RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000111254

Ensembl transcript IDs: ENST00000228850.6, ENST00000536414.3, ENST00000540967.5, ENST00000541484.1, ENST00000544636.1, ENST00000545990.6

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGAATGTTAGGGCTCTGTaGGGATATAGAGGGGGAGAT +
Preference number: 2 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLNVRAL*GYRGGD
Trigger: ATCTCCCCCTCTATATCCTCACAGAGCCCTAACATT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
3UTR-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGAATGTTAGGGCTCTGTaGGGATATAGAGGGGGAGAT +
Preference number: 2 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVNVRAL*GYRGGD
Trigger: ATCTCCCCCTCTATATCCTCACAGAGCCCTAACATT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
3UTR TCA 72 bp CAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATaGCATGTCTTTGATGAGAGTGGTGTGAAGATAATG +
Preference number: 3 (lower is better)
Translates to: QENLQNPVASTR*HVFDESGVKIM
Trigger: CATTATCTTCACACCACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCTCCCGTTGCCAAGTTaGGCCCTGGGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLPLPS*ALGPWQ
Trigger: TTGCCAGGGCCCCAGGGCCCAACTTGGCAACGGGAG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGCAGCTGCAGCGGTGTaGCATTCCCCACCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRAAAAV*HSPPPH
Trigger: ATGAGGCGGTGGGGAATGTCACACCGCTGCAGCTGC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCATGTACCTCCCCCTTaGTGGGACAGGGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRHVPPP*WDRAAS
Trigger: GCTGGCAGCCCTGTCCCAGCAAGGGGGAGGTACATG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228850.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCTACTGAACTCCCGTTaGCAAGTTGGGCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLLNSR*QVGPWG
Trigger: GCCCCAGGGCCCAACTTGGCAACGGGAGTTCAGTAG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGAGCCAGTCCAGCAGCTaGAGCGGTGTGACATTCCCC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRSQSSS*SGVTFP
Trigger: GGGGAATGTCACACCGCTGCAGCTGCTGGACTGGCT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGGCCATCTATCTGGCTaGCAGCCATCTTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRGHLSG*QPSWSA
Trigger: GGCTGACCAAGATGGCTGTCAGCCAGATAGATGGCC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGCCAGGAGCCTTGTCTaGGGCAGCATTCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRARSLV*GSIPGT
Trigger: TGTTCCAGGAATGCTGCCCCAGACAAGGCTCCTGGC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGCAGCAGCTGAGAGCTaGAGTAGCTTCTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRAAAES*SSFSWI
Trigger: GATCCAGGAGAAGCTACTTCAGCTCTCAGCTGCTGC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCTGGGGCAGCATTCCTaGAACATGCAGAGACGGTCT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLGQHS*NMQRRS
Trigger: AGACCGTCTCTGCATGTTCCAGGAATGCTGCCCCAG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTCAACGAAGCTCCGTaGATCCCTTCTTCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFNEAP*IPSSSL
Trigger: CAGGGAGGAAGAAGGGATGCACGGAGCTTCGTTGAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGTCCCTGTGACGCTGTaGAGATTCCTCAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRVPVTL*RFLKKE
Trigger: CTCCTTCTTGAGGAATCTCCACAGCGTCACAGGGAC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCCTATCTTCCTTAACTaGCTGTTCCGGCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRPIFLN*LFRHLG
Trigger: CCCAAGGTGCCGGAACAGCCAGTTAAGGAAGATAGG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTCAGGGGGCTGTCCTaGTGTGCCTCTCATTTCATT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFRGLS*CASHFI
Trigger: AATGAAATGAGAGGCACATCAGGACAGCCCCCTGAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGCAATCTTTCTGGAGTaGCCTTGGTGGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRAIFLE*PWWWCC
Trigger: ACAACACCACCACCAAGGGCACTCCAGAAAGATTGC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGAAACCGTCGTTTCTTaGTTAGCGCTTGCGCAGACA +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRETVVS*LALAQT
Trigger: TGTCTGCGCAAGCGCTAACCAAGAAACGACGGTTTC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228850.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCATTGGCAGGAAAGTTaGTGGTGCCAGCAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRHWQES*WCQQLQ
Trigger: TTGAAGCTGCTGGCACCACCAACTTTCCTGCCAATG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTGGGTTCAGGGCTCTaGTCACGCTTGAAAATGGTC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLGSGL*SRLKMV
Trigger: GACCATTTTCAAGCGTGACCAGAGCCCTGAACCCAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGATGTGGCCATCTATCTaGCTGACAGCCATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRMWPSI*LTAILV
Trigger: GACCAAGATGGCTGTCAGCCAGATAGATGGCCACAT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGAAGAGGGGAAAGCAGTaGGGTTGCCGATTACAGGTT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRKRGKQ*GCRLQV
Trigger: AACCTGTAATCGGCAACCCCACTGCTTTCCCCTCTT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCTCAAAGGAAATGTCTaGTGCAGGCTTACGCTGTGT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLKGNV*CRLTLC
Trigger: ACACAGCGTAAGCCTGCATCAGACATTTCCTTTGAG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTGGAGTTGCTTGTTCTaGACTGTGTCCGTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRWSCLF*TVSVRL
Trigger: CAACCTAACGGACACAGTTCAGAACAAGCAACTCCA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGAATGTTAGGGCTCTGTaGGGATATAGAGGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRNVRAL*GYRGGD
Trigger: ATCTCCCCCTCTATATCCTCACAGAGCCCTAACATT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTCTACCTCGGGTCTTaGCATTTTGCATGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFYLGS*HFACPE
Trigger: CTCAGGACATGCAAAATGGCAAGACCCGAGGTAGAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTGCTGGGACAGGGCTaGCAGCTTAGCTTACATTTT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLLGQG*QLSLHF
Trigger: AAAATGTAAGCTAAGCTGGCAGCCCTGTCCCAGCAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000228850.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGAGCATTCCTGGAACATaGAGAGACGGTCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRSIPGT*RDGLIH
Trigger: GTGAATGAGACCGTCTCTGCATGTTCCAGGAATGCT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGATGATTCTCCGGGTTTaGACCGAACATCTTGGAACT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRMILRV*TEHLGT
Trigger: AGTTCCAAGATGTTCGGTTCAAACCCGGAGAATCAT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCTCATTCACAAGCTCTaGTGCTATCTTACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLIHKL*CYLTEA
Trigger: AGCCTCAGTAAGATAGCATCAGAGCTTGTGAATGAG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCTTTGGTGCTCTCCTTaGTCTTCAAAGTGGACTTGT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLWCSP*SSKWTC
Trigger: ACAAGTCCACTTTGAAGATCAAGGAGAGCACCAAAG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGCCTTTTGGCTTCCATaGGAGAAGACAGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRAFWLP*EKTVLF
Trigger: GAAAAGAACTGTCTTCTCTCATGGAAGCCAAAAGGC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTCCTTTCATGGAGATaGGGGAATAACTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFLSWR*GNNSQP
Trigger: AGGCTGAGAGTTATTCCCTCATCTCCATGAAAGGAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCTCGGCCCAGGAGTCTaGATCATACATAAAATTCTC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLGPGV*IIHKIL
Trigger: GAGAATTTTATGTATGATTCAGACTCCTGGGCCGAG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGACCACCTCTTTTGCATaGTTGAGCAGAACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRTTSFA*LSRTFF
Trigger: GAAGAAGGTTCTGCTCAAGCATGCAAAAGAGGTGGT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTCTTCAGTGTCTTCATaGTGGAGACCATCATATCAG +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRSSVSS*WRPSYQ
Trigger: CTGATATGATGGTCTCCATCATGAAGACACTGAAGA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGACACAGCTTCATCACTaGGTTCATCAGATGTTCTAC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRTQLHH*VHQMFY
Trigger: GTAGAACATCTGATGAACTCAGTGATGAAGCTGTGT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTTTACGTCCTTGCTTaGATGGACAGGAAAATCTGC +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFYVLA*MDRKIC
Trigger: GCAGATTTTCCTGTCCATGCAAGCAAGGACGTAAAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGATCTGCAAAATCCAGTaGCTAGCACAAGATGACATG +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRICKIQ*LAQDDM
Trigger: CATGTCATCTTGTGCTAGCCACTGGATTTTGCAGAT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGACGTCCTTGCTTGCATaGACAGGAAAATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRTSLLA*TGKSAK
Trigger: TTTTGCAGATTTTCCTGTCCATGCAAGCAAGGACGT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGTTGTGTCTTTCACTTaGATCTTCAGTGTCTTCATG +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRVVSFT*IFSVFM
Trigger: CATGAAGACACTGAAGATCCAAGTGAAAGACACAAC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTACATTCTTTCTGCTaGGTTTTATGCCACAAGGTA +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLHSFC*VLCHKV
Trigger: TACCTTGTGGCATAAAACTCAGCAGAAAGAATGTAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTCAAATGCTGCATGCTaGAAACCTAGAGATTTACAT +
Preference number: 4 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRSNAAC*KPRDLH
Trigger: ATGTAAATCTCTAGGTTTCCAGCATGCAGCATTTGA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCTCCCGTTGCCAAGTTaGGCCCTGGGGCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLPLPS*ALGPWQ
Trigger: TTGCCAGGGCCCCAGGGCCCAACTTGGCAACGGGAG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGCAGCTGCAGCGGTGTaGCATTCCCCACCGCCTCAT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVAAAAV*HSPPPH
Trigger: ATGAGGCGGTGGGGAATGTCACACCGCTGCAGCTGC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGAATCACCGTGGGTGCTaGACACCCTTCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLNHRGC*TPFRGL
