTCTTCTATaGATGGTTTCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGGGVLL*MVSIPK
Trigger: TTTTGGAATTGAAACCATTCATAGAAGAACTCCTCC...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAAGGATGCCTTTTTCTTaGAATGTCCTATTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQRMPFS*NVLFAV
Trigger: GACTGCAAATAGGACATTTCAAGAAAAAGGCATCCT...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACTTCATGAAGGTCAAATaGGGTTTAAAACTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HHTGEVFQDALSNRSSANFMKVK*GLKLLL
Trigger: GAGCAGAAGTTTTAAACCTCATTTGACCTTCATGAA...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCGTTGTGTTTCAGCAATaGGAACACATCGATCATGAA +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFVVFQQ*EHIDHE
Trigger: TTCATGATCGATGTGTTCGCATTGCTGAAACACAAC...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGTCAATTAATTTCCTCTaGCAGTCCCAGCACTCCATT +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQSINFL*QSQHSI
Trigger: AATGGAGTGCTGGGACTGGCAGAGGAAATTAATTGA...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR GCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAATCAATTAATTTCCTCTaGCAGTCCCAGCACTCCATT +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQSINFL*QSQHSI
Trigger: AATGGAGTGCTGGGACTGGCAGAGGAAATTAATTGA...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCACCAAATGTTGGTTTaGTGTTGTGCAGACACTATC +
Preference number: 4 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYHQMLV*CCADTI
Trigger: GATAGTGTCTGCACAACAGCAAACCAACATTTGGTG...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR GCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTCAAACAGAAGCAGTaGAAACAAGTTCAGATGGCA +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFFKQKQ*KQVQMA
Trigger: TGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAA...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGTACATGATCTCCTTCTaGCAGCTTCACAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQYMISF*QLHKSN
Trigger: GTTGGATTTGTGAAGCTGGCAGAAGGAGATCATGTA...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431975.7
CDS-3UTR GCA 90 bp AAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCTACATGATCTCCTTCTaGCAGCTTCACAAATCCAAC +
Preference number: 4 (lower is better)
Translates to: KCWFAVVQTLSETSLVFTYMISF*QLHKSN
Trigger: GTTGGATTTGTGAAGCTGGCAGAAGGAGATCATGTA...GGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTTTGAAATGTCCTATTTaGAGTCTCTGCTATCTCCAA +
Preference number: 4 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGLKCPI*SLCYLQ
Trigger: TTGGAGATAGCAGAGACTGCAAATAGGACATTTCAA...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATTCTCTCCTACCAGGATaGCTTTTTCTTGAAATGTCC +
Preference number: 4 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYSLLPG*LFLEMS
Trigger: GGACATTTCAAGAAAAAGGCATCCTGGTAGGAGAGA...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAATTCCTCACCAAATGTTaGTTTGCTGTTGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQFLTKC*FAVVQT
Trigger: TGTCTGCACAACAGCAAACCAACATTTGGTGAGGAA...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CCA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAAGATGTAGACACACCTaGACAACGCTTCTTTTGATT +
Preference number: 4 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQRCRHT*TTLLLI
Trigger: AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCT...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
3UTR CAA 72 bp TGGCAAGAAATTGCTAATTCCTCACCAAATGTTGGTTaGCTGTTGTGCAGACACTATCAGAAACTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: WQEIANSSPNVG*LLCRHYQKLLW
Trigger: CCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTGCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTCTCCTAATTCTGGCCTaGGTCTCAGGCTTTAATAAA +
Preference number: 4 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLLLILA*VSGFNK
Trigger: TTTATTAAAGCCTGAGACTCAGGCCAGAATTAGGAG...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATATGTCAAAGTTGTGCTaGAATCAACGTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYMSKLC*NQRHLL
Trigger: CAGCAAATGACGTTGATTTCAGCACAACTTTGACAT...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAAATGTCAAAGTTGTGCTaGAATCAACGTCATTTGCTG +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQMSKLC*NQRHLL
Trigger: CAGCAAATGACGTTGATTTCAGCACAACTTTGACAT...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTCAACAGGAGGCAAGTaGCCCTTAAAATACTGTTGT +
Preference number: 4 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLSTGGK*PLKYCC
Trigger: ACAACAGTATTTTAAGGGTCACTTGCCTCCTGTTGA...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGCTCCGTTCTTTTCACTaGTTTTTCCTTCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMLRSFH*FFLHLL
Trigger: CAAGAGATGAAGGAAAAATCAGTGAAAAGAACGGAG...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR TCA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTTTTGAGGTTCATCAGTaGTTCCACAGTCATCCTGAA +
Preference number: 4 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLIFEVHQ*FHSHPE
Trigger: TTCAGGATGACTGTGGAATCACTGATGAACCTCAAA...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAAAAAGTACCAATCCCTTaGAAGGGCAAAGTCAAATGT +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQKVPIP*KGKVKC
Trigger: ACATTTGACTTTGCCCTTTCAAGGGATTGGTACTTT...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAATGCTATCTCCAAAAGTaGGTTTACATGATCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQCYLQK*VYMISF
