RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP13 (Homo sapiens)

Ensembl gene IDs: ENSG00000170776

Ensembl transcript IDs: ENST00000361243.6, ENST00000394510.6, ENST00000394518.7, ENST00000557852.2, ENST00000558009.1, ENST00000558092.1, ENST00000558166.2, ENST00000558644.2, ENST00000558811.2, ENST00000559278.1, ENST00000559362.5, ENST00000559391.1, ENST00000559486.2, ENST00000559820.1, ENST00000560256.1, ENST00000560302.5, ENST00000560340.5, ENST00000560482.5, ENST00000560571.1, ENST00000560579.5, ENST00000560676.5, ENST00000560957.1, ENST00000612418.1

Found 1685 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCCCTGGCAGTGGTGTGCCCTCACCCAGCAAGGGCCAGACAGCTaGTGTCTGGGAGAGGCACGACGGGGGCTCAGGAACACAGCCAGG +
Preference number: 1 (lower is better)
Translates to: DPWQWCALTQQGPDS*CLGEARRGLRNTAR
Trigger: CCTGGCTGTGTTCCTGAGCCCCCGTCGTGCCTCTCCCAGACAGCAGCTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp TCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: SRTWGRPGGLDAEEQ*ASSVRDLCTRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp AGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCAGTaGTGTGCCCTCACCCAGCAAGGGCCAGACAGCTGCTGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: STASAWPGCEADPWQ*CALTQQGPDSCCLG
Trigger: TCCCAGACAGCAGCTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GTCCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTaGCCCCTGGCAGTGGTGTGCCCTCACCCAGCAAGGGCCAGACAG +
Preference number: 1 (lower is better)
Translates to: VLASEHSFCLAWVRG*PLAVVCPHPARARQ
Trigger: CTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp CTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTaGCAGTGGTGTGCCCTCACCCAGCAAGGGCCAGACAGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: LQSTASAWPGCEADP*QWCALTQQGPDSCC
Trigger: ACAGCAGCTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp ATGCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCCC +
Preference number: 1 (lower is better)
Translates to: MRGLRVRPGTALVLS*PDAWCRLGLLLAFP
Trigger: GGGGAATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp GGGGTGAGTGCTTCCTGCAGAAGCCCCTCCGGACTGCAGCACAGGTaGTCCCACCTGGTTGTAGGGCAGGTCACTCACTTCGGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: GVSASCRSPSGLQHR*SHLVVGQVTHFGGR
Trigger: CCTGCCACCGAAGTGAGTGACCTGCCCTACAACCAGGTGGGACCACCTGTGCTGCAGTCCGGAGGGGCTTCTGCAGGAAGCACTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp TTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTaGGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGG +
Preference number: 1 (lower is better)
Translates to: LLIVQDLGPPRRTGR*GAVGVQCKRLVHAG
Trigger: CCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp CCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGGCTCCGGGTCCGTCCAGGCACTGCC +
Preference number: 1 (lower is better)
Translates to: PGMGLEGNQSLRSTG*TADMRGLRVRPGTA
Trigger: GGCAGTGCCTGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp AAGCCTGAACCACAGGCAGACTCACCAGGCACGCCCCATGGCCTGTaGTCATGCCCTCAGGTGGTGACGAAAGGTAGGGGAAGCTCAGGC +
Preference number: 1 (lower is better)
Translates to: KPEPQADSPGTPHGL*SCPQVVTKGRGSSG
Trigger: GCCTGAGCTTCCCCTACCTTTCGTCACCACCTGAGGGCATGAGCACAGGCCATGGGGCGTGCCTGGTGAGTCTGCCTGTGGTTCAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: GFRGKPVSEEYWVNC*YAGAPGPSRHCPCA
Trigger: AGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCTCTAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp CAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATATCATCTGTTaGTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCT +
Preference number: 1 (lower is better)
Translates to: QSLGLLPHPTLNIIC*LLSRTWGRPGGLDA
Trigger: AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp ACGCCTTCCGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTaGTACACATGGCTTCACCCTTCGCCTGAACCCACTTCTCAGCCA +
Preference number: 1 (lower is better)
Translates to: TPSGPAPLQICTGRN*YTWLHPSPEPTSQP
Trigger: TGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCGGAAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp GGCGCTTTCACAACCACGCCTTCCGGGCCAGCTCCTCTCCAGATCTaGACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGCCTGAA +
Preference number: 1 (lower is better)
Translates to: GAFTTTPSGPAPLQI*TGRNCYTWLHPSPE
Trigger: TTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCGGAAGGCGTGGTTGTGAAAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp GGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATaGCTTCACCCTTCGCCTGAACCCACTTCTCAGCCAGCTGTCCTA +
Preference number: 1 (lower is better)
Translates to: GPAPLQICTGRNCYT*LHPSPEPTSQPAVL
Trigger: TAGGACAGCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp GGCACCCGGCCTACATTTACAAGGAGAAGAATGCAGGTTCAGTACTaGCCTCCTGCAAATCCCAGGAGGGGAACTCGGAGCCAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: GTRPTFTRRRMQVQY*PPANPRRGTRSQCP
Trigger: TGGGCACTGGCTCCGAGTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAAATGTAGGCCGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp GGTCCTGCTGAAGGAAGGCAAGGCACACAGATCTCCAGCAGCCGCTaGCCCAATTCCATCCACAGGGTTATTTCTAGGCTCCCACATTCC +
Preference number: 1 (lower is better)
Translates to: GPAEGRQGTQISSSR*PNSIHRVISRLPHS
Trigger: GGAATGTGGGAGCCTAGAAATAACCCTGTGGATGGAATTGGGGCAGCGGCTGCTGGAGATCTGTGTGCCTTGCCTTCCTTCAGCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTT +
Preference number: 1 (lower is better)
Translates to: DLHWQELLHMASPFA*THFSASCPSFRAQL
Trigger: AAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp CCCACATTCCAAGGACATCCAAAACGCAGAGGGTGCACATCGTTCTaGAGTGTCTGGGGTCACCTCACAGCCACCCTCTTTGTGACCACT +
Preference number: 1 (lower is better)
Translates to: PTFQGHPKRRGCTSF*SVWGHLTATLFVTT
Trigger: AGTGGTCACAAAGAGGGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGATGTGCACCCTCTGCGTTTTGGATGTCCTTGGAATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GAGGCCATTACTTTCAGTGTAATCCTGAGTAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGTCTGG +
Preference number: 1 (lower is better)
Translates to: EAITFSVILSRASPT*ESWAVTNHGRSRVW
Trigger: CCAGACTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCTACTCAGGATTACACTGAAAGTAATGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp CAAGACAGGCCATTAGATCCAGCAACTAGAGCACTGTCAAGGCCATaGGCAAAAGCACAGGCAGCCACCATCCCAGGTAAATCCCCAGGA +
Preference number: 1 (lower is better)
Translates to: QDRPLDPATRALSRP*AKAQAATIPGKSPG
Trigger: TCCTGGGGATTTACCTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTGCTGGATCTAATGGCCTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GCTCTGTGGCGACGTGCTCTAACTTCAGCATCCACGGTGTTTTTGTaGAGAGCACGTACGCAAGTAAATCCCATCAGCACCAACCTCGTA +
Preference number: 1 (lower is better)
Translates to: ALWRRALTSASTVFL*RARTQVNPISTNLV
Trigger: TACGAGGTTGGTGCTGATGGGATTTACTTGCGTACGTGCTCTTCACAAAAACACCGTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp TCCCACCCTCTACTAAGGCAGGGTCTATCTAGTTCAACCCTTGCATaGACTAACACCTCCCCTCCCACATCAAGAAACAACGCCAAAGGT +
Preference number: 1 (lower is better)
Translates to: SHPLLRQGLSSSTLA*TNTSPPTSRNNAKG
Trigger: ACCTTTGGCGTTGTTTCTTGATGTGGGAGGGGAGGTGTTAGTGCATGCAAGGGTTGAACTAGATAGACCCTGCCTTAGTAGAGGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GGGTGGACTCTACAGGGCAATGGTGTGACTGACCAGCTCTTTCATTaGAGACATAGAAAGTACAAGCAGACCCTTCTGGCAGGAGCTCTA +
Preference number: 1 (lower is better)
Translates to: GWTLQGNGVTDQLFH*RHRKYKQTLLAGAL
Trigger: TAGAGCTCCTGCCAGAAGGGTCTGCTTGTACTTTCTATGTCTTCAATGAAAGAGCTGGTCAGTCACACCATTGCCCTGTAGAGTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 90 bp GTGGTTTCTCAGAGCACACCCTGTTCTCATGCTCCTCCCACTCACTaGCCAATCTTTCCTCTCCTTCACTTCCAGGCTATCTTTAGAGAA +
Preference number: 1 (lower is better)
Translates to: VVSQSTPCSHAPPTH*PIFPLLHFQAIFRE
Trigger: TTCTCTAAAGATAGCCTGGAAGTGAAGGAGAGGAAAGATTGGGCAGTGAGTGGGAGGAGCATGAGAACAGGGTGTGCTCTGAGAAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CCA 90 bp GCCTCAGAGGGCAACATTACCATGAACTGTCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAACAAAGATGAAAACACGGTGGGAAAA +
Preference number: 1 (lower is better)
Translates to: ASEGNITMNCPAHTS*GKPQVNKDENTVGK
Trigger: TTTTCCCACCGTGTTTTCATCTTTGTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTAATGTTGCCCTCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp AAAAGACACAGAGTGAACAGTGCTGGCTGCCACTTCACTCGGTATTaGCTGGATAGTTTAGACTGTTGGGCTAGACCTGGCTCACCCTTA +
Preference number: 1 (lower is better)
Translates to: KRHRVNSAGCHFTRY*LDSLDCWARPGSPL
Trigger: TAAGGGTGAGCCAGGTCTAGCCCAACAGTCTAAACTATCCAGTCAATACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp GGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCACGGTGTTTTTGTGAAGAGCACGTAC +
Preference number: 1 (lower is better)
Translates to: GVRDPLTLMSSSVAT*SNFSIHGVFVKSTY
Trigger: GTACGTGCTCTTCACAAAAACACCGTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp GGTTCTGTTGCTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTaGTTTGAGGGAATTCCGGGCACTACTTTGATTTTAAACTTGTCC +
Preference number: 1 (lower is better)
Translates to: GSVAALQTVFLDEVG*FEGIPGTTLILNLS
Trigger: GGACAAGTTTAAAATCAAAGTAGTGCCCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAGCAACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp CATAGGGAGGGCCAACAGATAAAGTCAGTAAGAGTGACACTAACCTaGTTAAGGAAGTGTGTGGTTTCTCAGAGCACACCCTGTTCTCAT +
Preference number: 1 (lower is better)
Translates to: HREGQQIKSVRVTLT*LRKCVVSQSTPCSH
Trigger: ATGAGAACAGGGTGTGCTCTGAGAAACCACACACTTCCTTAACCAGGTTAGTGTCACTCTTACTGACTTTATCTGTTGGCCCTCCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 90 bp GGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTaGACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTT +
Preference number: 1 (lower is better)
Translates to: GCFVALVPETPRSRW*TSRLLYTSSLLSLV
Trigger: AACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTaGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTG +
Preference number: 1 (lower is better)
Translates to: MGCFVALVPETPRSR*CTSRLLYTSSLLSL
Trigger: CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp TTAAAATTTCATCTGGGCCTTCAAGGCACTTCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACTTCACTCGGTATTGACTGGATAGTT +
Preference number: 1 (lower is better)
Translates to: LKFHLGLQGTSKDTE*TVLAATSLGIDWIV
Trigger: AACTATCCAGTCAATACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGAAGTGCCTTGAAGGCCCAGATGAAATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GATGACAGAATGAGATACTATGGGTTGTTTTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACAC +
Preference number: 1 (lower is better)
Translates to: DDRMRYYGLFCCFSA*NTEIEVVHITSFIH
Trigger: GTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGTATCTCATTCTGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTaGGTAAACATGCTGGAAAACCAGGATATTTCTTCTGGATCTGAT +
Preference number: 1 (lower is better)
Translates to: IMVSRPLHFIHGQNM*VNMLENQDISSGSD
Trigger: ATCAGATCCAGAAGAAATATCCTGGTTTTCCAGCATGTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CAA 90 bp TATGCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCC +
Preference number: 2 (lower is better)
Translates to: YAGAPGPSRHCPCAK*TRRLVQTGPSSGIP
Trigger: GGGAATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 2 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 90 bp CTGGGCCTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: LGLLPHPTLNIICCL*SRTWGRPGGLDAEE
Trigger: CTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CAA 90 bp GCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATATCATCTGTaGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGC +
Preference number: 2 (lower is better)
Translates to: AESGPPSPPDTQYHL*LIVQDLGPPRRTGR
Trigger: GCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATCAGAGCACAGCTTCTaGCTGGCCTGGGTGCGAGGC +
Preference number: 2 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQESEHSF*LAWVRG
Trigger: GCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCCTTCTGAGTGGTCAGTaGCAATCAAAAGGTGTCACG +
Preference number: 2 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGLLSGQ*QSKGVT
Trigger: CGTGACACCTTTTGATTGTCACTGACCACTCAGAAG...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 2 (lower is better)
Translates to: RASSSPDLHWQELLHMASGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 2 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNLLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGGCCTTTAGGAATTCCTaGCGTGTCCAAAACCATCAC +
Preference number: 2 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQAFRNS*RVQNHH
Trigger: GTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGC...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAALVLS*PDAWCR
Trigger: TCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CAA 90 bp CTGCAGTGTCTGGGGTCACCTCACAGCCACCCTCTTTGTGACCACTaGAAGCCCATTCACCAGGACTGTCTTTCTAAACTCCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LQCLGSPHSHPLCDH*KPIHQDCLSKLPPR
Trigger: CCTGGGAGGGAGTTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCTGTGAGGTGACCCCAGACACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGG +
Preference number: 2 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILRSTG*TADMRG
Trigger: CCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCATGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 2 (lower is better)
Translates to: RASSSPDLHWQELLHMASCCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRASPFA*THFSAS
Trigger: GCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGC...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACT +
Preference number: 2 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQESKDTE*TVLAAT
Trigger: AGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 2 (lower is better)
Translates to: SSSPDLHWQELLHMASPFHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 2 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCGCACTGTCAAGGCCATaGGCAAAAGCACAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVALSRP*AKAQAA
Trigger: GGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGC...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 2 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCCGAGATCGAGGTGGTaGACATCACGTCTTTTATAC +
Preference number: 2 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCPRSRW*TSRLLY
Trigger: GTATAAAAGACGTGATGTGCACCACCTCGATCTCGG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 2 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQDWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 2 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLDWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 2 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAAC +
Preference number: 2 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCPAHTS*GKPQVN
Trigger: GTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGG...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAAAGGTAGGTCAGAGGTaGCGAGTTTCTTCATTCTCA +
Preference number: 2 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEKVGQR*RVSSFS
Trigger: TGAGAATGAAGAAACTCGCCACCTCTGACCTACCTT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACA +
Preference number: 2 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRRASPT*ESWAVT
Trigger: TGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 2 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSCCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTTCCCCGTGTGTATATaGAGACAGGTCCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEFPVCI*RQVPMY
Trigger: GTACATGGGGACCTGTCTGCATATACACACGGGGAA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCAC +
Preference number: 2 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVSSVAT*SNFSIH
Trigger: GTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCT...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 2 (lower is better)
Translates to: DVSKTITCTYEAITFSVIGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCAGGAACTGCTACACATaGCTTCACCCTTCGCCTGAA +
Preference number: 2 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSRNCYT*LHPSPE
Trigger: TTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCT...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTTTCCCCGTGTGTATATaGAGACAGGTCCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCFPVCI*RQVPMY
Trigger: GTACATGGGGACCTGTCTGCATATACACACGGGGAA...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 2 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCATCAGTACTGCCCTCCTaGAAATCCCAGGAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSSVLPS*KSQEGN
Trigger: GTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGA...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGTTCTGTTGCTGCACTaGAGACTGTATTCCTGGATG +
Preference number: 2 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSVLLLH*RLYSWM
Trigger: CATCCAGGAATACAGTCTGCAGTGCAGCAACAGAAC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 2 (lower is better)
Translates to: FQPLGIPDVSKTITCTYELLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGGTTCAGACCTTACTTaGATACACTCTTTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLGSDLT*IHSFSL
Trigger: AAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAAGACCCACAGGAAGGTaGCGTGCCACTCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQRPTGR*RATLLG
Trigger: CCCAAGGAGAGTGGCACGTCACCTTCCTGTGGGTCT...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: YADRSPCTYTDQVQNICCGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCCAAATCGTTTTGAGTaGGGTCTGGGCAGATGTGAA +
Preference number: 2 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVPNRFE*GLGRCE
Trigger: TTCACATCTGCCCAGACCCCACTCAAAACGATTTGG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGAGGGAAACCAGTCTCTaGGGAGTACTGGGTGAACTG +
Preference number: 2 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLRETSL*GVLGEL
Trigger: CAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGGCGGGTGGATTGCCTaGGCTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSGGWIA*AQEFKT
Trigger: GGTCTTGAACTCCTGAGCTCAGGCAATCCACCCGCC...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGATAAATATCTCCATCTaGAAGGCCAGCTTGCAATTC +
Preference number: 2 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQINISI*KASLQF
Trigger: GAATTGCAAGCTGGCCTTGCAGATGGAGATATTTAT...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGAAGGTAGGTCAGAGGTaGCGAGTTTCTTCATTCTCA +
Preference number: 2 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRKVGQR*RVSSFS
Trigger: TGAGAATGAAGAAACTCGCCACCTCTGACCTACCTT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAAGGTGGAGGCTGCAGTaGGCCGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATERWRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCGGCTCACTGCAGCCTCCACCT...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGGTAAGCGGTTCTGTTaGTGCACTGCAGACTGTATT +
Preference number: 2 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSGKRFC*CTADCI
Trigger: AATACAGTCTGCAGTGCAGCAACAGAACCGCTTACC...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACCGAGATTGCACCATTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSPRLHH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGGTGCAATCTCGG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 90 bp ACCTCCCCTCCCACATCAAGAAACAACGCCAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTGAGGCCTCAGGAAGGTAACAAATAC +
Preference number: 2 (lower is better)
Translates to: TSPPTSRNNAKGLKT*CSRLILRPQEGNKY
Trigger: GTATTTGTTACCTTCCTGAGGCCTCAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTTGGCGTTGTTTCTTGATGTGGGAGGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAGTGATTTCTTTAGCTTaGTGGAGAACATGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKVISLA*WRTWCP
Trigger: GGGACACCATGTTCTCCATCAAGCTAAAGAAATCAC...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATATGGGACACCGTTCTaGCGGCTGACCACAGGTTTA +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQYGTPF*RLTTGL
Trigger: TAAACCTGTGGTCAGCCGTCAGAACGGTGTCCCATA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAATTACAAGGAGAAGAATaGAGGTTCAGTACTGCCCTC +
Preference number: 2 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKLQGEE*RFSTAL
Trigger: GAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAA...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAACACAGGAAGGTGACGTaGCACTCTCCTTGGGTAATC +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQHRKVT*HSPWVI
Trigger: GATTACCCAAGGAGAGTGGCACGTCACCTTCCTGTG...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATTTCTCCTCAGGAACTaGTCACCTGTGGGGAGAGTG +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQFLLRN*SPVGRV
Trigger: CACTCTCCCCACAGGTGAGCAGTTCCTGAGGAGAAA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACCAGGAGATGGAGGTTaGAGTGAGCCGAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSPGDGG*SEPRLH
Trigger: GTGCAATCTCGGCTCACTGCAACCTCCATCTCCTGG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCATATTTTTGAAAAAGTaGAGTTCTGGCCGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPIFLKK*SSGRAQ
Trigger: CTGCGCCCGGCCAGAACTCCACTTTTTCAAAAATAT...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCACACCTGTGGGGAGAGTaGCTTGTGGTCTGCTTACCC +
Preference number: 2 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPHLWGE*LVVCLP
Trigger: GGGTAAGCAGACCACAAGTCACTCTCCCCACAGGTG...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACTGACAGTATGCACCTaGCAGTATGGGACACCGTTC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSLTVCT*QYGTPF
Trigger: GAACGGTGTCCCATACTGTCAGGTGCATACTGTCAG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGTACCATGAACTGTCCTaGACACACCAGCTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: ISPSARPACNSSISTKLQYHELS*THQLGK
Trigger: TTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTA...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATGGCTCAGGCCCCTCTaGGTATTTCTCCTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATEWLRPL*VFLLRN
Trigger: GTTCCTGAGGAGAAATACCCAGAGGGGCCTGAGCCA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCCACACCCTGTTCTCATaGTCCTCCCACTCACTGCCC +
Preference number: 2 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPHTLFS*SSHSLP
Trigger: GGGCAGTGAGTGGGAGGAGCATGAGAACAGGGTGTG...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTACACCGAGATCGAGGTaGTGCACATCACGTCTTTTA +
Preference number: 2 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGITPRSR*CTSRLL
Trigger: TAAAAGACGTGATGTGCACCACCTCGATCTCGGTGT...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACACACCGAGATCGAGGTaGTGCACATCACGTCTTTTA +
Preference number: 2 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNTPRSR*CTSRLL
Trigger: TAAAAGACGTGATGTGCACCACCTCGATCTCGGTGT...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATTCAATACTCAAGGCTaGGTGGACTCTACAGGGCAA +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQFNTQG*VDSTGQ
Trigger: TTGCCCTGTAGAGTCCACCCAGCCTTGAGTATTGAA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAATGCACCTGACAGTATaGGACACCGTTCTGACGGCT +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATEMHLTV*DTVLTA
Trigger: AGCCGTCAGAACGGTGTCCCATACTGTCAGGTGCAT...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAA +
Preference number: 2 (lower is better)
Translates to: FVFPQIKGIRRFRPY*DTLFQPLGIPDVSK
Trigger: TTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAAGAGTGACACTAACCTaGTTAAGGAAGTGTGTGGTT +
Preference number: 2 (lower is better)
Translates to: ISGLPNRSIGLELRRETGRVTLT*LRKCVV
Trigger: AACCACACACTTCCTTAACCAGGTTAGTGTCACTCT...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCTGTTCAAATTTGGTTTaGCCTTTGTTAGCACTGCTT +
Preference number: 2 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPCSNLV*PLLALL
Trigger: AAGCAGTGCTAACAAAGGCCAAACCAAATTTGAACA...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATTGAGAGATCAAATCTaGAATCCAGACCCACAGGAA +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQLRDQI*NPDPQE
Trigger: TTCCTGTGGGTCTGGATTTCAGATTTGATCTCTCAA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 90 bp ACAACATGCTTAACAGCTCAATTGAAGAACCTAGAAGAGATGCCATaGAGGCCACTTTCCTACAGTAATTCTAAGATTTACGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: TTCLTAQLKNLEEMP*RPLSYSNSKIYAAS
Trigger: AGAGGCTGCGTAAATCTTAGAATTACTGTAGGAAAGTGGCCTCAATGGCATCTCTTCTAGGTTCTTCAATTGAGCTGTTAAGCATGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATCGTTCAATTGGACTTaGACTCAGAAGGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATESFNWT*TQKGNW
Trigger: CCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATATCCAGGTAGAATCTaGCAGTATGCACCTGACAGT +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATEYPGRI*QYAPDS
Trigger: ACTGTCAGGTGCATACTGTCAGATTCTACCTGGATA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAGAGAGAAAGAGGAAGTaGTATGTCCAAAGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQERKRK*YVQSFR
Trigger: TCTGAAACTTTGGACATATCACTTCCTCTTTCTCTC...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAACTAGGGTCATTTCGCTaGAACAACATGCTTAACAGC +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATELGSFR*NNMLNS
Trigger: GCTGTTAAGCATGTTGTTGCAGCGAAATGACCCTAG...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCAAGCCTTCTCTCACTaGTTTCACAAATGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNQAFSH*FHKCLS
Trigger: TGACAAACATTTGTGAAACCAGTGAGAGAAGGCTTG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAATAAACACCCAAAAGTaGGATTACTGGGTCATACGC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSINTQK*DYWVIR