Trigger: CAGCCCCCTGAAGGGTGTGCAGCACCCACGGTGATT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGACAATCACCGTGGGTaGTGCACACCCTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLDNHRG*CTPFRG
Trigger: CCCCCTGAAGGGTGTGCAGCACCCACGGTGATTGTC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGTACCTCCCCCTTGCTaGGACAGGGCTGCCAGCTTA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLVPPPC*DRAASL
Trigger: TAAGCTGGCAGCCCTGTCCCAGCAAGGGGGAGGTAC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000228850.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGCTGTTCCGGCACCTTaGGTTCAGGGCTCTGGTCAC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLAVPAP*VQGSGH
Trigger: GTGACCAGAGCCCTGAACCCAAGGTGCCGGAACAGC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGGCCATCTATCTGGCTaGCAGCCATCTTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLGHLSG*QPSWSA
Trigger: GGCTGACCAAGATGGCTGTCAGCCAGATAGATGGCC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGAATCACCGTGGGTGCTaGACACCCTTCAGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVNHRGC*TPFRGL
Trigger: CAGCCCCCTGAAGGGTGTGCAGCACCCACGGTGATT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGAGCCAGTCCAGCAGCTaGAGCGGTGTGACATTCCCC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVSQSSS*SGVTFP
Trigger: GGGGAATGTCACACCGCTGCAGCTGCTGGACTGGCT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGCCAGGAGCCTTGTCTaGGGCAGCATTCCTGGAACA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLARSLV*GSIPGT
Trigger: TGTTCCAGGAATGCTGCCCCAGACAAGGCTCCTGGC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTTGTGTGGGTCTCCTaGGTTGGACGTTTCCCCACC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFVWVS*VGRFPT
Trigger: GGTGGGGAAACGTCCAACTCAGGAGACCCACACAAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGAGGCAGCTACCCATTaGAGGACGGCTTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVEAATH*RTAWSC
Trigger: GCAACTCCAAGCCGTCCTTCAATGGGTAGCTGCCTC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGCAGCAGCTGAGAGCTaGAGTAGCTTCTCCTGGATC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLAAAES*SSFSWI
Trigger: GATCCAGGAGAAGCTACTTCAGCTCTCAGCTGCTGC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCTTCTGCTGACCCTGTaGCCTTGGCTGGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLLLTL*PWLVST
Trigger: AGTGCTTACCAGCCAAGGGCACAGGGTCAGCAGAAG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGAACCTCGCCCACACTaGATCCTTTGTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLEPRPH*ILCPQQ
Trigger: CTGCTGTGGACAAAGGATGCAGTGTGGGCGAGGTTC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCTGGGGCAGCATTCCTaGAACATGCAGAGACGGTCT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLGQHS*NMQRRS
Trigger: AGACCGTCTCTGCATGTTCCAGGAATGCTGCCCCAG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGAGAGTCAGGAAAGGTaGGCTCTTCTACCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVESQER*ALLPRV
Trigger: GACCCGAGGTAGAAGAGCTCACCTTTCCTGACTCTC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCTTCTGCTGACCCTGTaGCCTTGGCTGGTAAGCACT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLLLTL*PWLVST
Trigger: AGTGCTTACCAGCCAAGGGCACAGGGTCAGCAGAAG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGAACCTCGCCCACACTaGATCCTTTGTCCACAGCAG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVEPRPH*ILCPQQ
Trigger: CTGCTGTGGACAAAGGATGCAGTGTGGGCGAGGTTC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGTGGGTCTCCTGAGTTaGACGTTTCCCCACCAAATG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLVGLLS*TFPHQM
Trigger: CATTTGGTGGGGAAACGTCCAACTCAGGAGACCCAC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGTCCCTGTGACGCTGTaGAGATTCCTCAAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLVPVTL*RFLKKE
Trigger: CTCCTTCTTGAGGAATCTCCACAGCGTCACAGGGAC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCATCCTCATATAGCCTaGGGGGAGAAGACGCCAACG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVHPHIA*GEKTPT
Trigger: CGTTGGCGTCTTCTCCCCCCAGGCTATATGAGGATG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCGTTTCCCCACCAAATaGTTCTCCGGGTTTGAACCG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVRFPTK*FSGFEP
Trigger: CGGTTCAAACCCGGAGAATCATTTGGTGGGGAAACG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCTGATGCTATCTTACTaGGGCTTTTGGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLMLSY*GFWWVW
Trigger: CCACACCCACCAAAAGCCTCAGTAAGATAGCATCAG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTCAAGAAGGAGTCGATaGGATCCGAGACCACCTCTT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLSRRSR*DPRPPL
Trigger: AAGAGGTGGTCTCGGATCTCATCGACTCCTTCTTGA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTGTCTTGGGCTTTCCTaGCATGCTCAGGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLCLGLS*HAQGLS
Trigger: AGAAAGTCCCTGAGCATGTCAGGAAAGCCCAAGACA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTAGGTTGTGATTGCTaGCAATCACCGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLGCDC*QSPWVL
Trigger: CAGCACCCACGGTGATTGTCAGCAATCACAACCTAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGTGTCCGTTAGGTTGTaGTTGCTGACAATCACCGTG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLVSVRL*LLTITV
Trigger: CACGGTGATTGTCAGCAATCACAACCTAACGGACAC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTGGGCTTTCCTGACATaGTCAGGGACTTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLWAFLT*SGTFLA
Trigger: TGCCAAGAAAGTCCCTGAGCATGTCAGGAAAGCCCA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCAGGAAAGTTGGTGGTaGCAGCAGCTTCAACGAAGC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVQESWW*QQLQRS
Trigger: GCTTCGTTGAAGCTGCTGGCACCACCAACTTTCCTG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGTCATCTCCCAGCTCTaGCAACGAAGCATCACAGGA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVVISQL*QRSITG
Trigger: TCCTGTGATGCTTCGTTGGCAGAGCTGGGAGATGAC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGGAAAGCAGTGGGGTTaGCGATTACAGGTTCACCAT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLGKQWG*RLQVHH
Trigger: ATGGTGAACCTGTAATCGGCAACCCCACTGCTTTCC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCATGTACCTCCCCCTTaGTGGGAATTTTCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLHVPPP*WEFSGN
Trigger: GTTCCCTGAAAATTCCCAGCAAGGGGGAGGTACATG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTCTTGTTTCTTCCTGTaGCCTTCCATGTACCTCCCC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLSCFFL*PSMYLP
Trigger: GGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGGCTTTTGGTGGGTGTaGGTTCATTCCCCATGTACA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLGFWWV*VHSPCT
Trigger: TGTACATGGGGAATGAACCCACACCCACCAAAAGCC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTGGCAGGAAAGTTGGTaGTGCCAGCAGCTTCAACGA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVWQESW*CQQLQR
Trigger: TCGTTGAAGCTGCTGGCACCACCAACTTTCCTGCCA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCCTATCTTCCTTAACTaGCTGTTCCGGCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVPIFLN*LFRHLG
Trigger: CCCAAGGTGCCGGAACAGCCAGTTAAGGAAGATAGG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCTGACCCTGTGCCCTTaGCTGGTAAGCACTCATATA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLTLCP*LVSTHI
Trigger: TATATGAGTGCTTACCAGCCAAGGGCACAGGGTCAG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGAAGAGGGGAAAGCAGTaGGGTTGCCGATTACAGGTT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLKRGKQ*GCRLQV
Trigger: AACCTGTAATCGGCAACCCCACTGCTTTCCCCTCTT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGGAAACTTCATCTACTaGACTCCCGTTGCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLGNFIY*TPVAKL
Trigger: CAACTTGGCAACGGGAGTTCAGTAGATGAAGTTTCC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCTGATGCTATCTTACTaGGGCTTTTGGTGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLMLSY*GFWWVW
Trigger: CCACACCCACCAAAAGCCTCAGTAAGATAGCATCAG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTAGCATGGCATCCATaGTATCTGTGGCCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLAWHP*YLWPFG
Trigger: GCCAAAAGGCCACAGATATCATGGATGCCATGCTAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCTCAAAGGAAATGTCTaGTGCAGGCTTACGCTGTGT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLKGNV*CRLTLC
Trigger: ACACAGCGTAAGCCTGCATCAGACATTTCCTTTGAG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTTAGGTTGTGATTGCTaGCAATCACCGTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLGCDC*QSPWVL
Trigger: CAGCACCCACGGTGATTGTCAGCAATCACAACCTAA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTCTACCTCGGGTCTTaGCATTTTGCATGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFYLGS*HFACPE
Trigger: CTCAGGACATGCAAAATGGCAAGACCCGAGGTAGAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGCAATCTTTCTGGAGTaGCCTTGGTGGTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVAIFLE*PWWWCC
Trigger: ACAACACCACCACCAAGGGCACTCCAGAAAGATTGC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGAGCATTCCTGGAACATaGAGAGACGGTCTCATTCAC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLSIPGT*RDGLIH
Trigger: GTGAATGAGACCGTCTCTGCATGTTCCAGGAATGCT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCGAGACCACCTCTTTTaGATGCTTGAGCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLRDHLF*MLEQNL
Trigger: AAGGTTCTGCTCAAGCATGCAAAAGAGGTGGTCTCG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTGGGCTTTCCTGACATaGTCAGGGACTTTCTTGGCA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVWAFLT*SGTFLA
Trigger: TGCCAAGAAAGTCCCTGAGCATGTCAGGAAAGCCCA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGAGATGTTCTACCATCTaGCCACTCATGTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLRCSTI*PLMWPS
Trigger: AGATGGCCACATGAGTGGGCAGATGGTAGAACATCT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGGGGCTGTCCTGATGTaGCTCTCATTTCATTATGGA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLGAVLM*LSFHYG