Trigger: GAAGGAGATCATGTAAACTCACTTTTGGAGATAGCA...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAAAGGATGCCTTTTTCTTaGAATGTCCTATTTGCAGTC +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQRMPFS*NVLFAV
Trigger: GACTGCAAATAGGACATTTCAAGAAAAAGGCATCCT...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGTTCTTTTCACCACTTaGCCAACTGGGTATATCCTT +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIVLFTT*PTGYIL
Trigger: AAGGATATACCCAGTTGGTCAAGTGGTGAAAAGAAC...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS-3UTR GCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTGTTGTGTTTCAGCAATaGGAACACATCGATCATGAA +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSVVFQQ*EHIDHE
Trigger: TTCATGATCGATGTGTTCGCATTGCTGAAACACAAC...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR GCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTCAATTAATTTCCTCTaGCAGTCCCAGCACTCCATT +
Preference number: 4 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLSINFL*QSQHSI
Trigger: AATGGAGTGCTGGGACTGGCAGAGGAAATTAATTGA...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCCCCATCGTTTCTCGATaGAAAGCTTCATTAATTAAG +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFPIVSR*KASLIK
Trigger: CTTAATTAATGAAGCTTTGCATCGAGAAACGATGGG...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR GCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTTCAAACAGAAGCAGTaGAAACAAGTTCAGATGGCA +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSFKQKQ*KQVQMA
Trigger: TGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAA...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp AAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCTTCAAACAGAAGCAGTaGAAACAAGTTCAGATGGCA +
Preference number: 4 (lower is better)
Translates to: KCWFAVVQTLSETSLVFTFKQKQ*KQVQMA
Trigger: TGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAA...GGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAATTCAAACAGAAGCAGTaGAAACAAGTTCAGATGGCA +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQFKQKQ*KQVQMA
Trigger: TGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAA...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACAACTGGGTATATCCTTaGTGTATCTCTGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNNWVYP*CISVGL
Trigger: CAGTCCTACAGAGATACAGCAAGGATATACCCAGTT...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS-3UTR CCA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCGCTAAGCAATATAAATaGCAGTATTCCATTGATGGC +
Preference number: 4 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFAKQYK*QYSIDG
Trigger: GCCATCAATGGAATACTGCCATTTATATTGCTTAGC...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATAGATGTAGACACACCTaGACAACGCTTCTTTTGATT +
Preference number: 4 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYRCRHT*TTLLLI
Trigger: AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCT...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAAAGATGTAGACACACCTaGACAACGCTTCTTTTGATT +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQRCRHT*TTLLLI
Trigger: AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCT...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAAATCTACAGTAGCAAATaGCATGTCTACCAGAGAATC +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQIYSSK*HVYQRI
Trigger: GATTCTCTGGTAGACATGCCATTTGCTACTGTAGAT...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR TCA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAACGAACACATCGATCATaGAAAGTATTAGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQRTHRS*KVLGNL
Trigger: AAGATTGCCTAATACTTTTCATGATCGATGTGTTCG...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGCGAACACATCGATCATaGAAAGTATTAGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMRTHRS*KVLGNL
Trigger: AAGATTGCCTAATACTTTTCATGATCGATGTGTTCG...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGCGAACACATCGATCATaGAAAGTATTAGGCAATCTT +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQRTHRS*KVLGNL
Trigger: AAGATTGCCTAATACTTTTCATGATCGATGTGTTCG...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR TCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTGGACAACGCTTCTTTTaGTTTAGCAACAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLGQRFF*FSNNCV
Trigger: GACACAATTGTTGCTAAATCAAAAGAAGCGTTGTCC...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR TCA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACATATTTGATCTCCAGTaGTTTCCCCTCCATCATGAT +
Preference number: 4 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNIFDLQ*FPLHHD
Trigger: ATCATGATGGAGGGGAAATCACTGGAGATCAAATAT...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR TCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTATTCCACAGTCATCCTaGATATCTACAGTAGCAAAT +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSIPQSS*ISTVAN
Trigger: ATTTGCTACTGTAGATATTCAGGATGACTGTGGAAT...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431975.7
CDS-3UTR TCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGGAGGAGTTCTTCTATaGATGGTTTCAATTCCAAAA +
Preference number: 4 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMGGVLL*MVSIPK
Trigger: TTTTGGAATTGAAACCATTCATAGAAGAACTCCTCC...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTGTTCTCATTGTCATTaGCATTCTGATCAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLCSHCH*HSDQLL
Trigger: AAGCAGCTGATCAGAATGGCAATGACAATGAGAACA...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp ACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTGTTGTGTTTCAGCAATaGGAACACATCGATCATGAA +