Trigger: GCGTATGACCCAGTAATCCCACTTTTGGGTGTTTAT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCATTCGCTGCAACAACATaGTTAACAGCTCAATTGAAG +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSFAATT*LTAQLK
Trigger: CTTCAATTGAGCTGTTAAGCATGTTGTTGCAGCGAA...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 90 bp CTTCTGTATTCACTCAGTGAGGGAAATCTGGGTTATTTCCAGTTTTaGAAGATTATGAATAACATTACTATGAGCACGTCCGTGCACAGA +
Preference number: 2 (lower is better)
Translates to: LLYSLSEGNLGYFQF*KIMNNITMSTSVHR
Trigger: TCTGTGCACGGACGTGCTCATAGTAATGTTATTCATAATCTTCAAAAACTGGAAATAACCCAGATTTCCCTCACTGAGTGAATACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAGGGAAAACCCTTGTTTaGGTAAGAGGACTTACTATG +
Preference number: 2 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPGKTLV*VRGLTM
Trigger: CATAGTAAGTCCTCTTACTCAAACAAGGGTTTTCCC...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACTGGATGTTACTTATTaGACTCCAGGTACACATTAT +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSLDVTY*TPGTHY
Trigger: ATAATGTGTACCTGGAGTTCAATAAGTAACATCCAG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCATCAAGTAGATGTCATTaGCTACTAGAATTATGTGGG +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSSSRCH*LLELCG
Trigger: CCCACATAATTCTAGTAGCCAATGACATCTACTTGA...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAATAGTATGGAACCTTTaGAAACTGACTTCATTTTCC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSIVWNL*KLTSFS
Trigger: GGAAAATGAAGTCAGTTTCCAAAGGTTCCATACTAT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAGCTACTAGAATTATGTaGGAAAACCCTTGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPATRIM*ENPCLS
Trigger: ACTCAAACAAGGGTTTTCCCACATAATTCTAGTAGC...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCGTCACTTTCTACACTTaGGAGATCAAATCTGAAATC +
Preference number: 2 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPVTFYT*EIKSEI
Trigger: GATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGAC...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp TCCCAACCACCCTCCTGCGGATCCCCACGCCTCCCCTaGGCATCCCATGCGGGCAGCAGCACACAGGAGACC +
Preference number: 3 (lower is better)
Translates to: SQPPSCGSPRLP*ASHAGSSTQET
Trigger: GGTCTCCTGTGTGCTGCTGCCCGCATGGGATGCGCAGGGGAGGCGTGGGGATCCGCAGGAGGGTGGTTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp TCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTaGCCCCTGGCAGTGGTGTGCCCTCACCCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: SEHSFCLAWVRG*PLAVVCPHPAR
Trigger: CCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CAGTGGTGTGCCCTCACCCAGCAAGGGCCAGACAGCTaGTGTCTGGGAGAGGCACGACGGGGGCTCAGGAAC +
Preference number: 3 (lower is better)
Translates to: QWCALTQQGPDS*CLGEARRGLRN
Trigger: GTTCCTGAGCCCCCGTCGTGCCTCTCCCAGACAGCAGCTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp TGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGA +
Preference number: 3 (lower is better)
Translates to: WGRPGGLDAEEQ*ASSVRDLCTRG
Trigger: TCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTaGGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTG +
Preference number: 3 (lower is better)
Translates to: VQDLGPPRRTGR*GAVGVQCKRLV
Trigger: CACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp GCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAGAGGTGGGCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: AEEQWASSVRDL*TRGQQERWAGQ
Trigger: CTGGCCAGCCCACCTCTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CCACAGGCAGACTCACCAGGCACGCCCCATGGCCTGTaGTCATGCCCTCAGGTGGTGACGAAAGGTAGGGGA +
Preference number: 3 (lower is better)
Translates to: PQADSPGTPHGL*SCPQVVTKGRG
Trigger: TCCCCTACCTTTCGTCACCACCTGAGGGCATGAGCACAGGCCATGGGGCGTGCCTGGTGAGTCTGCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGACTGGGCCTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: LRVRPGTALVLS*PDAWCRLGLLL
Trigger: CAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GGGAAACCAGTCTCTGAGGAGTACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGTCCGTCCAGGCACTGC +
Preference number: 3 (lower is better)
Translates to: GKPVSEEYWVNC*YAGAPGPSRHC
Trigger: GCAGTGCCTGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CCTCCTGCAAATCCCAGGAGGGGAACTCGGAGCCAGTaGCCAGAACAGACAGCCAAGCCCCGGGTAGATCTC +
Preference number: 3 (lower is better)
Translates to: PPANPRRGTRSQ*PEQTAKPRVDL
Trigger: GAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTTCCCCTCCTGGGATTTGCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp CAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCG +
Preference number: 3 (lower is better)
Translates to: QPNLRVLGSHKS*PKQSLGLLPHP
Trigger: CGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GCTTCCTGCAGAAGCCCCTCCGGACTGCAGCACAGGTaGTCCCACCTGGTTGTAGGGCAGGTCACTCACTTC +
Preference number: 3 (lower is better)
Translates to: ASCRSPSGLQHR*SHLVVGQVTHF
Trigger: GAAGTGAGTGACCTGCCCTACAACCAGGTGGGACCACCTGTGCTGCAGTCCGGAGGGGCTTCTGCAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GCATCCATAGGTGGCTGCGCACCTAGACGGTCCTGCTaGAGGAAGGCAAGGCACACAGATCTCCAGCAGCCG +
Preference number: 3 (lower is better)
Translates to: ASIGGCAPRRSC*RKARHTDLQQP
Trigger: CGGCTGCTGGAGATCTGTGTGCCTTGCCTTCCTTCAGCAGGACCGTCTAGGTGCGCAGCCACCTATGGATGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GGCTCAGGAACACAGCCAGGAGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAAAAGGTGTCACGCTGC +
Preference number: 3 (lower is better)
Translates to: GSGTQPGGRGPF*VVSDNQKVSRC
Trigger: GCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTGTTCCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp GGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTaGTACACATGGCTTCACCCTTCGCCTGAACCCACT +
Preference number: 3 (lower is better)
Translates to: GPAPLQICTGRN*YTWLHPSPEPT
Trigger: AGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp ACAACCACGCCTTCCGGGCCAGCTCCTCTCCAGATCTaGACTGGCAGGAACTGCTACACATGGCTTCACCCT +
Preference number: 3 (lower is better)
Translates to: TTTPSGPAPLQI*TGRNCYTWLHP
Trigger: AGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCGGAAGGCGTGGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp CAGGAACACAGCCAGGAGGCCGTGGCCCCTTCTGAGTaGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: QEHSQEAVAPSE*SVTIKRCHAAG
Trigger: CCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGGCTCCGGGTCCGTCCA +
Preference number: 3 (lower is better)
Translates to: GLEGNQSLRSTG*TADMRGLRVRP
Trigger: TGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCTCTAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATATGCAGACAGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: VDQTPGADWAFF*HSPCVYADRSP
Trigger: TGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQCPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp ACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: TLNIICCLLSRT*GRPGGLDAEEQ
Trigger: CTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp CCAAAACGCAGAGGGTGCACATCGTTCTGCAGTGTCTaGGGTCACCTCACAGCCACCCTCTTTGTGACCACT +
Preference number: 3 (lower is better)
Translates to: PKRRGCTSFCSV*GHLTATLFVTT
Trigger: AGTGGTCACAAAGAGGGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGATGTGCACCCTCTGCGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGC +
Preference number: 3 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLIICCL*SRTWGR
Trigger: GCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: KTRVVCARDGFRGKPVSECPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGAAAAATCAGCAGGTTTaGGCCTTTGGTCTGTTTCTG +
Preference number: 3 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWKNQQV*AFGLFL
Trigger: CAGAAACAGACCAAAGGCCAAAACCTGCTGATTTTT...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp TGGCAGGAACTGCTACACATGGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGA +
Preference number: 3 (lower is better)
Translates to: WQELLHMASPFA*THFSASCPSFR
Trigger: TCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CAAGGACATCCAAAACGCAGAGGGTGCACATCGTTCTaGAGTGTCTGGGGTCACCTCACAGCCACCCTCTTT +
Preference number: 3 (lower is better)
Translates to: QGHPKRRGCTSF*SVWGHLTATLF
Trigger: AAAGAGGGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGATGTGCACCCTCTGCGTTTTGGATGTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp GAAGGAAGGCAAGGCACACAGATCTCCAGCAGCCGCTaGCCCAATTCCATCCACAGGGTTATTTCTAGGCTC +
Preference number: 3 (lower is better)
Translates to: EGRQGTQISSSR*PNSIHRVISRL
Trigger: GAGCCTAGAAATAACCCTGTGGATGGAATTGGGGCAGCGGCTGCTGGAGATCTGTGTGCCTTGCCTTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGC +
Preference number: 3 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSIICCL*SRTWGR
Trigger: GCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTG +
Preference number: 3 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWKGLKT*CSRLIL
Trigger: CAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTT...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp ACTTTCAGTGTAATCCTGAGTAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACAAATCATGGCCGAAGC +
Preference number: 3 (lower is better)
Translates to: TFSVILSRASPT*ESWAVTNHGRS
Trigger: GCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCTACTCAGGATTACACTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CCTACATTTACAAGGAGAAGAATGCAGGTTCAGTACTaGCCTCCTGCAAATCCCAGGAGGGGAACTCGGAGC +
Preference number: 3 (lower is better)
Translates to: PTFTRRRMQVQY*PPANPRRGTRS
Trigger: GCTCCGAGTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAAATGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp ATCCAGACCCACAGGAAGGTGACGTGCCACTCTCCTTaGGTAATCCCTAGGGTCATTTCGCTGCAACAACAT +
Preference number: 3 (lower is better)
Translates to: IQTHRKVTCHSP*VIPRVISLQQH
Trigger: ATGTTGTTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCTGTGGGTCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCATCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSSSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLRFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: TMGCFVALVPETPRSRWCCPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTSSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAATQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp AGAGTGAACAGTGCTGGCTGCCACTTCACTCGGTATTaGCTGGATAGTTTAGACTGTTGGGCTAGACCTGGC +
Preference number: 3 (lower is better)
Translates to: RVNSAGCHFTRY*LDSLDCWARPG
Trigger: GCCAGGTCTAGCCCAACAGTCTAAACTATCCAGTCAATACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CATCTGGGCCTTCAAGGCACTTCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACTTCACTCGGTATTGAC +
Preference number: 3 (lower is better)
Translates to: HLGLQGTSKDTE*TVLAATSLGID
Trigger: GTCAATACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGAAGTGCCTTGAAGGCCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: KTRVVCARDGFRGKPVSERFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSRFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CGACGTGCTCTAACTTCAGCATCCACGGTGTTTTTGTaGAGAGCACGTACGCAAGTAAATCCCATCAGCACC +
Preference number: 3 (lower is better)
Translates to: RRALTSASTVFL*RARTQVNPIST
Trigger: GGTGCTGATGGGATTTACTTGCGTACGTGCTCTTCACAAAAACACCGTGGATGCTGAAGTTAGAGCACGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CAGGTTTTACCTGGGCAGGACTATCCAGGTAGAATCTaGCAGTATGCACCTGACAGTATGGGACACCGTTCT +
Preference number: 3 (lower is better)
Translates to: QVLPGQDYPGRI*QYAPDSMGHRS
Trigger: AGAACGGTGTCCCATACTGTCAGGTGCATACTGTCAGATTCTACCTGGATAGTCCTGCCCAGGTAAAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp ATCAAATCTGAAATCCAGACCCACAGGAAGGTGACGTaGCACTCTCCTTGGGTAATCCCTAGGGTCATTTCG +
Preference number: 3 (lower is better)
Translates to: IKSEIQTHRKVT*HSPWVIPRVIS
Trigger: CGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCTGTGGGTCTGGATTTCAGATTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CCA 72 bp ATCCAGGTAGAATCTGACAGTATGCACCTGACAGTATaGGACACCGTTCTGACGGCTGACCACAGGTTTAAC +
Preference number: 3 (lower is better)
Translates to: IQVESDSMHLTV*DTVLTADHRFN
Trigger: GTTAAACCTGTGGTCAGCCGTCAGAACGGTGTCCCATACTGTCAGGTGCATACTGTCAGATTCTACCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp GACCCTCTAACATTGATGTCAAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCACGGTGTTTTTGTGAAG +
Preference number: 3 (lower is better)
Translates to: DPLTLMSSSVAT*SNFSIHGVFVK
Trigger: CTTCACAAAAACACCGTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCTTGACATCAATGTTAGAGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CTACTAAGGCAGGGTCTATCTAGTTCAACCCTTGCATaGACTAACACCTCCCCTCCCACATCAAGAAACAAC +
Preference number: 3 (lower is better)
Translates to: LLRQGLSSSTLA*TNTSPPTSRNN
Trigger: GTTGTTTCTTGATGTGGGAGGGGAGGTGTTAGTGCATGCAAGGGTTGAACTAGATAGACCCTGCCTTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GGCAACATTACCATGAACTGTCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAACAAAGATGAAAACACG +
Preference number: 3 (lower is better)
Translates to: GNITMNCPAHTS*GKPQVNKDENT
Trigger: CGTGTTTTCATCTTTGTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTAATGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp CCACCAAAACAACCAAAGCAGATGAAACATCACAGCTaGGCGGGGAGTAAGAGACCCTCTAACATTGATGTC +
Preference number: 3 (lower is better)
Translates to: PPKQPKQMKHHS*AGSKRPSNIDV
Trigger: GACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATGTTTCATCTGCTTTGGTTGTTTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAGCTGAGGCGGGTGGATaGCCTGAGCTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPAEAGG*PELRSS
Trigger: TGAACTCCTGAGCTCAGGCAATCCACCCGCCTCAGC...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp CTTAAGCACAGTTTCAGGCACGTGATTTCTTTAGCTTaGTGGAGAACATGGTGTCCCGGCGTGGAAACAGTA +
Preference number: 3 (lower is better)
Translates to: LKHSFRHVISLA*WRTWCPGVETV
Trigger: TACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAAGAAATCACGTGCCTGAAACTGTGCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp AGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTaGAATCCAGACCCACAGGAAGGTGACGTGCCACTC +
Preference number: 3 (lower is better)
Translates to: RACHFLHLRDQI*NPDPQEGDVPL
Trigger: GAGTGGCACGTCACCTTCCTGTGGGTCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp CTACAGGGCAATGGTGTGACTGACCAGCTCTTTCATTaGAGACATAGAAAGTACAAGCAGACCCTTCTGGCA +
Preference number: 3 (lower is better)
Translates to: LQGNGVTDQLFH*RHRKYKQTLLA
Trigger: TGCCAGAAGGGTCTGCTTGTACTTTCTATGTCTTCAATGAAAGAGCTGGTCAGTCACACCATTGCCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp GACAAAACAACTCCAACAACCCAAAGAATTCCCTCATaGTACCTCTTTCCAGTCAGACTTCCCCCACTCCCA +
Preference number: 3 (lower is better)
Translates to: DKTTPTTQRIPS*YLFPVRLPPLP
Trigger: TGGGAGTGGGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp GTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTaGACATCACGTCTTTTATACACATCAAGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: VALVPETPRSRW*TSRLLYTSSLL
Trigger: GAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GCTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTaGTTTGAGGGAATTCCGGGCACTACTTTGATTTTA +
Preference number: 3 (lower is better)
Translates to: AALQTVFLDEVG*FEGIPGTTLIL
Trigger: TAAAATCAAAGTAGTGCCCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GGCCAACAGATAAAGTCAGTAAGAGTGACACTAACCTaGTTAAGGAAGTGTGTGGTTTCTCAGAGCACACCC +
Preference number: 3 (lower is better)
Translates to: GQQIKSVRVTLT*LRKCVVSQSTP
Trigger: GGGTGTGCTCTGAGAAACCACACACTTCCTTAACCAGGTTAGTGTCACTCTTACTGACTTTATCTGTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCGTGTTCAAATTTGGTTaGGCCTTTGTTAGCACTGCT +
Preference number: 3 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPVFKFG*AFVSTA
Trigger: AGCAGTGCTAACAAAGGCCAAACCAAATTTGAACAC...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp ATGAGATACTATGGGTTGTTTTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTGGTGCACATCACGTCT +
Preference number: 3 (lower is better)
Translates to: MRYYGLFCCFSA*NTEIEVVHITS
Trigger: AGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGTATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGTQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTG +
Preference number: 3 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKKGLKT*CSRLIL
Trigger: CAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CCAAGGCTCTGGTTAACTAGGAATGCTTTGCTACATTaGAAGGAAAGTTCAAAACCAAGCCCAAACTCCCTG +
Preference number: 3 (lower is better)
Translates to: PRLWLTRNALLH*KESSKPSPNSL
Trigger: CAGGGAGTTTGGGCTTGGTTTTGAACTTTCCTTTCAATGTAGCAAAGCATTCCTAGTTAACCAGAGCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp TTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTaGTGCACATCACGTCTTTTATACACATCAAGCCTT +
Preference number: 3 (lower is better)
Translates to: FVALVPETPRSR*CTSRLLYTSSL
Trigger: AAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSATQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCACTGGATGTTACTTATaGAACTCCAGGTACACATTA +
Preference number: 3 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPTGCYL*NSRYTL
Trigger: TAATGTGTACCTGGAGTTCAATAAGTAACATCCAGT...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATGTGGGGAGAGTGACTaGTGGTCTGCTTACCCAAAA +
Preference number: 3 (lower is better)
Translates to: SNLVWPLLALLEQFCATECGESD*WSAYPK
Trigger: TTTTGGGTAAGCAGACCACAAGTCACTCTCCCCACA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp TACTCTCCTCATGAAGAGCATGTCACTTTCTACACTTaGGAGATCAAATCTGAAATCCAGACCCACAGGAAG +
Preference number: 3 (lower is better)
Translates to: YSPHEEHVTFYT*EIKSEIQTHRK
Trigger: CTTCCTGTGGGTCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAGGAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAGCACATGTCAACAGTTaGCTTCTTTTTATTGCTGAG +
Preference number: 3 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQAHVNS*LLFIAE
Trigger: CTCAGCAATAAAAAGAAGCAAACTGTTGACATGTGC...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAACATAGTATGGAACCTTaGGAAACTGACTTCATTTTC +
Preference number: 3 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQHSMEP*ETDFIF
Trigger: GAAAATGAAGTCAGTTTCCAAAGGTTCCATACTATG...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAAATTTGGTTTGGCCTTaGTTAGCACTGCTTGAGCAA +
Preference number: 3 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPNLVWP*LALLEQ
Trigger: TTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATT...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp TTCTATCTCAGGACTCCCAAATCGTTCAATTGGACTTaGACTCAGAAGGGAAACTGGATGTTACTTATTGAA +
Preference number: 3 (lower is better)
Translates to: FYLRTPKSFNWT*TQKGNWMLLIE
Trigger: TTCAATAAGTAACATCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGATAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCATCGTTCAATTGGACTaGAACTCAGAAGGGAAACTG +
Preference number: 3 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPIVQLD*NSEGKL
Trigger: CAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGAT...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp ATTAAACACCAAAAAGTAACTCTGCTACTCTCCTCATaGAGAGCATGTCACTTTCTACACTTGAGAGATCAA +
Preference number: 3 (lower is better)
Translates to: IKHQKVTLLLSS*RACHFLHLRDQ
Trigger: TTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAGGAGAGTAGCAGAGTTACTTTTTGGTGTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CCA 72 bp ATATGTATTTCCTTCCTCAAGTGTTCAAATTTGGTTTaGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCA +
Preference number: 3 (lower is better)
Translates to: ICISFLKCSNLV*PLLALLEQFCA
Trigger: TGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGAACACTTGAGGAAGGAAATACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp AGTGGTTATACATTTTGCATTCCTACAAGCAACATATaGTATGTTCTTCATCTTTGCCAGCACTTGGTATTC +
Preference number: 3 (lower is better)
Translates to: SGYTFCIPTSNI*YVLHLCQHLVF
Trigger: GAATACCAAGTGCTGGCAAAGATGAAGAACATATCATATGTTGCTTGTAGGAATGCAAAATGTATAACCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp ATTAAGGCCCATCACCAGGTTTATATAAGGCATGAGTaGCTTTTCAGAATGTCAAATATTCTGATCTCTAAA +
Preference number: 3 (lower is better)
Translates to: IKAHHQVYIRHE*LFRMSNILISK
Trigger: TTTAGAGATCAGAATATTTGACATTCTGAAAAGGCACTCATGCCTTATATAAACCTGGTGATGGGCCTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCACCTCCTCCTCGCGCTaGGCCAGGAGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSTSSSR*ARRASR
Trigger: GCGGGAGGCCCTCCTGGCCCAGCGCGAGGAGGAGGT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTCCCCACGCCTCCCCTaGGCATCCCATGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSSPRLP*ASHAGS
Trigger: GCTGCCCGCATGGGATGCGCAGGGGAGGCGTGGGGA...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCCAGGCCCCCAGCTGTaGCTCCGGAAGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRPGPQL*LRKGER
Trigger: TCTTTCTCCCTTCCGGAGGCACAGCTGGGGGCCTGG...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCTGGGCCTGCTGCTTCTaGAGGTTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRWACCF*RLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAGGCCCA...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGTCTGGCATTTCTGCTaGTGGCTCAGGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRVWHFC*WLRPLD
Trigger: GTCCAGGGGCCTGAGCCAGCAGCAGAAATGCCAGAC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCCCCCTGCGCATCCCATaGGGGCAGCAGCACACAGGA +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSPLRIP*GQQHTG
Trigger: TCCTGTGTGCTGCTGCCCGCATGGGATGCGCAGGGG...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCAGCTCCGCGGCCACCTaGCTTCTGCAACAGGAACCA +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRSSAAT*LLQQEP
Trigger: TGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCT...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGCAAGGCTCCCCGTaGCTTCCTCAGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRLQGSP*LPQEYC
Trigger: GCAGTACTCCTGAGGAAGCCACGGGGAGCCTTGCAG...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGCTCCTTTCCCTGCCTaGAGGCGGGGCTCGCATGAC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRAPFPA*RRGSHD
Trigger: GTCATGCGAGCCCCGCCTTCAGGCAGGGAAAGGAGC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCCTGGGTGCGAGGCTaGCCCCTGGCAGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAAWVRG*PLAVVC
Trigger: GCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGCTGGGAGAGGGGTGCTaGACTCAGCCATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWLGEGC*TQPCPG
Trigger: TCCGGGACATGGCTGAGTGCAGCACCCCTCTCCCAG...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGCCTCTGGGAGAGGGGTaGTGCACTCAGCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWPLGEG*CTQPCP
Trigger: GGGACATGGCTGAGTGCAGCACCCCTCTCCCAGAGG...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCCACCCTGCAGAGCGCTaGGGAGCTCGTAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGHPAER*GARRDE
Trigger: TTCATCTCTACGAGCTCCTCAGCGCTCTGCAGGGTG...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGGGGACAAGCTGCGAGTaGGCGCCCTCTCGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEGTSCE*APSRSA
Trigger: TGCTGAGCGAGAGGGCGCTCACTCGCAGCTTGTCCC...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCCTGTCTGCCGCTGGCTaGGCCGCTCTGCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFLSAAG*AALPPG
Trigger: GCCGGGAGGCAGAGCGGCTCAGCCAGCGGCAGACAG...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRRASPT*ESWAVT
Trigger: TGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSYWVNC*YAGAPG
Trigger: ACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTA...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTaGCCCCTGGCAGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLAWVRG*PLAVVC
Trigger: GCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGGCTTACTTGTGACGTaGACGTCAGAGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRGLLVT*TSEAPA
Trigger: AGCTGGAGCCTCTGACGTGCACGTCACAAGTAAGCC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCCAGGCCCCCAGCTGTaGCTCCGGAAGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRPGPQL*LRKGER
Trigger: TCTTTCTCCCTTCCGGAGGCACAGCTGGGGGCCTGG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCAGTCGGCCCAAGTGTaGCTCCCAGATTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRQSAQV*LPDFHS
Trigger: TGAGTGGAAATCTGGGAGGCACACTTGGGCCGACTG...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCCTGCGCTGCTTCTCCTaGTCAATGAGGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSLRCFS*SMRELG
Trigger: CCCGAGCTCCCTCATTGAGCAGGAGAAGCAGCGCAG...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGCATCCATAGGTGGCTaGGCACCTAGACGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSASIGG*APRRSC
Trigger: GCAGGACCGTCTAGGTGCGCAGCCACCTATGGATGC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGTCGCTGAGGGTCCGTaGGCTCCGGTGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLVAEGP*APVHRE
Trigger: TTCCCTGTGCACCGGAGCCCACGGACCCTCAGCGAC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGTGGATCTTGTGAGCTaGGTTGCCTTGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRVDLVS*VALLWC
Trigger: GCACCACAGCAAGGCAACCCAGCTCACAAGATCCAC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGGCCAGACTTGCTCCTaGTGGCACCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLGQTCS*WHQALG
Trigger: GCCCAGAGCCTGGTGCCACCAGGAGCAAGTCTGGCC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGACCAGGCACGCCCCATaGCCTGTGCTCATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQTRHAP*PVLMPS
Trigger: TGAGGGCATGAGCACAGGCCATGGGGCGTGCCTGGT...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGCCTGGTTGTGGATACTaGGAGCTCCGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEPGCGY*ELRGHL