Trigger: TCCATAATGAAATGAGAGGCACATCAGGACAGCCCC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGGAAAGCAGTGGGGTTaGCGATTACAGGTTCACCAT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVGKQWG*RLQVHH
Trigger: ATGGTGAACCTGTAATCGGCAACCCCACTGCTTTCC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTCTTGTTTCTTCCTGTaGCCTTCCATGTACCTCCCC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVSCFFL*PSMYLP
Trigger: GGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGAGTGCCCTTGGTGGTaGTGTTGTAATAGTCTACAG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLECPWW*CCNSLQ
Trigger: CTGTAGACTATTACAACACCACCACCAAGGGCACTC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCTGGAGTGCCCTTGGTaGTGGTGTTGTAATAGTCTA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLECPW*WCCNSL
Trigger: TAGACTATTACAACACCACCACCAAGGGCACTCCAG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCATTGGCAGGAAAGTTaGTGGTGCCAGCAGCTTCAA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVHWQES*WCQQLQ
Trigger: TTGAAGCTGCTGGCACCACCAACTTTCCTGCCAATG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTTGGGTTCAGGGCTCTaGTCACGCTTGAAAATGGTC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLGSGL*SRLKMV
Trigger: GACCATTTTCAAGCGTGACCAGAGCCCTGAACCCAA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGATGTGGCCATCTATCTaGCTGACAGCCATCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVMWPSI*LTAILV
Trigger: GACCAAGATGGCTGTCAGCCAGATAGATGGCCACAT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCCGAAGTTAGCCTACTaGCATCTCCAGACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLPKLAY*HLQTCH
Trigger: ATGACAAGTCTGGAGATGCCAGTAGGCTAACTTCGG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCTGACCCTGTGCCCTTaGCTGGTAAGCACTCATATA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLTLCP*LVSTHI
Trigger: TATATGAGTGCTTACCAGCCAAGGGCACAGGGTCAG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGGAAACTTCATCTACTaGACTCCCGTTGCCAAGTTG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVGNFIY*TPVAKL
Trigger: CAACTTGGCAACGGGAGTTCAGTAGATGAAGTTTCC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCTCATTCACAAGCTCTaGTGCTATCTTACTGAGGCT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLIHKL*CYLTEA
Trigger: AGCCTCAGTAAGATAGCATCAGAGCTTGTGAATGAG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTTAGCATGGCATCCATaGTATCTGTGGCCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLAWHP*YLWPFG
Trigger: GCCAAAAGGCCACAGATATCATGGATGCCATGCTAA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTCCTTTCATGGAGATaGGGGAATAACTCTCAGCCT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFLSWR*GNNSQP
Trigger: AGGCTGAGAGTTATTCCCTCATCTCCATGAAAGGAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGATATGGAGGAAGGCTaGGGTTGCCAATATCTTCAG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVDMEEG*GCQYLQ
Trigger: CTGAAGATATTGGCAACCTCAGCCTTCCTCCATATC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTGGAGTTGCTTGTTCTaGACTGTGTCCGTTAGGTTG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVWSCLF*TVSVRL
Trigger: CAACCTAACGGACACAGTTCAGAACAAGCAACTCCA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCGAGACCACCTCTTTTaGATGCTTGAGCAGAACCTT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVRDHLF*MLEQNL
Trigger: AAGGTTCTGCTCAAGCATGCAAAAGAGGTGGTCTCG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCCCTCTTTGATAATGTaGTCACCCAGAGTTTTCGCA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLPSLIM*SPRVFA
Trigger: TGCGAAAACTCTGGGTGAGCACATTATCAAAGAGGG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGGGGCTGTCCTGATGTaGCTCTCATTTCATTATGGA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVGAVLM*LSFHYG
Trigger: TCCATAATGAAATGAGAGGCACATCAGGACAGCCCC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGAGTGCCCTTGGTGGTaGTGTTGTAATAGTCTACAG +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVECPWW*CCNSLQ
Trigger: CTGTAGACTATTACAACACCACCACCAAGGGCACTC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTTCTGGAGTGCCCTTaGTGGTGGTGTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFLECP*WWCCNS
Trigger: ACTATTACAACACCACCACCAAGGGCACTCCAGAAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGAAAATGCAATCTTTCTaGAGTGCCCTTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLKMQSF*SALGGG
Trigger: ACCACCACCAAGGGCACTCCAGAAAGATTGCATTTT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGTAGGATGGTGGCAATaGTTGTGTCTTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLVGWWQ*LCLSLG
Trigger: TCCAAGTGAAAGACACAACCATTGCCACCATCCTAC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCCTTCTTCAGTAGGATaGTGGCAATGGTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLPSSVG*WQWLCL
Trigger: AAGACACAACCATTGCCACCATCCTACTGAAGAAGG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATTCTCAGGTTTCTCTaGAGGATATGGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLILRFL*RIWRKA
Trigger: AGCCTTCCTCCATATCCTCCAGAGAAACCTGAGAAT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCCGAAGTTAGCCTACTaGCATCTCCAGACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVPKLAY*HLQTCH
Trigger: ATGACAAGTCTGGAGATGCCAGTAGGCTAACTTCGG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGACAGAGGATAGGTTCTaGGATATGAGGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLTEDRF*DMRKAL
Trigger: AAGAGCTTTCCTCATATCTCAGAACCTATCCTCTGT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCTTTGGTGCTCTCCTTaGTCTTCAAAGTGGACTTGT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLWCSP*SSKWTC
Trigger: ACAAGTCCACTTTGAAGATCAAGGAGAGCACCAAAG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCCTCTTTTGCATGCTTaGGCAGAACCTTCTTCAGTA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVPLLHA*AEPSSV
Trigger: TACTGAAGAAGGTTCTGCTCAAGCATGCAAAAGAGG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGCCTTTTGGCTTCCATaGGAGAAGACAGTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVAFWLP*EKTVLF
Trigger: GAAAAGAACTGTCTTCTCTCATGGAAGCCAAAAGGC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCTCGGCCCAGGAGTCTaGATCATACATAAAATTCTC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLGPGV*IIHKIL
Trigger: GAGAATTTTATGTATGATTCAGACTCCTGGGCCGAG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGACACAGCTTCATCACTaGGTTCATCAGATGTTCTAC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLTQLHH*VHQMFY
Trigger: GTAGAACATCTGATGAACTCAGTGATGAAGCTGTGT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGAACATCTTGGAACTCTaGTGTACTCTTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVNILEL*CTLLQV
Trigger: GACCTGGAGAAGAGTACAGCAGAGTTCCAAGATGTT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTTTACGTCCTTGCTTaGATGGACAGGAAAATCTGC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFYVLA*MDRKIC
Trigger: GCAGATTTTCCTGTCCATGCAAGCAAGGACGTAAAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTGAACCGAACATCTTaGAACTCTGCTGTACTCTTC +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLNRTS*NSAVLF
Trigger: GAAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTTTCTGGAGTGCCCTTaGTGGTGGTGTTGTAATAGT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVFLECP*WWCCNS
Trigger: ACTATTACAACACCACCACCAAGGGCACTCCAGAAA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGAAAATGCAATCTTTCTaGAGTGCCCTTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVKMQSF*SALGGG
Trigger: ACCACCACCAAGGGCACTCCAGAAAGATTGCATTTT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGTAGGATGGTGGCAATaGTTGTGTCTTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVVGWWQ*LCLSLG
Trigger: TCCAAGTGAAAGACACAACCATTGCCACCATCCTAC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTCTTCAGTAGGATGGTaGCAATGGTTGTGTCTTTCA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLSSVGW*QWLCLS
Trigger: TGAAAGACACAACCATTGCCACCATCCTACTGAAGA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCCTTCTTCAGTAGGATaGTGGCAATGGTTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVPSSVG*WQWLCL
Trigger: AAGACACAACCATTGCCACCATCCTACTGAAGAAGG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGATTCTCAGGTTTCTCTaGAGGATATGGAGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVILRFL*RIWRKA
Trigger: AGCCTTCCTCCATATCCTCCAGAGAAACCTGAGAAT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTTTCTGCTTGTTCTTaGTCACCTACAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFSACS*SPTMGA
Trigger: TGCTCCCATTGTAGGTGACCAAGAACAAGCAGAAAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATCTGCAAAATCCAGTaGCTAGCACAAGATGACATG +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLICKIQ*LAQDDM
Trigger: CATGTCATCTTGTGCTAGCCACTGGATTTTGCAGAT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGACAGAGGATAGGTTCTaGGATATGAGGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVTEDRF*DMRKAL
Trigger: AAGAGCTTTCCTCATATCTCAGAACCTATCCTCTGT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGACAAGTCTCCTCCTCTaGTTTGGGTTCAGAATACAT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVTSLLL*FGFRIH
Trigger: ATGTATTCTGAACCCAAATCAGAGGAGGAGACTTGT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGATGCTGGGATGTTCTTaGTCAGCTCAAGATCTTGTT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVMLGCS*SAQDLV
Trigger: AACAAGATCTTGAGCTGAGCAAGAACATCCCAGCAT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGCTTCAAATGCTGCATaGTGGAAACCTAGAGATTTA +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLASNAA*WKPRDL
Trigger: TAAATCTCTAGGTTTCCAGCATGCAGCATTTGAAGC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGATGGACAGGAAAATCTaGAAAATCCAGTGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVMDRKI*KIQWLA
Trigger: TGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTTTTCTGCTTGTTCTTaGTCACCTACAATGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVFSACS*SPTMGA
Trigger: TGCTCCCATTGTAGGTGACCAAGAACAAGCAGAAAA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGACGTCCTTGCTTGCATaGACAGGAAAATCTGCAAAA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVTSLLA*TGKSAK