Preference number: 4 (lower is better)
Translates to: TSIMKSIRQSSQIAPEKLVVFQQ*EHIDHE
Trigger: TTCATGATCGATGTGTTCGCATTGCTGAAACACAAC...AAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR GCA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAACCCATCGTTTCTCGATaGAAAGCTTCATTAATTAAG +
Preference number: 4 (lower is better)
Translates to: VFQDALSNRSSANKFRWQPIVSR*KASLIK
Trigger: CTTAATTAATGAAGCTTTGCATCGAGAAACGATGGG...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR GCA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTCCCATCGTTTCTCGATaGAAAGCTTCATTAATTAAG +
Preference number: 4 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSPIVSR*KASLIK
Trigger: CTTAATTAATGAAGCTTTGCATCGAGAAACGATGGG...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR GCA 90 bp ATAAAGATCACACTGCATAGCAACAGCACACTTAGGACAAACATGAAACATTATCACCAAATGTTGGTTTaGTGTTGTGCAGACACTATC +
Preference number: 4 (lower is better)
Translates to: IKITLHSNSTLRTNMKHYHQMLV*CCADTI
Trigger: GATAGTGTCTGCACAACAGCAAACCAACATTTGGTG...ATAATGTTTCATGTTTGTCCTAAGTGTGCTGTTGCTATGCAGTGTGATCTTTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGGCTAAGCAATATAAATaGCAGTATTCCATTGATGGC +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQAKQYK*QYSIDG
Trigger: GCCATCAATGGAATACTGCCATTTATATTGCTTAGC...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTAGATGTAGACACACCTaGACAACGCTTCTTTTGATT +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIRCRHT*TTLLLI
Trigger: AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCT...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CCA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGGTCAAATGTTTTCCCTaGAGGAGTTCTTCTATGAAT +
Preference number: 4 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQVKCFP*RSSSMN
Trigger: ATTCATAGAAGAACTCCTCCAGGGAAAACATTTGAC...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431975.7
CDS-3UTR CCA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGTCAAATGTTTTCCCTaGAGGAGTTCTTCTATGAAT +
Preference number: 4 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMVKCFP*RSSSMN
Trigger: ATTCATAGAAGAACTCCTCCAGGGAAAACATTTGAC...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
3UTR CAA 72 bp GTTGTGCTGAAATCAACGTCATTTGCTGAATTACTGTaGTTAATAAGTCTTCCTTCAAAAAGCTCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: VVLKSTSFAELL*LISLPSKSSLL
Trigger: TAGGAGGGAGCTTTTTGAAGGAAGACTTATTAACAACAGTAATTCAGCAAATGACGTTGATTTCAGCACAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
3UTR CAA 72 bp TGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTaGGTGTTTACCAAAGAGCTACTTAATAAGCTGAAA +
Preference number: 4 (lower is better)
Translates to: WFAVVQTLSETS*VFTKELLNKLK
Trigger: TTTCAGCTTATTAAGTAGCTCTTTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR GCA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTCCCATCGTTTCTCGATaGAAAGCTTCATTAATTAAG +
Preference number: 4 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLPIVSR*KASLIK
Trigger: CTTAATTAATGAAGCTTTGCATCGAGAAACGATGGG...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTAAGTTTGAAACCACTTaGAAGAGGACAATCCATTTG +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIKFETT*KRTIHL
Trigger: CAAATGGATTGTCCTCTTCCAAGTGGTTTCAAACTT...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263050.3
CDS-3UTR CCA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCTAAGCAATATAAATaGCAGTATTCCATTGATGGC +
Preference number: 4 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIAKQYK*QYSIDG
Trigger: GCCATCAATGGAATACTGCCATTTATATTGCTTAGC...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS GCA 90 bp GGAATTAATTCCTCCCGCTTCGGGGCGCTCCATGGTCGCGGCGCATaGGGGCGGCGCGTCTGGGCTGGCGGCAGCGGCGGTGGCGGGCCG +
Preference number: 5 (lower is better)
Translates to: GINSSRFGALHGRGA*GRRVWAGGSGGGGP
Trigger: CGGCCCGCCACCGCCGCTGCCGCCAGCCCAGACGCGCCGCCCGCATGCGCCGCGACCATGGAGCGCCCCGAAGCGGGAGGAATTAATTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000683794.1
CDS GCA 90 bp GCCTTTTTCACTCCACGGAGCAGCACAGGCAGCTTGAAGAGCCAATaGACACGCCGCCGGGGGAGAGAAAGGAGAAGGGAACTTGCTGCC +
Preference number: 5 (lower is better)
Translates to: AFFTPRSSTGSLKSQ*TRRRGRERRRELAA
Trigger: GGCAGCAAGTTCCCTTCTCCTTTCTCTCCCCCGGCGGCGTGTGCATTGGCTCTTCAAGCTGCCTGTGCTGCTCCGTGGAGTGAAAAAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS CCA 90 bp CCCTCCCCCGGCTTGTTTTTATTCTGTGTTTCCTCCAGATACTGCTaGACAGCCTTGAGCACCGCGTTCTCCACCAGCCTCTTACTGAGC +
Preference number: 5 (lower is better)
Translates to: PSPGLFLFCVSSRYC*TALSTAFSTSLLLS
Trigger: GCTCAGTAAGAGGCTGGTGGAGAACGCGGTGCTCAAGGCTGTCCAGCAGTATCTGGAGGAAACACAGAATAAAAACAAGCCGGGGGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS GCA 90 bp TCAGCAGAGGGAAGCAGGGAGGCTTTGCACAGAGACATGGGGGCCTaGGTTCCGGGCTCATTTCCTGTTGTTCTCATTGTCATTGCCATT +
Preference number: 5 (lower is better)
Translates to: SAEGSREALHRDMGA*VPGSFPVVLIVIAI
Trigger: AATGGCAATGACAATGAGAACAACAGGAAATGAGCCCGGAACGCAGGCCCCCATGTCTCTGTGCAAAGCCTCCCTGCTTCCCTCTGCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS CCA 90 bp AGGCTCCACCTCCAGTCCTCCAGCCTAATGCAACTGCTCTGGGACTaGCATTCAGTGAAGGAAGTGGCTATACGCTCCCGTATTCTCACA +
Preference number: 5 (lower is better)
Translates to: RLHLQSSSLMQLLWD*HSVKEVAIRSRILT
Trigger: TGTGAGAATACGGGAGCGTATAGCCACTTCCTTCACTGAATGCCAGTCCCAGAGCAGTTGCATTAGGCTGGAGGACTGGAGGTGGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS CCA 90 bp CTTCATCTCTTGAGAAAGGAAAGCAGCAAAGCTGGCCCATGGCACTaGTCCTGTCTGTCTTTCCTGGTGTTCTTCTCCGTGAGGACCCCA +