Trigger: CAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGG...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGAAGAAGAAAGTCGCTaGGGGTCCGTGGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLREEESR*GSVGSG
Trigger: ACCGGAGCCCACGGACCCTCAGCGACTTTCTTCTTC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCATCGGGTGGATCTTGTaGGCTGGGTTGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGIGWIL*AGLPCC
Trigger: ACAGCAAGGCAACCCAGCTCACAAGATCCACCCGAT...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQASPFA*THFSAS
Trigger: GCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGGGGACTTTCAGTCTGTaGAACAGGGCTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQGTFSL*NRAPWA
Trigger: TGCCCAGGGAGCCCTGTTGCACAGACTGAAAGTCCC...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGAGCGGAGCTGTTGTaGTCTGCCCCCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRRAELL*SAPKAS
Trigger: GGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACCAGGCCCCCAGCTGTaGCTCCGGAAGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTPGPQL*LRKGER
Trigger: TCTTTCTCCCTTCCGGAGGCACAGCTGGGGGCCTGG...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTCCGCGGCCACCTaGCTTCTGCAACAGGAACCA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSSAAT*LLQQEP
Trigger: TGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGCCCCTTCCTGGTTGTaGATACTGAGAGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQAPSWL*ILRAPR
Trigger: CCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGCCTCCAGAGGAATACTaGGCTGTGCCTGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWPPEEY*AVPGSM
Trigger: CATGGAGCCAGGCACAGCCCAGTATTCCTCTGGAGG...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGTGGGGAGCAATCCTCTaGGAGAGGGGTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRWGAIL*ERGAAL
Trigger: GAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCA...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGCTCTGCCCTTCTaGTCCTTTGTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRLALPF*SFVCLA
Trigger: AGCCAGACAAACAAAGGACCAGAAGGGCAGAGCCAG...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQLLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACTGCAGCACAGGTaGTCCCACCTGGTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRGLQHR*SHLVVG
Trigger: CCCTACAACCAGGTGGGACCACCTGTGCTGCAGTCC...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp GCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: APGPSRHCPCAK*TRRLVQTGPSS
Trigger: AGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCCCAGATGGGGGTCCTaGCTGGTCAAGAAAACGGGT +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRPRWGS*LVKKTG
Trigger: ACCCGTTTTCTTGACCAGTCAGGACCCCCATCTGGG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGATGTGTCATGTGCCTaGAGGCTCCCTTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRDVSCA*RLPLGC
Trigger: GCAGCCCAAAGGGAGCCTTCAGGCACATGACACATC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGGTACAGCTGTGGTCTaGTCCCTCCAGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWGTAVV*SLQLPF
Trigger: AAAGGGAAGCTGGAGGGAGCAGACCACAGCTGTACC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCCTGGGCAGAGACCATaGAAGGTAGAGAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQPGQRP*KVEREC
Trigger: GCACTCCCTCTCTACCTTGCATGGTCTCTGCCCAGG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGCTTCCTCAGGAGTACTaGCCATTGGTAGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQLPQEY*PLVGSP
Trigger: GGGAGAGCCTACCAATGGGCAGTACTCCTGAGGAAG...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGGAAGCCAGAAGAGATaGTGCATCAGGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSGSQKR*CIRAWL
Trigger: GAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGCCTCCCGGCGCAGCTaGTCCTGTTCCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNASRRS*SCSLSS
Trigger: GCTTGAGAGGGAACAGGAGCAGCTGCGCCGGGAGGC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGTCTGCCTGGCCTGGGTaGGAGGCTGACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQSAWPG*EADPWQ
Trigger: CTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGA...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGGAACTCGGAGCCAGTaGCCAGAACAGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRGTRSQ*PEQTAK
Trigger: CTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTTCC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGAAGCCCCTCCGGACTaGAGCACAGGTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNEAPPD*STGGPT
Trigger: GGTGGGACCACCTGTGCTGCAGTCCGGAGGGGCTTC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGGGGTGAGTGCTTCCTaGAGAAGCCCCTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEGVSAS*RSPSGL
Trigger: CAGTCCGGAGGGGCTTCTGCAGGAAGCACTCACCCC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCTGGCCATCTGTCTCTaGGGCACTGGAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQLAICL*GTGRIL
Trigger: CAGGATCCTTCCAGTGCCCCAGAGACAGATGGCCAG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAGCTTCTGGGATTGCTaGAGGGGCGGGACCCTCATG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSFWDC*RGGTLM
Trigger: CATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCTGTGGGGAGCTCCTTaGCAACAGGCTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRLWGAP*QQAAVG
Trigger: TCCTACTGCAGCCTGTTGCCAAGGAGCTCCCCACAG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGACCCAACTCAGGGCTaGACAGTGACATGTGACAGG +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSDPTQG*TVTCDR
Trigger: CCTGTCACATGTCACTGTCCAGCCCTGAGTTGGGTC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCTTGTGGAAGGTACTGTaGAAGGGCCGTGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRLWKVL*KGRELS
Trigger: GGACAATTCACGGCCCTTCCACAGTACCTTCCACAA...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTGGGGAGCAATCCTCTaGGAGAGGGGTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLWGAIL*ERGAAL
Trigger: GAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCA...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTGCGAGGCTGACCCCTaGCAGTGGTGTGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLCEADP*QWCALT
Trigger: GGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp GGGCCTCCTTCCCCACCCGACACTCAATATCATCTGTaGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPPSPPDTQYHL*LIVQDLGPPRR
Trigger: CCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCCCAGATGGGGGTCCTaGCTGGTCAAGAAAACGGGT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPPRWGS*LVKKTG
Trigger: ACCCGTTTTCTTGACCAGTCAGGACCCCCATCTGGG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCCTGGTTGTGGATACTaGGAGCTCCGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNPGCGY*ELRGHL
Trigger: CAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGG...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTTCCCCATCCCGTGCTaGAGCTCTGCAGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAFPIPC*SSAAVE
Trigger: CTCCACTGCTGCAGAGCTTCAGCACGGGATGGGGAA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGACCTTGAGTCAGCAGTaGGACTTGTGGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRTLSQQ*DLWGHF
Trigger: GAAGTGGCCCCACAAGTCTCACTGCTGACTCAAGGT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAAAGGCGGGGCTCGCATaGCTTCCCTCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAKAGLA*LPSHQL
Trigger: CAGCTGGTGTGAGGGAAGTCATGCGAGCCCCGCCTT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAGCTCAATGGGGCTGCTaGCAGTCGGCCCAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQAQWGC*QSAQVC
Trigger: GCACACTTGGGCCGACTGTCAGCAGCCCCATTGAGC...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCGGCCACCTGGCTTCTaGAACAGGAACCACGTCAAC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLRPPGF*NRNHVN
Trigger: GTTGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCG...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCACGAAAGGCCTTCCGTaGCCTTTACTCCACAATCAG +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGTKGLP*PLLHNQ
Trigger: CTGATTGTGGAGTAAAGGGCACGGAAGGCCTTTCGT...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCTGGGAGAGGGGTGCTaGACTCAGCCATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNLGEGC*TQPCPG
Trigger: TCCGGGACATGGCTGAGTGCAGCACCCCTCTCCCAG...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACATCCTCCAAAGGTCTCTaGTCTCCGGGGCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTSSKGL*SPGQGN
Trigger: GTTTCCCTGCCCCGGAGAGCAGAGACCTTTGGAGGA...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTGCAGCACCACACCCTaGAGAGCGCTGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCCSTTP*RALRSS
Trigger: CGAGCTCCTCAGCGCTCTGCAGGGTGTGGTGCTGCA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGCCAGGTCCTGGCGCTaGTTCTCCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEARSWR*FSRLRC
Trigger: GCAGCGCAGCCTGGAGAAGCAGCGCCAGGACCTGGC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAACTCACGCTCGCGCCTaGGCTTCTCCTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASTHARA*ASPRGT
Trigger: AGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGT...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCGGTCATACTGGTATGTaGCCTTCTTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGGHTGM*PSSAGA
Trigger: AGCTCCAGCAGAAGAAGGGCACATACCAGTATGACC...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGATGCAGGTTCAGTACTaGCCTCCTGCAAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQMQVQY*PPANPR
Trigger: CCTGGGATTTGCAGGAGGGCAGTACTGAACCTGCAT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGCATGGCCTGTGCTCATaGCCTCAGGTGGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRHGLCS*PQVVTK
Trigger: TTTCGTCACCACCTGAGGGCATGAGCACAGGCCATG...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGTCGCTGAGGGTCCGTaGGCTCCGGTGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPVAEGP*APVHRE
Trigger: TTCCCTGTGCACCGGAGCCCACGGACCCTCAGCGAC...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGATACTGGGCTGTGCCTaGCTCCATGACCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQILGCA*LHDQVS
Trigger: AGAGACTTGGTCATGGAGCCAGGCACAGCCCAGTAT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGAAGGGCTTCATACACTaGCTACAGCTGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQKGFIH*LQLMGP
Trigger: GGGTCCCATCAGCTGTAGCCAGTGTATGAAGCCCTT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGTCCGCCATCATCCCCTaGCTGTACACACCACTCATG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSAIIP*LYTPLM
Trigger: CATGAGTGGTGTGTACAGCCAGGGGATGATGGCGGA...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGCCTGGCTGTCCTCTaGGCACAGCTGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQCLAVL*AQLGHH
Trigger: ATGGTGGCCCAGCTGTGCCCAGAGGACAGCCAGGCA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGTCACTCACTTCGGTaGCAGGGGACACAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAGHSLR*QGTQPV
Trigger: CACTGGCTGTGTCCCCTGCCACCGAAGTGAGTGACC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAAGGCCGGGGAAGGTGTaGGGGGTGAGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPRPGKV*GVSASC
Trigger: GCAGGAAGCACTCACCCCCCACACCTTCCCCGGCCT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGACACATCACTGCCATaGGAAGAATGTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSDTSLP*EECRSS
Trigger: ACTGGACCGACATTCTTCTCATGGCAGTGATGTGTC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIRASPT*ESWAVT
Trigger: TGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNYWVNC*YAGAPG
Trigger: ACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGAGGGAAACCAGTCTCTaGGGAGTACTGGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQRETSL*GVLGEL
Trigger: CAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCT...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCASPFA*THFSAS
Trigger: GCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCCTTTGATTAAAGAATaGGGCGGGGTGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLPLIKE*GGVGEG
Trigger: TCCCTCCCCCACCCCGCCTCATTCTTTAATCAAAGG...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCCTTTGATTAAAGAATaGGGCGGGGTGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPPLIKE*GGVGEG
Trigger: TCCCTCCCCCACCCCGCCTCATTCTTTAATCAAAGG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCCGCACAGCAAAATaGATCAATGTCTCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSRTAK*INVSRG
Trigger: CCCGCGAGAGACATTGATGCATTTTGCTGTGCGGCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGCCCCCAAGGCTTCCTaGCTTGACTCTGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNAPKAS*LDSVAR
Trigger: TCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAAGGTAGAGAGGGAGTaGTCCTTTCCCTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRKVERE*SFPCLK
Trigger: CTTCAGGCAGGGAAAGGAGCACTCCCTCTCTACCTT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGTCTGGCATTTCTGCTaGTGGCTCAGGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCVWHFC*WLRPLD
Trigger: GTCCAGGGGCCTGAGCCAGCAGCAGAAATGCCAGAC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCAGTCGGCCCAAGTGTaGCTCCCAGATTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLQSAQV*LPDFHS
Trigger: TGAGTGGAAATCTGGGAGGCACACTTGGGCCGACTG...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGGACCGACCACATCTTaGTCAATGGGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTGPTTS*SMGLLT
Trigger: TGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATGCAGCACCACACCCTaGAGAGCGCTGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPCSTTP*RALRSS
Trigger: CGAGCTCCTCAGCGCTCTGCAGGGTGTGGTGCTGCA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTGCAGCACCACACCCTaGAGAGCGCTGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLCSTTP*RALRSS
Trigger: CGAGCTCCTCAGCGCTCTGCAGGGTGTGGTGCTGCA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTCCTTTTCCAGGTCCTaGTGCCCCTGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLSFSRS*CPCCTS
Trigger: GGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGGGTGCACATCGTTCTaGAGTGTCTGGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASGCTSF*SVWGHL
Trigger: GAGGTGACCCCAGACACTGCAGAACGATGTGCACCC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTACGCCCCATGGCCTGTaGTCATGCCCTCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTTPHGL*SCPQVV
Trigger: CACCACCTGAGGGCATGAGCACAGGCCATGGGGCGT...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCGGGAAGGCCCTCTTTaGAAGCACAGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAREGPL*KHRAAP
Trigger: AGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCTGGCCATCTGTCTCTaGGGCACTGGAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDALAICL*GTGRIL
Trigger: CAGGATCCTTCCAGTGCCCCAGAGACAGATGGCCAG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGATCTTGTCCAGGAGGTaGTGTTCTCTGCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQILSRR*CSLLFL
Trigger: CAGGAAGAGCAGAGAACACCACCTCCTGGACAAGAT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGAGAGCTCCATGTCTGTaGGGAGCTCCTTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAERAPCL*GAPWQQ
Trigger: CTGTTGCCAAGGAGCTCCCCACAGACATGGAGCTCT...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTTCCCTCACACCAGCTaGGGCCCCATCATCATGGGC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNFPHTS*GPIIMG
Trigger: GCCCATGATGATGGGGCCCCAGCTGGTGTGAGGGAA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGCTGGCTCAGGCCCCTaGACAGGTAAAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQAGSGP*TGKMIF
Trigger: GAAGATCATTTTACCTGTCCAGGGGCCTGAGCCAGC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGTTCAGCTTTCACGTCTaGCATTTCTGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQFSFHV*HFCCWL
Trigger: GAGCCAGCAGCAGAAATGCCAGACGTGAAAGCTGAA...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTGCTGCATCAGGGCATaGCTCTATTGTACACCAGTT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGCCIRA*LYCTPV
Trigger: AACTGGTGTACAATAGAGCCATGCCCTGATGCAGCA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTCCTCCACGTCGCCTaGGTCAGCAGGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLLHVA*VSRLTL
Trigger: GAGAGTGAGCCTGCTGACCCAGGCGACGTGGAGGAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCATTCAGAATCTTTCTTaGAGGGGCTATGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRIQNLS*RGYVAG
Trigger: TCCTGCCACATAGCCCCTCCAAGAAAGATTCTGAAT...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTTGGCCAGGTCCTaGCGCTGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLRLARS*RCFSRL
Trigger: CAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAACCT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGACAGCCAGGAGGCCGTaGCCCCTTCTGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLTARRP*PLLSGQ
Trigger: CTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCTCCACCAAGTCCTGTaGGACTGGTATTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDALHQVL*DWYSPS
Trigger: GGATGGGGAATACCAGTCTCACAGGACTTGGTGGAG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAAGTACACCTTGTTTTaGGGTACACTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSKYTLF*GTLSAQ
Trigger: CTGGGCAGAGAGTGTACCTCAAAACAAGGTGTACTT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGAAGTACACCTTGTTTTaGGGTACACTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWKYTLF*GTLSAQ
Trigger: CTGGGCAGAGAGTGTACCTCAAAACAAGGTGTACTT...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGCATGTCATCACTGGGTaGGTGAAAGAGGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQHVITG*VKEVRI
Trigger: GATTCTGACCTCTTTCACTCACCCAGTGATGACATG...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCGTGTCATCGGTGGATaGACTGGATCCGGTGATATC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPRVIGG*TGSGDI
Trigger: GATATCACCGGATCCAGTTCATCCACCGATGACACG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGTGGGCTGCTTCATTTTaGCCTTTGCACAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQWAASF*PLHRRL
Trigger: TAGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCCA...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCTGTCTGCCGCTGGCTaGGCCGCTCTGCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLLSAAG*AALPPG
Trigger: GCCGGGAGGCAGAGCGGCTCAGCCAGCGGCAGACAG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATGTGGATGGGAAACCTaGCACAGGTCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQECGWET*HRSRSV
Trigger: GACAGAACGGGACCTGTGTCAGGTTTCCCATCCACA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAAGGAACAAATCCCCCTaGGGACAACTTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQERNKSP*GQLPRG
Trigger: CCCCCTTGGAAGTTGTCCTCAGGGGGATTTGTTCCT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGCACTGTCAAGGCCATaGGCAAAAGCACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLALSRP*AKAQAA
Trigger: GGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGCCTAGACGGTCCTGCTaGAGGAAGGCAAGGCACACA +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLPRRSC*RKARHT
Trigger: TGTGTGCCTTGCCTTCCTTCAGCAGGACCGTCTAGG...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCACGTCTGGCATTTCTaGTGCTGGCTCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHVWHF*CWLRPL
Trigger: CAGGGGCCTGAGCCAGCAGCAGAAATGCCAGACGTG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAGGCTCCCTTTGGGCTaGTTCATTTTGACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSRLPLG*FILTFA
Trigger: TGCAAAGGTCAAAATGAAGCAGCCCAAAGGGAGCCT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGAGAGCGAGACACTCTaGTGGGATCGTCTATTGGCA +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTESETL*WDRLLA
Trigger: TGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCAGCTTTTCTACCATCTaGTGCTCAAAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRSFSTI*CSKSRS
Trigger: GGATCTGCTTTTTGAGCAGCAGATGGTAGAAAAGCT...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTGGGAGAGGGGTGCTaGACTCAGCCATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILGEGC*TQPCPG
Trigger: TCCGGGACATGGCTGAGTGCAGCACCCCTCTCCCAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGCTGCTTCTCCAGGCTaGGCTGCTTCTCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAAASPG*AASPAQ
Trigger: TTGAGCAGGAGAAGCAGCGCAGCCTGGAGAAGCAGC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCTCGAGGTACTGGGCCTaGTGCTTCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFSRYWA*CFCRLA
Trigger: GGCCAACCTGCAGAAGCAGCAGGCCCAGTACCTCGA...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTTCCTTTTCCAGGTCCTaGTGCCCCTGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGISFSRS*CPCCTS
Trigger: GGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGA...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGTGTGTGTCCGAGAGATaGTGTTCCTTTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWCVSER*CSFLGT
Trigger: TGTCCCCAAAAAGGAACAGCATCTCTCGGACACACA...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGTTCCCCGTGTGTATATaGAGACAGGTCCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQFPVCI*RQVPMY
Trigger: GTACATGGGGACCTGTCTGCATATACACACGGGGAA...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGTGCACTGGCAGGAACTaGTACACATGGCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAECTGRN*YTWLHP
Trigger: AGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCA...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGACACAGAGTGAACAGTaGTGGCTGCCACTTCACTCG +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLTQSEQ*WLPLHS
Trigger: CGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGT...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTCAGTACTGCCCTCCTaGAAATCCCAGGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDASVLPS*KSQEGN
Trigger: GTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSSVAT*SNFSIH
Trigger: GTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGGGGTGAGTGCTTCCTaGAGAAGCCCCTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSGVSAS*RSPSGL
Trigger: CAGTCCGGAGGGGCTTCTGCAGGAAGCACTCACCCC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGATGGGGGTCCTGACTaGTCAAGAAAACGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRDGGPD*SRKRVK
Trigger: CTTTACCCGTTTTCTTGACCAGTCAGGACCCCCATC...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTGCAACAGGGCTCCCTaGGCAGCACTGAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRCNRAP*AALSAL
Trigger: GAGAGCACTCAGTGCTGCCCAGGGAGCCCTGTTGCA...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGAAGTGCTTTGTCCTTaGCACAGTCAGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWEVLCP*HSQLRL
Trigger: CAATCTCAGCTGACTGTGCCAAGGACAAAGCACTTC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGGCAGAGGTGCGTCCTaGGCAGAGACCATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFGRGAS*AETMQG
Trigger: ACCTTGCATGGTCTCTGCCCAGGACGCACCTCTGCC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGCATCCACTATACGGCTaGCAGCCTCCTCTATCAAGT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRHPLYG*QPPLSS
Trigger: ACTTGATAGAGGAGGCTGCCAGCCGTATAGTGGATG...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTATCGCCTGGGTCATTaGGCCTTGCTTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRYRLGH*ALLHLQ
Trigger: CTGAAGATGAAGCAAGGCCCAATGACCCAGGCGATA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGAAGTTCTCACATTCTaGGCTCTGCTTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQEVLTF*ALLGSQ
Trigger: CTGGCTTCCAAGCAGAGCCCAGAATGTGAGAACTTC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCCAAATGCTCTTCCTCTaGCTTTGGGAAGATGATGCT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGQMLFL*LWEDDA
Trigger: AGCATCATCTTCCCAAAGCCAGAGGAAGAGCATTTG...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGTATGGAGACACTTTTaGAGAGCGAGACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWVWRHF*RARHSA
Trigger: AGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATAC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTTCTCCTCGAGGTACTaGGCCTGCTGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLFSSRY*ACCFCR
Trigger: CCTGCAGAAGCAGCAGGCCCAGTACCTCGAGGAGAA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAACCTCCTCCTCGCGCTaGGCCAGGAGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTTSSSR*ARRASR
Trigger: GCGGGAGGCCCTCCTGGCCCAGCGCGAGGAGGAGGT...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGTGGCCCCTTCTGAGTaGTCAGTGACAATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQVAPSE*SVTIKR
Trigger: CCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGCACAGCTTCTGCCTaGCCTGGGTGCGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESTASA*PGCEAD
Trigger: GTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGATAGTTTAGACTGTTaGGCTAGACCTGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRDSLDC*ARPGSP
Trigger: GGGTGAGCCAGGTCTAGCCCAACAGTCTAAACTATC...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATCGTTCTGCAGTGTCTaGGGTCACCTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAASFCSV*GHLTAT
Trigger: GGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGTCACTCACTTCGGTaGCAGGGGACACAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTGHSLR*QGTQPV
Trigger: CACTGGCTGTGTCCCCTGCCACCGAAGTGAGTGACC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp CTTCCCCACCCGACACTCAATATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGAC +
Preference number: 4 (lower is better)
Translates to: LPHPTLNIICCL*SRTWGRPGGLD
Trigger: GTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGATGTCCAACTCTCGATaGTGCCTCACAGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRMSNSR*CLTEQS
Trigger: AGACTGTTCTGTGAGGCATCATCGAGAGTTGGACAT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGCAGTGTCTGGGGTACTaGCATTTGTTGTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQQCLGY*HLLLKC
Trigger: GCATTTCAACAACAAATGTCAGTACCCCAGACACTG...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAAGGCGGGGCTCGCATaGCTTCCCTCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCKAGLA*LPSHQL