Trigger: TTTTGCAGATTTTCCTGTCCATGCAAGCAAGGACGT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCAAGGAATCTCTTTGTaGGTCATCTCAAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLQGISL*VISKCN
Trigger: ATTGCATTTTGAGATGACTCACAAAGAGATTCCTTG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR GCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGCTTCAAATGCTGCATaGTGGAAACCTAGAGATTTA +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVASNAA*WKPRDL
Trigger: TAAATCTCTAGGTTTCCAGCATGCAGCATTTGAAGC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CCA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTCAAATGCTGCATGCTaGAAACCTAGAGATTTACAT +
Preference number: 4 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLSNAAC*KPRDLH
Trigger: ATGTAAATCTCTAGGTTTCCAGCATGCAGCATTTGA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCAAGGAATCTCTTTGTaGGTCATCTCAAAATGCAAT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVQGISL*VISKCN
Trigger: ATTGCATTTTGAGATGACTCACAAAGAGATTCCTTG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR TCA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGATTCCCCATGTACAATaGCTGATAGACACATTTGTT +
Preference number: 4 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVIPHVQ*LIDTFV
Trigger: AACAAATGTGTCTATCAGTCATTGTACATGGGGAAT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGGCTGTTCCGGCACCTaGGGTTCAGGGCTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRGCSGT*GSGLWS
Trigger: TGACCAGAGCCCTGAACCCAAGGTGCCGGAACAGCC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 90 bp AGTGGGGTTGCCGATTACAGGTTCACCATCAGCCAGTCCAGCAGCTaGAGCGGTGTGACATTCCCCACCGCCTCATTCAGCTGGCGCTCC +
Preference number: 5 (lower is better)
Translates to: SGVADYRFTISQSSS*SGVTFPTASFSWRS
Trigger: GGAGCGCCAGCTGAATGAGGCGGTGGGGAATGTCACACCGCTGCAGCTGCTGGACTGGCTGATGGTGAACCTGTAATCGGCAACCCCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCTGGCATCTCCAGACTaGTCATCTCCCAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLASPD*SSPSSA
Trigger: GGCAGAGCTGGGAGATGACAAGTCTGGAGATGCCAG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCGAAACCGTCGTTTCTaGGTTAGCGCTTGCGCAGAC +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRRNRRF*VSACAD
Trigger: GTCTGCGCAAGCGCTAACCAAGAAACGACGGTTTCG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGCTGACCCTGTGCCCTaGGCTGGTAAGCACTCATAT +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRADPVP*AGKHSY
Trigger: ATATGAGTGCTTACCAGCCAAGGGCACAGGGTCAGC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGAGAGGCAGCTACCCATaGAAGGACGGCTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRRGSYP*KDGLEL
Trigger: CAACTCCAAGCCGTCCTTCAATGGGTAGCTGCCTCT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGGGAAAGCAGTGGGGTaGCCGATTACAGGTTCACCA +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRGKAVG*PITGSP
Trigger: TGGTGAACCTGTAATCGGCAACCCCACTGCTTTCCC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp CCGATTACAGGTTCACCATCAGCCAGTCCAGCAGCTGCAGCGGTGTaGCATTCCCCACCGCCTCATTCAGCTGGCGCTCCTTCTCATAGC +
Preference number: 5 (lower is better)
Translates to: PITGSPSASPAAAAV*HSPPPHSAGAPSHS
Trigger: GCTATGAGAAGGAGCGCCAGCTGAATGAGGCGGTGGGGAATGTCACACCGCTGCAGCTGCTGGACTGGCTGATGGTGAACCTGTAATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGACTCTCAGCCTTGTCTaGGGCTTTCCTGACATGCTC +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRTLSLV*GFPDML
Trigger: GAGCATGTCAGGAAAGCCCAAGACAAGGCTGAGAGT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGGCTTACGCTGTGTGTaGGGAGCTTCAAATGCTGCA +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRGLRCV*GASNAA
Trigger: TGCAGCATTTGAAGCTCCCAACACACAGCGTAAGCC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCCATGTACCTCCCCCTaGCTGGGAATTTTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRPCTSP*LGIFRE
Trigger: TTCCCTGAAAATTCCCAGCAAGGGGGAGGTACATGG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTCGGGTCTTGCCATTTaGCATGTCCTGAGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRSGLAI*HVLSQS
Trigger: TGACTGACTCAGGACATGCAAAATGGCAAGACCCGA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCCATCGATCTTCTCATaGATCTCTTTGCGGGCCATG +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRPSIFS*ISLRAM
Trigger: CATGGCCCGCAAAGAGATCAATGAGAAGATCGATGG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGGACCCTGTCTTTCTTaGGTGCTCTCCTTGATCTTC +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRGPCLS*VLSLIF
Trigger: GAAGATCAAGGAGAGCACCAAAGAAAGACAGGGTCC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGGGCTCTGGTCACGCTaGAAAATGGTCTCACTAAGT +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRGLWSR*KMVSLS
Trigger: ACTTAGTGAGACCATTTTCAAGCGTGACCAGAGCCC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGCCATTGAAGGACGGCTaGGAGTTGCTTGTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRPLKDG*ELLVLN
Trigger: GTTCAGAACAAGCAACTCCAAGCCGTCCTTCAATGG...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 90 bp GCTCCTTCTCATAGCGCAGCACCGACTGCAGAACCTCGCCCACACTaGATCCTTTGTCCACAGCAGCAGCTGAGAGCTGAAGTAGCTTCT +
Preference number: 5 (lower is better)
Translates to: APSHSAAPTAEPRPH*ILCPQQQLRAEVAS
Trigger: AGAAGCTACTTCAGCTCTCAGCTGCTGCTGTGGACAAAGGATGCAGTGTGGGCGAGGTTCTGCAGTCGGTGCTGCGCTATGAGAAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGATGCTGGGATGTTCTaGCTCAGCTCAAGATCTTGT +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRDAGMF*LSSRSC
Trigger: ACAAGATCTTGAGCTGAGCAAGAACATCCCAGCATC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTCTACAGAGAAACCTTaGTGTGGGTCTCCTGAGTTG +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRSTEKP*CGSPEL
Trigger: CAACTCAGGAGACCCACACAAAGGTTTCTCTGTAGA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTCTCATTGATCTCTTaGCGGGCCATGGCTATGACT +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFSLIS*RAMAMT
Trigger: AGTCATAGCCATGGCCCGCAAAGAGATCAATGAGAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGAAGGTAAGCCCCTCTTaGATAATGTGCTCACCCAGA +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRKVSPS*IMCSPR
Trigger: TCTGGGTGAGCACATTATCAAAGAGGGGCTTACCTT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTACAAAATAGGGACATaGAGCTCAGAGGCAGCTACC +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRYKIGT*SSEAAT
Trigger: GGTAGCTGCCTCTGAGCTCAATGTCCCTATTTTGTA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 90 bp CCAGGAAACGCGAACAGCAGGCGCAAGGGTCCCTATGAGAGAATGTaGTTGGCGGGCTCGACGCACATTTATTTACTTGGGACACACCCT +
Preference number: 5 (lower is better)
Translates to: PGNANSRRKGPYERM*LAGSTHIYLLGTHP
Trigger: AGGGTGTGTCCCAAGTAAATAAATGTGCGTCGAGCCCGCCAAGCACATTCTCTCATAGGGACCCTTGCGCCTGCTGTTCGCGTTTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544636.1
CDS CCA 90 bp GATGCTGGGATGTTCTTGCTCAGCTCAAGATCTTGTTTCTTCCTGTaGCCTTCCATGTACCTCCCCCTTGCTGGGACAGGGCTGCCAGCT +
Preference number: 5 (lower is better)
Translates to: DAGMFLLSSRSCFFL*PSMYLPLAGTGLPA
Trigger: AGCTGGCAGCCCTGTCCCAGCAAGGGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGATCTTGAGCTGAGCAAGAACATCCCAGCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000541484.1
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGACCTCTTTTGCATGCTaGAGCAGAACCTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRTSFAC*SRTFFS
Trigger: ACTGAAGAAGGTTCTGCTCAAGCATGCAAAAGAGGT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp TCAGATGTTCTACCATCTGCCCACTCATGTGGCCATCTATCTGGCTaGCAGCCATCTTGGTCAGCCCAGAAAGGGCACCAGGGGTCTCAT +
Preference number: 5 (lower is better)
Translates to: SDVLPSAHSCGHLSG*QPSWSAQKGHQGSH
Trigger: ATGAGACCCCTGGTGCCCTTTCTGGGCTGACCAAGATGGCTGTCAGCCAGATAGATGGCCACATGAGTGGGCAGATGGTAGAACATCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp CTTGGAGTTGCTTGTTCTGAACTGTGTCCGTTAGGTTGTGATTGCTaGCAATCACCGTGGGTGCTGCACACCCTTCAGGGGGCTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LGVACSELCPLGCDC*QSPWVLHTLQGAVL
Trigger: CAGGACAGCCCCCTGAAGGGTGTGCAGCACCCACGGTGATTGTCAGCAATCACAACCTAACGGACACAGTTCAGAACAAGCAACTCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp GCCGAGACAAACTGTGTGTCAGTCATGAGGGTCCCTGTGACGCTGTaGAGATTCCTCAAGAAGGAGTCGATGAGATCCGAGACCACCTCT +
Preference number: 5 (lower is better)
Translates to: AETNCVSVMRVPVTL*RFLKKESMRSETTS
Trigger: AGAGGTGGTCTCGGATCTCATCGACTCCTTCTTGAGGAATCTCCACAGCGTCACAGGGACCCTCATGACTGACACACAGTTTGTCTCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp GGCAAGATTCATCGGGAGCTACAGGAGGTTCATTGGCAGGAAAGTTaGTGGTGCCAGCAGCTTCAACGAAGCTCCGTGCATCCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: GKIHRELQEVHWQES*WCQQLQRSSVHPFF
Trigger: GAAGAAGGGATGCACGGAGCTTCGTTGAAGCTGCTGGCACCACCAACTTTCCTGCCAATGAACCTCCTGTAGCTCCCGATGAATCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp TTCATCAGATGTTCTACCATCTGCCCACTCATGTGGCCATCTATCTaGCTGACAGCCATCTTGGTCAGCCCAGAAAGGGCACCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: FIRCSTICPLMWPSI*LTAILVSPERAPGV
Trigger: GACCCCTGGTGCCCTTTCTGGGCTGACCAAGATGGCTGTCAGCCAGATAGATGGCCACATGAGTGGGCAGATGGTAGAACATCTGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTTGAACCGAACATCTaGGAACTCTGCTGTACTCTT +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFEPNI*ELCCTL
Trigger: AAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGGTTGTGTCTTTCACTaGGATCTTCAGTGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRGCVFH*DLQCLH
Trigger: ATGAAGACACTGAAGATCCAAGTGAAAGACACAACC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTCATTATGGATAGCTaGATAGGCATTCTGCAGGAC +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFIMDS*IGILQD
Trigger: GTCCTGCAGAATGCCTATCAAGCTATCCATAATGAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 90 bp ATTGGCAGGAAAGTTGGTGGTGCCAGCAGCTTCAACGAAGCTCCGTaGATCCCTTCTTCCTCCCTGGGCCAGGTGATATTGAATCAGAAG +
Preference number: 5 (lower is better)
Translates to: IGRKVGGASSFNEAP*IPSSSLGQVILNQK