Preference number: 5 (lower is better)
Translates to: LHLLRKESSKAGPWH*SCLSFLVFFSVRTP
Trigger: TGGGGTCCTCACGGAGAAGAACACCAGGAAAGACAGACAGGACCAGTGCCATGGGCCAGCTTTGCTGCTTTCCTTTCTCAAGAGATGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS TCA 90 bp GCCCATGGCACTGGTCCTGTCTGTCTTTCCTGGTGTTCTTCTCCGTaGGGACCCCAAATAGAAATTGCAGTTTATAGCACAGTCTGCGAG +
Preference number: 5 (lower is better)
Translates to: AHGTGPVCLSWCSSP*GPQIEIAVYSTVCE
Trigger: CTCGCAGACTGTGCTATAAACTGCAATTTCTATTTGGGGTCCTCACGGAGAAGAACACCAGGAAAGACAGACAGGACCAGTGCCATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS GCA 90 bp GCTCCCCTCCGTTCTTTTCACCACTTGACCAACTGGGTATATCCTTaGTGTATCTCTGTAGGACTGCAGAGGACGAGCTTTCCAACTCAC +
Preference number: 5 (lower is better)
Translates to: APLRSFHHLTNWVYP*CISVGLQRTSFPTH
Trigger: GTGAGTTGGAAAGCTCGTCCTCTGCAGTCCTACAGAGATACAGCAAGGATATACCCAGTTGGTCAAGTGGTGAAAAGAACGGAGGGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS TCA 90 bp TCAGTGAAGGAAGTGGCTATACGCTCCCGTATTCTCACAAAACTGTaGGTCCCTGGCCATAGGTCAGTGCCATGTGTTCTGTCTGGCTAT +
Preference number: 5 (lower is better)
Translates to: SVKEVAIRSRILTKL*VPGHRSVPCVLSGY
Trigger: ATAGCCAGACAGAACACATGGCACTGACCTATGGCCAGGGACTCACAGTTTTGTGAGAATACGGGAGCGTATAGCCACTTCCTTCACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR CAA 90 bp CATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACTACTGCTGGACAGCCTaGAGCACCGCGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: HHTGEVFQDALSNRSSANYCWTA*STAFST
Trigger: GGTGGAGAACGCGGTGCTCAAGGCTGTCCAGCAGTA...GTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGGGAAGCAGGGAGGCTTaGCACAGAGACATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQGSREA*HRDMGA
Trigger: GGCCCCCATGTCTCTGTGCAAAGCCTCCCTGCTTCC...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CAA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATTACTGCTGGACAGCCTaGAGCACCGCGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYYCWTA*STAFST
Trigger: GGTGGAGAACGCGGTGCTCAAGGCTGTCCAGCAGTA...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACGGAAGCAGGGAGGCTTaGCACAGAGACATGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNGSREA*HRDMGA
Trigger: GGCCCCCATGTCTCTGTGCAAAGCCTCCCTGCTTCC...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CAA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTTACTGCTGGACAGCCTaGAGCACCGCGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIYCWTA*STAFST
Trigger: GGTGGAGAACGCGGTGCTCAAGGCTGTCCAGCAGTA...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CAA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACTACTGCTGGACAGCCTaGAGCACCGCGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNYCWTA*STAFST
Trigger: GGTGGAGAACGCGGTGCTCAAGGCTGTCCAGCAGTA...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CAA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGAGCAGCACAGGCAGCTaGAAGAGCCAATGCACACGC +
Preference number: 5 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMSSTGS*KSQCTR
Trigger: GCGTGTGCATTGGCTCTTCAAGCTGCCTGTGCTGCT...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR CAA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATAAAGTTCCCTTTCCCTaGTGCGTGGCTGAGGGCGAA +
Preference number: 5 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYKVPFP*CVAEGE
Trigger: TTCGCCCTCAGCCACGCACAAGGGAAAGGGAACTTT...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS GCA 90 bp TTGCATCACCAGCAGGGTAATATGAAAGGAACCATCACTGACCATTaGTTTGGCCAGTCGCTCATCTTGTTGTATTATTGCATTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LHHQQGNMKGTITDH*FGQSLILLYYCILQ
Trigger: CTGCAGAATGCAATAATACAACAAGATGAGCGACTGGCCAAAGCAATGGTCAGTGATGGTTCCTTTCATATTACCCTGCTGGTGATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431975.7
ENST00000535150.1
ENST00000541650.5
ENST00000543815.5
ENST00000683794.1
CDS-3UTR CAA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTAAAGTTCCCTTTCCCTaGTGCGTGGCTGAGGGCGAA +
Preference number: 5 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLKVPFP*CVAEGE
Trigger: TTCGCCCTCAGCCACGCACAAGGGAAAGGGAACTTT...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTCACTGACCATTGCTTaGGCCAGTCGCTCATCTTGT +
Preference number: 5 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFSLTIA*ASRSSC
Trigger: ACAAGATGAGCGACTGGCCAAAGCAATGGTCAGTGA...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATTTCTCGGCCTTTAATTaGCGTCCAGGAGGCATAACC +
Preference number: 5 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYFSAFN*RPGGIT
Trigger: GGTTATGCCTCCTGGACGCAAATTAAAGGCCGAGAA...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp TGCAAACAAGTTCAGATGGCAAGGGATACGATAAGACCTGGAGCTTATCTTCGGAGAGAATCCATAGTATaGGCTTCAAATTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: CKQVQMARDTIRPGAYLRRESIV*ASNSSD
Trigger: GTCAGAGGAATTTGAAGCCAATACTATGGATTCTCT...CCGAAGATAAGCTCCAGGTCTTATCGTATCCCTTGCCATCTGAACTTGTTTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS GCA 90 bp ATCACTGACCATTGCTTTGGCCAGTCGCTCATCTTGTTGTATTATTaGATTCTGCAGGATCTTAATTCCTTTTATAATCTGTGGGGAGGG +
Preference number: 5 (lower is better)
Translates to: ITDHCFGQSLILLYY*ILQDLNSFYNLWGG
Trigger: CCCTCCCCACAGATTATAAAAGGAATTAAGATCCTGCAGAATGCAATAATACAACAAGATGAGCGACTGGCCAAAGCAATGGTCAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535150.1