Trigger: CAGCTGGTGTGAGGGAAGTCATGCGAGCCCCGCCTT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCACTGGACAGTGACATGTaGCAGGCCTCCCCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPLDSDM*QASPSV
Trigger: TACTGAGGGGGAGGCCTGTCACATGTCACTGTCCAG...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGATGAACTGGATCCGGTaGTATCACAGGCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRMNWIR*YHRPNA
Trigger: AGCATTTGGCCTGTGATATCACCGGATCCAGTTCAT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTACACTGGCTACAGCTaGTGGGACCCACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAYTGYS*WDPQQE
Trigger: TTCCTGTTGTGGGTCCCATCAGCTGTAGCCAGTGTA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCACCCTGCAGAGCGCTaGGGAGCTCGTAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHPAER*GARRDE
Trigger: TTCATCTCTACGAGCTCCTCAGCGCTCTGCAGGGTG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGGGACAAGCTGCGAGTaGGCGCCCTCTCGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAGTSCE*APSRSA
Trigger: TGCTGAGCGAGAGGGCGCTCACTCGCAGCTTGTCCC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGGGACAAGCTGCGAGTaGGCGCCCTCTCGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQGTSCE*APSRSA
Trigger: TGCTGAGCGAGAGGGCGCTCACTCGCAGCTTGTCCC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGCTGTCTGCCGCTGGCTaGGCCGCTCTGCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYELSAAG*AALPPG
Trigger: GCCGGGAGGCAGAGCGGCTCAGCCAGCGGCAGACAG...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRALVLS*PDAWCR
Trigger: TCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFALVLS*PDAWCR
Trigger: TCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLRSTG*TADMRG
Trigger: CCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGATGTGTCATGTGCCTaGAGGCTCCCTTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAADVSCA*RLPLGF
Trigger: GAAGCCCAAAGGGAGCCTTCAGGCACATGACACATC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGGGGAAAGCCTCAAGTaGACAAAGATGAAAACACGG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQGESLK*TKMKTR
Trigger: CCGTGTTTTCATCTTTGTTCACTTGAGGCTTTCCCC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGTGTCCAACCAGAACCTaGCCAAATCGTTTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRCPTRT*PNRFEW
Trigger: CCACTCAAAACGATTTGGTCAGGTTCTGGTTGGACA...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAAGAGTCCACAATAGGTaGTGGCTCCACCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQRVHNR*WLHLFP
Trigger: GGGGAAGAGGTGGAGCCAGCACCTATTGTGGACTCT...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACATTGCCTCACCTATaGCTGCTGCTAAGAGAGTAT +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQTLPHL*LLLREY
Trigger: ATACTCTCTTAGCAGCAGGCATAGGTGAGGCAATGT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTTGACATGCAGAGTCTaGACAAAGTTTATCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGLTCRV*TKFIVS
Trigger: GGAGACGATAAACTTTGTGCAGACTCTGCATGTCAA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCTTCCTCAGGAGTACTaGCCATTGGTAGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCLPQEY*PLVGSP
Trigger: GGGAGAGCCTACCAATGGGCAGTACTCCTGAGGAAG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTCACATTCTGGGCTCTaGTTGGAAGCCAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRSHSGL*LEARRD
Trigger: ATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGTGA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTGTGCTAGATCTTCCTaGTCCACTTCATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGCARSS*STSLSL
Trigger: CAAAGACAATGAAGTGGAGCAGGAAGATCTAGCACA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCTCGAGGTACTGGGCCTaGTGCTTCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSSRYWA*CFCRLA
Trigger: GGCCAACCTGCAGAAGCAGCAGGCCCAGTACCTCGA...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTTCCCCGTGTGTATATaGAGACAGGTCCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLFPVCI*RQVPMY
Trigger: GTACATGGGGACCTGTCTGCATATACACACGGGGAA...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCCGAGATCGAGGTGGTaGACATCACGTCTTTTATAC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRPRSRW*TSRLLY
Trigger: GTATAAAAGACGTGATGTGCACCACCTCGATCTCGG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGTTCTGTTGCTGCACTaGAGACTGTATTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRVLLLH*RLYSWM
Trigger: CATCCAGGAATACAGTCTGCAGTGCAGCAACAGAAC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAAGTTCAACCCTTGCATaGACTAACACCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASSSTLA*TNTSPP
Trigger: GGGAGGGGAGGTGTTAGTGCATGCAAGGGTTGAACT...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTATCTCCAGCAGCCGCTaGCCCAATTCCATCCACAGG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTISSSR*PNSIHR
Trigger: CCTGTGGATGGAATTGGGGCAGCGGCTGCTGGAGAT...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCATGGCCTGTGCTCATaGCCTCAGGTGGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNHGLCS*PQVVTK
Trigger: TTTCGTCACCACCTGAGGGCATGAGCACAGGCCATG...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGACGCCCCATGGCCTGTaGTCATGCCCTCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRTPHGL*SCPQVV
Trigger: CACCACCTGAGGGCATGAGCACAGGCCATGGGGCGT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGCACAGGGAAGAAACTaGCCATCTGTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAAQGRN*PSVSGA
Trigger: TGCCCCAGAGACAGATGGCCAGTTTCTTCCCTGTGC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCACCTCCAGAGGAATACTaGGCTGTGCCTGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPPPEEY*AVPGSM
Trigger: CATGGAGCCAGGCACAGCCCAGTATTCCTCTGGAGG...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAAATCCGCACGTTCCTaGGTATCCCTTACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPKSARS*VSLTGS
Trigger: TGACCCTGTAAGGGATACCCAGGAACGTGCGGATTT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGCTTCTGGGATTGCTaGAGGGGCGGGACCCTCATG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESFWDC*RGGTLM
Trigger: CATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGAAGTGCTTTGTCCTTaGCACAGTCAGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLREVLCP*HSQLRL
Trigger: CAATCTCAGCTGACTGTGCCAAGGACAAAGCACTTC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCCCATCAGACCCATCTaGCAACAGACATGGCAACAG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAPIRPI*QQTWQQ
Trigger: CTGTTGCCATGTCTGTTGCCAGATGGGTCTGATGGG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCACGGCATTCTTCTCTTaGCTCAACAAGACGTTTGGA +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSTAFFS*LNKTFG
Trigger: TCCAAACGTCTTGTTGAGCCAAGAGAAGAATGCCGT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCCATGGTACAGCTGTaGTCTGCTCCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIPMVQL*SAPSSF
Trigger: GAAGCTGGAGGGAGCAGACCACAGCTGTACCATGGG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTAGAGCTCCATGTCTGTaGGGAGCTCCTTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCRAPCL*GAPWQQ
Trigger: CTGTTGCCAAGGAGCTCCCCACAGACATGGAGCTCT...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTCTCGGTTTATCGCCTaGGTCATTGGGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDASRFIA*VIGPCF
Trigger: GAAGCAAGGCCCAATGACCCAGGCGATAAACCGAGA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGTCTCGGCAGCCTTTGTaGACAAAAGCACTGCAATTT +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQSRQPL*TKALQF
Trigger: AAATTGCAGTGCTTTTGTCCACAAAGGCTGCCGAGA...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGACCGAGGACGCTCCTTaGGCTGTGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQTEDAP*AVRACF
Trigger: GAAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGT...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTCCGCCATCATCCCCTaGCTGTACACACCACTCATG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCSAIIP*LYTPLM
Trigger: CATGAGTGGTGTGTACAGCCAGGGGATGATGGCGGA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGTCTTTGGAGCTGGCATaGACTTCTACCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSLELA*TSTISG
Trigger: TCCAGAGATGGTAGAAGTCCATGCCAGCTCCAAAGA...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTGGGGAGCAATCCTCTaGGAGAGGGGTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEWGAIL*ERGAAL
Trigger: GAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTTTCTCCTCGAGGTACTaGGCCTGCTGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIFSSRY*ACCFCR
Trigger: CCTGCAGAAGCAGCAGGCCCAGTACCTCGAGGAGAA...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGTTCTCCTCGAGGTACTaGGCCTGCTGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQFSSRY*ACCFCR
Trigger: CCTGCAGAAGCAGCAGGCCCAGTACCTCGAGGAGAA...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCCGTTCTGTCTGCCGCTaGCTGAGCCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEARSVCR*LSRSAS
Trigger: GGAGGCAGAGCGGCTCAGCCAGCGGCAGACAGAACG...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAACCCTGATTTGGCTATaGAAGGTGCAGATGGCGAGG +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQETLIWL*KVQMAR
Trigger: CCTCGCCATCTGCACCTTCCATAGCCAAATCAGGGT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCTGGATGAAGTTGGGTaGTTTGAGGGAATTCCGGGC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDALDEVG*FEGIPG
Trigger: GCCCGGAATTCCCTCAAACCACCCAACTTCATCCAG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGATCCTTGGGAAGACCTaGCTACAGAAAAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRILGKT*LQKKSP
Trigger: AGGGCTCTTTTTCTGTAGCCAGGTCTTCCCAAGGAT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp AGTTCAAAACCAAGCCCAAACTCCCTGCCCTCTTCTTaGTCTCTGAGGATGGACGAGAGCGACGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSKPSPNSLPSS*SLRMDESDGAG
Trigger: GCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGACAAAGAAGAGGGCAGGGAGTTTGGGCTTGGTTTTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTGCAGCTTCAGGTGCCTaGATGCCAGCACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIAASGA*MPAPTS
Trigger: AGAAGTTGGTGCTGGCATTCAGGCACCTGAAGCTGC...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCTCCTCAACTATGCTTaGCAAATCACAGGGACTTTC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQLLNYA*QITGTF
Trigger: GAAAGTCCCTGTGATTTGTCAAGCATAGTTGAGGAG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTCCAGAGGAGAAGGCTaGCTGCAGTTAAGAGCATCG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCSRGEG*LQLRAS
Trigger: CGATGCTCTTAACTGCAGTCAGCCTTCTCCTCTGGA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTGGACAGTGACATGTaGCAGGCCTCCCCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILDSDM*QASPSV
Trigger: TACTGAGGGGGAGGCCTGTCACATGTCACTGTCCAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTATGAACTGGATCCGGTaGTATCACAGGCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPMNWIR*YHRPNA
Trigger: AGCATTTGGCCTGTGATATCACCGGATCCAGTTCAT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGAGAATGTCGGTCCAGTaGAGCCGTGTCATCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQRMSVQ*SRVIGG
Trigger: TCCACCGATGACACGGCTTCACTGGACCGACATTCT...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGATGTGTCATGTGCCTaGAGGCTCCCTTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSDVSCA*RLPLGC
Trigger: GCAGCCCAAAGGGAGCCTTCAGGCACATGACACATC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTTCTCACCTGAAAACTaGTTTACAAGCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSFSPEN*FTSTSP
Trigger: AGGGGATGTGCTTGTAAATCAGTTTTCAGGTGAGAA...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCCTTGGCAAACATCTaGCCACTCTTCATCCTCATG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSLANI*PLFILM
Trigger: CATGAGGATGAAGAGTGGTCAGATGTTTGCCAAGGA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTTAAAGGTCCTCCTTTaGGAGCCTCTTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPLKVLL*EPLLCW
Trigger: CCAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCCACTTCACTCGGTATTaGCTGGATAGTTTAGACTGT +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSHFTRY*LDSLDC
Trigger: ACAGTCTAAACTATCCAGTCAATACCGAGTGAAGTG...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTAACAACCAAAGCAGATaGAACATCACAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDANNQSR*NITAGR
Trigger: CCGCCCAGCTGTGATGTTTCATCTGCTTTGGTTGTT...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGGAACAAATCCCCCTaGGGACAACTTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRRNKSP*GQLPRG
Trigger: CCCCCTTGGAAGTTGTCCTCAGGGGGATTTGTTCCT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGTTGGAAGCACAGAGCTaGACCTTCACTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQLEAQS*TFTVSQ
Trigger: TTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAA...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCTTCAGGTGCCTGAATaGCAGCACCAACTTCTTATC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPLQVPE*QHQLLI
Trigger: GATAAGAAGTTGGTGCTGGCATTCAGGCACCTGAAG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGCACAGCATCTCCACTaGTCAGGGACTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIAQHLH*SGTPGL
Trigger: CAGACCAGGAGTCCCTGAGCAGTGGAGATGCTGTGC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCGTTATCACACAGTTTTaGAACCAAATCGCCACTAGA +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGVITQF*NQIATR
Trigger: TCTAGTGGCGATTTGGTTGCAAAACTGTGTGATAAC...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAGAGCGGAGCTGTTGTaGTCTGCCCCCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCRAELL*SAPKAS
Trigger: GGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTCCTTGGCAACAGGCTaGAGTAGGACAGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNSLATG*SRTGCA
Trigger: AGCACATCCTGTCCTACTGCAGCCTGTTGCCAAGGA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTGGGTCATTGGGCCTTaGTTCATCTTCAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPWVIGP*FIFSVA
Trigger: TGCTACACTGAAGATGAAGCAAGGCCCAATGACCCA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGAGAGCGAGACACTCTaGTGGGATCGTCTATTGGCA +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAESETL*WDRLLA
Trigger: TGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGTCAGTGAGAAGAACTaGTTGAACCTCTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWVSEKN*LNLFQP
Trigger: AGGTTGAAAGAGGTTCAAGCAGTTCTTCTCACTGAC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCTGCGCTGCTTCTCCTaGTCAATGAGGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVLRCFS*SMRELG
Trigger: CCCGAGCTCCCTCATTGAGCAGGAGAAGCAGCGCAG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGCCAGGTCCTGGCGCTaGTTCTCCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLARSWR*FSRLRC
Trigger: GCAGCGCAGCCTGGAGAAGCAGCGCCAGGACCTGGC...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAGGTACTGGGCCTGCTaGTTCTGCAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCRYWAC*FCRLAR
Trigger: CCTGGCCAACCTGCAGAAGCAGCAGGCCCAGTACCT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCGCCTCCCGGCGCAGCTaGTCCTGTTCCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCASRRS*SCSLSS
Trigger: GCTTGAGAGGGAACAGGAGCAGCTGCGCCGGGAGGC...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGCCGAGATCGAGGTGGTaGACATCACGTCTTTTATAC +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEPRSRW*TSRLLY
Trigger: GTATAAAAGACGTGATGTGCACCACCTCGATCTCGG...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTCTGCCTGGCCTGGGTaGGAGGCTGACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGSAWPG*EADPWQ
Trigger: CTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTGCACTGGCAGGAACTaGTACACATGGCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNCTGRN*YTWLHP
Trigger: AGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTCTGCAAGGCCAGCTTaGAATTCATCAATAAGCACC +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRSARPA*NSSIST
Trigger: GGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCGGGAAGGCCCTCTTTaGAAGCACAGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEREGPL*KHRAAP
Trigger: AGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGTCTCTGGGGCACTaGAAGGATCCTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLSLGH*KDPVLS
Trigger: TGACAGCACAGGATCCTTCCAGTGCCCCAGAGACAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGCACAGGGAAGAAACTaGCCATCTGTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPAQGRN*PSVSGA
Trigger: TGCCCCAGAGACAGATGGCCAGTTTCTTCCCTGTGC...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGGACTCCTGGTCTGTaGGCATTCCAGAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAGTPGL*AFQKIL
Trigger: CAAAATCTTCTGGAATGCCCACAGACCAGGAGTCCC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGAAAGTGCGTCATCCTTaGTTACTGATTCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRKVRHP*LLIHCL
Trigger: CAGGCAGTGAATCAGTAACCAAGGATGACGCACTTT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTCTCGGTTTATCGCCTaGGTCATTGGGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNSRFIA*VIGPCF
Trigger: GAAGCAAGGCCCAATGACCCAGGCGATAAACCGAGA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCAAATGCTCTTCCTCTaGCTTTGGGAAGATGATGCT +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQQMLFL*LWEDDA
Trigger: AGCATCATCTTCCCAAAGCCAGAGGAAGAGCATTTG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAGAGAAAGAGAGCGCATaGAGCTCCTTAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQEKESA*SSLGQS
Trigger: GCTCTGTCCTAAGGAGCTCCATGCGCTCTCTTTCTC...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGAGAAAGAGAGCGCATaGAGCTCCTTAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCEKESA*SSLGQS
Trigger: GCTCTGTCCTAAGGAGCTCCATGCGCTCTCTTTCTC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGATTCAGAATCTTTCTTaGAGGGGCTATGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRIQNLS*RGYVAG
Trigger: TCCTGCCACATAGCCCCTCCAAGAAAGATTCTGAAT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGAGCGAGACACTCTGCTaGGATCGTCTATTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAESETLC*DRLLAN
Trigger: ATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCT...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCAAGCAATATGCACTCTaGAATTCCAAGCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGKQYAL*NSKPSN
Trigger: GTTAGAAGGCTTGGAATTCCAGAGTGCATATTGCTT...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGGACTTCTACCATCTCTaGATCTGTCATCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEDFYHL*ICHPHA
Trigger: AGCATGGGGATGACAGATCCAGAGATGGTAGAAGTC...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGGTTCCTCTTTGGAGCTaGCATGGACTTCTACCATCT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEVPLWS*HGLLPS
Trigger: AGATGGTAGAAGTCCATGCCAGCTCCAAAGAGGAAC...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATCTAGGGCTATGTGTTaGGGAGCAATCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAASRAMC*GAILWE
Trigger: CTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGTTCTCCTAAGATCTTaGCCATCATCTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTVLLRS*PSSPSS
Trigger: GGAAGAGGGAGATGATGGCCAAGATCTTAGGAGAAC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGACCTCCTCCTCGCGCTaGGCCAGGAGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQTSSSR*ARRASR
Trigger: GCGGGAGGCCCTCCTGGCCCAGCGCGAGGAGGAGGT...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGGATCCTCATCAGCTTaGTATGTGGATGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLGSSSA*YVDGKP
Trigger: AGGTTTCCCATCCACATACCAAGCTGATGAGGATCC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEDWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAACAGAGTGAACAGTGCTaGCTGCCACTTCACTCGGTA +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQQSEQC*LPLHSV
Trigger: TACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTG...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCCAAATCGTTTTGAGTaGGGTCTGGGCAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPPNRFE*GLGRCE
Trigger: TTCACATCTGCCCAGACCCCACTCAAAACGATTTGG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCGAGAGCGACGGGGCTaGCTGGGACGCATCCATAGG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWRERRG*LGRIHR
Trigger: CCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACGAGAGCGACGGGGCTaGCTGGGACGCATCCATAGG +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTRERRG*LGRIHR
Trigger: CCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp CGTACGCAAGTAAATCCCATCAGCACCAACCTCGTATaGTTCCAAACCCGGAGAACAGGGGCACCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: RTQVNPISTNLV*FQTRRTGAPGL
Trigger: TAGGCCGGGTGCCCCTGTTCTCCGGGTTTGGAACAATACGAGGTTGGTGCTGATGGGATTTACTTGCGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGCGAGTACTTGTACAGTaGCGGAGGGTGGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRRVLVQ*RRVEPK
Trigger: TTTGGGTTCCACCCTCCGTCACTGTACAAGTACTCG...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTTTCACAACAATCATaGCCAGGAGCAATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAVSQQS*PGAMVS
Trigger: GGAGACCATTGCTCCTGGTCATGATTGTTGTGAAAC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTGCATCATGCAAACTCTaGTCTGTCCCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPASCKL*SVPNTF
Trigger: GAATGTATTGGGGACAGATCAGAGTTTGCATGATGC...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTCTGTGCCTGGCTCCATaGCCAAGTCTCTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLCLAP*PSLSEA
Trigger: TGCTTCAGAGAGACTTGGTCATGGAGCCAGGCACAG...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTTACAGGGTCAGAGGTaGCTGTATGAGCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLLQGQR*LYEPVG
Trigger: ACCCACAGGCTCATACAGTCACCTCTGACCCTGTAA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTCCACCAAGTCCTGTaGGACTGGTATTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILHQVL*DWYSPS
Trigger: GGATGGGGAATACCAGTCTCACAGGACTTGGTGGAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTTGCAGGCACTTCAGTaGTACTGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLLQALQ*YCPSPP
Trigger: AGGAGGAGATGGACAGTATCACTGAAGTGCCTGCAA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACCAATCCAGGATGGCTaGTTGTCATTAATGAGATGG +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTPIQDG*LSLMRW
Trigger: CCATCTCATTAATGACAATCAGCCATCCTGGATTGG...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTACACTGGCTACAGCTaGTGGGACCCACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLYTGYS*WDPQQE
Trigger: TTCCTGTTGTGGGTCCCATCAGCTGTAGCCAGTGTA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTACTTGGTAATCCGCTaGGTTACAAGCAATATGCAC +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRYLVIR*VTSNMH
Trigger: GTGCATATTGCTTGTAACTCAGCGGATTACCAAGTA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTGTGAGAAGAACTGCTTaGACCTCTTTCAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPVRRTA*TSFNLP
Trigger: AGGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCAC...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCCACTCACCAAACCCTaGAGGATCTCCACCTCATTT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCPLTKP*RISTSF
Trigger: AAATGAGGTGGAGATCCTTCAGGGTTTGGTGAGTGG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAATACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQYWVNC*YAGAPG
Trigger: ACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTA...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWLRSTG*TADMRG
Trigger: CCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACTTTGGGCTTCATTTTaGCCTTTGCACAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASLWASF*PLHRRL
Trigger: TAGCCTCCTGTGCAAAGGTCAAAATGAAGCCCAAAG...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR TCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGCCTTTGGTCTGTTTCTaGAGGGTGAGTATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEPLVCF*RVSILH
Trigger: ATGGAGAATACTCACCCTTCAGAAACAGACCAAAGG...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCATCCACGGTGTTTTTGTaGAGAGCACGTACGCAAGTA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASSTVFL*RARTQV
Trigger: TACTTGCGTACGTGCTCTTCACAAAAACACCGTGGA...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCTCTTTGTGACCACTTaGAGCCCATTCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCLFVTT*SPFTRT
Trigger: AGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACTGAAACTTCTCCTATaGATGGGAGGTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASLKLLL*MGGLLT
Trigger: TGTCAGGAGACCTCCCATTCATAGGAGAAGTTTCAG...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGTTGGAAGCACAGAGCTaGACCTTCACTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAELEAQS*TFTVSQ
Trigger: TTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAA...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCGGCCACCTGGCTTCTaGAACAGGAACCACGTCAAC +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWRPPGF*NRNHVN
Trigger: GTTGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCGTCCGTGGGCTCCGGTaGACAGGGAAGAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCVRGLR*TGKKLA
Trigger: GGCCAGTTTCTTCCCTGTGCACCGGAGCCCACGGAC...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGCACAGCATCTCCACTaGTCAGGGACTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWAQHLH*SGTPGL
Trigger: CAGACCAGGAGTCCCTGAGCAGTGGAGATGCTGTGC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGCTTACTTGTGACGTaGACGTCAGAGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSGLLVT*TSEAPA
Trigger: AGCTGGAGCCTCTGACGTGCACGTCACAAGTAAGCC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGGTTATCACACAGTTTTaGAACCAAATCGCCACTAGA +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQVITQF*NQIATR
Trigger: TCTAGTGGCGATTTGGTTGCAAAACTGTGTGATAAC...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATCTTGTGAGCTGGGTTaGCTTGCTGTGGTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPSCELG*LAVVLS
