Pregenerated sensors for AKAP14 (Homo sapiens)
Ensembl gene IDs: ENSG00000186471Ensembl transcript IDs: ENST00000334356.2, ENST00000371422.5, ENST00000371425.8, ENST00000371431.8, ENST00000491105.1
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CTGCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCCACACCGGTGTACCATaGTGGAGTGGTCGGCCTAAC | + |
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Preference number: 4 (lower is better) Translates to: LLRVSLLFFTPVYHAGVVHTGVP*WSGRPN Trigger: GTTAGGCCGACCACTCCAGCATGGTACACCGGTGTG...GACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CCA 90 bp | GCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGGCAGTGGTAGGTGGCTaGGGATGTCTCAGGATTCTC | + |
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Preference number: 4 (lower is better) Translates to: AESLFIVLHTGVPCWSGRAVVGG*GCLRIL Trigger: GAGAATCCTGAGACATCCCCAGCCACCTACCACTGC...CCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCAGGAGCAGTGGTAGGTaGCTGGGGATGTCTCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LLRVSLLFFTPVYHAGVVRSSGR*LGMSQD Trigger: ATCCTGAGACATCCCCAGCCACCTACCACTGCTCCT...GACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CCA 90 bp | GCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGACCGGTGTACCATGCTaGAGTGGTCGGCCTAACTTA | + |
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Preference number: 4 (lower is better) Translates to: AESLFIVLHTGVPCWSGRTGVPC*SGRPNL Trigger: TAAGTTAGGCCGACCACTCCAGCATGGTACACCGGT...CCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR TCA 90 bp | CTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGCGACCCTTTTCCACAGTaGATTCACCGTGAGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: LRVSLLFFTPVYHAGVVGDPFPQ*IHRESS Trigger: GGATGACTCACGGTGAATTCACTGTGGAAAAGGGTC...GCCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR GCA 90 bp | CTGCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCCGGCATTGTTTGGCTTaGGGCTTTGTTATCCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LLRVSLLFFTPVYHAGVVRHCLA*GFVILI Trigger: GATGAGGATAACAAAGCCGCAAGCCAAACAATGCCG...GACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR TCA 90 bp | GCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGTTTCTTTTTCCGGAGTaGGCAGATCTTCTTTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: AESLFIVLHTGVPCWSGRFLFPE*ADLLCL Trigger: CAAGCAAAGAAGATCTGCTCACTCCGGAAAAAGAAA...CCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR TCA 90 bp | GCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGCGTGAGTCATCCACTTaGTGTTTTTCAAAGGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: AESLFIVLHTGVPCWSGRRESST*CFSKGF Trigger: GAAACCCTTTGAAAAACATCAAGTGGATGACTCACG...CCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR TCA 90 bp | GCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGACAGTGAATTCACCGTaGGTCATCCACTTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AESLFIVLHTGVPCWSGRTVNSP*VIHLMF Trigger: AAACATCAAGTGGATGACTCACGGTGAATTCACTGT...CCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CCA 90 bp | CTGCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGTATTCGGCATTGTTTaGCTTGCGGCTTTGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLRVSLLFFTPVYHAGVVVFGIV*LAALLS Trigger: GGATAACAAAGCCGCAAGCCAAACAATGCCGAATAC...GACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS TCA 90 bp | CAACAATGGGTGCATCCGGTGGTTTGGTTTTGGAGACCTTCATGGTaGAGTAGGTACCAGCAGAGATTCGTGCTACGGGTAGGTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQWVHPVVWFWRPSW*SRYQQRFVLRVGQQ Trigger: CTGCTGACCTACCCGTAGCACGAATCTCTGCTGGTACCTACTTCACCATGAAGGTCTCCAAAACCAAACCACCGGATGCACCCATTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371431.8 |