CDS-3UTR CAA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAACGGGCTCATTTCCTGTaGTTCTCATTGTCATTGCCA +
Preference number: 5 (lower is better)
Translates to: VFQDALSNRSSANKFRWQRAHFL*FSLSLP
Trigger: TGGCAATGACAATGAGAACAACAGGAAATGAGCCCG...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACTTCTCGGCCTTTAATTaGCGTCCAGGAGGCATAACC +
Preference number: 5 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNFSAFN*RPGGIT
Trigger: GGTTATGCCTCCTGGACGCAAATTAAAGGCCGAGAA...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp TTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACATTCCTCACCAAATGTaGGTTTGCTGTTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: LLIPHQMLVCCCADTIRNIPHQM*VCCCAD
Trigger: GTCTGCACAACAGCAAACCAACATTTGGTGAGGAAT...GTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CAA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCGGCCAGTCGCTCATCTaGTTGTATTATTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFGQSLI*LYYCIL
Trigger: CAGAATGCAATAATACAACAAGATGAGCGACTGGCC...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp TTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACCTGAAAGATGGTCTTTaGGAAACCTTGAAGAGCGAC +
Preference number: 5 (lower is better)
Translates to: LLIPHQMLVCCCADTIRNLKDGL*ETLKSD
Trigger: GTCGCTCTTCAAGGTTTCCAAAAGACCATCTTTCAG...GTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537868.5
CDS-3UTR CAA 90 bp ATAAAGATCACACTGCATAGCAACAGCACACTTAGGACAAACATGAAACATTATTTCTCGGCCTTTAATTaGCGTCCAGGAGGCATAACC +
Preference number: 5 (lower is better)
Translates to: IKITLHSNSTLRTNMKHYFSAFN*RPGGIT
Trigger: GGTTATGCCTCCTGGACGCAAATTAAAGGCCGAGAA...ATAATGTTTCATGTTTGTCCTAAGTGTGCTGTTGCTATGCAGTGTGATCTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATAATGGCAGTATTCCATaGATGGCAAGGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYNGSIP*MARPLS
Trigger: AGAAAGAGGCCTTGCCATCAATGGAATACTGCCATT...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp CCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTAATGTTGGTTTGCTGTaGTGCAGACACTATCAGAAA +
Preference number: 5 (lower is better)
Translates to: PHQMLVCCCADTIRNFFGNVGLL*CRHYQK
Trigger: TTTCTGATAGTGTCTGCACAACAGCAAACCAACATT...ACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CAA 90 bp CTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTCACCAAATGTTGGTTaGCTGTTGTGCAGACACTAT +
Preference number: 5 (lower is better)
Translates to: LIPHQMLVCCCADTIRNFSPNVG*LLCRHY
Trigger: ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGA...GAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CAA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAAATTCCTCACCAAATGTaGGTTTGCTGTTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: VFQDALSNRSSANKFRWQIPHQM*VCCCAD
Trigger: GTCTGCACAACAGCAAACCAACATTTGGTGAGGAAT...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp AAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCATTCCTCACCAAATGTaGGTTTGCTGTTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: KCWFAVVQTLSETSLVFTIPHQM*VCCCAD
Trigger: GTCTGCACAACAGCAAACCAACATTTGGTGAGGAAT...GGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CAA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTCAACTGGGTATATCCTaGCTGTATCTCTGTAGGACT +
Preference number: 5 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSQLGIS*LYLCRT
Trigger: AGTCCTACAGAGATACAGCAAGGATATACCCAGTTG...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS-3UTR CAA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTCGTTCTTTTCACCACTaGACCAACTGGGTATATCCT +
Preference number: 5 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSRSFHH*TNWVYP
Trigger: AGGATATACCCAGTTGGTCAAGTGGTGAAAAGAACG...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS TCA 90 bp TTTACTTCATCTTCATTTAATAATTGCATCACCAGCAGGGTAATATaGAAGGAACCATCACTGACCATTGCTTTGGCCAGTCGCTCATCT +
Preference number: 5 (lower is better)
Translates to: FTSSSFNNCITSRVI*KEPSLTIALASRSS
Trigger: AGATGAGCGACTGGCCAAAGCAATGGTCAGTGATGGTTCCTTTCATATTACCCTGCTGGTGATGCAATTATTAAATGAAGATGAAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000431975.7
ENST00000535150.1
ENST00000541650.5
ENST00000543815.5
ENST00000683794.1
CDS CCA 90 bp TTCATCAGTGATTCCACAGTCATCCTGAATATCTACAGTAGCAAATaGCATGTCTACCAGAGAATCCATAGTATTGGCTTCAAATTCCTC +
Preference number: 5 (lower is better)
Translates to: FISDSTVILNIYSSK*HVYQRIHSIGFKFL
Trigger: GAGGAATTTGAAGCCAATACTATGGATTCTCTGGTAGACATGCCATTTGCTACTGTAGATATTCAGGATGACTGTGGAATCACTGATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366358.2
ENST00000431975.7
ENST00000541650.5
ENST00000683794.1
CDS-3UTR CAA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAAGGCAATCTTCACAGATaGCACCAGAGAAACTTAACT +
Preference number: 5 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQGNLHR*HQRNLT
Trigger: AGTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCC...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp TGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGGGCAATCTTCACAGATaGCACCAGAGAAACTTAACT +
Preference number: 5 (lower is better)
Translates to: CFSNANTSIMKSIRQSSQGNLHR*HQRNLT
Trigger: AGTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCC...CTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CAA 90 bp CTGTTGTGTTTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTGGCAATCTTCACAGATaGCACCAGAGAAACTTAACT +
Preference number: 5 (lower is better)
Translates to: LLCFSNANTSIMKSIRQSGNLHR*HQRNLT