Trigger: CGAAAGCACCACAGCAAGGCAACCCAGCTCACAAGA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGGGGCGGGACCCTCATaGTCTCCACCAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTGAGPS*SPPSPV
Trigger: CACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGGGGCGGGACCCTCATaGTCTCCACCAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWGAGPS*SPPSPV
Trigger: CACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCC...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTCCAGCAAAACATCCTaGAAGGCTCCCCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESSKTS*KAPRGF
Trigger: GAAGCCACGGGGAGCCTTGCAGGATGTTTTGCTGGA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGGAAGCCAGAAGAGATaGTGCATCAGGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSGSQKR*CIRAWL
Trigger: GAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGAATCCATCAAGGCTTTaGCGATCTCTTGACCTGTTT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRNPSRL*RSLDLF
Trigger: AAACAGGTCAAGAGATCGGCAAAGCCTTGATGGATT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGAGAGCGAGACACTCTaGTGGGATCGTCTATTGGCA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLESETL*WDRLLA
Trigger: TGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTC...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGGACCGACCACATCTTaGTCAATGGGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSGPTTS*SMGLLT
Trigger: TGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGTCCTCCAAAGGTCTCTaGTCTCCGGGGCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRSSKGL*SPGQGN
Trigger: GTTTCCCTGCCCCGGAGAGCAGAGACCTTTGGAGGA...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACATCGAGGTACTGGGCCTaGTGCTTCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTSRYWA*CFCRLA
Trigger: GGCCAACCTGCAGAAGCAGCAGGCCCAGTACCTCGA...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCATGCAGGTTCAGTACTaGCCTCCTGCAAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFMQVQY*PPANPR
Trigger: CCTGGGATTTGCAGGAGGGCAGTACTGAACCTGCAT...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATCCCCACGCCTCCCCTaGGCATCCCATGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTSPRLP*ASHAGS
Trigger: GCTGCCCGCATGGGATGCGCAGGGGAGGCGTGGGGA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAAAGTGCGTCATCCTTaGTTACTGATTCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPKVRHP*LLIHCL
Trigger: CAGGCAGTGAATCAGTAACCAAGGATGACGCACTTT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTGGCCAGACTTGCTCCTaGTGGCACCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGGQTCS*WHQALG
Trigger: GCCCAGAGCCTGGTGCCACCAGGAGCAAGTCTGGCC...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGGAATCAGGATGTCTTaGGTGTTGTGTGATATATTC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSGIRMS*VLCDIF
Trigger: GAATATATCACACAACACCCAAGACATCCTGATTCC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGCTTCATCGTCTATTTaGGCTTCCTCAGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLASSSI*ASSASP
Trigger: GGGTGACGCTGAGGAAGCCCAAATAGACGATGAAGC...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATATCGCCTGGGTCATTaGGCCTTGCTTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQYRLGH*ALLHLQ
Trigger: CTGAAGATGAAGCAAGGCCCAATGACCCAGGCGATA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAACTCTTCCTCTGGCTTTaGGAAGATGATGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQELFLWL*EDDAVH
Trigger: ATGGACAGCATCATCTTCCCAAAGCCAGAGGAAGAG...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATTCCTCACCACTGAATaGGTGTCTGAGCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPFLTTE*VSELFG
Trigger: GCCGAAGAGCTCAGACACCCATTCAGTGGTGAGGAA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGATCCTATGTTCTCTCTaGTCTGACTCCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEILCSL*SDSRSS
Trigger: AGAGGATCTGGAGTCAGACCAGAGAGAACATAGGAT...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCTGCTTCCAGCTGTTTaGACTCAATCTCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLLLPAV*TQSQSL
Trigger: GAGACTTTGAGATTGAGTCCAAACAGCTGGAAGCAG...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCATCACTGTTGACTTCTaGTCCAATGATGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSITVDF*SNDAKM
Trigger: CATCTTTGCATCATTGGACCAGAAGTCAACAGTGAT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTTAATTCTCGGGCTCTaGTGTCCAACATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGLILGL*CPTFSF
Trigger: AAAAGAAAATGTTGGACACCAGAGCCCGAGAATTAA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTCGTTCTGTCTGCCGCTaGCTGAGCCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCRSVCR*LSRSAS
Trigger: GGAGGCAGAGCGGCTCAGCCAGCGGCAGACAGAACG...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCGTTCTGTCTGCCGCTaGCTGAGCCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFRSVCR*LSRSAS
Trigger: GGAGGCAGAGCGGCTCAGCCAGCGGCAGACAGAACG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATACTGGGGAAGAACGATaGGATCCTCATCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNTGEER*DPHQLG
Trigger: ACCAAGCTGATGAGGATCCCATCGTTCTTCCCCAGT...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTGGTCCTTTGTTTGTCTaGCTGGTTGAACTCAGTATG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPGPLFV*LVELSM
Trigger: CATACTGAGTTCAACCAGCCAGACAAACAAAGGACC...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGGCTCTGCCCTTCTaGTCCTTTGTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLALPF*SFVCLA
Trigger: AGCCAGACAAACAAAGGACCAGAAGGGCAGAGCCAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAACACCGAGATCGAGGTaGTGCACATCACGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASTPRSR*CTSRLL
Trigger: TAAAAGACGTGATGTGCACCACCTCGATCTCGGTGT...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGTTTTGAGTGGGGTCTaGGCAGATGTGAAATCTCTA +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLVLSGV*ADVKSL
Trigger: TAGAGATTTCACATCTGCCCAGACCCCACTCAAAAC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGTGGACAGCAACTTCTaGATCAAGTTCTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASVDSNF*IKFWPL
Trigger: TAGAGGCCAGAACTTGATCCAGAAGTTGCTGTCCAC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTGCCTGGCTGTCCTCTaGGCACAGCTGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWCLAVL*AQLGHH
Trigger: ATGGTGGCCCAGCTGTGCCCAGAGGACAGCCAGGCA...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGAAGTTCAAAGCCTGCTaGTTTCCAGCACTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLKFKAC*FPALVA
Trigger: AGCAACCAGTGCTGGAAATCAGCAGGCTTTGAACTT...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGATGACCAAGTCTCTCTaGAGCACAGCATCTCCACTG +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRMTKSL*STASPL
Trigger: CAGTGGAGATGCTGTGCTTCAGAGAGACTTGGTCAT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAGTACTTTCCCCTCCCTaGAGCACATTCTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQVLSPP*STFFQT
Trigger: TGTTTGGAAGAATGTGCTTCAGGGAGGGGAAAGTAC...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATGTAGAACAAATGGGTaGGGATTTGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQECRTNG*GFALLA
Trigger: AGCCAAAAGGGCAAATCCTCACCCATTTGTTCTACA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACACAAGGCTTCCTGCCTTaGCTCTGTGGCCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTQGFLP*LCGQTC
Trigger: GCAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTG...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCTCAGGGCTGGACAGTaGCATGTGACAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLLRAGQ*HVTGLP
Trigger: GGGGAGGCCTGTCACATGTCACTGTCCAGCCCTGAG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTCATCACTGGGTGAGTaGAAGAGGTCAGAATCACTC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLSSLGE*KRSESL
Trigger: GAGTGATTCTGACCTCTTTCACTCACCCAGTGATGA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAATGAACTGGATCCGGTaGTATCACAGGCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAMNWIR*YHRPNA
Trigger: AGCATTTGGCCTGTGATATCACCGGATCCAGTTCAT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGAGAATGTCGGTCCAGTaGAGCCGTGTCATCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRRMSVQ*SRVIGG
Trigger: TCCACCGATGACACGGCTTCACTGGACCGACATTCT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGCATCTTTGTTGGTaGAGGGCTTCATACACTGGC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLRHLCW*RASYTG
Trigger: GCCAGTGTATGAAGCCCTTCACCAACAAAGATGCCT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTTGGGCTGCTTCATTTTaGCCTTTGCACAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIWAASF*PLHRRL
Trigger: TAGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCCA...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACATACTTGGTAATCCGCTaGGTTACAAGCAATATGCAC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTYLVIR*VTSNMH
Trigger: GTGCATATTGCTTGTAACTCAGCGGATTACCAAGTA...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGTGAGAAGAACTGCTTaGACCTCTTTCAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEVRRTA*TSFNLP
Trigger: AGGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCAC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTTAAAGGTCCTCCTTTaGGAGCCTCTTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCLKVLL*EPLLCW
Trigger: CCAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGTTTGTCTGGCTGGTTaGACTCAGTATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASVCLAG*TQYVKR
Trigger: CCTTTTCACATACTGAGTTCAACCAGCCAGACAAAC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGRASPT*ESWAVT
Trigger: TGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCACTTCTGAGTGGTCAGTaGCAATCAAAAGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAALLSGQ*QSKGVT
Trigger: CGTGACACCTTTTGATTGTCACTGACCACTCAGAAG...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCCAGCCACCCTCTTTGTaGCCACTTGAAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSQPPSL*PLEAHS
Trigger: TGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCTG...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTTTGCAAACAAGCAATaGGAGCAGAGGTATCCGGTG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCFANKQ*EQRYPV
Trigger: CACCGGATACCTCTGCTCTCATTGCTTGTTTGCAAA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCGCCCCCAAGGCTTCCTaGCTTGACTCTGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCAPKAS*LDSVAR
Trigger: TCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGC...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACACGTCTGGCATTTCTaGTGCTGGCTCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTHVWHF*CWLRPL
Trigger: CAGGGGCCTGAGCCAGCAGCAGAAATGCCAGACGTG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAATCCATCAAGGCTTTaGCGATCTCTTGACCTGTTT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPNPSRL*RSLDLF
Trigger: AAACAGGTCAAGAGATCGGCAAAGCCTTGATGGATT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTGTGGACAAAAGCACTaGAATTTGCACAAGTATAGG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRCGQKH*NLHKYR
Trigger: CCTATACTTGTGCAAATTGCAGTGCTTTTGTCCACA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGCTGTTTTAGAAACTTaGTGTCTATTATCCGACTCC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRAVLET*CLLSDS
Trigger: GGAGTCGGATAATAGACAGCAAGTTTCTAAAACAGC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTTTTCTACCATCTGCTaGTCAAAAAGCAGATCCGCC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAFSTIC*SKSRSA
Trigger: GGCGGATCTGCTTTTTGAGCAGCAGATGGTAGAAAA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAAGCTTTTCTACCATCTaGTGCTCAAAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTSFSTI*CSKSRS
Trigger: GGATCTGCTTTTTGAGCAGCAGATGGTAGAAAAGCT...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGACAGACTGGTTATGTTaGCCACAAAACTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQTDWLC*PQNLPY
Trigger: ATATGGCAAGTTTTGTGGGCAACATAACCAGTCTGT...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCTGCGCTGCTTCTCCTaGTCAATGAGGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCLRCFS*SMRELG
Trigger: CCCGAGCTCCCTCATTGAGCAGGAGAAGCAGCGCAG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGCTGCTTCTCCAGGCTaGGCTGCTTCTCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTAASPG*AASPAQ
Trigger: TTGAGCAGGAGAAGCAGCGCAGCCTGGAGAAGCAGC...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTGCCAGGTCCTGGCGCTaGTTCTCCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIARSWR*FSRLRC
Trigger: GCAGCGCAGCCTGGAGAAGCAGCGCCAGGACCTGGC...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGGTCATACTGGTATGTaGCCTTCTTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRGHTGM*PSSAGA
Trigger: AGCTCCAGCAGAAGAAGGGCACATACCAGTATGACC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGGTCATACTGGTATGTaGCCTTCTTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFGHTGM*PSSAGA
Trigger: AGCTCCAGCAGAAGAAGGGCACATACCAGTATGACC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGCCTCCCGGCGCAGCTaGTCCTGTTCCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYASRRS*SCSLSS
Trigger: GCTTGAGAGGGAACAGGAGCAGCTGCGCCGGGAGGC...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGTGGTGGAGATCTCTaGCTTCCAGACTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSGGGDL*LPDSSL
Trigger: TAGAGAGGAGTCTGGAAGGCAGAGATCTCCACCACC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTCAGAGCACAGCTTCTaGCTGGCCTGGGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGSEHSF*LAWVRG
Trigger: GCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTACCATGAACTGTCCTaGACACACCAGCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRYHELS*THQLGK
Trigger: TTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTA...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCATTACAAGGAGAAGAATaGAGGTTCAGTACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASLQGEE*RFSTAL
Trigger: GAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAA...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAATCTCCAGCAGCCGCTaGCCCAATTCCATCCACAGG +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTISSSR*PNSIHR
Trigger: CCTGTGGATGGAATTGGGGCAGCGGCTGCTGGAGAT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGGCGTCGCCCCTTCCTaGTTGTGGATACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAGVAPS*LWILRA
Trigger: AGCTCTCAGTATCCACAACCAGGAAGGGGCGACGCC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTCTTTTGCAGCAGCTaGAATCACCACAGAATTCTG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAVFCSS*NHHRIL
Trigger: CAGAATTCTGTGGTGATTCCAGCTGCTGCAAAAGAC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGTTTGTTTCTGAGTTCTaGTGTGGCATTACATCTTCT +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQFVSEF*CGITSS
Trigger: AGAAGATGTAATGCCACACCAGAACTCAGAAACAAA...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGGTGGATCTTGTGAGCTaGGTTGCCTTGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRVDLVS*VALLWC
Trigger: GCACCACAGCAAGGCAACCCAGCTCACAAGATCCAC...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATATTACTGCCTGGTCTaGCACCAGTTCTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEYYCLV*HQFFLH
Trigger: ATGGAGAAAGAACTGGTGCCAGACCAGGCAGTAATA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAATCTTGTCCAGGAGGTaGTGTTCTCTGCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPILSRR*CSLLFL
Trigger: CAGGAAGAGCAGAGAACACCACCTCCTGGACAAGAT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAACCTGCCTTGACTCTGTaGCCAGACTTGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQPALTL*PDLLLV
Trigger: CACCAGGAGCAAGTCTGGCCACAGAGTCAAGGCAGG...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAACGGCATTCTTCTCTTaGCTCAACAAGACGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQETAFFS*LNKTFG
Trigger: TCCAAACGTCTTGTTGAGCCAAGAGAAGAATGCCGT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGAAGTTCTCACATTCTaGGCTCTGCTTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTEVLTF*ALLGSQ
Trigger: CTGGCTTCCAAGCAGAGCCCAGAATGTGAGAACTTC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACTCCTCCACGTCGCCTaGGTCAGCAGGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTLLHVA*VSRLTL
Trigger: GAGAGTGAGCCTGCTGACCCAGGCGACGTGGAGGAG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGAGAAAGAGAGCGCATaGAGCTCCTTAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSEKESA*SSLGQS
Trigger: GCTCTGTCCTAAGGAGCTCCATGCGCTCTCTTTCTC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATTCCTCACCACTGAATaGGTGTCTGAGCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIFLTTE*VSELFG
Trigger: GCCGAAGAGCTCAGACACCCATTCAGTGGTGAGGAA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATTGTGGAAGGTACTGTaGAAGGGCCGTGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPLWKVL*KGRELS
Trigger: GGACAATTCACGGCCCTTCCACAGTACCTTCCACAA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAAGGGCTTCATACACTaGCTACAGCTGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEKGFIH*LQLMGP
Trigger: GGGTCCCATCAGCTGTAGCCAGTGTATGAAGCCCTT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTATTGGCAAATATTaGGGTGGTAGCGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSIGKY*GGSGFI
Trigger: GATGAAACCGCTACCACCCCAATATTTGCCAATAGA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAGTATGGAGACACTTTTaGAGAGCGAGACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQVWRHF*RARHSA
Trigger: AGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATAC...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAATCCTCTGGAAGAATTaGCTATGGATACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTILWKN*LWILIS
Trigger: GCTGATCAGTATCCATAGCCAATTCTTCCAGAGGAT...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGATCACTGTTGACTTCTaGTCCAATGATGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRITVDF*SNDAKM
Trigger: CATCTTTGCATCATTGGACCAGAAGTCAACAGTGAT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAGGTTGGCCAGGTCCTaGCGCTGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFRLARS*RCFSRL
Trigger: CAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAACCT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCGCTCCAGGTCATACTaGTATGTGCCCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSERSRSY*YVPFFC
Trigger: GCAGAAGAAGGGCACATACCAGTATGACCTGGAGCG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGGATCCTCATCAGCTTaGTATGTGGATGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNGSSSA*YVDGKP
Trigger: AGGTTTCCCATCCACATACCAAGCTGATGAGGATCC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAACTGGGGAAGAACGATaGGATCCTCATCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPTGEER*DPHQLG
Trigger: ACCAAGCTGATGAGGATCCCATCGTTCTTCCCCAGT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTACCCTGATTTGGCTATaGAAGGTGCAGATGGCGAGG +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSTLIWL*KVQMAR
Trigger: CCTCGCCATCTGCACCTTCCATAGCCAAATCAGGGT...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAACCAATGACCCTGATTTaGCTATGGAAGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQPMTLI*LWKVQM
Trigger: CATCTGCACCTTCCATAGCCAAATCAGGGTCATTGG...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGCAAGCCTTCTCTCACTaGTTTCACAAATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRQAFSH*FHKCLS
Trigger: TGACAAACATTTGTGAAACCAGTGAGAGAAGGCTTG...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTCTCACGGTTAGGTGGTaGAGATCTCTGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLTVRW*RSLPSR
Trigger: TCTGGAAGGCAGAGATCTCCACCACCTAACCGTGAG...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTCAGAGTGAACAGTGCTaGCTGCCACTTCACTCGGTA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSQSEQC*LPLHSV
Trigger: TACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTG...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGGCGTGGAAACAGTATaGGGAATTCAGTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRGVETV*GIQSES
Trigger: TGACTCGGACTGAATTCCCCATACTGTTTCCACGCC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTAGCGACGGGGCTGGCTaGGACGCATCCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSASDGAG*DASIGG
Trigger: GCCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCGGACTGCAGCACAGGTaGTCCCACCTGGTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCGLQHR*SHLVVG
Trigger: CCCTACAACCAGGTGGGACCACCTGTGCTGCAGTCC...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGAAGCCAGTATGTTGTaGCAAAATTCGAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQEASML*QNSRKH
Trigger: GTGTTTTCTCGAATTTTGCCACAACATACTGGCTTC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp ATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATaGATGTCAAGCTCTGTGGCGACGTGCTCTAACTTC +
Preference number: 4 (lower is better)
Translates to: ITAGRGVRDPLT*MSSSVATCSNF
Trigger: GAAGTTAGAGCACGTCGCCACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp CTGGGGTCACCTCACAGCCACCCTCTTTGTGACCACTaGAAGCCCATTCACCAGGACTGTCTTTCTAAACTC +
Preference number: 4 (lower is better)
Translates to: LGSPHSHPLCDH*KPIHQDCLSKL
Trigger: GAGTTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCTGTGAGGTGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGGTTGCTAGGAATTaGGCTGCATCATACGCTTCA +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLVARN*AASYAS
Trigger: TGAAGCGTATGATGCAGCTCAATTCCTAGCAACCAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAAGTTCAAAGCCTGCTaGTTTCCAGCACTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRKFKAC*FPALVA
Trigger: AGCAACCAGTGCTGGAAATCAGCAGGCTTTGAACTT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGCAGCTTCAGGTGCCTaGATGCCAGCACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAAASGA*MPAPTS
Trigger: AGAAGTTGGTGCTGGCATTCAGGCACCTGAAGCTGC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTGACTGTCCATCTGCTTaGGGTTTGTTTTCATTAGTT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPDCPSA*GLFSLV
Trigger: AACTAATGAAAACAAACCTCAAGCAGATGGACAGTC...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTGTAGAACAAATGGGTaGGGATTTGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCCRTNG*GFALLA
Trigger: AGCCAAAAGGGCAAATCCTCACCCATTTGTTCTACA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTGTCACTGTGTTCTGTTaGCATGCAGAGTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIVTVFC*HAESAQ
Trigger: TTGTGCAGACTCTGCATGTCAACAGAACACAGTGAC...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTGTTATCCACCACTTTaGAAGGACAAAAATCCGCAC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDACYPPL*KDKNPH
Trigger: GTGCGGATTTTTGTCCTTTCAAAGTGGTGGATAACA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAAGCTGCAGAGCTTTCTaGAACCACCAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPSCRAF*NHQKFS
Trigger: GGAAAACTTCTGGTGGTTTCAGAAAGCTCTGCAGCT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCCCATCATCATGGGCTaGGAGCTCCATGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWPIIMG*ELHVCG
Trigger: CCCACAGACATGGAGCTCTCAGCCCATGATGATGGG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTCATCACTGGGTGAGTaGAAGAGGTCAGAATCACTC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLSSLGE*KRSESL
Trigger: GAGTGATTCTGACCTCTTTCACTCACCCAGTGATGA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCGTGTCATCGGTGGATaGACTGGATCCGGTGATATC +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWRVIGG*TGSGDI
Trigger: GATATCACCGGATCCAGTTCATCCACCGATGACACG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTGCAGGCACTTCAGTaGTACTGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLQALQ*YCPSPP
Trigger: AGGAGGAGATGGACAGTATCACTGAAGTGCCTGCAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTATTGGCTATGGATACTaGTCAGCTCATCCAAACAGG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCIGYGY*SAHPNR
Trigger: CCTGTTTGGATGAGCTGATCAGTATCCATAGCCAAT...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTCCTTGGCAAACATCTaGCCACTCTTCATCCTCATG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLSLANI*PLFILM
Trigger: CATGAGGATGAAGAGTGGTCAGATGTTTGCCAAGGA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAACTGTCATCCCCATGCTaGTCAGGAATAAACCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQLSSPC*SGINLS
Trigger: AGAAAGGTTTATTCCTGATCAGCATGGGGATGACAG...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCTTAAAGGTCCTCCTTTaGGAGCCTCTTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFLKVLL*EPLLCW
Trigger: CCAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAA...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGCTCAATGGGGCTGCTaGCAGTCGGCCCAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIAQWGC*QSAQVC
Trigger: GCACACTTGGGCCGACTGTCAGCAGCCCCATTGAGC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGAGGGAAACCAGTCTCTaGGGAGTACTGGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWRETSL*GVLGEL
Trigger: CAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCT...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGICCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGCTTCTGAGTGGTCAGTaGCAATCAAAAGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQLLSGQ*QSKGVT
Trigger: CGTGACACCTTTTGATTGTCACTGACCACTCAGAAG...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGGGAAAGCCTCAAGTaGACAAAGATGAAAACACGG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTGESLK*TKMKTR
Trigger: CCGTGTTTTCATCTTTGTTCACTTGAGGCTTTCCCC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCTCTTTGTGACCACTTaGAGCCCATTCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSELFVTT*SPFTRT
Trigger: AGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGGAAGGTGACGTGCCACTCTCCTTGGGTAATCCCTAGGGTCATTTCGCTGCAAGGGCAATGGTGTGACTaGCCAGCTCTTTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: RKVTCHSPWVIPRVISLQGQWCD*PALSLK