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| CDS CCA 90 bp | GTGAGCAGATCTTCTTTGCTTGGAACAGGAGCAGTGGTAGGTGGCTaGGGATGTCTCAGGATTCTCTCAGTAGCTTCTCTCAGATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSRSSLLGTGAVVGG*GCLRILSVASLRLP Trigger: TGGCAATCTGAGAGAAGCTACTGAGAGAATCCTGAGACATCCCCAGCCACCTACCACTGCTCCTGTTCCAAGCAAAGAAGATCTGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371425.8 ENST00000371431.8 |
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| CDS CCA 90 bp | CGGAGTGAGCAGATCTTCTTTGCTTGGAACAGGAGCAGTGGTAGGTaGCTGGGGATGTCTCAGGATTCTCTCAGTAGCTTCTCTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: RSEQIFFAWNRSSGR*LGMSQDSLSSFSQI Trigger: AATCTGAGAGAAGCTACTGAGAGAATCCTGAGACATCCCCAGCCACCTACCACTGCTCCTGTTCCAAGCAAAGAAGATCTGCTCACTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371425.8 ENST00000371431.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGCGTGAGCAGATCTTCTTaGCTTGGAACAGGAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVSLLFFTPVYHAGVVGVSRSS*LGTGAV Trigger: CACTGCTCCTGTTCCAAGCAAAGAAGATCTGCTCAC...GCCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGCGTTTGGCTTGCGGCTTaGTTATCCTCATCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRVSLLFFTPVYHAGVVGVWLAA*LSSSIA Trigger: AGCAATGGATGAGGATAACAAAGCCGCAAGCCAAAC...GCCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGCCTTGTGTATTCGGCATaGTTTGGCTTGCGGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRVSLLFFTPVYHAGVVGLVYSA*FGLRLC Trigger: ACAAAGCCGCAAGCCAAACAATGCCGAATACACAAG...GCCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CAA 90 bp | CTGCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCTCGGCATTGTTTGGCTaGCGGCTTTGTTATCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLRVSLLFFTPVYHAGVVSALFG*RLCYPH Trigger: ATGAGGATAACAAAGCCGCAAGCCAAACAATGCCGA...GACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CAA 90 bp | CTGCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCTGTATTCGGCATTGTTaGGCTTGCGGCTTTGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LLRVSLLFFTPVYHAGVVCIRHC*ACGFVI Trigger: GATAACAAAGCCGCAAGCCAAACAATGCCGAATACA...GACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CAA 90 bp | CTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGCCTCGTAGTTCTTGTCTaGTGTATTCGGCATTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRVSLLFFTPVYHAGVVGLVVLV*CIRHCL Trigger: CAAACAATGCCGAATACACAAGACAAGAACTACGAG...GCCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CAA 90 bp | CTGCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCCTGAGAGTCTCTTTATaGTTCTTCACACCGGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LLRVSLLFFTPVYHAGVVLRVSL*FFTPVY Trigger: GTACACCGGTGTGAAGAACAATAAAGAGACTCTCAG...GACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS-3UTR CAA 90 bp | GCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCGGTTGCTTTCTGGCTTGTaGAATTTTGAGTCTCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: AESLFIVLHTGVPCWSGRLLSGL*NFESHS Trigger: TGAGTGAGACTCAAAATTCAACAAGCCAGAAAGCAA...CCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS TCA 90 bp | ACAGTGGTGATAAGCCTCACAGCTGGTATGTATTGGGCATCCCTATaGTATGCCAGTCACTGTGTTAAGCCTTCAGTGTCTGAAGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: TVVISLTAGMYWASL*YASHCVKPSVSEVI Trigger: AATGACTTCAGACACTGAAGGCTTAACACAGTGACTGGCATATCATAGGGATGCCCAATACATACCAGCTGTGAGGCTTATCACCACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371425.8 |