Trigger: CTTCTGATTCAATATCACCTGGCCCAGGGAGGAAGAAGGGATGCACGGAGCTTCGTTGAAGCTGCTGGCACCACCAACTTTCCTGCCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp GACGTTTCCCCACCAAATGATTCTCCGGGTTTGAACCGAACATCTTaGAACTCTGCTGTACTCTTCTCCAGGTCTCTGCGGAGCCAGCTG +
Preference number: 5 (lower is better)
Translates to: DVSPPNDSPGLNRTS*NSAVLFSRSLRSQL
Trigger: CAGCTGGCTCCGCAGAGACCTGGAGAAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAACCCGGAGAATCATTTGGTGGGGAAACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000536414.3
ENST00000540967.5
ENST00000545990.6
CDS CCA 90 bp AGACTCTGTCTCCAGAGCCAGGAGCCTTGTCTGGGGCAGCATTCCTaGAACATGCAGAGACGGTCTCATTCACAAGCTCTGATGCTATCT +
Preference number: 5 (lower is better)
Translates to: RLCLQSQEPCLGQHS*NMQRRSHSQALMLS
Trigger: AGATAGCATCAGAGCTTGTGAATGAGACCGTCTCTGCATGTTCCAGGAATGCTGCCCCAGACAAGGCTCCTGGCTCTGGAGACAGAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp AAGATTCATCGGGAGCTACAGGAGGTTCATTGGCAGGAAAGTTGGTaGTGCCAGCAGCTTCAACGAAGCTCCGTGCATCCCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KIHRELQEVHWQESW*CQQLQRSSVHPFFL
Trigger: GAGGAAGAAGGGATGCACGGAGCTTCGTTGAAGCTGCTGGCACCACCAACTTTCCTGCCAATGAACCTCCTGTAGCTCCCGATGAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTGGCAAACATTACATaGTACAGCTTCCTTAGCATG +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRLANIT*YSFLSM
Trigger: CATGCTAAGGAAGCTGTACAATGTAATGTTTGCCAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGGTCTCCTCCTCTGATTaGGGTTCAGAATACATTTTT +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRVSSSD*GSEYIF
Trigger: AAAAATGTATTCTGAACCCAAATCAGAGGAGGAGAC...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp GCTGACAATCACCGTGGGTGCTGCACACCCTTCAGGGGGCTGTCCTaGTGTGCCTCTCATTTCATTATGGATAGCTTGATAGGCATTCTG +
Preference number: 5 (lower is better)
Translates to: ADNHRGCCTPFRGLS*CASHFIMDSLIGIL
Trigger: CAGAATGCCTATCAAGCTATCCATAATGAAATGAGAGGCACATCAGGACAGCCCCCTGAAGGGTGTGCAGCACCCACGGTGATTGTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp GAAACGCGAACAGCAGGCGCAAGGGTCCCTATGAGAGAATGTGCTTaGCGGGCTCGACGCACATTTATTTACTTGGGACACACCCTATTT +
Preference number: 5 (lower is better)
Translates to: ETRTAGARVPMRECA*RARRTFIYLGHTLF
Trigger: AAATAGGGTGTGTCCCAAGTAAATAAATGTGCGTCGAGCCCGCCAAGCACATTCTCTCATAGGGACCCTTGCGCCTGCTGTTCGCGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544636.1
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGACTTGTATTTCAAATTaGGGGGACTTTGTGATGATC +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRTCISN*GDFVMI
Trigger: GATCATCACAAAGTCCCCCAAATTTGAAATACAAGT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGATCTTCAAAGTGGACTaGTATTTCAAATTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRIFKVD*YFKFGG
Trigger: TCCCCCAAATTTGAAATACAAGTCCACTTTGAAGAT...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp GTGGAAGTGAGAAAGAAGGGCGGGGATAAGGGCCGGCCCCACTGCCAGAAGAGGTTTAATTTTACGTCCTaGCTTGCATGGACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: VEVRKKGGDKGRPHCQKRFNFTS*LAWTGK
Trigger: TTTTCCTGTCCATGCAAGCAAGGACGTAAAATTAAA...CCTCTTCTGGCAGTGGGGCCGGCCCTTATCCCCGCCCTTCTTTCTCACTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp GGTCTCCTGAGTTGGACGTTTCCCCACCAAATGATTCTCCGGGTTTaGACCGAACATCTTGGAACTCTGCTGTACTCTTCTCCAGGTCTC +
Preference number: 5 (lower is better)
Translates to: GLLSWTFPHQMILRV*TEHLGTLLYSSPGL
Trigger: GAGACCTGGAGAAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAACCCGGAGAATCATTTGGTGGGGAAACGTCCAACTCAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000536414.3
ENST00000540967.5
ENST00000545990.6
CDS GCA 90 bp ATGATCCCTTCACTAACAGAAGCCGTAAAGTCATCAGGCCTTTCCTaGCCTCGAAACCTCTTTCTCTCCCGAGGAAAGAACCTTCCACCC +
Preference number: 5 (lower is better)
Translates to: MIPSLTEAVKSSGLS*PRNLFLSRGKNLPP
Trigger: GGGTGGAAGGTTCTTTCCTCGGGAGAGAAAGAGGTTTCGAGGGCAGGAAAGGCCTGATGACTTTACGGCTTCTGTTAGTGAAGGGATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp TTCATCACTGAGTTCATCAGATGTTCTACCATCTGCCCACTCATGTaGCCATCTATCTGGCTGACAGCCATCTTGGTCAGCCCAGAAAGG +
Preference number: 5 (lower is better)
Translates to: FITEFIRCSTICPLM*PSIWLTAILVSPER
Trigger: CCTTTCTGGGCTGACCAAGATGGCTGTCAGCCAGATAGATGGCCACATGAGTGGGCAGATGGTAGAACATCTGATGAACTCAGTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp CTTGATAGGCATTCTGCAGGACAGCTTCTGCTGACCCTGTGCCCTTaGCTGGTAAGCACTCATATAAACTATCTGGGAAGGCCGAAGTTA +
Preference number: 5 (lower is better)
Translates to: LDRHSAGQLLLTLCP*LVSTHINYLGRPKL
Trigger: TAACTTCGGCCTTCCCAGATAGTTTATATGAGTGCTTACCAGCCAAGGGCACAGGGTCAGCAGAAGCTGTCCTGCAGAATGCCTATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp GATGCTGGGATGTTCTTGCTCAGCTCAAGATCTTGTTTCTTCCTGTaGCCTTCCATGTACCTCCCCCTTGCTGGGAATTTTCAGGGAACA +
Preference number: 5 (lower is better)
Translates to: DAGMFLLSSRSCFFL*PSMYLPLAGNFQGT
Trigger: TGTTCCCTGAAAATTCCCAGCAAGGGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGATCTTGAGCTGAGCAAGAACATCCCAGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTCTACTGAACTCCCGTaGCCAAGTTGGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLSTELP*PSWALG
Trigger: CCCCAGGGCCCAACTTGGCAACGGGAGTTCAGTAGA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 90 bp TTCCTCAAGAAGGAGTCGATGAGATCCGAGACCACCTCTTTTGCATaGTTGAGCAGAACCTTCTTCAGTAGGATGGTGGCAATGGTTGTG +
Preference number: 5 (lower is better)
Translates to: FLKKESMRSETTSFA*LSRTFFSRMVAMVV
Trigger: CACAACCATTGCCACCATCCTACTGAAGAAGGTTCTGCTCAAGCATGCAAAAGAGGTGGTCTCGGATCTCATCGACTCCTTCTTGAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 90 bp ATGACACACAGCTTCATCACTGAGTTCATCAGATGTTCTACCATCTaGCCACTCATGTGGCCATCTATCTGGCTGACAGCCATCTTGGTC +
Preference number: 5 (lower is better)
Translates to: MTHSFITEFIRCSTI*PLMWPSIWLTAILV
Trigger: GACCAAGATGGCTGTCAGCCAGATAGATGGCCACATGAGTGGGCAGATGGTAGAACATCTGATGAACTCAGTGATGAAGCTGTGTGTCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp CTATCTTCCTTAACTGGCTGTTCCGGCACCTTGGGTTCAGGGCTCTaGTCACGCTTGAAAATGGTCTCACTAAGTAAGTTCCGGATGAAA +
Preference number: 5 (lower is better)
Translates to: LSSLTGCSGTLGSGL*SRLKMVSLSKFRMK
Trigger: TTTCATCCGGAACTTACTTAGTGAGACCATTTTCAAGCGTGACCAGAGCCCTGAACCCAAGGTGCCGGAACAGCCAGTTAAGGAAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp GTAAGCACTCATATAAACTATCTGGGAAGGCCGAAGTTAGCCTACTaGCATCTCCAGACTTGTCATCTCCCAGCTCTGCCAACGAAGCAT +
Preference number: 5 (lower is better)
Translates to: VSTHINYLGRPKLAY*HLQTCHLPALPTKH
Trigger: ATGCTTCGTTGGCAGAGCTGGGAGATGACAAGTCTGGAGATGCCAGTAGGCTAACTTCGGCCTTCCCAGATAGTTTATATGAGTGCTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp AAGATCTTGTTTCTTCCTGTGGCCTTCCATGTACCTCCCCCTTGCTaGGAATTTTCAGGGAACAGGAAACTGAGAGTCAGGAAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: KILFLPVAFHVPPPC*EFSGNRKLRVRKGE
Trigger: CTCACCTTTCCTGACTCTCAGTTTCCTGTTCCCTGAAAATTCCCAGCAAGGGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTCTACTGAACTCCCGTaGCCAAGTTGGGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVSTELP*PSWALG
Trigger: CCCCAGGGCCCAACTTGGCAACGGGAGTTCAGTAGA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTGGCTGACAGCCATCTaGGTCAGCCCAGAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLWLTAI*VSPERA
Trigger: TGCCCTTTCTGGGCTGACCAAGATGGCTGTCAGCCA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp CGAAGCATCACAGGACTTAGCAATGATGACACACAGCTTCATCACTaGGTTCATCAGATGTTCTACCATCTGCCCACTCATGTGGCCATC +
Preference number: 5 (lower is better)
Translates to: RSITGLSNDDTQLHH*VHQMFYHLPTHVAI
Trigger: GATGGCCACATGAGTGGGCAGATGGTAGAACATCTGATGAACTCAGTGATGAAGCTGTGTGTCATCATTGCTAAGTCCTGTGATGCTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGCGAAACCGTCGTTTCTaGGTTAGCGCTTGCGCAGAC +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLRNRRF*VSACAD
Trigger: GTCTGCGCAAGCGCTAACCAAGAAACGACGGTTTCG...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTGGCTGACAGCCATCTaGGTCAGCCCAGAAAGGGCA +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVWLTAI*VSPERA
Trigger: TGCCCTTTCTGGGCTGACCAAGATGGCTGTCAGCCA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGGGAAAGCAGTGGGGTaGCCGATTACAGGTTCACCA +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLGKAVG*PITGSP
Trigger: TGGTGAACCTGTAATCGGCAACCCCACTGCTTTCCC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp AACATGCAGAGACGGTCTCATTCACAAGCTCTGATGCTATCTTACTaGGGCTTTTGGTGGGTGTGGGTTCATTCCCCATGTACAATGACT +
Preference number: 5 (lower is better)
Translates to: NMQRRSHSQALMLSY*GFWWVWVHSPCTMT
Trigger: AGTCATTGTACATGGGGAATGAACCCACACCCACCAAAAGCCTCAGTAAGATAGCATCAGAGCTTGTGAATGAGACCGTCTCTGCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTGTGGGTCTCCTGAGTaGGACGTTTCCCCACCAAAT +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLCGSPE*DVSPPN
Trigger: ATTTGGTGGGGAAACGTCCAACTCAGGAGACCCACA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGGCTTACGCTGTGTGTaGGGAGCTTCAAATGCTGCA +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLGLRCV*GASNAA
Trigger: TGCAGCATTTGAAGCTCCCAACACACAGCGTAAGCC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTCATTGGCAGGAAAGTaGGTGGTGCCAGCAGCTTCA +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLSLAGK*VVPAAS
Trigger: TGAAGCTGCTGGCACCACCAACTTTCCTGCCAATGA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGCTGACCCTGTGCCCTaGGCTGGTAAGCACTCATAT +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVADPVP*AGKHSY
Trigger: ATATGAGTGCTTACCAGCCAAGGGCACAGGGTCAGC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp TTCCTTAGCATGGCATCCATGATATCTGTGGCCTTTTGGCTTCCATaGGAGAAGACAGTTCTTTTCACAGCCGAGACAAACTGTGTGTCA +
Preference number: 5 (lower is better)
Translates to: FLSMASMISVAFWLP*EKTVLFTAETNCVS
Trigger: TGACACACAGTTTGTCTCGGCTGTGAAAAGAACTGTCTTCTCTCATGGAAGCCAAAAGGCCACAGATATCATGGATGCCATGCTAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp TGTGAGTCATCTCAAAATGCAATCTTTCTGGAGTGCCCTTGGTGGTaGTGTTGTAATAGTCTACAGAGAAACCTTTGTGTGGGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: CESSQNAIFLECPWW*CCNSLQRNLCVGLL
Trigger: CAGGAGACCCACACAAAGGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGATGACTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 90 bp CAGGGTACTCAAAGGAAATGTCTGATGCAGGCTTACGCTGTGTGTTaGGAGCTTCAAATGCTGCATGCTGGAAACCTAGAGATTTACATT +
Preference number: 5 (lower is better)
Translates to: QGTQRKCLMQAYAVC*ELQMLHAGNLEIYI
Trigger: AATGTAAATCTCTAGGTTTCCAGCATGCAGCATTTGAAGCTCCCAACACACAGCGTAAGCCTGCATCAGACATTTCCTTTGAGTACCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTTCCAGTCCTGGGCTaGGTTGTCTCCAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFPVLG*VVSRRI
Trigger: TATTCTCCTGGAGACAACCAAGCCCAGGACTGGAAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTGTGGGTCTCCTGAGTaGGACGTTTCCCCACCAAAT +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVCGSPE*DVSPPN
Trigger: ATTTGGTGGGGAAACGTCCAACTCAGGAGACCCACA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGACTCTCAGCCTTGTCTaGGGCTTTCCTGACATGCTC +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVTLSLV*GFPDML
Trigger: GAGCATGTCAGGAAAGCCCAAGACAAGGCTGAGAGT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCTGGGCCAGGTGATATaGAATCAGAAGCAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVLGQVI*NQKQGR
Trigger: TCTGCCCTGCTTCTGATTCAATATCACCTGGCCCAG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGGGCTCTGGTCACGCTaGAAAATGGTCTCACTAAGT +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLGLWSR*KMVSLS
Trigger: ACTTAGTGAGACCATTTTCAAGCGTGACCAGAGCCC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGAAGGACGGCTTGGAGTaGCTTGTTCTGAACTGTGTC +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLKDGLE*LVLNCV
Trigger: GACACAGTTCAGAACAAGCAACTCCAAGCCGTCCTT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 90 bp TCCAGTCCTGGGCTTGGTTGTCTCCAGGAGAATAGACATCAACTTTaGATACTCCATTTTGGCTTTGTAACCAGTCAACCTTTTCTGACA +
Preference number: 5 (lower is better)
Translates to: SSPGLGCLQENRHQL*ILHFGFVTSQPFLT
Trigger: TGTCAGAAAAGGTTGACTGGTTACAAAGCCAAAATGGAGTATGCAAAGTTGATGTCTATTCTCCTGGAGACAACCAAGCCCAGGACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000536414.3
ENST00000540967.5
ENST00000545990.6
CDS CCA 90 bp CTTTGTGAGTCATCTCAAAATGCAATCTTTCTGGAGTGCCCTTGGTaGTGGTGTTGTAATAGTCTACAGAGAAACCTTTGTGTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LCESSQNAIFLECPW*WCCNSLQRNLCVGL
Trigger: GAGACCCACACAAAGGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGATGACTCACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 90 bp CTGGCAAGGAATCTCTTTGTGAGTCATCTCAAAATGCAATCTTTCTaGAGTGCCCTTGGTGGTGGTGTTGTAATAGTCTACAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: LARNLFVSHLKMQSF*SALGGGVVIVYRET
Trigger: GGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGATGACTCACAAAGAGATTCCTTGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 90 bp CTCGAAACCTCTTTCTCTCCCGAGGAAAGAACCTTCCACCCTCTCTaGCATAATCTCCATTACGAGATTCAAACACTTCCTTATAGAAGA +
Preference number: 5 (lower is better)
Translates to: LETSFSPEERTFHPL*HNLHYEIQTLPYRR
Trigger: TCTTCTATAAGGAAGTGTTTGAATCTCGTAATGGAGATTATGCCAGAGAGGGTGGAAGGTTCTTTCCTCGGGAGAGAAAGAGGTTTCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGTTTCCAGTCCTGGGCTaGGTTGTCTCCAGGAGAATA +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVFPVLG*VVSRRI
Trigger: TATTCTCCTGGAGACAACCAAGCCCAGGACTGGAAA...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTCTCATTGATCTCTTaGCGGGCCATGGCTATGACT +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFSLIS*RAMAMT
Trigger: AGTCATAGCCATGGCCCGCAAAGAGATCAATGAGAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGCCATTGAAGGACGGCTaGGAGTTGCTTGTTCTGAAC +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVPLKDG*ELLVLN
Trigger: GTTCAGAACAAGCAACTCCAAGCCGTCCTTCAATGG...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTACAAAATAGGGACATaGAGCTCAGAGGCAGCTACC +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLYKIGT*SSEAAT
Trigger: GGTAGCTGCCTCTGAGCTCAATGTCCCTATTTTGTA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 90 bp TCTCTTTGTGAGTCATCTCAAAATGCAATCTTTCTGGAGTGCCCTTaGTGGTGGTGTTGTAATAGTCTACAGAGAAACCTTTGTGTGGGT +
Preference number: 5 (lower is better)
Translates to: SLCESSQNAIFLECP*WWCCNSLQRNLCVG
Trigger: ACCCACACAAAGGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGATGACTCACAAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 90 bp CACTTCCTTATAGAAGAAAGACTTCTTAGAAGGAGGCTTGTCATCTaGACCCTGTCTTTCTTTGGTGCTCTCCTTGATCTTCAAAGTGGA +
Preference number: 5 (lower is better)
Translates to: HFLIEERLLRRRLVI*TLSFFGALLDLQSG
Trigger: TCCACTTTGAAGATCAAGGAGAGCACCAAAGAAAGACAGGGTCCAGATGACAAGCCTCCTTCTAAGAAGTCTTTCTTCTATAAGGAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGATGCTGGGATGTTCTaGCTCAGCTCAAGATCTTGT +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVDAGMF*LSSRSC
Trigger: ACAAGATCTTGAGCTGAGCAAGAACATCCCAGCATC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGAATGATTCTCCGGGTTaGAACCGAACATCTTGGAAC +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLNDSPG*NRTSWN
Trigger: GTTCCAAGATGTTCGGTTCAAACCCGGAGAATCATT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGGATGGTGGCAATGGTaGTGTCTTTCACTTGGATCT +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVGWWQW*CLSLGS
Trigger: AGATCCAAGTGAAAGACACAACCATTGCCACCATCC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp TCTTGGCAAACATTACATTGTACAGCTTCCTTAGCATGGCATCCATaGTATCTGTGGCCTTTTGGCTTCCATGAGAGAAGACAGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SWQTLHCTASLAWHP*YLWPFGFHERRQFF
Trigger: AAAGAACTGTCTTCTCTCATGGAAGCCAAAAGGCCACAGATATCATGGATGCCATGCTAAGGAAGCTGTACAATGTAATGTTTGCCAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTTGAACCGAACATCTaGGAACTCTGCTGTACTCTT +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFEPNI*ELCCTL
Trigger: AAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGACCTCTTTTGCATGCTaGAGCAGAACCTTCTTCAGT +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVTSFAC*SRTFFS
Trigger: ACTGAAGAAGGTTCTGCTCAAGCATGCAAAAGAGGT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTGCTCAGGGACTTTCTaGGCAAACATTACATTGTAC +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLCSGTF*ANITLY
Trigger: GTACAATGTAATGTTTGCCAAGAAAGTCCCTGAGCA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATTTTACGTCCTTGCTaGCATGGACAGGAAAATCTG +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLILRPC*HGQENL
Trigger: CAGATTTTCCTGTCCATGCAAGCAAGGACGTAAAAT...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 90 bp AAGGAATCTCTTTGTGAGTCATCTCAAAATGCAATCTTTCTGGAGTaGCCTTGGTGGTGGTGTTGTAATAGTCTACAGAGAAACCTTTGT +
Preference number: 5 (lower is better)
Translates to: KESLCESSQNAIFLE*PWWWCCNSLQRNLC
Trigger: ACAAAGGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGATGACTCACAAAGAGATTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 90 bp AAATTAAAGAAAACACTCCTTAGGTCCTTCTTTTCTGCTTGTTCTTaGTCACCTACAATGGGAGCAGACTTAAGGCAAGATTCATCGGGA +
Preference number: 5 (lower is better)
Translates to: KLKKTLLRSFFSACS*SPTMGADLRQDSSG
Trigger: TCCCGATGAATCTTGCCTTAAGTCTGCTCCCATTGTAGGTGACCAAGAACAAGCAGAAAAGAAGGACCTAAGGAGTGTTTTCTTTAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGGGTTGTGTCTTTCACTaGGATCTTCAGTGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVGCVFH*DLQCLH
Trigger: ATGAAGACACTGAAGATCCAAGTGAAAGACACAACC...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTGGCAAACATTACATaGTACAGCTTCCTTAGCATG +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLLANIT*YSFLSM
Trigger: CATGCTAAGGAAGCTGTACAATGTAATGTTTGCCAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGGTCTCCTCCTCTGATTaGGGTTCAGAATACATTTTT +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLVSSSD*GSEYIF
Trigger: AAAAATGTATTCTGAACCCAAATCAGAGGAGGAGAC...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp ATGGACAGGAAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGTTTAATTTTACGTCCTaGCTTGCATGGACAGGAAAA +
Preference number: 5 (lower is better)
Translates to: MDRKICKIQWLAQDDMSLFNFTS*LAWTGK
Trigger: TTTTCCTGTCCATGCAAGCAAGGACGTAAAATTAAA...CAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTTCCTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGACTTGTATTTCAAATTaGGGGGACTTTGTGATGATC +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVTCISN*GDFVMI
Trigger: GATCATCACAAAGTCCCCCAAATTTGAAATACAAGT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS-3UTR CAA 90 bp AAAATCTGCAAAATCCAGTGGCTAGCACAAGATGACATGTCTTTGATGAGAGTGATCTTCAAAGTGGACTaGTATTTCAAATTTGGGGGA +
Preference number: 5 (lower is better)
Translates to: KICKIQWLAQDDMSLMRVIFKVD*YFKFGG
Trigger: TCCCCCAAATTTGAAATACAAGTCCACTTTGAAGAT...CACTCTCATCAAAGACATGTCATCTTGTGCTAGCCACTGGATTTTGCAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 90 bp AGTCAACCTTTTCTGACATTCTTACAGAGGATAGGTTCTGAGATATaGGGAAAGCTCTTGATTAATTTATTGTTGTCTTCACTATCCCTC +
Preference number: 5 (lower is better)
Translates to: SQPFLTFLQRIGSEI*GKLLINLLLSSLSL
Trigger: GAGGGATAGTGAAGACAACAATAAATTAATCAAGAGCTTTCCTCATATCTCAGAACCTATCCTCTGTAAGAATGTCAGAAAAGGTTGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000536414.3
ENST00000545990.6
CDS TCA 72 bp GGTTCACCATCAGCCAGTCCAGCAGCTGCAGCGGTGTaGCATTCCCCACCGCCTCATTCAGCTGGCGCTCCT +
Preference number: 6 (lower is better)
Translates to: GSPSASPAAAAV*HSPPPHSAGAP
Trigger: AGGAGCGCCAGCTGAATGAGGCGGTGGGGAATGTCACACCGCTGCAGCTGCTGGACTGGCTGATGGTGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 72 bp GCCGATTACAGGTTCACCATCAGCCAGTCCAGCAGCTaGAGCGGTGTGACATTCCCCACCGCCTCATTCAGC +
Preference number: 6 (lower is better)
Translates to: ADYRFTISQSSS*SGVTFPTASFS
Trigger: GCTGAATGAGGCGGTGGGGAATGTCACACCGCTGCAGCTGCTGGACTGGCTGATGGTGAACCTGTAATCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 72 bp TCCCGAGACTCTGTCTCCAGAGCCAGGAGCCTTGTCTaGGGCAGCATTCCTGGAACATGCAGAGACGGTCTC +
Preference number: 6 (lower is better)
Translates to: SRDSVSRARSLV*GSIPGTCRDGL