Trigger: CTTCAATGAAAGAGCTGGTCAGTCACACCATTGCCC...TTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGGTCCGTGGGCTCCGGTaGACAGGGAAGAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRVRGLR*TGKKLA
Trigger: GGCCAGTTTCTTCCCTGTGCACCGGAGCCCACGGAC...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAAGGTAGAGAGGGAGTaGTCCTTTCCCTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCKVERE*SFPCLK
Trigger: CTTCAGGCAGGGAAAGGAGCACTCCCTCTCTACCTT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGCCAGAAGAGATGCTaGATCAGGGCATGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESQKRC*IRAWLY
Trigger: ATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGGCTCCCTTTGGGCTaGTTCATTTTGACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRRLPLG*FILTFA
Trigger: TGCAAAGGTCAAAATGAAGCAGCCCAAAGGGAGCCT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCCGACTCCAAGACTCTaGTTCCAGCTGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVPTPRL*FQLFGL
Trigger: GAGTCCAAACAGCTGGAAGCAGAGTCTTGGAGTCGG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTTTCTACCATCTGCTaGTCAAAAAGCAGATCCGCC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQFSTIC*SKSRSA
Trigger: GGCGGATCTGCTTTTTGAGCAGCAGATGGTAGAAAA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCATAACTTGCCACTTTaGTGTCTACAGCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAHNLPL*CLQLQS
Trigger: TGATTGGAGCTGTAGACAGCAAAGTGGCAAGTTATG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCTGGGCCTGCTGCTTCTaGAGGTTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIWACCF*RLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAGGCCCA...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGAGGTACTGGGCCTGCTaGTTCTGCAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLRYWAC*FCRLAR
Trigger: CCTGGCCAACCTGCAGAAGCAGCAGGCCCAGTACCT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTACTCACGCTCGCGCCTaGGCTTCTCCTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGTHARA*ASPRGT
Trigger: AGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATCCTTTTCCAGGTCCTaGTGCCCCTGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTSFSRS*CPCCTS
Trigger: GGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTGTGTGTCCGAGAGATaGTGTTCCTTTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLCVSER*CSFLGT
Trigger: TGTCCCCAAAAAGGAACAGCATCTCTCGGACACACA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACAAGGGCCAGACAGCTaGTGTCTGGGAGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTQGPDS*CLGEAR
Trigger: TCGTGCCTCTCCCAGACAGCAGCTGTCTGGCCCTTG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCAAGGGCCAGACAGCTaGTGTCTGGGAGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFQGPDS*CLGEAR
Trigger: TCGTGCCTCTCCCAGACAGCAGCTGTCTGGCCCTTG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCGAAGCCCCTCCGGACTaGAGCACAGGTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPEAPPD*STGGPT
Trigger: GGTGGGACCACCTGTGCTGCAGTCCGGAGGGGCTTC...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACCCCTGCGCATCCCATaGGGGCAGCAGCACACAGGA +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTPLRIP*GQQHTG
Trigger: TCCTGTGTGCTGCTGCCCGCATGGGATGCGCAGGGG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGATGGGGGTCCTGACTaGTCAAGAAAACGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEDGGPD*SRKRVK
Trigger: CTTTACCCGTTTTCTTGACCAGTCAGGACCCCCATC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCCTGTCTCTGGGGCACTaGAAGGATCCTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALSLGH*KDPVLS
Trigger: TGACAGCACAGGATCCTTCCAGTGCCCCAGAGACAG...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAACTGCTCAGGGACTCCTaGTCTGTGGGCATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQLLRDS*SVGIPE
Trigger: TTCTGGAATGCCCACAGACCAGGAGTCCCTGAGCAG...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTAAATCCGCACGTTCCTaGGTATCCCTTACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSKSARS*VSLTGS
Trigger: TGACCCTGTAAGGGATACCCAGGAACGTGCGGATTT...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCACCTGCCTTGACTCTGTaGCCAGACTTGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSPALTL*PDLLLV
Trigger: CACCAGGAGCAAGTCTGGCCACAGAGTCAAGGCAGG...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTATCTGGCAACAGACATaGCAACAGAGCGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSIWQQT*QQSGAV
Trigger: AACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGAT...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCTGTGGGGAGCTCCTTaGCAACAGGCTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCLWGAP*QQAAVG
Trigger: TCCTACTGCAGCCTGTTGCCAAGGAGCTCCCCACAG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGGCAGAGGTGCGTCCTaGGCAGAGACCATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCGRGAS*AETMQG
Trigger: ACCTTGCATGGTCTCTGCCCAGGACGCACCTCTGCC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGAAGTTCTCACATTCTaGGCTCTGCTTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSEVLTF*ALLGSQ
Trigger: CTGGCTTCCAAGCAGAGCCCAGAATGTGAGAACTTC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAACCGAGGACGCTCCTTaGGCTGTGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKTEDAP*AVRACF
Trigger: GAAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGTTCAGACCTTACTTaGATACACTCTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAGSDLT*IHSFSL
Trigger: AAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGGTTCAGACCTTACTTaGATACACTCTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASGSDLT*IHSFSL
Trigger: AAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTGGCCCCTTCTGAGTaGTCAGTGACAATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSVAPSE*SVTIKR
Trigger: CCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTAGACTGAAACTCCGGTaGTTCATTTCTGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIRLKLR*FISASL
Trigger: CAGCGATGCAGAAATGAACCACCGGAGTTTCAGTCT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTAGCACAGCTTCTGCCTaGCCTGGGTGCGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSASTASA*PGCEAD
Trigger: GTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATAAGGTAGGTCAGAGGTaGCGAGTTTCTTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNKVGQR*RVSSFS
Trigger: TGAGAATGAAGAAACTCGCCACCTCTGACCTACCTT...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCAAATCGTTTTGAGTaGGGTCTGGGCAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIPNRFE*GLGRCE
Trigger: TTCACATCTGCCCAGACCCCACTCAAAACGATTTGG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGGAAATCTGGGGGCTCTaGATAGGAACTCCATCTTTC +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQEIWGL*IGTPSF
Trigger: GAAAGATGGAGTTCCTATCCAGAGCCCCCAGATTTC...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAATCGTTCTGCAGTGTCTaGGGTCACCTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKSFCSV*GHLTAT
Trigger: GGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGA...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGGAAGGTGACGTGCCACTCTCCTTGGGTAATCCCTAGGGTCATTTCGCTGCAAATACTCAAGGCTGGGTaGACTCTACAGGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: RKVTCHSPWVIPRVISLQILKAG*TLQGNG
Trigger: ACCATTGCCCTGTAGAGTCCACCCAGCCTTGAGTAT...TTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCCAATGTATCAGAACTaGCCTTCCGAGTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTPMYQN*PSEYLY
Trigger: GTACAAGTACTCGGAAGGTCAGTTCTGATACATTGG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGGAAGGTGACGTGCCACTCTCCTTGGGTAATCCCTAGGGTCATTTCGCTGCAAAAGTTCAAAGCCTGCTaGTTTCCAGCACTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RKVTCHSPWVIPRVISLQKFKAC*FPALVA
Trigger: AGCAACCAGTGCTGGAAATCAGCAGGCTTTGAACTT...TTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGAAGAAGAAAGTCGCTaGGGGTCCGTGGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAEEESR*GSVGSG
Trigger: ACCGGAGCCCACGGACCCTCAGCGACTTTCTTCTTC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCACAGGCTTACTTGTaGCGTGCACGTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPQAYL*RARQRL
Trigger: GAGCCTCTGACGTGCACGTCACAAGTAAGCCTGTGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAATCACCACAGAATTCTaGTCTACTGGAGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPITTEF*STGASA
Trigger: TGCTGATGCTCCAGTAGATCAGAATTCTGTGGTGAT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAATTACAGGGTCAGAGGTaGCTGTATGAGCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQLQGQR*LYEPVG
Trigger: ACCCACAGGCTCATACAGTCACCTCTGACCCTGTAA...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTCATCCTTGGTTACTaGTTCACTGCCTGGACTGTT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSVILGY*FTAWTV
Trigger: AACAGTCCAGGCAGTGAATCAGTAACCAAGGATGAC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGCTGCAGAGCTTTCTaGAACCACCAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESCRAF*NHQKFS
Trigger: GGAAAACTTCTGGTGGTTTCAGAAAGCTCTGCAGCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATTCCTGCAAAGTTCCTaGAGAGAGAGCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAFLQSS*RESIFL
Trigger: AAGGAAAATGCTCTCTCTTCAGGAACTTTGCAGGAA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGTGAATTACTTAGCTaGAGTGCTTTGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTGELLS*SALSLA
Trigger: TGCCAAGGACAAAGCACTTCAGCTAAGTAATTCACC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCAAGGCTTCCTGCCTTaGCTCTGTGGCCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLQGFLP*LCGQTC
Trigger: GCAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGTCTTGGGTGTTGTGTaGTATATTCTCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRVLGVV*YILSSG
Trigger: CCCAGAAGAGAGAATATATCACACAACACCCAAGAC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGCTCCTTTCCCTGCCTaGAGGCGGGGCTCGCATGAC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLAPFPA*RRGSHD
Trigger: GTCATGCGAGCCCCGCCTTCAGGCAGGGAAAGGAGC...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCAGGGCTGGACAGTaGCATGTGACAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTLRAGQ*HVTGLP
Trigger: GGGGAGGCCTGTCACATGTCACTGTCCAGCCCTGAG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATTCTCACCTGAAAACTaGTTTACAAGCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAFSPEN*FTSTSP
Trigger: AGGGGATGTGCTTGTAAATCAGTTTTCAGGTGAGAA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCCACTCACCAAACCCTaGAGGATCTCCACCTCATTT +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWPLTKP*RISTSF
Trigger: AAATGAGGTGGAGATCCTTCAGGGTTTGGTGAGTGG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTCTTCTCGCCTCCTTTTaGAGCATTCATCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLLASF*SIHLMA
Trigger: AGCCATCAGATGAATGCTTCAAAAGGAGGCGAGAAG...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCTGTTTCTGAAGGGTaGGTATTCTCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQSVSEG*VFSMTE
Trigger: TTCTGTCATGGAGAATACTCACCCTTCAGAAACAGA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLFHRIN*SRSLVL
Trigger: GAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGATAAGACTGTCCATCTaGTTGAGGTTTGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRIRLSI*LRFVFI
Trigger: AATGAAAACAAACCTCAAGCAGATGGACAGTCTTAT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGAGAGTCCACAATAGGTaGTGGCTCCACCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWRVHNR*WLHLFP
Trigger: GGGGAAGAGGTGGAGCCAGCACCTATTGTGGACTCT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGGAGCTGTTGTGCTCTaGCCCCAAGGCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYGAVVL*PQGFLP
Trigger: AGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCC...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCCCTCAGTAAGCAGTaGTCCAGCGGCCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPLSKQ*SSGLDL
Trigger: CAAGTCAAGGCCGCTGGAGCACTGCTTACTGAGGGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAGCCAGAAGAGATGCTaGATCAGGGCATGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCSQKRC*IRAWLY
Trigger: ATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGTGCTAGATCTTCCTaGTCCACTTCATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQCARSS*STSLSL
Trigger: CAAAGACAATGAAGTGGAGCAGGAAGATCTAGCACA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCATAACTTGCCACTTTaGTGTCTACAGCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCHNLPL*CLQLQS
Trigger: TGATTGGAGCTGTAGACAGCAAAGTGGCAAGTTATG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGACCTTTCTCCTCATGTaGCACTTCTCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLTFLLM*HFSHNQ
Trigger: CTGATTGTGAGAGAAGTGGCACATGAGGAGAAAGGT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCCTCTGGGAGAGGGGTaGTGCACTCAGCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPPLGEG*CTQPCP
Trigger: GGGACATGGCTGAGTGCAGCACCCCTCTCCCAGAGG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGCCTCTGGGAGAGGGGTaGTGCACTCAGCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQPLGEG*CTQPCP
Trigger: GGGACATGGCTGAGTGCAGCACCCCTCTCCCAGAGG...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCAGTCGGCCCAAGTGTaGCTCCCAGATTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCQSAQV*LPDFHS
Trigger: TGAGTGGAAATCTGGGAGGCACACTTGGGCCGACTG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTCCTCCAAAGGTCTCTaGTCTCCGGGGCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCSSKGL*SPGQGN
Trigger: GTTTCCCTGCCCCGGAGAGCAGAGACCTTTGGAGGA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTGGGCCTGCTGCTTCTaGAGGTTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNWACCF*RLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAGGCCCA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGAGGTACTGGGCCTGCTaGTTCTGCAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRRYWAC*FCRLAR
Trigger: CCTGGCCAACCTGCAGAAGCAGCAGGCCCAGTACCT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGACTCACGCTCGCGCCTaGGCTTCTCCTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYETHARA*ASPRGT
Trigger: AGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGT...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTCAGAGCACAGCTTCTaGCTGGCCTGGGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNSEHSF*LAWVRG
Trigger: GCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAATAAATATCTCCATCTaGAAGGCCAGCTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEINISI*KASLQF
Trigger: GAATTGCAAGCTGGCCTTGCAGATGGAGATATTTAT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCCTGAGGCGGGTGGATTaGCTGAGCTCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPLRRVD*LSSGVQ
Trigger: TTGAACTCCTGAGCTCAGGCAATCCACCCGCCTCAG...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTACAGTGACGGAGGGTaGAACCCAAAAATACCAAGT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLYSDGG*NPKIPS
Trigger: ACTTGGTATTTTTGGGTTCCACCCTCCGTCACTGTA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGCCCCTTCCTGGTTGTaGATACTGAGAGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAAPSWL*ILRAPR
Trigger: CCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAGGCGTCGCCCCTTCCTaGTTGTGGATACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTGVAPS*LWILRA
Trigger: AGCTCTCAGTATCCACAACCAGGAAGGGGCGACGCC...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCTGCTCAGGGACTCCTaGTCTGTGGGCATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCLLRDS*SVGIPE
Trigger: TTCTGGAATGCCCACAGACCAGGAGTCCCTGAGCAG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTCCCCTGCAGTGTCTaGGGTACTGACATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSFPCSV*GTDICC
Trigger: ACAACAAATGTCAGTACCCCAGACACTGCAGGGGAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCAGAATTCTGATCTACTaGAGCATCAGCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFRILIY*SISTLL
Trigger: GAGGAGAGTGCTGATGCTCCAGTAGATCAGAATTCT...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCTCAGCGTCACCCATaGTACAGCTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPQRHP*YSCGLL
Trigger: GAGCAGACCACAGCTGTACCATGGGTGACGCTGAGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAGACCCAACTCAGGGCTaGACAGTGACATGTGACAGG +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKDPTQG*TVTCDR
Trigger: CCTGTCACATGTCACTGTCCAGCCCTGAGTTGGGTC...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGCTGCAAGGCTCCCCGTaGCTTCCTCAGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYELQGSP*LPQEYC
Trigger: GCAGTACTCCTGAGGAAGCCACGGGGAGCCTTGCAG...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCCTCTTCCTCTGGCTTTaGGAAGATGATGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSLFLWL*EDDAVH
Trigger: ATGGACAGCATCATCTTCCCAAAGCCAGAGGAAGAG...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTATCCTATGTTCTCTCTaGTCTGACTCCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIILCSL*SDSRSS
Trigger: AGAGGATCTGGAGTCAGACCAGAGAGAACATAGGAT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGCTTGGAGGGGCTATGTaGCAGGAAATTATAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRLGGAM*QEIIVL
Trigger: GAGAACTATAATTTCCTGCCACATAGCCCCTCCAAG...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAAGCGAGACACTCTGCTaGGATCGTCTATTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGISETLC*DRLLAN
Trigger: ATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCT...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTAAGCAATATGCACTCTaGAATTCCAAGCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAKQYAL*NSKPSN
Trigger: GTTAGAAGGCTTGGAATTCCAGAGTGCATATTGCTT...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTCTAGGGCTATGTGTTaGGGAGCAATCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEASRAMC*GAILWE
Trigger: CTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTAGGTTGGCCAGGTCCTaGCGCTGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIRLARS*RCFSRL
Trigger: CAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAACCT...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCATCAGCTTGGTATGTaGATGGGAAACCTGACACAG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEHQLGM*MGNLTQ
Trigger: CTGTGTCAGGTTTCCCATCCACATACCAAGCTGATG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAACAGCCAGGAGGCCGTaGCCCCTTCTGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTTARRP*PLLSGQ
Trigger: CTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGT...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTACAGCCAGGAGGCCGTaGCCCCTTCTGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGITARRP*PLLSGQ
Trigger: CTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGT...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATGCGAGGCTGACCCCTaGCAGTGGTGTGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLCEADP*QWCALT
Trigger: GGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAATGAAACATCACAGCTaGGCGGGGAGTAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTMKHHS*AGSKRP
Trigger: GGGTCTCTTACTCCCCGCCCAGCTGTGATGTTTCAT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTTGCAGACTGTATTCCTaGATGAAGTTGGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGICRLYS*MKLGGL
Trigger: CAAACCACCCAACTTCATCCAGGAATACAGTCTGCA...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAGGCCGGGGAAGGTGTaGGGGGTGAGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLRPGKV*GVSASC
Trigger: GCAGGAAGCACTCACCCCCCACACCTTCCCCGGCCT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGGAAATGGGTGTTCATaGTGTGAATCAGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIGNGCS*CESDSE
Trigger: CTCTGAGTCTGATTCACATCATGAACACCCATTTCC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGAAATGGGTGTTCATaGTGTGAATCAGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEGNGCS*CESDSE
Trigger: CTCTGAGTCTGATTCACATCATGAACACCCATTTCC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCCTCCTCACGACTTCGTaGAGTTTCCGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALLTTS*SFRFCC
Trigger: ACAGCAGAAACGGAAACTTCACGAAGTCGTGAGGAG...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTATCGGGTGGATCTTGTaGGCTGGGTTGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFIGWIL*AGLPCC
Trigger: ACAGCAAGGCAACCCAGCTCACAAGATCCACCCGAT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCAGAGAAAGTACTGTCTaGTATTACTGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSRESTV*YYCLVW
Trigger: CCAGACCAGGCAGTAATATCAGACAGTACTTTCTCT...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTTCCCCATCCCGTGCTaGAGCTCTGCAGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNFPIPC*SSAAVE
Trigger: CTCCACTGCTGCAGAGCTTCAGCACGGGATGGGGAA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTACCTTGAGTCAGCAGTaGGACTTGTGGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCTLSQQ*DLWGHF
Trigger: GAAGTGGCCCCACAAGTCTCACTGCTGACTCAAGGT...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGACACATCACTGCCATaGGAAGAATGTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEADTSLP*EECRSS
Trigger: ACTGGACCGACATTCTTCTCATGGCAGTGATGTGTC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTCTGCATTCTCACCTaGAAACTGATTTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQFCILT*KLIYKH
Trigger: GTGCTTGTAAATCAGTTTTCAGGTGAGAATGCAGAA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTGGCATAAAGGTCTTTaGAGTAGTTTACAGACTGGT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCWHKGL*SSLQTG
Trigger: ACCAGTCTGTAAACTACTTCAAAGACCTTTATGCCA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATAAGCCTTCTAACAACTaGACTGCTCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNKPSNN*TAHLLL
Trigger: AAGAAGAAGATGAGCAGTTCAGTTGTTAGAAGGCTT...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTACTTGGTAATCCGCTaGGTTACAAGCAATATGCAC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLYLVIR*VTSNMH
Trigger: GTGCATATTGCTTGTAACTCAGCGGATTACCAAGTA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCACTCTTCATCCTCATaGTTGACTTGCTATCTGTCT +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIHSSSS*LTCYLS
Trigger: AGACAGATAGCAAGTCAATCATGAGGATGAAGAGTG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGTGAGAAGAACTGCTTaGACCTCTTTCAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIVRRTA*TSFNLP
Trigger: AGGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCAC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAACCACTCACCAAACCCTaGAGGATCTCCACCTCATTT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQPLTKP*RISTSF
Trigger: AAATGAGGTGGAGATCCTTCAGGGTTTGGTGAGTGG...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTTTGAAGCATTCATCTaGTGGCTGTCAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLFEAFI*WLSNPP
Trigger: TGGAGGATTTGACAGCCATCAGATGAATGCTTCAAA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCACCCTGCAGAGCGCTaGGGAGCTCGTAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAHPAER*GARRDE
Trigger: TTCATCTCTACGAGCTCCTCAGCGCTCTGCAGGGTG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTGTGGATGGGAAACCTaGCACAGGTCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCCGWET*HRSRSV
Trigger: GACAGAACGGGACCTGTGTCAGGTTTCCCATCCACA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTTTGTCTGGCTGGTTaGACTCAGTATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEVCLAG*TQYVKR
Trigger: CCTTTTCACATACTGAGTTCAACCAGCCAGACAAAC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAALVLS*PDAWCR
Trigger: TCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCACTTCACTCGGTATTaGCTGGATAGTTTAGACTGT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHFTRY*LDSLDC
Trigger: ACAGTCTAAACTATCCAGTCAATACCGAGTGAAGTG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGTGATTTCTTTAGCTTaGTGGAGAACATGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIVISLA*WRTWCP
Trigger: GGGACACCATGTTCTCCATCAAGCTAAAGAAATCAC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTAATGAAGCCAACCGATaGGAGCATTTAAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGINEANR*EHLKCT
Trigger: TGTGCACTTTAAATGCTCTCATCGGTTGGCTTCATT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCCTCTTCTTTGTCTCTaGGGATGGACGAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGPLLCL*GWTRAT
Trigger: CGTCGCTCTCGTCCATCCTCAGAGACAAAGAAGAGG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCTCTTCTTTGTCTCTaGGGATGGACGAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPLLCL*GWTRAT
Trigger: CGTCGCTCTCGTCCATCCTCAGAGACAAAGAAGAGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCATGCCCTCAGGTGGTaGCGAAAGGTAGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYHALRW*RKVGEA
Trigger: AGCTTCCCCTACCTTTCGTCACCACCTGAGGGCATG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCATGCCCTCAGGTGGTaGCGAAAGGTAGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAHALRW*RKVGEA
Trigger: AGCTTCCCCTACCTTTCGTCACCACCTGAGGGCATG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGGGACTTTCAGTCTGTaGAACAGGGCTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAGTFSL*NRAPWA
Trigger: TGCCCAGGGAGCCCTGTTGCACAGACTGAAAGTCCC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGTGGTTACTGATTCACTaGCTGGACTGTTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWWLLIH*LDCLPE
Trigger: CTCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCA...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGGGAGCTGTTGTGCTCTaGCCCCAAGGCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQGAVVL*PQGFLP
Trigger: AGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCC...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCCTGGGCAGAGACCATaGAAGGTAGAGAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYPGQRP*KVEREC
Trigger: GCACTCCCTCTCTACCTTGCATGGTCTCTGCCCAGG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCTGGGTCATTGGGCCTTaGTTCATCTTCAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVWVIGP*FIFSVA