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| CDS-3UTR CAA 90 bp | CTGCTGAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTGGAGTGGTCTGTTATCCTCATCCATaGCTTTCTGGCTTGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LLRVSLLFFTPVYHAGVVCYPHP*LSGLLN Trigger: ATTCAACAAGCCAGAAAGCAATGGATGAGGATAACA...GACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS TCA 72 bp | GTGCATCCGGTGGTTTGGTTTTGGAGACCTTCATGGTaGAGTAGGTACCAGCAGAGATTCGTGCTACGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VHPVVWFWRPSW*SRYQQRFVLRV Trigger: TACCCGTAGCACGAATCTCTGCTGGTACCTACTTCACCATGAAGGTCTCCAAAACCAAACCACCGGATGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371431.8 |
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| CDS CCA 72 bp | CAGATCTTCTTTGCTTGGAACAGGAGCAGTGGTAGGTaGCTGGGGATGTCTCAGGATTCTCTCAGTAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QIFFAWNRSSGR*LGMSQDSLSSF Trigger: GAAGCTACTGAGAGAATCCTGAGACATCCCCAGCCACCTACCACTGCTCCTGTTCCAAGCAAAGAAGATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371425.8 ENST00000371431.8 |
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| CDS CAA 90 bp | GGTGGCTGGGGATGTCTCAGGATTCTCTCAGTAGCTTCTCTCAGATaGCCAGATGGAATGTTTGCAAGTGCTAGCTTCTCTTCAGCCGAA | + |
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Preference number: 6 (lower is better) Translates to: GGWGCLRILSVASLR*PDGMFASASFSSAE Trigger: TTCGGCTGAAGAGAAGCTAGCACTTGCAAACATTCCATCTGGCAATCTGAGAGAAGCTACTGAGAGAATCCTGAGACATCCCCAGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000371425.8 ENST00000371431.8 |
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| CDS CCA 72 bp | CATGCCAGGAAGAACAGTGGTGATAAGCCTCACAGCTaGTATGTATTGGGCATCCCTATGATATGCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: HARKNSGDKPHS*YVLGIPMICQS Trigger: TGACTGGCATATCATAGGGATGCCCAATACATACCAGCTGTGAGGCTTATCACCACTGTTCTTCCTGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371425.8 |
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| CDS CAA 72 bp | TACCAGCAGAGATTCGTGCTACGGGTAGGTCAGCAGTaGAGATACTCCAGTGTACATAGTAGATGTAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: YQQRFVLRVGQQ*RYSSVHSRCRG Trigger: TCCTCTACATCTACTATGTACACTGGAGTATCTCAACTGCTGACCTACCCGTAGCACGAATCTCTGCTGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371431.8 |
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| CDS CAA 72 bp | GGATGTCTCAGGATTCTCTCAGTAGCTTCTCTCAGATaGCCAGATGGAATGTTTGCAAGTGCTAGCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GCLRILSVASLR*PDGMFASASFS Trigger: AGAGAAGCTAGCACTTGCAAACATTCCATCTGGCAATCTGAGAGAAGCTACTGAGAGAATCCTGAGACATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371425.8 ENST00000371431.8 |
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| CDS CAA 90 bp | CTTGAGTCAATTCATCCTCGTAGTTCTTGTCTTGTGTATTCGGCATaGTTTGGCTTGCGGCTTTGTTATCCTCATCCATTGCTTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LESIHPRSSCLVYSA*FGLRLCYPHPLLSG Trigger: GCCAGAAAGCAATGGATGAGGATAACAAAGCCGCAAGCCAAACAATGCCGAATACACAAGACAAGAACTACGAGGATGAATTGACTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371422.5 ENST00000371425.8 ENST00000371431.8 |