Trigger: AGTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCC...AGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAAACACAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CAA 90 bp ACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAATGGCAGTATTCCATaGATGGCAAGGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: TSIMKSIRQSSQIAPEKLNGSIP*MARPLS
Trigger: AGAAAGAGGCCTTGCCATCAATGGAATACTGCCATT...AAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTAATGGCAGTATTCCATaGATGGCAAGGCCTCTTTCT +
Preference number: 5 (lower is better)
Translates to: FSNANTSIMKSIRQSSQINGSIP*MARPLS
Trigger: AGAAAGAGGCCTTGCCATCAATGGAATACTGCCATT...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAAATGTTGGTTTGCTGTaGTGCAGACACTATCAGAAA +
Preference number: 5 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQNVGLL*CRHYQK
Trigger: TTTCTGATAGTGTCTGCACAACAGCAAACCAACATT...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATTCACCAAATGTTGGTTaGCTGTTGTGCAGACACTAT +
Preference number: 5 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYSPNVG*LLCRHY
Trigger: ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGA...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CAA 90 bp ATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAATCACCAAATGTTGGTTaGCTGTTGTGCAGACACTAT +
Preference number: 5 (lower is better)
Translates to: MLVCCCADTIRNFFGVYQSPNVG*LLCRHY
Trigger: ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGA...TTGGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CAA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTATTCCTCACCAAATGTaGGTTTGCTGTTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLIIPHQM*VCCCAD
Trigger: GTCTGCACAACAGCAAACCAACATTTGGTGAGGAAT...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CAA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTATTCCTCACCAAATGTaGGTTTGCTGTTGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLIPHQM*VCCCAD
Trigger: GTCTGCACAACAGCAAACCAACATTTGGTGAGGAAT...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000537868.5
ENST00000541650.5
CDS-3UTR CAA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTGGCCAGTCGCTCATCTaGTTGTATTATTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLGQSLI*LYYCIL
Trigger: CAGAATGCAATAATACAACAAGATGAGCGACTGGCC...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp ATCATCATACCGGGGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAAAAAGTACCAATCCCTaGAAAGGGCAAAGTCAAATG +
Preference number: 5 (lower is better)
Translates to: IIIPGKFFKMLFQTEAVQKSTNP*KGQSQM
Trigger: CATTTGACTTTGCCCTTTCAAGGGATTGGTACTTTT...TTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCCCCGGTATGATGAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp AAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCCTTGAAATGTCCTATTaGCAGTCTCTGCTATCTCCA +
Preference number: 5 (lower is better)
Translates to: KCWFAVVQTLSETSLVFTLEMSY*QSLLSP
Trigger: TGGAGATAGCAGAGACTGCAAATAGGACATTTCAAG...GGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGGCAATCTTCACAGATaGCACCAGAGAAACTTAACT +
Preference number: 5 (lower is better)
Translates to: FSNANTSIMKSIRQSSQIGNLHR*HQRNLT
Trigger: AGTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCC...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CAA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGTCCATTTTTCTTCTGTaGTGTTTCAGCAATGCGAAC +
Preference number: 5 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMSIFLL*CFSNAN
Trigger: GTTCGCATTGCTGAAACACAACAGAAGAAAAATGGA...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp GGAAGTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGAATGTTGGTTTGCTGTaGTGCAGACACTATCAGAAA +
Preference number: 5 (lower is better)
Translates to: GSFSRCSFKQKQCKQVQMNVGLL*CRHYQK
Trigger: TTTCTGATAGTGTCTGCACAACAGCAAACCAACATT...CATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAACTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAAAATGTTGGTTTGCTGTaGTGCAGACACTATCAGAAA +
Preference number: 5 (lower is better)
Translates to: VFQDALSNRSSANKFRWQNVGLL*CRHYQK
Trigger: TTTCTGATAGTGTCTGCACAACAGCAAACCAACATT...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATAGAGAATCCATAGTATaGGCTTCAAATTCCTCTGAC +
Preference number: 5 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYRESIV*ASNSSD
Trigger: GTCAGAGGAATTTGAAGCCAATACTATGGATTCTCT...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp AAATGTTGGTTTGCTGTTGTGCAGACACTATCAGAAACTTCTTTGGTGTTTACCAAAAGTACCAATCCCTaGAAAGGGCAAAGTCAAATG +
Preference number: 5 (lower is better)
Translates to: KCWFAVVQTLSETSLVFTKSTNP*KGQSQM
Trigger: CATTTGACTTTGCCCTTTCAAGGGATTGGTACTTTT...GGTAAACACCAAAGAAGTTTCTGATAGTGTCTGCACAACAGCAAACCAACATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp ACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTCTTGAAATGTCCTATTaGCAGTCTCTGCTATCTCCA +
Preference number: 5 (lower is better)
Translates to: TSIMKSIRQSSQIAPEKLLEMSY*QSLLSP
Trigger: TGGAGATAGCAGAGACTGCAAATAGGACATTTCAAG...AAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431975.7
CDS-3UTR CAA 90 bp GTTTTTCAAGATGCTCTTTCAAACAGAAGCAGTGCAAACAAGTTCAGATGGCAACAGGATGCCTTTTTCTaGAAATGTCCTATTTGCAGT +
Preference number: 5 (lower is better)
Translates to: VFQDALSNRSSANKFRWQQDAFF*KCPICS
Trigger: ACTGCAAATAGGACATTTCAAGAAAAAGGCATCCTG...TTGCCATCTGAACTTGTTTGCACTGCTTCTGTTTGAAAGAGCATCTTGAAAAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCAGGATGCCTTTTTCTaGAAATGTCCTATTTGCAGT +