Trigger: TGCTACACTGAAGATGAAGCAAGGCCCAATGACCCA...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGATGGAACTGAAAGTGTaGCCGTTGACAGTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRMELKV*PLTVFL
Trigger: TAAGAAGACTGTCAACGGGCACACTTTCAGTTCCAT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCCGACTCCAAGACTCTaGTTCCAGCTGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWPTPRL*FQLFGL
Trigger: GAGTCCAAACAGCTGGAAGCAGAGTCTTGGAGTCGG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCATATATTACTTCTTaGCGTTTGACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSYITS*RLTTSF
Trigger: GAAAGATGTGGTCAAACGGCAAGAAGTAATATATGA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAAGCTTTTCTACCATCTaGTGCTCAAAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPSFSTI*CSKSRS
Trigger: GGATCTGCTTTTTGAGCAGCAGATGGTAGAAAAGCT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGTGTGCTAGATCTTCCTaGTCCACTTCATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQCARSS*STSLSL
Trigger: CAAAGACAATGAAGTGGAGCAGGAAGATCTAGCACA...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGTCAGTGAGAAGAACTaGTTGAACCTCTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLVSEKN*LNLFQP
Trigger: AGGTTGAAAGAGGTTCAAGCAGTTCTTCTCACTGAC...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGCTGCTTCTCCAGGCTaGGCTGCTTCTCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAAASPG*AASPAQ
Trigger: TTGAGCAGGAGAAGCAGCGCAGCCTGGAGAAGCAGC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGGTTCTGTTGCTGCACTaGAGACTGTATTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRVLLLH*RLYSWM
Trigger: CATCCAGGAATACAGTCTGCAGTGCAGCAACAGAAC...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGTAAGCGGTTCTGTTaGTGCACTGCAGACTGTATT +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWGKRFC*CTADCI
Trigger: AATACAGTCTGCAGTGCAGCAACAGAACCGCTTACC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCCAAAACGCAGAGGGTaGACATCGTTCTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWPKRRG*TSFCSV
Trigger: GACACTGCAGAACGATGTGCACCCTCTGCGTTTTGG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTGCAACAGGGCTCCCTaGGCAGCACTGAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNCNRAP*AALSAL
Trigger: GAGAGCACTCAGTGCTGCCCAGGGAGCCCTGTTGCA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTTCAGCTTTCACGTCTaGCATTTCTGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAFSFHV*HFCCWL
Trigger: GAGCCAGCAGCAGAAATGCCAGACGTGAAAGCTGAA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTTCCTCACCACTGAATaGGTGTCTGAGCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCFLTTE*VSELFG
Trigger: GCCGAAGAGCTCAGACACCCATTCAGTGGTGAGGAA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTTCCGCCATCATCCCCTaGCTGTACACACCACTCATG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFSAIIP*LYTPLM
Trigger: CATGAGTGGTGTGTACAGCCAGGGGATGATGGCGGA...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTGGAAGAATTGGCTATaGATACTGATCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLWKNWL*ILISSS
Trigger: GGATGAGCTGATCAGTATCCATAGCCAATTCTTCCA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAATCCTCTGGAAGAATTaGCTATGGATACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPILWKN*LWILIS
Trigger: GCTGATCAGTATCCATAGCCAATTCTTCCAGAGGAT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTATCCTCTGGAAGAATTaGCTATGGATACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIILWKN*LWILIS
Trigger: GCTGATCAGTATCCATAGCCAATTCTTCCAGAGGAT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTGTTCCTCTTTGGAGCTaGCATGGACTTCTACCATCT +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCVPLWS*HGLLPS
Trigger: AGATGGTAGAAGTCCATGCCAGCTCCAAAGAGGAAC...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTCTAGGGCTATGTGTTaGGGAGCAATCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCSRAMC*GAILWE
Trigger: CTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGTCCTTTGTTTGTCTaGCTGGTTGAACTCAGTATG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEGPLFV*LVELSM
Trigger: CATACTGAGTTCAACCAGCCAGACAAACAAAGGACC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPLLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEADWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATATCCACTGTTAACTTaGGGACCAGTGCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIYPLLT*GPVQVL
Trigger: AAGGACTTGCACTGGTCCCCAAGTTAACAGTGGATA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACAGTCCTGTCCACCTTaGAGATGTCACAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTQSCPP*RCHRGC
Trigger: ACAGCCTCTGTGACATCTCCAAGGTGGACAGGACTG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATAGTTTAGACTGTTaGGCTAGACCTGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTDSLDC*ARPGSP
Trigger: GGGTGAGCCAGGTCTAGCCCAACAGTCTAAACTATC...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACGAGTACTTGTACAGTaGCGGAGGGTGGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTRVLVQ*RRVEPK
Trigger: TTTGGGTTCCACCCTCCGTCACTGTACAAGTACTCG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAACCCAGATGGGGGTCCTaGCTGGTCAAGAAAACGGGT +
Preference number: 4 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQPRWGS*LVKKTG
Trigger: ACCCGTTTTCTTGACCAGTCAGGACCCCCATCTGGG...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGATGACCAAGTCTCTCTaGAGCACAGCATCTCCACTG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWMTKSL*STASPL
Trigger: CAGTGGAGATGCTGTGCTTCAGAGAGACTTGGTCAT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTTGGCATCTGGGTTCATaGGCCCATGTTCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFWHLGS*AHVPFP
Trigger: GGGAAATGGAACATGGGCTCATGAACCCAGATGCCA...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACCACAGGCTTACTTGTaGCGTGCACGTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTPQAYL*RARQRL
Trigger: GAGCCTCTGACGTGCACGTCACAAGTAAGCCTGTGG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACTCCTCACGACTTCGTaGAGTTTCCGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTLLTTS*SFRFCC
Trigger: ACAGCAGAAACGGAAACTTCACGAAGTCGTGAGGAG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTCAGAGGTGACTGTATaGGCCTGTGGGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGSEVTV*ACGSSQ
Trigger: CTGTGAAGACCCACAGGCTCATACAGTCACCTCTGA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACCCATCATCATGGGCTaGGAGCTCCATGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTPIIMG*ELHVCG
Trigger: CCCACAGACATGGAGCTCTCAGCCCATGATGATGGG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCGTGTCATCGGTGGATaGACTGGATCCGGTGATATC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGRVIGG*TGSGDI
Trigger: GATATCACCGGATCCAGTTCATCCACCGATGACACG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACAGAATGTCGGTCCAGTaGAGCCGTGTCATCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYRMSVQ*SRVIGG
Trigger: TCCACCGATGACACGGCTTCACTGGACCGACATTCT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGCCAATCCAGGATGGCTaGTTGTCATTAATGAGATGG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRPIQDG*LSLMRW
Trigger: CCATCTCATTAATGACAATCAGCCATCCTGGATTGG...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTACACTGGCTACAGCTaGTGGGACCCACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGYTGYS*WDPQQE
Trigger: TTCCTGTTGTGGGTCCCATCAGCTGTAGCCAGTGTA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAAGGCATCTTTGTTGGTaGAGGGCTTCATACACTGGC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKRHLCW*RASYTG
Trigger: GCCAGTGTATGAAGCCCTTCACCAACAAAGATGCCT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTCTCACCTGAAAACTaGTTTACAAGCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSFSPEN*FTSTSP
Trigger: AGGGGATGTGCTTGTAAATCAGTTTTCAGGTGAGAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCTGGCATAAAGGTCTTTaGAGTAGTTTACAGACTGGT +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFWHKGL*SSLQTG
Trigger: ACCAGTCTGTAAACTACTTCAAAGACCTTTATGCCA...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGGTTTGTCTGGCTGGTTaGACTCAGTATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRVCLAG*TQYVKR
Trigger: CCTTTTCACATACTGAGTTCAACCAGCCAGACAAAC...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRLRSTG*TADMRG
Trigger: CCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAGGGAAACCAGTCTCTaGGGAGTACTGGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFRETSL*GVLGEL
Trigger: CAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTSKDTE*TVLAAT
Trigger: AGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGA...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCCTTTGGTCTGTTTCTaGAGGGTGAGTATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVPLVCF*RVSILH
Trigger: ATGGAGAATACTCACCCTTCAGAAACAGACCAAAGG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCAGCCACCCTCTTTGTaGCCACTTGAAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLQPPSL*PLEAHS
Trigger: TGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCTG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCCTAGACGGTCCTGCTaGAGGAAGGCAAGGCACACA +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRPRRSC*RKARHT
Trigger: TGTGTGCCTTGCCTTCCTTCAGCAGGACCGTCTAGG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAAGACCCACAGGAAGGTaGCGTGCCACTCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSRPTGR*RATLLG
Trigger: CCCAAGGAGAGTGGCACGTCACCTTCCTGTGGGTCT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSFHRIN*SRSLVL
Trigger: GAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCTGGGCAGCACTGAGTaGTCTCAGTCTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGLGSTE*SQSLQK
Trigger: CTTCTGAAGAGACTGAGAGCACTCAGTGCTGCCCAG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCATGTTCCATTTCCCCTaGAGTGTCTGGGGTACTGAC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCMFHFP*SVWGTD
Trigger: GTCAGTACCCCAGACACTGCAGGGGAAATGGAACAT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATCTTGTGAGCTGGGTTaGCTTGCTGTGGTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTSCELG*LAVVLS
Trigger: CGAAAGCACCACAGCAAGGCAACCCAGCTCACAAGA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTCCTTGGCAACAGGCTaGAGTAGGACAGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCSLATG*SRTGCA
Trigger: AGCACATCCTGTCCTACTGCAGCCTGTTGCCAAGGA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCCCCTCAGTAAGCAGTaGTCCAGCGGCCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRPLSKQ*SSGLDL
Trigger: CAAGTCAAGGCCGCTGGAGCACTGCTTACTGAGGGG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGGAAGCCAGAAGAGATaGTGCATCAGGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYEGSQKR*CIRAWL
Trigger: GAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCC...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTTCTGCATCGCTGGCTaGATTTTTCCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAFCIAG*IFPRPP
Trigger: TGGGGGCCTGGGAAAAATGCAGCCAGCGATGCAGAA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTTCTGCATCGCTGGCTaGATTTTTCCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRFCIAG*IFPRPP
Trigger: TGGGGGCCTGGGAAAAATGCAGCCAGCGATGCAGAA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACTTCTGCATCGCTGGCTaGATTTTTCCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYFCIAG*IFPRPP
Trigger: TGGGGGCCTGGGAAAAATGCAGCCAGCGATGCAGAA...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCGACTCCAAGACTCTaGTTCCAGCTGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPTPRL*FQLFGL
Trigger: GAGTCCAAACAGCTGGAAGCAGAGTCTTGGAGTCGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGCTGTTTTAGAAACTTaGTGTCTATTATCCGACTCC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPAVLET*CLLSDS
Trigger: GGAGTCGGATAATAGACAGCAAGTTTCTAAAACAGC...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGGCTGTTTTAGAAACTTaGTGTCTATTATCCGACTCC +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQAVLET*CLLSDS
Trigger: GGAGTCGGATAATAGACAGCAAGTTTCTAAAACAGC...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGACAGACTGGTTATGTTaGCCACAAAACTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRTDWLC*PQNLPY
Trigger: ATATGGCAAGTTTTGTGGGCAACATAACCAGTCTGT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGACCTTTCTCCTCATGTaGCACTTCTCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRTFLLM*HFSHNQ
Trigger: CTGATTGTGAGAGAAGTGGCACATGAGGAGAAAGGT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGGACCGACCACATCTTaGTCAATGGGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIGPTTS*SMGLLT
Trigger: TGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTTCTGCAAGGCCAGCTTaGAATTCATCAATAAGCACC +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCSARPA*NSSIST
Trigger: GGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGA...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCGGAACTCGGAGCCAGTaGCCAGAACAGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPGTRSQ*PEQTAK
Trigger: CTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTTCC...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTCAGTACTGCCCTCCTaGAAATCCCAGGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSASVLPS*KSQEGN
Trigger: GTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCGGGTGCACATCGTTCTaGAGTGTCTGGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPGCTSF*SVWGHL
Trigger: GAGGTGACCCCAGACACTGCAGAACGATGTGCACCC...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGCATCCATAGGTGGCTaGGCACCTAGACGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLASIGG*APRRSC
Trigger: GCAGGACCGTCTAGGTGCGCAGCCACCTATGGATGC...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCATAAGTTTAAAAATTaGTCCAGTGCAACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHKFKN*SSATVS
Trigger: GGAGACGGTTGCACTGGACCAATTTTTAAACTTATG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCATAAGTTTAAAAATTaGTCCAGTGCAACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTHKFKN*SSATVS
Trigger: GGAGACGGTTGCACTGGACCAATTTTTAAACTTATG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTATACTGGGCTGTGCCTaGCTCCATGACCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGILGCA*LHDQVS
Trigger: AGAGACTTGGTCATGGAGCCAGGCACAGCCCAGTAT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGGACTGTATGAGCCTGTaGGTCTTCACAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRDCMSL*VFTVGG
Trigger: GCCTCCCACTGTGAAGACCCACAGGCTCATACAGTC...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGACTGTATGAGCCTGTaGGTCTTCACAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIDCMSL*VFTVGG
Trigger: GCCTCCCACTGTGAAGACCCACAGGCTCATACAGTC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTATTCGAATTTCCATCTaGGCCATCTCTATAATCTGT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCIRISI*AISIIC
Trigger: ACAGATTATAGAGATGGCCCAGATGGAAATTCGAAT...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCAGCAGTGGAGGATGTaGACAGGCCTACTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNQQWRM*TGLLPC
Trigger: ACAGGGCAGTAGGCCTGTCCACATCCTCCACTGCTG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCAGCAGTGGAGGATGTaGACAGGCCTACTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRQQWRM*TGLLPC
Trigger: ACAGGGCAGTAGGCCTGTCCACATCCTCCACTGCTG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCATCTGGCAACAGACATaGCAACAGAGCGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCIWQQT*QQSGAV
Trigger: AACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGAT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCAAGAGGTATCATCTCTaGGGTTCCAACTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCKRYHL*GSNSLW
Trigger: CCACAGGGAGTTGGAACCCCAGAGATGATACCTCTT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCCCATGGTACAGCTGTaGTCTGCTCCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNPMVQL*SAPSSF
Trigger: GAAGCTGGAGGGAGCAGACCACAGCTGTACCATGGG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCCTCAGCGTCACCCATaGTACAGCTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRPQRHP*YSCGLL
Trigger: GAGCAGACCACAGCTGTACCATGGGTGACGCTGAGG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAGGGGCCCCATCATCATaGGCTGAGAGCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTGAPSS*AESSMS
Trigger: AGACATGGAGCTCTCAGCCCATGATGATGGGGCCCC...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACATGCTGCATCAGGGCATaGCTCTATTGTACACCAGTT +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTCCIRA*LYCTPV
Trigger: AACTGGTGTACAATAGAGCCATGCCCTGATGCAGCA...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACACTCTTCCTCTGGCTTTaGGAAGATGATGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTLFLWL*EDDAVH
Trigger: ATGGACAGCATCATCTTCCCAAAGCCAGAGGAAGAG...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTTGTCATTAATGAGATaGATTTTGTCAATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDALSLMR*ILSMER
Trigger: CCTCTCCATTGACAAAATCCATCTCATTAATGACAA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCTCTCGGCAGCCTTTGTaGACAAAAGCACTGCAATTT +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVSRQPL*TKALQF
Trigger: AAATTGCAGTGCTTTTGTCCACAAAGGCTGCCGAGA...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACACCGAGGACGCTCCTTaGGCTGTGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNTEDAP*AVRACF
Trigger: GAAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGT...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATCTATTGGCAAATATTaGGGTGGTAGCGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGISIGKY*GGSGFI
Trigger: GATGAAACCGCTACCACCCCAATATTTGCCAATAGA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGACTTCTACCATCTCTaGATCTGTCATCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQDFYHL*ICHPHA
Trigger: AGCATGGGGATGACAGATCCAGAGATGGTAGAAGTC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGACTGGGGAAGAACGATaGGATCCTCATCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWTGEER*DPHQLG
Trigger: ACCAAGCTGATGAGGATCCCATCGTTCTTCCCCAGT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCTGGCTCTGCCCTTCTaGTCCTTTGTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLLALPF*SFVCLA
Trigger: AGCCAGACAAACAAAGGACCAGAAGGGCAGAGCCAG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTDWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGCAAGCCTTCTCTCACTaGTTTCACAAATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQQAFSH*FHKCLS
Trigger: TGACAAACATTTGTGAAACCAGTGAGAGAAGGCTTG...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTCTCCAGATCTGCACTaGCAGGAACTGCTACACATG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCSPDLH*QELLHM
Trigger: CATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAPAHTS*GKPQVN
Trigger: GTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAATGAAACATCACAGCTaGGCGGGGAGTAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTMKHHS*AGSKRP
Trigger: GGGTCTCTTACTCCCCGCCCAGCTGTGATGTTTCAT...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCTGGATGAAGTTGGGTaGTTTGAGGGAATTCCGGGC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGLDEVG*FEGIPG
Trigger: GCCCGGAATTCCCTCAAACCACCCAACTTCATCCAG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAATCGATTCTGGAAATCTaGGGGCTCTGGATAGGAACT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQSILEI*GLWIGT
Trigger: AGTTCCTATCCAGAGCCCCCAGATTTCCAGAATCGA...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTAGCGACGGGGCTGGCTaGGACGCATCCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCSDGAG*DASIGG
Trigger: GCCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAACGCATTGAACTCCGGTaGTTCATTTCTGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKRIELR*FISASL
Trigger: CAGCGATGCAGAAATGAACCACCGGAGTTCAATGCG...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTCATCCTGGACGAAATaGAAGTCTTCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWSSWTK*KSSSAT
Trigger: GGTGGCTGAAGAAGACTTTCATTTCGTCCAGGATGA...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCTGTGCCTGGCTCCATaGCCAAGTCTCTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPLCLAP*PSLSEA
Trigger: TGCTTCAGAGAGACTTGGTCATGGAGCCAGGCACAG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAACTGACATTTGTTGTTaGAATGCCTCCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTTDICC*NASQFT
Trigger: GGTGAACTGGGAGGCATTTCAACAACAAATGTCAGT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGATTACTAAATGCAAGTaGAGACTCAGCAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLITKCK*RLSRFV
Trigger: AACAAACCTGCTGAGTCTTCACTTGCATTTAGTAAT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTCAGAGGTGACTGTATaGGCCTGTGGGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRSEVTV*ACGSSQ
Trigger: CTGTGAAGACCCACAGGCTCATACAGTCACCTCTGA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGGTGAATTACTTAGCTaGAGTGCTTTGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQGELLS*SALSLA
Trigger: TGCCAAGGACAAAGCACTTCAGCTAAGTAATTCACC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGTTTTTCCCTGGGATTaGGTGTTCTTCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTVFPWD*VFFTPT
Trigger: TGTTGGAGTGAAGAACACTCAATCCCAGGGAAAAAC...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTCATCACTGGGTGAGTaGAAGAGGTCAGAATCACTC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCSSLGE*KRSESL
Trigger: GAGTGATTCTGACCTCTTTCACTCACCCAGTGATGA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGACACATCACTGCCATaGGAAGAATGTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCDTSLP*EECRSS
Trigger: ACTGGACCGACATTCTTCTCATGGCAGTGATGTGTC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTGGAGAGGAAATGGCTaGTGTACAGTAATTAAATCC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEWRGNG*CTVIKS
Trigger: GGATTTAATTACTGTACATCAGCCATTTCCTCTCCA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAAGTGAGTCTGTTGAATaGGACAGGAATTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTSESVE*DRNFQV
Trigger: CACCTGGAAATTCCTGTCTCATTCAACAGACTCACT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTTCATCCTCATGATTaGCTTGCTATCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILHPHD*LAICLC
Trigger: ACAAAGACAGATAGCAAGTCAATCATGAGGATGAAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTGTGGATGGGAAACCTaGCACAGGTCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNCGWET*HRSRSV
Trigger: GACAGAACGGGACCTGTGTCAGGTTTCCCATCCACA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCCCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGCCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTTCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFSKDTE*TVLAAT
Trigger: AGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGA...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGTCTGTTTCTGAAGGGTaGGTATTCTCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRSVSEG*VFSMTE
Trigger: TTCTGTCATGGAGAATACTCACCCTTCAGAAACAGA...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTAACAACCAAAGCAGATaGAACATCACAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGNNQSR*NITAGR
Trigger: CCGCCCAGCTGTGATGTTTCATCTGCTTTGGTTGTT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCACGACAACGACTGAGATaGCTGGAATTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSRQRLR*LELRED
Trigger: GTCTTCTCTCAATTCCAGTCATCTCAGTCGTTGTCG...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCGACAACGACTGAGATaGCTGGAATTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCRQRLR*LELRED
Trigger: GTCTTCTCTCAATTCCAGTCATCTCAGTCGTTGTCG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAATGAAGCCAACCGATaGGAGCATTTAAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCNEANR*EHLKCT
Trigger: TGTGCACTTTAAATGCTCTCATCGGTTGGCTTCATT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGGAAGGTGACGTGCCACTCTCCTTGGGTAATCCCTAGGGTCATTTCGCTGCAAGAGAGAAAGAGGAAGTaGTATGTCCAAAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RKVTCHSPWVIPRVISLQERKRK*YVQSFR
Trigger: TCTGAAACTTTGGACATATCACTTCCTCTTTCTCTC...TTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACTGCCTGGACTGTTTaGCAGAGAGAAAGTACTGTC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCTAWTV*QRESTV
Trigger: GACAGTACTTTCTCTCTGGCAAACAGTCCAGGCAGT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACGGTACAGCTGTGGTCTaGTCCCTCCAGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNGTAVV*SLQLPF
Trigger: AAAGGGAAGCTGGAGGGAGCAGACCACAGCTGTACC...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATCCAGCAAAACATCCTaGAAGGCTCCCCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTSSKTS*KAPRGF
Trigger: GAAGCCACGGGGAGCCTTGCAGGATGTTTTGCTGGA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAGCCAGAAGAGATGCTaGATCAGGGCATGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFSQKRC*IRAWLY
Trigger: ATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTCACATTCTGGGCTCTaGTTGGAAGCCAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWSHSGL*LEARRD
Trigger: ATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGTGA...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATTGAGGTACACTCTCTaGCCAGTCCAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTLRYTL*PVQHPG
Trigger: TCCTGGATGTTGGACTGGGCAGAGAGTGTACCTCAA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTGTGGACAAAAGCACTaGAATTTGCACAAGTATAGG +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSCGQKH*NLHKYR
Trigger: CCTATACTTGTGCAAATTGCAGTGCTTTTGTCCACA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTCATATATTACTTCTTaGCGTTTGACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLSYITS*RLTTSF
Trigger: GAAAGATGTGGTCAAACGGCAAGAAGTAATATATGA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTTTCAACCTTCCTGCTaGATTCTTCAGAAACACACT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEFQPSC*ILQKHT
Trigger: AGTGTGTTTCTGAAGAATGCAGCAGGAAGGTTGAAA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGATAAATATCTCCATCTaGAAGGCCAGCTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEINISI*KASLQF