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| CDS GCA 72 bp | GAGAGTCTCTTTATTGTTCTTCACACCGGTGTACCATaGTGGAGTGGTCGGCCTAACTTACCGAAAAATATT | + |
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Preference number: 6 (lower is better) Translates to: ESLFIVLHTGVP*WSGRPNLPKNI Trigger: AATATTTTTCGGTAAGTTAGGCCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS CCA 72 bp | AGTCTCTTTATTGTTCTTCACACCGGTGTACCATGCTaGAGTGGTCGGCCTAACTTACCGAAAAATATTCGT | + |
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Preference number: 6 (lower is better) Translates to: SLFIVLHTGVPC*SGRPNLPKNIR Trigger: ACGAATATTTTTCGGTAAGTTAGGCCGACCACTCCAGCATGGTACACCGGTGTGAAGAACAATAAAGAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS CAA 90 bp | AGTCAATTCATCCTCGTAGTTCTTGTCTTGTGTATTCGGCATTGTTaGGCTTGCGGCTTTGTTATCCTCATCCATTGCTTTCTGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SQFILVVLVLCIRHC*ACGFVILIHCFLAC Trigger: ACAAGCCAGAAAGCAATGGATGAGGATAACAAAGCCGCAAGCCAAACAATGCCGAATACACAAGACAAGAACTACGAGGATGAATTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371422.5 ENST00000371425.8 ENST00000371431.8 |
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| CDS CAA 90 bp | CATGCTGGAGTGGTCGGCCTAACTTACCGAAAAATATTCGTCAATTaGTTTAAGACCCTTTTCCACAGTGAATTCACCGTGAGTCATCCA | + |
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Preference number: 6 (lower is better) Translates to: HAGVVGLTYRKIFVN*FKTLFHSEFTVSHP Trigger: TGGATGACTCACGGTGAATTCACTGTGGAAAAGGGTCTTAAACAAATTGACGAATATTTTTCGGTAAGTTAGGCCGACCACTCCAGCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS CAA 72 bp | TTGTCTTGTGTATTCGGCATTGTTTGGCTTGCGGCTTaGTTATCCTCATCCATTGCTTTCTGGCTTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LSCVFGIVWLAA*LSSSIAFWLVE Trigger: TTCAACAAGCCAGAAAGCAATGGATGAGGATAACAAAGCCGCAAGCCAAACAATGCCGAATACACAAGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371422.5 ENST00000371425.8 ENST00000371431.8 |
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| CDS CAA 72 bp | ATCCTCGTAGTTCTTGTCTTGTGTATTCGGCATTGTTaGGCTTGCGGCTTTGTTATCCTCATCCATTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: ILVVLVLCIRHC*ACGFVILIHCF Trigger: AAAGCAATGGATGAGGATAACAAAGCCGCAAGCCAAACAATGCCGAATACACAAGACAAGAACTACGAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371422.5 ENST00000371425.8 ENST00000371431.8 |
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| CDS CAA 72 bp | ATTCATCCTCGTAGTTCTTGTCTTGTGTATTCGGCATaGTTTGGCTTGCGGCTTTGTTATCCTCATCCATTG | + |
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Preference number: 6 (lower is better) Translates to: IHPRSSCLVYSA*FGLRLCYPHPL Trigger: CAATGGATGAGGATAACAAAGCCGCAAGCCAAACAATGCCGAATACACAAGACAAGAACTACGAGGATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371422.5 ENST00000371425.8 ENST00000371431.8 |
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| CDS CAA 72 bp | AGCTACTTGAGTCAATTCATCCTCGTAGTTCTTGTCTaGTGTATTCGGCATTGTTTGGCTTGCGGCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SYLSQFILVVLV*CIRHCLACGFV Trigger: AACAAAGCCGCAAGCCAAACAATGCCGAATACACAAGACAAGAACTACGAGGATGAATTGACTCAAGTAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371422.5 ENST00000371425.8 ENST00000371431.8 |