Trigger: GAGACCGTCTCTGCATGTTCCAGGAATGCTGCCCCAGACAAGGCTCCTGGCTCTGGAGACAGAGTCTCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp AACGAAGCTCCGTGCATCCCTTCTTCCTCCCTGGGCCAGGTGATATaGAATCAGAAGCAGGGCAGACACGATCAGGTCCTCGGCCCAGGA +
Preference number: 6 (lower is better)
Translates to: NEAPCIPSSSLGQVI*NQKQGRHDQVLGPG
Trigger: TCCTGGGCCGAGGACCTGATCGTGTCTGCCCTGCTTCTGATTCAATATCACCTGGCCCAGGGAGGAAGAAGGGATGCACGGAGCTTCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 72 bp CATAGCGCAGCACCGACTGCAGAACCTCGCCCACACTaGATCCTTTGTCCACAGCAGCAGCTGAGAGCTGAA +
Preference number: 6 (lower is better)
Translates to: HSAAPTAEPRPH*ILCPQQQLRAE
Trigger: TTCAGCTCTCAGCTGCTGCTGTGGACAAAGGATGCAGTGTGGGCGAGGTTCTGCAGTCGGTGCTGCGCTATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 72 bp CGTGAGGCGGTTAGCATAGAAGGAAACTTCATCTACTaGACTCCCGTTGCCAAGTTGGGCCCTGGGGCCCTG +
Preference number: 6 (lower is better)
Translates to: REAVSIEGNFIY*TPVAKLGPGAL
Trigger: CAGGGCCCCAGGGCCCAACTTGGCAACGGGAGTTCAGTAGATGAAGTTTCCTTCTATGCTAACCGCCTCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 72 bp CTCCAGAGCCAGGAGCCTTGTCTGGGGCAGCATTCCTaGAACATGCAGAGACGGTCTCATTCACAAGCTCTG +
Preference number: 6 (lower is better)
Translates to: LQSQEPCLGQHS*NMQRRSHSQAL
Trigger: CAGAGCTTGTGAATGAGACCGTCTCTGCATGTTCCAGGAATGCTGCCCCAGACAAGGCTCCTGGCTCTGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp CCGTGCATCCCTTCTTCCTCCCTGGGCCAGGTGATATaGAATCAGAAGCAGGGCAGACACGATCAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: PCIPSSSLGQVI*NQKQGRHDQVL
Trigger: GAGGACCTGATCGTGTCTGCCCTGCTTCTGATTCAATATCACCTGGCCCAGGGAGGAAGAAGGGATGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp GGACTTTGTGATGATCCCGAGACTCTGTCTCCAGAGCCAGGAGCCTaGTCTGGGGCAGCATTCCTGGAACATGCAGAGACGGTCTCATTC +
Preference number: 6 (lower is better)
Translates to: GLCDDPETLSPEPGA*SGAAFLEHAETVSF
Trigger: GAATGAGACCGTCTCTGCATGTTCCAGGAATGCTGCCCCAGACAAGGCTCCTGGCTCTGGAGACAGAGTCTCGGGATCATCACAAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 72 bp GCGAACAGCAGGCGCAAGGGTCCCTATGAGAGAATGTaGTTGGCGGGCTCGACGCACATTTATTTACTTGGG +
Preference number: 6 (lower is better)
Translates to: ANSRRKGPYERM*LAGSTHIYLLG
Trigger: CCCAAGTAAATAAATGTGCGTCGAGCCCGCCAAGCACATTCTCTCATAGGGACCCTTGCGCCTGCTGTTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544636.1
CDS CAA 72 bp GGGAAGGCCGAAGTTAGCCTACTGGCATCTCCAGACTaGTCATCTCCCAGCTCTGCCAACGAAGCATCACAG +
Preference number: 6 (lower is better)
Translates to: GKAEVSLLASPD*SSPSSANEASQ
Trigger: CTGTGATGCTTCGTTGGCAGAGCTGGGAGATGACAAGTCTGGAGATGCCAGTAGGCTAACTTCGGCCTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp ACCATCTGCCCACTCATGTGGCCATCTATCTGGCTGACAGCCATCTaGGTCAGCCCAGAAAGGGCACCAGGGGTCTCATCATCCTCATAT +
Preference number: 6 (lower is better)
Translates to: TICPLMWPSIWLTAI*VSPERAPGVSSSSY
Trigger: ATATGAGGATGATGAGACCCCTGGTGCCCTTTCTGGGCTGACCAAGATGGCTGTCAGCCAGATAGATGGCCACATGAGTGGGCAGATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 72 bp AAAGGGCACCAGGGGTCTCATCATCCTCATATAGCCTaGGGGGAGAAGACGCCAACGGTCTTTCACACAACT +
Preference number: 6 (lower is better)
Translates to: KGHQGSHHPHIA*GEKTPTVFHTT
Trigger: AGTTGTGTGAAAGACCGTTGGCGTCTTCTCCCCCCAGGCTATATGAGGATGATGAGACCCCTGGTGCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 72 bp ACAGCAGGCGCAAGGGTCCCTATGAGAGAATGTGCTTaGCGGGCTCGACGCACATTTATTTACTTGGGACAC +
Preference number: 6 (lower is better)
Translates to: TAGARVPMRECA*RARRTFIYLGH
Trigger: GTGTCCCAAGTAAATAAATGTGCGTCGAGCCCGCCAAGCACATTCTCTCATAGGGACCCTTGCGCCTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544636.1
CDS CAA 90 bp GGAGCAGACTTAAGGCAAGATTCATCGGGAGCTACAGGAGGTTCATaGGCAGGAAAGTTGGTGGTGCCAGCAGCTTCAACGAAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: GADLRQDSSGATGGS*AGKLVVPAASTKLR
Trigger: ACGGAGCTTCGTTGAAGCTGCTGGCACCACCAACTTTCCTGCCAATGAACCTCCTGTAGCTCCCGATGAATCTTGCCTTAAGTCTGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp GGAAACGCGAACAGCAGGCGCAAGGGTCCCTATGAGAGAATGTGCTaGGCGGGCTCGACGCACATTTATTTACTTGGGACACACCCTATT +
Preference number: 6 (lower is better)
Translates to: GNANSRRKGPYERMC*AGSTHIYLLGTHPI
Trigger: AATAGGGTGTGTCCCAAGTAAATAAATGTGCGTCGAGCCCGCCAAGCACATTCTCTCATAGGGACCCTTGCGCCTGCTGTTCGCGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544636.1
CDS TCA 72 bp CACCGTGGGTGCTGCACACCCTTCAGGGGGCTGTCCTaGTGTGCCTCTCATTTCATTATGGATAGCTTGATA +
Preference number: 6 (lower is better)
Translates to: HRGCCTPFRGLS*CASHFIMDSLI
Trigger: TATCAAGCTATCCATAATGAAATGAGAGGCACATCAGGACAGCCCCCTGAAGGGTGTGCAGCACCCACGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 72 bp ATGTTCTTGCTCAGCTCAAGATCTTGTTTCTTCCTGTaGCCTTCCATGTACCTCCCCCTTGCTGGGACAGGG +
Preference number: 6 (lower is better)
Translates to: MFLLSSRSCFFL*PSMYLPLAGTG
Trigger: CCCTGTCCCAGCAAGGGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGATCTTGAGCTGAGCAAGAACAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000541484.1
CDS CCA 72 bp AACTGTGTGTCAGTCATGAGGGTCCCTGTGACGCTGTaGAGATTCCTCAAGAAGGAGTCGATGAGATCCGAG +
Preference number: 6 (lower is better)
Translates to: NCVSVMRVPVTL*RFLKKESMRSE
Trigger: CTCGGATCTCATCGACTCCTTCTTGAGGAATCTCCACAGCGTCACAGGGACCCTCATGACTGACACACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp GGGTCTCCTGAGTTGGACGTTTCCCCACCAAATGATTCTCCGGGTTaGAACCGAACATCTTGGAACTCTGCTGTACTCTTCTCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: GSPELDVSPPNDSPG*NRTSWNSAVLFSRS
Trigger: AGACCTGGAGAAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAACCCGGAGAATCATTTGGTGGGGAAACGTCCAACTCAGGAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000536414.3
ENST00000540967.5
ENST00000545990.6
CDS CAA 90 bp AAACTATCTGGGAAGGCCGAAGTTAGCCTACTGGCATCTCCAGACTaGTCATCTCCCAGCTCTGCCAACGAAGCATCACAGGACTTAGCA +
Preference number: 6 (lower is better)
Translates to: KLSGKAEVSLLASPD*SSPSSANEASQDLA
Trigger: TGCTAAGTCCTGTGATGCTTCGTTGGCAGAGCTGGGAGATGACAAGTCTGGAGATGCCAGTAGGCTAACTTCGGCCTTCCCAGATAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 72 bp CCTACTGGCATCTCCAGACTTGTCATCTCCCAGCTCTaGCAACGAAGCATCACAGGACTTAGCAATGATGAC +
Preference number: 6 (lower is better)
Translates to: PTGISRLVISQL*QRSITGLSNDD
Trigger: GTCATCATTGCTAAGTCCTGTGATGCTTCGTTGGCAGAGCTGGGAGATGACAAGTCTGGAGATGCCAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 72 bp CCACCAAATGATTCTCCGGGTTTGAACCGAACATCTTaGAACTCTGCTGTACTCTTCTCCAGGTCTCTGCGG +
Preference number: 6 (lower is better)
Translates to: PPNDSPGLNRTS*NSAVLFSRSLR
Trigger: CCGCAGAGACCTGGAGAAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAACCCGGAGAATCATTTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000536414.3
ENST00000540967.5
ENST00000545990.6
CDS CCA 72 bp ATGTTCTTGCTCAGCTCAAGATCTTGTTTCTTCCTGTaGCCTTCCATGTACCTCCCCCTTGCTGGGACTGGA +
Preference number: 6 (lower is better)
Translates to: MFLLSSRSCFFL*PSMYLPLAGTG
Trigger: TCCAGTCCCAGCAAGGGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGATCTTGAGCTGAGCAAGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000540967.5
CDS CCA 72 bp TTTCTTCCTGTGGCCTTCCATGTACCTCCCCCTTGCTaGGAATTTTCAGGGAACAGGAAACTGAGAGTCAGG +
Preference number: 6 (lower is better)
Translates to: FLPVAFHVPPPC*EFSGNRKLRVR
Trigger: CCTGACTCTCAGTTTCCTGTTCCCTGAAAATTCCCAGCAAGGGGGAGGTACATGGAAGGCCACAGGAAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545990.6
CDS CAA 72 bp AACTTCCTATCTTCCTTAACTGGCTGTTCCGGCACCTaGGGTTCAGGGCTCTGGTCACGCTTGAAAATGGTC +
Preference number: 6 (lower is better)
Translates to: NFLSSLTGCSGT*GSGLWSRLKMV
Trigger: GACCATTTTCAAGCGTGACCAGAGCCCTGAACCCAAGGTGCCGGAACAGCCAGTTAAGGAAGATAGGAAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp GCATTCTGCAGGACAGCTTCTGCTGACCCTGTGCCCTaGGCTGGTAAGCACTCATATAAACTATCTGGGAAG +
Preference number: 6 (lower is better)
Translates to: AFCRTASADPVP*AGKHSYKLSGK
Trigger: CTTCCCAGATAGTTTATATGAGTGCTTACCAGCCAAGGGCACAGGGTCAGCAGAAGCTGTCCTGCAGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp GCTCAAGATCTTGTTTCTTCCTGTGGCCTTCCATGTACCTCCCCCTaGCTGGGAATTTTCAGGGAACAGGAAACTGAGAGTCAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: AQDLVSSCGLPCTSP*LGIFREQETESQER
Trigger: CCTTTCCTGACTCTCAGTTTCCTGTTCCCTGAAAATTCCCAGCAAGGGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGATCTTGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000545990.6
CDS GCA 72 bp AAGGAGTCGATGAGATCCGAGACCACCTCTTTTGCATaGTTGAGCAGAACCTTCTTCAGTAGGATGGTGGCA +
Preference number: 6 (lower is better)
Translates to: KESMRSETTSFA*LSRTFFSRMVA
Trigger: TGCCACCATCCTACTGAAGAAGGTTCTGCTCAAGCATGCAAAAGAGGTGGTCTCGGATCTCATCGACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 72 bp AGCTTCATCACTGAGTTCATCAGATGTTCTACCATCTaGCCACTCATGTGGCCATCTATCTGGCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: SFITEFIRCSTI*PLMWPSIWLTA
Trigger: GGCTGTCAGCCAGATAGATGGCCACATGAGTGGGCAGATGGTAGAACATCTGATGAACTCAGTGATGAAGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 72 bp TTAACTGGCTGTTCCGGCACCTTGGGTTCAGGGCTCTaGTCACGCTTGAAAATGGTCTCACTAAGTAAGTTC +
Preference number: 6 (lower is better)
Translates to: LTGCSGTLGSGL*SRLKMVSLSKF
Trigger: GAACTTACTTAGTGAGACCATTTTCAAGCGTGACCAGAGCCCTGAACCCAAGGTGCCGGAACAGCCAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CCA 72 bp CATATAAACTATCTGGGAAGGCCGAAGTTAGCCTACTaGCATCTCCAGACTTGTCATCTCCCAGCTCTGCCA +
Preference number: 6 (lower is better)
Translates to: HINYLGRPKLAY*HLQTCHLPALP
Trigger: TGGCAGAGCTGGGAGATGACAAGTCTGGAGATGCCAGTAGGCTAACTTCGGCCTTCCCAGATAGTTTATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp GAGTCGATGAGATCCGAGACCACCTCTTTTGCATGCTaGAGCAGAACCTTCTTCAGTAGGATGGTGGCAATG +
Preference number: 6 (lower is better)
Translates to: ESMRSETTSFAC*SRTFFSRMVAM
Trigger: CATTGCCACCATCCTACTGAAGAAGGTTCTGCTCAAGCATGCAAAAGAGGTGGTCTCGGATCTCATCGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp TGTTCCGGCACCTTGGGTTCAGGGCTCTGGTCACGCTaGAAAATGGTCTCACTAAGTAAGTTCCGGATGAAA +
Preference number: 6 (lower is better)
Translates to: CSGTLGSGLWSR*KMVSLSKFRMK