Preference number: 5 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYQDAFF*KCPICS
Trigger: ACTGCAAATAGGACATTTCAAGAAAAAGGCATCCTG...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTTCCATTTTTCTTCTGTaGTGTTTCAGCAATGCGAAC +
Preference number: 5 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLISIFLL*CFSNAN
Trigger: GTTCGCATTGCTGAAACACAACAGAAGAAAAATGGA...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp TCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTAACTCCATTTTTCTTCTGTaGTGTTTCAGCAATGCGAAC +
Preference number: 5 (lower is better)
Translates to: SIMKSIRQSSQIAPEKLNSIFLL*CFSNAN
Trigger: GTTCGCATTGCTGAAACACAACAGAAGAAAAATGGA...GTTAAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS-3UTR CAA 90 bp TTCAGCAATGCGAACACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTAATGTTGGTTTGCTGTaGTGCAGACACTATCAGAAA +
Preference number: 5 (lower is better)
Translates to: FSNANTSIMKSIRQSSQINVGLL*CRHYQK
Trigger: TTTCTGATAGTGTCTGCACAACAGCAAACCAACATT...AATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGTGTTCGCATTGCTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
CDS-3UTR CAA 90 bp CAAGAAATTGCTAATTCCTCACCAAATGTTGGTTTGCTGTTGTGCAGACACTATCCTTTTATAATCTCTTaGTTGGTGATTGGAATGGAC +
Preference number: 5 (lower is better)
Translates to: QEIANSSPNVGLLLCRHYPFIIS*LVIGMD
Trigger: GTCCATTCCAATCACCAACAAAGAGATTATAAAAGG...ATAGTGTCTGCACAACAGCAAACCAACATTTGGTGAGGAATTAGCAATTTCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS-3UTR CAA 90 bp CTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTTTGATTACATTTTCACACTCATaGGAATTAATTCCCGCTTCG +
Preference number: 5 (lower is better)
Translates to: LIKSNTRCRHTWTTLLLITFSHS*ELIPAS
Trigger: CGAAGCGGGAATTAATTCCAATGAGTGTGAAAATGT...AATCAAAAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541650.5
CDS TCA 90 bp CTTGAAAGGGCAAAGTCAAATGTTTTCCCTGGAGGAGTTCTTCTATaGATGGTTTCAATTCCAAAAGAGCATCAATACCAATGTTTACTT +
Preference number: 5 (lower is better)
Translates to: LERAKSNVFPGGVLL*MVSIPKEHQYQCLL
Trigger: AAGTAAACATTGGTATTGATGCTCTTTTGGAATTGAAACCATTCATAGAAGAACTCCTCCAGGGAAAACATTTGACTTTGCCCTTTCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431975.7
ENST00000541650.5
ENST00000543815.5
ENST00000683794.1
CDS-3UTR CAA 90 bp ACATCGATCATGAAAAGTATTAGGCAATCTTCACAGATTGCACCAGAGAAACTTGTTCTGTCTGGCTATTaGCATATGTCTTTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: TSIMKSIRQSSQIAPEKLVLSGY*HMSLRK
Trigger: CTTTCTTAAAGACATATGCAAATAGCCAGACAGAAC...AAGTTTCTCTGGTGCAATCTGTGAAGATTGCCTAATACTTTTCATGATCGATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS-3UTR CAA 90 bp CAAATTCTCATTAAAAGTAACACTAGATGTAGACACACCTGGACAACGCTTCTTCCTTTTATAATCTCTTaGTTGGTGATTGGAATGGAC +
Preference number: 5 (lower is better)
Translates to: QILIKSNTRCRHTWTTLLPFIIS*LVIGMD
Trigger: GTCCATTCCAATCACCAACAAAGAGATTATAAAAGG...AAGAAGCGTTGTCCAGGTGTGTCTACATCTAGTGTTACTTTTAATGAGAATTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431975.7
ENST00000541650.5
CDS CAA 90 bp CGAGCACACCCTGCCTTTTTCACTCCACGGAGCAGCACAGGCAGCTaGAAGAGCCAATGCACACGCCGCCGGGGGAGAGAAAGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: RAHPAFFTPRSSTGS*KSQCTRRRGRERRR
Trigger: CCTTCTCCTTTCTCTCCCCCGGCGGCGTGTGCATTGGCTCTTCAAGCTGCCTGTGCTGCTCCGTGGAGTGAAAAAGGCAGGGTGTGCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS GCA 72 bp ACTCCACGGAGCAGCACAGGCAGCTTGAAGAGCCAATaGACACGCCGCCGGGGGAGAGAAAGGAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: TPRSSTGSLKSQ*TRRRGRERRRE
Trigger: TTCCCTTCTCCTTTCTCTCCCCCGGCGGCGTGTGCATTGGCTCTTCAAGCTGCCTGTGCTGCTCCGTGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS CCA 72 bp CTCCACCTCCAGTCCTCCAGCCTAATGCAACTGCTCTaGGACTGGCATTCAGTGAAGGAAGTGGCTATACGC +
Preference number: 6 (lower is better)
Translates to: LHLQSSSLMQLL*DWHSVKEVAIR
Trigger: GCGTATAGCCACTTCCTTCACTGAATGCCAGTCCCAGAGCAGTTGCATTAGGCTGGAGGACTGGAGGTGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS CAA 90 bp GGCTCCCCTCCGTTCTTTTCACCACTTGACCAACTGGGTATATCCTaGCTGTATCTCTGTAGGACTGCAGAGGACGAGCTTTCCAACTCA +
Preference number: 6 (lower is better)
Translates to: GSPPFFSPLDQLGIS*LYLCRTAEDELSNS
Trigger: TGAGTTGGAAAGCTCGTCCTCTGCAGTCCTACAGAGATACAGCAAGGATATACCCAGTTGGTCAAGTGGTGAAAAGAACGGAGGGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS TCA 72 bp GAAGTGGCTATACGCTCCCGTATTCTCACAAAACTGTaGGTCCCTGGCCATAGGTCAGTGCCATGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: EVAIRSRILTKL*VPGHRSVPCVL
Trigger: CAGAACACATGGCACTGACCTATGGCCAGGGACTCACAGTTTTGTGAGAATACGGGAGCGTATAGCCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS GCA 72 bp AAATTGCAGTTTATAGCACAGTCTGCGAGCACACCCTaGCTTTTTCACTCCACGGAGCAGCACAGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: KLQFIAQSASTP*LFHSTEQHRQL
Trigger: AAGCTGCCTGTGCTGCTCCGTGGAGTGAAAAAGGCAGGGTGTGCTCGCAGACTGTGCTATAAACTGCAATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS CAA 90 bp GGCTTGTTTTTATTCTGTGTTTCCTCCAGATACTGCTGGACAGCCTaGAGCACCGCGTTCTCCACCAGCCTCTTACTGAGCCTTACTAGT +
Preference number: 6 (lower is better)
Translates to: GLFLFCVSSRYCWTA*STAFSTSLLLSLTS
Trigger: ACTAGTAAGGCTCAGTAAGAGGCTGGTGGAGAACGCGGTGCTCAAGGCTGTCCAGCAGTATCTGGAGGAAACACAGAATAAAAACAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS GCA 72 bp GGACCCCAAATAGAAATTGCAGTTTATAGCACAGTCTaGGAGCACACCCTGCCTTTTTCACTCCACGGAGCA +
Preference number: 6 (lower is better)