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| CDS CAA 90 bp | ATTCATCCTCGTAGTTCTTGTCTTGTGTATTCGGCATTGTTTGGCTaGCGGCTTTGTTATCCTCATCCATTGCTTTCTGGCTTGTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: IHPRSSCLVYSALFG*RLCYPHPLLSGLLN Trigger: ATTCAACAAGCCAGAAAGCAATGGATGAGGATAACAAAGCCGCAAGCCAAACAATGCCGAATACACAAGACAAGAACTACGAGGATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371422.5 ENST00000371425.8 ENST00000371431.8 |
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| CDS GCA 72 bp | TCCATGAAACTATATTTGGCATCAGTAAGATTCTTCTaGCAGTTTTCTCGAAAGCGAACCATTCCTGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SMKLYLASVRFF*QFSRKRTIPGL Trigger: CAGACCAGGAATGGTTCGCTTTCGAGAAAACTGGCAGAAGAATCTTACTGATGCCAAATATAGTTTCATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371425.8 ENST00000371431.8 ENST00000491105.1 |
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| CDS CAA 72 bp | GTGGTCGGCCTAACTTACCGAAAAATATTCGTCAATTaGTTTAAGACCCTTTTCCACAGTGAATTCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: VVGLTYRKIFVN*FKTLFHSEFTV Trigger: CACGGTGAATTCACTGTGGAAAAGGGTCTTAAACAAATTGACGAATATTTTTCGGTAAGTTAGGCCGACCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371422.5 |
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| CDS CAA 90 bp | CAGACACGATTGAATAAGAAGGGGAATGACTCCATGAAACTATATTaGGCATCAGTAAGATTCTTCTGCCAGTTTTCTCGAAAGCGAACC | + |
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Preference number: 6 (lower is better) Translates to: QTRLNKKGNDSMKLY*ASVRFFCQFSRKRT Trigger: GGTTCGCTTTCGAGAAAACTGGCAGAAGAATCTTACTGATGCCAAATATAGTTTCATGGAGTCATTCCCCTTCTTATTCAATCGTGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371425.8 ENST00000371431.8 ENST00000491105.1 |
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| CDS CAA 72 bp | AACAACAATGGGTGCATCCGAAAAATATTCGTCAATTaGTTTAAGACCCTTTTCCACAGTGAATTCACCGTG | + |
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Preference number: 6 (lower is better) Translates to: NNNGCIRKIFVN*FKTLFHSEFTV Trigger: CACGGTGAATTCACTGTGGAAAAGGGTCTTAAACAAATTGACGAATATTTTTCGGATGCACCCATTGTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000334356.2 ENST00000371425.8 |
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| CDS CAA 72 bp | TTGAATAAGAAGGGGAATGACTCCATGAAACTATATTaGGCATCAGTAAGATTCTTCTGCCAGTTTTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: LNKKGNDSMKLY*ASVRFFCQFSR Trigger: TCGAGAAAACTGGCAGAAGAATCTTACTGATGCCAAATATAGTTTCATGGAGTCATTCCCCTTCTTATTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371425.8 ENST00000371431.8 ENST00000491105.1 |
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| CDS CAA 90 bp | GATGAGAAAAACAATCCTAAGACATCCTGTAAGTATCAGACACGATaGAATAAGAAGGGGAATGACTCCATGAAACTATATTTGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: DEKNNPKTSCKYQTR*NKKGNDSMKLYLAS Trigger: TGATGCCAAATATAGTTTCATGGAGTCATTCCCCTTCTTATTCAATCGTGTCTGATACTTACAGGATGTCTTAGGATTGTTTTTCTCATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371425.8 ENST00000371431.8 ENST00000491105.1 |
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| CDS CAA 72 bp | AACAATCCTAAGACATCCTGTAAGTATCAGACACGATaGAATAAGAAGGGGAATGACTCCATGAAACTATAT | + |
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Preference number: 6 (lower is better) Translates to: NNPKTSCKYQTR*NKKGNDSMKLY Trigger: ATATAGTTTCATGGAGTCATTCCCCTTCTTATTCAATCGTGTCTGATACTTACAGGATGTCTTAGGATTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000334356.2 ENST00000371425.8 ENST00000371431.8 ENST00000491105.1 |
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