Trigger: TTTCATCCGGAACTTACTTAGTGAGACCATTTTCAAGCGTGACCAGAGCCCTGAACCCAAGGTGCCGGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp CTCAAGAAGGAGTCGATGAGATCCGAGACCACCTCTTTTGCATGCTaGAGCAGAACCTTCTTCAGTAGGATGGTGGCAATGGTTGTGTCT +
Preference number: 6 (lower is better)
Translates to: LKKESMRSETTSFAC*SRTFFSRMVAMVVS
Trigger: AGACACAACCATTGCCACCATCCTACTGAAGAAGGTTCTGCTCAAGCATGCAAAAGAGGTGGTCTCGGATCTCATCGACTCCTTCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp CTTTCACACAACTTCCTATCTTCCTTAACTGGCTGTTCCGGCACCTaGGGTTCAGGGCTCTGGTCACGCTTGAAAATGGTCTCACTAAGT +
Preference number: 6 (lower is better)
Translates to: LSHNFLSSLTGCSGT*GSGLWSRLKMVSLS
Trigger: ACTTAGTGAGACCATTTTCAAGCGTGACCAGAGCCCTGAACCCAAGGTGCCGGAACAGCCAGTTAAGGAAGATAGGAAGTTGTGTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 72 bp GCTCTTCTACCTCGGGTCTTGCCATTTTGCATGTCCTaGGTCAGTCACTGGTTAACTCTGAACTTCAGGTTC +
Preference number: 6 (lower is better)
Translates to: ALLPRVLPFCMS*VSHWLTLNFRF
Trigger: GAACCTGAAGTTCAGAGTTAACCAGTGACTGACTCAGGACATGCAAAATGGCAAGACCCGAGGTAGAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000541484.1
ENST00000544636.1
ENST00000545990.6
CDS TCA 72 bp AGACGGTCTCATTCACAAGCTCTGATGCTATCTTACTaGGGCTTTTGGTGGGTGTGGGTTCATTCCCCATGT +
Preference number: 6 (lower is better)
Translates to: RRSHSQALMLSY*GFWWVWVHSPC
Trigger: ACATGGGGAATGAACCCACACCCACCAAAAGCCTCAGTAAGATAGCATCAGAGCTTGTGAATGAGACCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp GGAAAGGTGAGCTCTTCTACCTCGGGTCTTGCCATTTaGCATGTCCTGAGTCAGTCACTGGTTAACTCTGAA +
Preference number: 6 (lower is better)
Translates to: GKVSSSTSGLAI*HVLSQSLVNSE
Trigger: TTCAGAGTTAACCAGTGACTGACTCAGGACATGCAAAATGGCAAGACCCGAGGTAGAAGAGCTCACCTTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000541484.1
ENST00000544636.1
ENST00000545990.6
CDS CAA 72 bp GAGTTGGACGTTTCCCCACCAAATGATTCTCCGGGTTaGAACCGAACATCTTGGAACTCTGCTGTACTCTTC +
Preference number: 6 (lower is better)
Translates to: ELDVSPPNDSPG*NRTSWNSAVLF
Trigger: GAAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAACCCGGAGAATCATTTGGTGGGGAAACGTCCAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000536414.3
ENST00000540967.5
ENST00000545990.6
CDS CAA 72 bp TTGTTTTCAGAGCCATCGATCTTCTCATTGATCTCTTaGCGGGCCATGGCTATGACTAGATTCGTGAGGCGG +
Preference number: 6 (lower is better)
Translates to: LFSEPSIFSLIS*RAMAMTRFVRR
Trigger: CCGCCTCACGAATCTAGTCATAGCCATGGCCCGCAAAGAGATCAATGAGAAGATCGATGGCTCTGAAAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CAA 72 bp CAAAATAGGGACATTGAGCTCAGAGGCAGCTACCCATaGAAGGACGGCTTGGAGTTGCTTGTTCTGAACTGT +
Preference number: 6 (lower is better)
Translates to: QNRDIELRGSYP*KDGLELLVLNC
Trigger: ACAGTTCAGAACAAGCAACTCCAAGCCGTCCTTCAATGGGTAGCTGCCTCTGAGCTCAATGTCCCTATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp GGATGGTCAGAGAAGTTTTATCCGAAGAGGTCACTTTaGAGCAGAGACTTGAGCTGGTGCAGACACCTGAGT +
Preference number: 6 (lower is better)
Translates to: GWSEKFYPKRSL*SRDLSWCRHLS
Trigger: ACTCAGGTGTCTGCACCAGCTCAAGTCTCTGCTCAAAAGTGACCTCTTCGGATAAAACTTCTCTGACCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544636.1
CDS CAA 90 bp CTCTCAGCCTTGTCTTGGGCTTTCCTGACATGCTCAGGGACTTTCTaGGCAAACATTACATTGTACAGCTTCCTTAGCATGGCATCCATG +
Preference number: 6 (lower is better)
Translates to: LSALSWAFLTCSGTF*ANITLYSFLSMASM
Trigger: CATGGATGCCATGCTAAGGAAGCTGTACAATGTAATGTTTGCCAAGAAAGTCCCTGAGCATGTCAGGAAAGCCCAAGACAAGGCTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp TCTTGGATAGGATGGTCAGAGAAGTTTTATCCGAAGAGGTCACTTTaGAGCAGAGACTTGAGCTGGTGCAGACACCTGAGTGTGCATTCC +
Preference number: 6 (lower is better)
Translates to: SWIGWSEKFYPKRSL*SRDLSWCRHLSVHS
Trigger: GGAATGCACACTCAGGTGTCTGCACCAGCTCAAGTCTCTGCTCAAAAGTGACCTCTTCGGATAAAACTTCTCTGACCATCCTATCCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544636.1
CDS CAA 90 bp ACCCATTCCTTTCATGGAGATGAGGGAATAACTCTCAGCCTTGTCTaGGGCTTTCCTGACATGCTCAGGGACTTTCTTGGCAAACATTAC +
Preference number: 6 (lower is better)
Translates to: THSFHGDEGITLSLV*GFPDMLRDFLGKHY
Trigger: GTAATGTTTGCCAAGAAAGTCCCTGAGCATGTCAGGAAAGCCCAAGACAAGGCTGAGAGTTATTCCCTCATCTCCATGAAAGGAATGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 72 bp ATTTTCAGGGAACAGGAAACTGAGAGTCAGGAAAGGTaGGCTCTTCTACCTCGGGTCTTGCCATTTTGCATG +
Preference number: 6 (lower is better)
Translates to: IFREQETESQER*ALLPRVLPFCM
Trigger: CATGCAAAATGGCAAGACCCGAGGTAGAAGAGCTCACCTTTCCTGACTCTCAGTTTCCTGTTCCCTGAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000541484.1
ENST00000544636.1
ENST00000545990.6
CDS TCA 72 bp AGTTGGACGTTTCCCCACCAAATGATTCTCCGGGTTTaGACCGAACATCTTGGAACTCTGCTGTACTCTTCT +
Preference number: 6 (lower is better)
Translates to: SWTFPHQMILRV*TEHLGTLLYSS
Trigger: AGAAGAGTACAGCAGAGTTCCAAGATGTTCGGTTCAAACCCGGAGAATCATTTGGTGGGGAAACGTCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000536414.3
ENST00000540967.5
ENST00000545990.6
CDS CCA 72 bp ATGTTCTTGCTCAGCTCAAGATCTTGTTTCTTCCTGTaGCCTTCCATGTACCTCCCCCTTGCTGGGAATTTT +
Preference number: 6 (lower is better)
Translates to: MFLLSSRSCFFL*PSMYLPLAGNF
Trigger: AAAATTCCCAGCAAGGGGGAGGTACATGGAAGGCCACAGGAAGAAACAAGATCTTGAGCTGAGCAAGAACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000545990.6
CDS CAA 90 bp TGGGCTTTCCTGACATGCTCAGGGACTTTCTTGGCAAACATTACATaGTACAGCTTCCTTAGCATGGCATCCATGATATCTGTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: WAFLTCSGTFLANIT*YSFLSMASMISVAF
Trigger: AAAGGCCACAGATATCATGGATGCCATGCTAAGGAAGCTGTACAATGTAATGTTTGCCAAGAAAGTCCCTGAGCATGTCAGGAAAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp TCAGGGTACTCAAAGGAAATGTCTGATGCAGGCTTACGCTGTGTGTaGGGAGCTTCAAATGCTGCATGCTGGAAACCTAGAGATTTACAT +
Preference number: 6 (lower is better)
Translates to: SGYSKEMSDAGLRCV*GASNAACWKPRDLH
Trigger: ATGTAAATCTCTAGGTTTCCAGCATGCAGCATTTGAAGCTCCCAACACACAGCGTAAGCCTGCATCAGACATTTCCTTTGAGTACCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 90 bp TTAACTGGCTGTTCCGGCACCTTGGGTTCAGGGCTCTGGTCACGCTaGAAAATGGTCTCACTAAGTAAGTTCCGGATGAAATTAAAGAAA +
Preference number: 6 (lower is better)
Translates to: LTGCSGTLGSGLWSR*KMVSLSKFRMKLKK
Trigger: TTTCTTTAATTTCATCCGGAACTTACTTAGTGAGACCATTTTCAAGCGTGACCAGAGCCCTGAACCCAAGGTGCCGGAACAGCCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 72 bp ACAGGACTTAGCAATGATGACACACAGCTTCATCACTaGGTTCATCAGATGTTCTACCATCTGCCCACTCAT +
Preference number: 6 (lower is better)
Translates to: TGLSNDDTQLHH*VHQMFYHLPTH
Trigger: ATGAGTGGGCAGATGGTAGAACATCTGATGAACTCAGTGATGAAGCTGTGTGTCATCATTGCTAAGTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp TTAGAAGGAGGCTTGTCATCTGGACCCTGTCTTTCTTaGGTGCTCTCCTTGATCTTCAAAGTGGACTTGTAT +
Preference number: 6 (lower is better)
Translates to: LEGGLSSGPCLS*VLSLIFKVDLY
Trigger: ATACAAGTCCACTTTGAAGATCAAGGAGAGCACCAAAGAAAGACAGGGTCCAGATGACAAGCCTCCTTCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp TTGTCTTGGGCTTTCCTGACATGCTCAGGGACTTTCTaGGCAAACATTACATTGTACAGCTTCCTTAGCATG +
Preference number: 6 (lower is better)
Translates to: LSWAFLTCSGTF*ANITLYSFLSM
Trigger: CATGCTAAGGAAGCTGTACAATGTAATGTTTGCCAAGAAAGTCCCTGAGCATGTCAGGAAAGCCCAAGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS TCA 72 bp ACATTACATTGTACAGCTTCCTTAGCATGGCATCCATaGTATCTGTGGCCTTTTGGCTTCCATGAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: TLHCTASLAWHP*YLWPFGFHERR
Trigger: TCTTCTCTCATGGAAGCCAAAAGGCCACAGATATCATGGATGCCATGCTAAGGAAGCTGTACAATGTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS GCA 72 bp CTTTGTGAGTCATCTCAAAATGCAATCTTTCTGGAGTaGCCTTGGTGGTGGTGTTGTAATAGTCTACAGAGA +
Preference number: 6 (lower is better)
Translates to: LCESSQNAIFLE*PWWWCCNSLQR
Trigger: TCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGATGACTCACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 72 bp TCTCAAAATGCAATCTTTCTGGAGTGCCCTTGGTGGTaGTGTTGTAATAGTCTACAGAGAAACCTTTGTGTG +
Preference number: 6 (lower is better)
Translates to: SQNAIFLECPWW*CCNSLQRNLCV
Trigger: CACACAAAGGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 72 bp GAGTCATCTCAAAATGCAATCTTTCTGGAGTGCCCTTaGTGGTGGTGTTGTAATAGTCTACAGAGAAACCTT +
Preference number: 6 (lower is better)
Translates to: ESSQNAIFLECP*WWCCNSLQRNL
Trigger: AAGGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGATGACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS CCA 72 bp ATAGAAGAAAGACTTCTTAGAAGGAGGCTTGTCATCTaGACCCTGTCTTTCTTTGGTGCTCTCCTTGATCTT +
Preference number: 6 (lower is better)
Translates to: IEERLLRRRLVI*TLSFFGALLDL
Trigger: AAGATCAAGGAGAGCACCAAAGAAAGACAGGGTCCAGATGACAAGCCTCCTTCTAAGAAGTCTTTCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000228850.6
ENST00000545990.6
CDS CAA 72 bp TCGACGCACATTTATTTACTTGGGACACACCCTATTTaGGTTTCTCTTCTCCACTTTTCCCCTCGTTCTTGT +
Preference number: 6 (lower is better)
Translates to: STHIYLLGTHPI*VSLLHFSPRSC
Trigger: ACAAGAACGAGGGGAAAAGTGGAGAAGAGAAACCAAAATAGGGTGTGTCCCAAGTAAATAAATGTGCGTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544636.1
CDS CCA 72 bp TCATCTCAAAATGCAATCTTTCTGGAGTGCCCTTGGTaGTGGTGTTGTAATAGTCTACAGAGAAACCTTTGT +
Preference number: 6 (lower is better)
Translates to: SSQNAIFLECPW*WCCNSLQRNLC
Trigger: ACAAAGGTTTCTCTGTAGACTATTACAACACCACCACCAAGGGCACTCCAGAAAGATTGCATTTTGAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000545990.6
CDS GCA 72 bp ATACTTTTAAAGTCAATGAAGATGCTGGGATGTTCTTaGTCAGCTCAAGATCTTGTTTCTTCCTGTGGCCTT +
Preference number: 6 (lower is better)
Translates to: ILLKSMKMLGCS*SAQDLVSSCGL
Trigger: AAGGCCACAGGAAGAAACAAGATCTTGAGCTGAGCAAGAACATCCCAGCATCTTCATTGACTTTAAAAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000541484.1
ENST00000545990.6
CDS CAA 72 bp TATACTTTTAAAGTCAATGAAGATGCTGGGATGTTCTaGCTCAGCTCAAGATCTTGTTTCTTCCTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: YTFKVNEDAGMF*LSSRSCFFLWP
Trigger: AGGCCACAGGAAGAAACAAGATCTTGAGCTGAGCAAGAACATCCCAGCATCTTCATTGACTTTAAAAGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000228850.6
ENST00000540967.5
ENST00000541484.1
ENST00000545990.6