Translates to: GPQIEIAVYSTV*EHTLPFSLHGA
Trigger: TGCTCCGTGGAGTGAAAAAGGCAGGGTGTGCTCGCAGACTGTGCTATAAACTGCAATTTCTATTTGGGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS GCA 72 bp CGTTCCGGGCTCATTTCCTGTTGTTCTCATTGTCATTaGCATTCTGATCAGCTGCTTCGGTTTTCACAGAGC +
Preference number: 6 (lower is better)
Translates to: RSGLISCCSHCH*HSDQLLRFSQS
Trigger: GCTCTGTGAAAACCGAAGCAGCTGATCAGAATGGCAATGACAATGAGAACAACAGGAAATGAGCCCGGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263050.3
ENST00000342266.4
ENST00000431975.7
ENST00000474850.2
CDS CAA 72 bp CCGTTCTTTTCACCACTTGACCAACTGGGTATATCCTaGCTGTATCTCTGTAGGACTGCAGAGGACGAGCTT +
Preference number: 6 (lower is better)
Translates to: PFFSPLDQLGIS*LYLCRTAEDEL
Trigger: AAGCTCGTCCTCTGCAGTCCTACAGAGATACAGCAAGGATATACCCAGTTGGTCAAGTGGTGAAAAGAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS GCA 72 bp CGTTCTTTTCACCACTTGACCAACTGGGTATATCCTTaGTGTATCTCTGTAGGACTGCAGAGGACGAGCTTT +
Preference number: 6 (lower is better)
Translates to: RSFHHLTNWVYP*CISVGLQRTSF
Trigger: AAAGCTCGTCCTCTGCAGTCCTACAGAGATACAGCAAGGATATACCCAGTTGGTCAAGTGGTGAAAAGAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474850.2
CDS TCA 72 bp ACTGGTCCTGTCTGTCTTTCCTGGTGTTCTTCTCCGTaGGGACCCCAAATAGAAATTGCAGTTTATAGCACA +
Preference number: 6 (lower is better)
Translates to: TGPVCLSWCSSP*GPQIEIAVYST
Trigger: TGTGCTATAAACTGCAATTTCTATTTGGGGTCCTCACGGAGAAGAACACCAGGAAAGACAGACAGGACCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000342266.4
ENST00000474850.2
CDS GCA 72 bp TTCTCACAAAACTGTGAGTCCCTGGCCATAGGTCAGTaGCATGTGTTCTGTCTGGCTATTTGCATATGTCTT +
Preference number: 6 (lower is better)
Translates to: FSQNCESLAIGQ*HVFCLAICICL
Trigger: AAGACATATGCAAATAGCCAGACAGAACACATGGCACTGACCTATGGCCAGGGACTCACAGTTTTGTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS CAA 72 bp GGCCATAGGTCAGTGCCATGTGTTCTGTCTGGCTATTaGCATATGTCTTTAAGAAAGGTAGTCGAGAAAAAC +
Preference number: 6 (lower is better)
Translates to: GHRSVPCVLSGY*HMSLRKVVEKN
Trigger: GTTTTTCTCGACTACCTTTCTTAAAGACATATGCAAATAGCCAGACAGAACACATGGCACTGACCTATGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000342266.4
CDS CAA 72 bp CACAAATCCAACCTGATTTCCAAAAGTACCAATCCCTaGAAAGGGCAAAGTCAAATGTTTTCCCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: HKSNLISKSTNP*KGQSQMFSLEE
Trigger: CTCCTCCAGGGAAAACATTTGACTTTGCCCTTTCAAGGGATTGGTACTTTTGGAAATCAGGTTGGATTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431975.7
ENST00000541650.5
ENST00000543815.5
ENST00000683794.1
CDS CAA 90 bp TGCCAGCTTCACAAATCCAACCTGATTTCCAAAAGTACCAATCCCTaGAAAGGGCAAAGTCAAATGTTTTCCCTGGAGGAGTTCTTCTAT +
Preference number: 6 (lower is better)
Translates to: CQLHKSNLISKSTNP*KGQSQMFSLEEFFY
Trigger: ATAGAAGAACTCCTCCAGGGAAAACATTTGACTTTGCCCTTTCAAGGGATTGGTACTTTTGGAAATCAGGTTGGATTTGTGAAGCTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431975.7
ENST00000541650.5
ENST00000543815.5
ENST00000683794.1
CDS TCA 72 bp AAACTTCTGCTCTCTCCTACCAGGATGCCTTTTTCTTaGAATGTCCTATTTGCAGTCTCTGCTATCTCCAAA +
Preference number: 6 (lower is better)
Translates to: KLLLSPTRMPFS*NVLFAVSAISK
Trigger: TTTGGAGATAGCAGAGACTGCAAATAGGACATTTCAAGAAAAAGGCATCCTGGTAGGAGAGAGCAGAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000431975.7
ENST00000541650.5
ENST00000683794.1
CDS CCA 72 bp GATTCCACAGTCATCCTGAATATCTACAGTAGCAAATaGCATGTCTACCAGAGAATCCATAGTATTGGCTTC +
Preference number: 6 (lower is better)
Translates to: DSTVILNIYSSK*HVYQRIHSIGF
Trigger: GAAGCCAATACTATGGATTCTCTGGTAGACATGCCATTTGCTACTGTAGATATTCAGGATGACTGTGGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366358.2
ENST00000431975.7
ENST00000541650.5
ENST00000683794.1
CDS TCA 72 bp AAATGTCCTATTTGCAGTCTCTGCTATCTCCAAAAGTaGGTTTACATGATCTCCTTCTGCCAGCTTCACAAA +
Preference number: 6 (lower is better)
Translates to: KCPICSLCYLQK*VYMISFCQLHK
Trigger: TTTGTGAAGCTGGCAGAAGGAGATCATGTAAACTCACTTTTGGAGATAGCAGAGACTGCAAATAGGACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431975.7
ENST00000541650.5
ENST00000683794.1
CDS TCA 72 bp GCAAAGTCAAATGTTTTCCCTGGAGGAGTTCTTCTATaGATGGTTTCAATTCCAAAAGAGCATCAATACCAA +
Preference number: 6 (lower is better)
Translates to: AKSNVFPGGVLL*MVSIPKEHQYQ
Trigger: TTGGTATTGATGCTCTTTTGGAATTGAAACCATTCATAGAAGAACTCCTCCAGGGAAAACATTTGACTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000431975.7
ENST00000541650.5
ENST00000543815.5
ENST00000683794.1
CDS GCA 72 bp CATTGCTTTGGCCAGTCGCTCATCTTGTTGTATTATTaGATTCTGCAGGATCTTAATTCCTTTTATAATCTC +
Preference number: 6 (lower is better)
Translates to: HCFGQSLILLYY*ILQDLNSFYNL
Trigger: GAGATTATAAAAGGAATTAAGATCCTGCAGAATGCAATAATACAACAAGATGAGCGACTGGCCAAAGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366358.2
ENST00000431975.7
ENST00000541650.5
ENST00000543815.5
ENST00000683794.1
CDS GCA 72 bp CATTGCTTTGGCCAGTCGCTCATCTTGTTGTATTATTaGATTCTGCAGGATCTTAATTCCTTTTATAATCTG +
Preference number: 6 (lower is better)
Translates to: HCFGQSLILLYY*ILQDLNSFYNL
Trigger: CAGATTATAAAAGGAATTAAGATCCTGCAGAATGCAATAATACAACAAGATGAGCGACTGGCCAAAGCAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535150.1
CDS CAA 72 bp AAAACTTCTGCTCTCTCCTACCAGGATGCCTTTTTCTaGAAATGTCCTATTTGCAGTCTATGTTTACTTCAT +
Preference number: 6 (lower is better)
Translates to: KTSALSYQDAFF*KCPICSLCLLH
Trigger: ATGAAGTAAACATAGACTGCAAATAGGACATTTCAAGAAAAAGGCATCCTGGTAGGAGAGAGCAGAAGTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535150.1