Trigger: GAATTGCAAGCTGGCCTTGCAGATGGAGATATTTAT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCCAAAACGCAGAGGGTaGACATCGTTCTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYPKRRG*TSFCSV
Trigger: GACACTGCAGAACGATGTGCACCCTCTGCGTTTTGG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACGGGAAGGCCCTCTTTaGAAGCACAGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSREGPL*KHRAAP
Trigger: AGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGATATATTCTCTCTTCTaGGCTCAGCCATACCTTGTA +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEIYSLF*AQPYLV
Trigger: TACAAGGTATGGCTGAGCCCAGAAGAGAGAATATAT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGAATCAGGATGTCTTaGGTGTTGTGTGATATATTC +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSGIRMS*VLCDIF
Trigger: GAATATATCACACAACACCCAAGACATCCTGATTCC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGCTCAACAAGACGTTTaGAATCAGGATGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQAQQDV*NQDVLG
Trigger: ACCCAAGACATCCTGATTCCAAACGTCTTGTTGAGC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGCTTCATCGTCTATTTaGGCTTCCTCAGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYASSSI*ASSASP
Trigger: GGGTGACGCTGAGGAAGCCCAAATAGACGATGAAGC...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTCTCCTCCACGTCGCCTaGGTCAGCAGGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCLLHVA*VSRLTL
Trigger: GAGAGTGAGCCTGCTGACCCAGGCGACGTGGAGGAG...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCAGCTCATACTCCGGTaGTTCATTTCTGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGQLILR*FISASL
Trigger: CAGCGATGCAGAAATGAACCACCGGAGTATGAGCTG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361243.6
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTGTCCAATCCAGGATaGCTGATTGTCATTAATGAG +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLSNPG*LIVINE
Trigger: CTCATTAATGACAATCAGCCATCCTGGATTGGACAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCTCTATTGGCAAATATTaGGGTGGTAGCGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVSIGKY*GGSGFI
Trigger: GATGAAACCGCTACCACCCCAATATTTGCCAATAGA...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACACTGCTTCCAGCTGTTTaGACTCAATCTCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTLLPAV*TQSQSL
Trigger: GAGACTTTGAGATTGAGTCCAAACAGCTGGAAGCAG...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGTGGAAGAATTGGCTATaGATACTGATCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWWKNWL*ILISSS
Trigger: GGATGAGCTGATCAGTATCCATAGCCAATTCTTCCA...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGACCCTGATTTGGCTATaGAAGGTGCAGATGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRTLIWL*KVQMAR
Trigger: CCTCGCCATCTGCACCTTCCATAGCCAAATCAGGGT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGTTCAGACCTTACTTaGATACACTCTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWGSDLT*IHSFSL
Trigger: AAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTGGCCCCTTCTGAGTaGTCAGTGACAATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLVAPSE*SVTIKR
Trigger: CCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTCTCCAGATCTGCACTaGCAGGAACTGCTACACATG +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCSPDLH*QELLHM
Trigger: CATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNPAHTS*GKPQVN
Trigger: GTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGTGGACAGCAACTTCTaGATCAAGTTCTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWVDSNF*IKFWPL
Trigger: TAGAGGCCAGAACTTGATCCAGAAGTTGCTGTCCAC...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTACCAGGCACGCCCCATaGCCTGTGCTCATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCTRHAP*PVLMPS
Trigger: TGAGGGCATGAGCACAGGCCATGGGGCGTGCCTGGT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAATGCACCTGACAGTATaGGACACCGTTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGMHLTV*DTVLTA
Trigger: AGCCGTCAGAACGGTGTCCCATACTGTCAGGTGCAT...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAAGCAGCAGGGTGTGGTaGCATGTGCCTGTATTCCCA +
Preference number: 4 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQSSRVW*HVPVFP
Trigger: TGGGAATACAGGCACATGCCACCACACCCTGCTGCT...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGCATCATGCAAACTCTaGTCTGTCCCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTASCKL*SVPNTF
Trigger: GAATGTATTGGGGACAGATCAGAGTTTGCATGATGC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTATGTCCAACTCTCGATaGTGCCTCACAGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFMSNSR*CLTEQS
Trigger: AGACTGTTCTGTGAGGCATCATCGAGAGTTGGACAT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATGGCATCTGGGTTCATaGGCCCATGTTCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTWHLGS*AHVPFP
Trigger: GGGAAATGGAACATGGGCTCATGAACCCAGATGCCA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGATTACTAAATGCAAGTaGAGACTCAGCAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEITKCK*RLSRFV
Trigger: AACAAACCTGCTGAGTCTTCACTTGCATTTAGTAAT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACTTCTCGCCTCCTTTTaGAGCATTCATCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTLLASF*SIHLMA
Trigger: AGCCATCAGATGAATGCTTCAAAAGGAGGCGAGAAG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGCCTTTAGGAATTCCTaGCGTGTCCAAAACCATCAC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCAFRNS*RVQNHH
Trigger: GTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAGAATGGGAGGTCTCCTaGCAACATCCCCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTEWEVS*QHPQEL
Trigger: GAGTTCTTGGGGATGTTGTCAGGAGACCTCCCATTC...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTCAAGCCTTCTAGACTaGAACTTCTCCTATGAATGG +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEASSLLD*NFSYEW
Trigger: CCATTCATAGGAGAAGTTTCAGTCTAGAAGGCTTGA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCCTGCTACTCTCCTCATaGAGAGCATGTCACTTTCTA +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPLLLSS*RACHFL
Trigger: TAGAAAGTGACATGCTCTTCATGAGGAGAGTAGCAG...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGACACCTGTGGGGAGAGTaGCTTGTGGTCTGCTTACCC +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRHLWGE*LVVCLP
Trigger: GGGTAAGCAGACCACAAGTCACTCTCCCCACAGGTG...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCTTGGAAGCACAGAGCTaGACCTTCACTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPLEAQS*TFTVSQ
Trigger: TTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAA...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCTGGGCAGCACTGAGTaGTCTCAGTCTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPLGSTE*SQSLQK
Trigger: CTTCTGAAGAGACTGAGAGCACTCAGTGCTGCCCAG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTTGACATGCAGAGTCTaGACAAAGTTTATCGTCTCC +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALTCRV*TKFIVS
Trigger: GGAGACGATAAACTTTGTGCAGACTCTGCATGTCAA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTTGAGGTACACTCTCTaGCCAGTCCAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRLRYTL*PVQHPG
Trigger: TCCTGGATGTTGGACTGGGCAGAGAGTGTACCTCAA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCTCATATATTACTTCTTaGCGTTTGACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFSYITS*RLTTSF
Trigger: GAAAGATGTGGTCAAACGGCAAGAAGTAATATATGA...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGACCTTTCTCCTCATGTaGCACTTCTCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWTFLLM*HFSHNQ
Trigger: CTGATTGTGAGAGAAGTGGCACATGAGGAGAAAGGT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACCGAGATCGAGGTGGTaGACATCACGTCTTTTATAC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTPRSRW*TSRLLY
Trigger: GTATAAAAGACGTGATGTGCACCACCTCGATCTCGG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTACCATGAACTGTCCTaGACACACCAGCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRYHELS*THQLGK
Trigger: TTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCCATGACCAGGAGCAATaGTCTCCAATGTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPHDQEQ*SPMYQN
Trigger: GTTCTGATACATTGGAGACCATTGCTCCTGGTCATG...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAATCTGATATTACTGCCTaGTCTGGCACCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKSDITA*SGTSSF
Trigger: GAAAGAACTGGTGCCAGACCAGGCAGTAATATCAGA...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCAAGAGGTATCATCTCTaGGGTTCCAACTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIKRYHL*GSNSLW
Trigger: CCACAGGGAGTTGGAACCCCAGAGATGATACCTCTT...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTTTCCCTCACACCAGCTaGGGCCCCATCATCATGGGC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCFPHTS*GPIIMG
Trigger: GCCCATGATGATGGGGCCCCAGCTGGTGTGAGGGAA...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTTGCTGCATCAGGGCATaGCTCTATTGTACACCAGTT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFCCIRA*LYCTPV
Trigger: AACTGGTGTACAATAGAGCCATGCCCTGATGCAGCA...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTTGTCATTAATGAGATaGATTTTGTCAATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRLSLMR*ILSMER
Trigger: CCTCTCCATTGACAAAATCCATCTCATTAATGACAA...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCTTGTCCAATCCAGGATaGCTGATTGTCATTAATGAG +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVLSNPG*LIVINE
Trigger: CTCATTAATGACAATCAGCCATCCTGGATTGGACAA...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGAAGGGCTTCATACACTaGCTACAGCTGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQKGFIH*LQLMGP
Trigger: GGGTCCCATCAGCTGTAGCCAGTGTATGAAGCCCTT...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGTATGGAGACACTTTTaGAGAGCGAGACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFVWRHF*RARHSA
Trigger: AGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATAC...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCACTTCATTGTCTTTaGTACACTGCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIPLHCL*YTAIFF
Trigger: AAAGAATATTGCAGTGTACCAAAGACAATGAAGTGG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGACTTCTACCATCTCTaGATCTGTCATCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLDFYHL*ICHPHA
Trigger: AGCATGGGGATGACAGATCCAGAGATGGTAGAAGTC...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGTCTTTGGAGCTGGCATaGACTTCTACCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLSLELA*TSTISG
Trigger: TCCAGAGATGGTAGAAGTCCATGCCAGCTCCAAAGA...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGTTCTCCTAAGATCTTaGCCATCATCTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCVLLRS*PSSPSS
Trigger: GGAAGAGGGAGATGATGGCCAAGATCTTAGGAGAAC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAGTTCTCCTAAGATCTTaGCCATCATCTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTVLLRS*PSSPSS
Trigger: GGAAGAGGGAGATGATGGCCAAGATCTTAGGAGAAC...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACGCTCCAGGTCATACTaGTATGTGCCCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTRSRSY*YVPFFC
Trigger: GCAGAAGAAGGGCACATACCAGTATGACCTGGAGCG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAACACCGAGATCGAGGTaGTGCACATCACGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTTPRSR*CTSRLL
Trigger: TAAAAGACGTGATGTGCACCACCTCGATCTCGGTGT...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACAGGAACTGCTACACATaGCTTCACCCTTCGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYRNCYT*LHPSPE
Trigger: TTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTGCAGACTGTATTCCTaGATGAAGTTGGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWCRLYS*MKLGGL
Trigger: CAAACCACCCAACTTCATCCAGGAATACAGTCTGCA...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGGGCGTGGAAACAGTATaGGGAATTCAGTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRGVETV*GIQSES
Trigger: TGACTCGGACTGAATTCCCCATACTGTTTCCACGCC...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCATGGTGTCCCGGCGTaGAAACAGTATGGGGAATTC +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRHGVPA*KQYGEF
Trigger: GAATTCCCCATACTGTTTCCACGCCGGGACACCATG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCAAGCTCACTCGATTCTaGAAATCTGGGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIKLTRF*KSGGSG
Trigger: TCCAGAGCCCCCAGATTTCCAGAATCGAGTGAGCTT...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACAAGCTCACTCGATTCTaGAAATCTGGGGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYKLTRF*KSGGSG
Trigger: TCCAGAGCCCCCAGATTTCCAGAATCGAGTGAGCTT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTTGGAGAAGTAATTCATaGCCTATCAATCTTTTGACA +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTWRSNS*PINLLT
Trigger: TGTCAAAAGATTGATAGGCCATGAATTACTTCTCCA...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAAAAAGCAGCAGGGTGTaGTGGCATGTGCCTGTATTC +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGKSSRV*WHVPVF
Trigger: GAATACAGGCACATGCCACCACACCCTGCTGCTTTT...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 72 bp CCCACATCAAGAAACAACGCCAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTGAGGCCTCAGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PTSRNNAKGLKT*CSRLILRPQEG
Trigger: ACCTTCCTGAGGCCTCAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTTGGCGTTGTTTCTTGATGTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAGTTTCACAACAATCATaGCCAGGAGCAATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGVSQQS*PGAMVS
Trigger: GGAGACCATTGCTCCTGGTCATGATTGTTGTGAAAC...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTCATCCTGGACGAAATaGAAGTCTTCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSASSWTK*KSSSAT
Trigger: GGTGGCTGAAGAAGACTTTCATTTCGTCCAGGATGA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCTGGTTGCTAGGAATTaGGCTGCATCATACGCTTCA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSALVARN*AASYAS
Trigger: TGAAGCGTATGATGCAGCTCAATTCCTAGCAACCAG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGAGCAGCTTCAGGTGCCTaGATGCCAGCACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRAASGA*MPAPTS
Trigger: AGAAGTTGGTGCTGGCATTCAGGCACCTGAAGCTGC...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACTCCTCAACTATGCTTaGCAAATCACAGGGACTTTC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTLLNYA*QITGTF
Trigger: GAAAGTCCCTGTGATTTGTCAAGCATAGTTGAGGAG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGACTGACATTTGTTGTTaGAATGCCTCCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLTDICC*NASQFT
Trigger: GGTGAACTGGGAGGCATTTCAACAACAAATGTCAGT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACAGTGTCTGGGGTACTaGCATTTGTTGTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTQCLGY*HLLLKC
Trigger: GCATTTCAACAACAAATGTCAGTACCCCAGACACTG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGATCACCACAGAATTCTaGTCTACTGGAGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLITTEF*STGASA
Trigger: TGCTGATGCTCCAGTAGATCAGAATTCTGTGGTGAT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATCCAGAGGAGAAGGCTaGCTGCAGTTAAGAGCATCG +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLSRGEG*LQLRAS
Trigger: CGATGCTCTTAACTGCAGTCAGCCTTCTCCTCTGGA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGCATGTCATCACTGGGTaGGTGAAAGAGGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYEHVITG*VKEVRI
Trigger: GATTCTGACCTCTTTCACTCACCCAGTGATGACATG...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATTGCAGGCACTTCAGTaGTACTGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTLQALQ*YCPSPP
Trigger: AGGAGGAGATGGACAGTATCACTGAAGTGCCTGCAA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCAGGCATCTTTGTTGGTaGAGGGCTTCATACACTGGC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPRHLCW*RASYTG
Trigger: GCCAGTGTATGAAGCCCTTCACCAACAAAGATGCCT...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTATTGGCTATGGATACTaGTCAGCTCATCCAAACAGG +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCIGYGY*SAHPNR
Trigger: CCTGTTTGGATGAGCTGATCAGTATCCATAGCCAAT...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACACTCTTCATCCTCATaGTTGACTTGCTATCTGTCT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTHSSSS*LTCYLS
Trigger: AGACAGATAGCAAGTCAATCATGAGGATGAAGAGTG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAATTTGAAGCATTCATCTaGTGGCTGTCAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKFEAFI*WLSNPP
Trigger: TGGAGGATTTGACAGCCATCAGATGAATGCTTCAAA...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGCTTCTCGCCTCCTTTTaGAGCATTCATCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYELLASF*SIHLMA
Trigger: AGCCATCAGATGAATGCTTCAAAAGGAGGCGAGAAG...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGCCTTTAGGAATTCCTaGCGTGTCCAAAACCATCAC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYAFRNS*RVQNHH
Trigger: GTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGC...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCTCCACGGTGTTTTTGTaGAGAGCACGTACGCAAGTA +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVISTVFL*RARTQV
Trigger: TACTTGCGTACGTGCTCTTCACAAAAACACCGTGGA...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTGCACTGTCAAGGCCATaGGCAAAAGCACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCALSRP*AKAQAA
Trigger: GGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGC...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCATATGGGACACCGTTCTaGCGGCTGACCACAGGTTTA +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSYGTPF*RLTTGL
Trigger: TAAACCTGTGGTCAGCCGTCAGAACGGTGTCCCATA...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCTTCAGGTGCCTGAATaGCAGCACCAACTTCTTATC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSALQVPE*QHQLLI
Trigger: GATAAGAAGTTGGTGCTGGCATTCAGGCACCTGAAG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAGCCGCACAGCAAAATaGATCAATGTCTCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLSRTAK*INVSRG
Trigger: CCCGCGAGAGACATTGATGCATTTTGCTGTGCGGCT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGACGAAAGGCCTTCCGTaGCCTTTACTCCACAATCAG +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRTKGLP*PLLHNQ
Trigger: CTGATTGTGGAGTAAAGGGCACGGAAGGCCTTTCGT...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTTGAGGTACACTCTCTaGCCAGTCCAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNLRYTL*PVQHPG
Trigger: TCCTGGATGTTGGACTGGGCAGAGAGTGTACCTCAA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACATTTCAACCTTCCTGCTaGATTCTTCAGAAACACACT +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTFQPSC*ILQKHT
Trigger: AGTGTGTTTCTGAAGAATGCAGCAGGAAGGTTGAAA...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGTTACAAGGAGAAGAATaGAGGTTCAGTACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLLQGEE*RFSTAL
Trigger: GAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAA...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGAAGCGGTTCTGTTGCTaGACTGCAGACTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRKRFCC*TADCIP
Trigger: AGGAATACAGTCTGCAGTGCAGCAACAGAACCGCTT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGGGGACTCCTGGTCTGTaGGCATTCCAGAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRGTPGL*AFQKIL
Trigger: CAAAATCTTCTGGAATGCCCACAGACCAGGAGTCCC...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTTCCCCTGCAGTGTCTaGGGTACTGACATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAFPCSV*GTDICC
Trigger: ACAACAAATGTCAGTACCCCAGACACTGCAGGGGAA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAGTCTTTTGCAGCAGCTaGAATCACCACAGAATTCTG +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTVFCSS*NHHRIL
Trigger: CAGAATTCTGTGGTGATTCCAGCTGCTGCAAAAGAC...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTATTACTGCCTGGTCTaGCACCAGTTCTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCYYCLV*HQFFLH
Trigger: ATGGAGAAAGAACTGGTGCCAGACCAGGCAGTAATA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTGGGGCCCCATCATCATaGGCTGAGAGCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCGAPSS*AESSMS
Trigger: AGACATGGAGCTCTCAGCCCATGATGATGGGGCCCC...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACATCCACTATACGGCTaGCAGCCTCCTCTATCAAGT +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTHPLYG*QPPLSS
Trigger: ACTTGATAGAGGAGGCTGCCAGCCGTATAGTGGATG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTTGTCATTAATGAGATaGATTTTGTCAATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSELSLMR*ILSMER
Trigger: CCTCTCCATTGACAAAATCCATCTCATTAATGACAA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACATTGTCCAATCCAGGATaGCTGATTGTCATTAATGAG +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTLSNPG*LIVINE
Trigger: CTCATTAATGACAATCAGCCATCCTGGATTGGACAA...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTTGTGGAAGGTACTGTaGAAGGGCCGTGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNLWKVL*KGRELS
Trigger: GGACAATTCACGGCCCTTCCACAGTACCTTCCACAA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCTTGGAGGGGCTATGTaGCAGGAAATTATAGTTCTC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFLGGAM*QEIIVL
Trigger: GAGAACTATAATTTCCTGCCACATAGCCCCTCCAAG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACAGCGAGACACTCTGCTaGGATCGTCTATTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYSETLC*DRLLAN
Trigger: ATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGTTCCTCTTTGGAGCTaGCATGGACTTCTACCATCT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYVPLWS*HGLLPS
Trigger: AGATGGTAGAAGTCCATGCCAGCTCCAAAGAGGAAC...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCATCAGCTTGGTATGTaGATGGGAAACCTGACACAG +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYHQLGM*MGNLTQ
Trigger: CTGTGTCAGGTTTCCCATCCACATACCAAGCTGATG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCATCAGCTTGGTATGTaGATGGGAAACCTGACACAG +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIHQLGM*MGNLTQ
Trigger: CTGTGTCAGGTTTCCCATCCACATACCAAGCTGATG...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGGATCCTCATCAGCTTaGTATGTGGATGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAGSSSA*YVDGKP
Trigger: AGGTTTCCCATCCACATACCAAGCTGATGAGGATCC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCCAATGACCCTGATTTaGCTATGGAAGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAPMTLI*LWKVQM
Trigger: CATCTGCACCTTCCATAGCCAAATCAGGGTCATTGG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCTCGATTCTGGAAATCTaGGGGCTCTGGATAGGAACT +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVISILEI*GLWIGT
Trigger: AGTTCCTATCCAGAGCCCCCAGATTTCCAGAATCGA...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGATGGCTCAGGCCCCTCTaGGTATTTCTCCTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRWLRPL*VFLLRN
Trigger: GTTCCTGAGGAGAAATACCCAGAGGGGCCTGAGCCA...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAGTATTCCCAGCTACTTaGGAGGCTAAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQVFPAT*EAKAGE
Trigger: TTCTCCTGCCTTAGCCTCCCAAGTAGCTGGGAATAC...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCCAATGTATCAGAACTaGCCTTCCGAGTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYPMYQN*PSEYLY
Trigger: GTACAAGTACTCGGAAGGTCAGTTCTGATACATTGG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTGTTTCACAACAATCATaGCCAGGAGCAATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIVSQQS*PGAMVS
Trigger: GGAGACCATTGCTCCTGGTCATGATTGTTGTGAAAC...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATCATCCTGGACGAAATaGAAGTCTTCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQSSWTK*KSSSAT
Trigger: GGTGGCTGAAGAAGACTTTCATTTCGTCCAGGATGA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCGTCACTGTGTTCTGTTaGCATGCAGAGTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPVTVFC*HAESAQ
Trigger: TTGTGCAGACTCTGCATGTCAACAGAACACAGTGAC...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTAACTGGATGTGGATGTaGAACCACCTCAAGCATATT +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGNWMWM*NHLKHI
Trigger: AATATGCTTGAGGTGGTTTCACATCCACATCCAGTT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTAGAGAAAGTACTGTCTaGTATTACTGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSARESTV*YYCLVW
Trigger: CCAGACCAGGCAGTAATATCAGACAGTACTTTCTCT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGGTCATCCTTGGTTACTaGTTCACTGCCTGGACTGTT +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRVILGY*FTAWTV
Trigger: AACAGTCCAGGCAGTGAATCAGTAACCAAGGATGAC...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCATGTCATCACTGGGTaGGTGAAAGAGGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPHVITG*VKEVRI
Trigger: GATTCTGACCTCTTTCACTCACCCAGTGATGACATG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCCAATCCAGGATGGCTaGTTGTCATTAATGAGATGG +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYPIQDG*LSLMRW
Trigger: CCATCTCATTAATGACAATCAGCCATCCTGGATTGG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACACTCTTCATCCTCATaGTTGACTTGCTATCTGTCT +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTHSSSS*LTCYLS
Trigger: AGACAGATAGCAAGTCAATCATGAGGATGAAGAGTG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGTCCTTGGCAAACATCTaGCCACTCTTCATCCTCATG +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQSLANI*PLFILM
Trigger: CATGAGGATGAAGAGTGGTCAGATGTTTGCCAAGGA...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCTGTCATCCCCATGCTaGTCAGGAATAAACCTTTCT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSALSSPC*SGINLS
Trigger: AGAAAGGTTTATTCCTGATCAGCATGGGGATGACAG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATTTGAAGCATTCATCTaGTGGCTGTCAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTFEAFI*WLSNPP
Trigger: TGGAGGATTTGACAGCCATCAGATGAATGCTTCAAA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGCTTCTGAGTGGTCAGTaGCAATCAAAAGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQLLSGQ*QSKGVT
Trigger: CGTGACACCTTTTGATTGTCACTGACCACTCAGAAG...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTTTTGCAAACAAGCAATaGGAGCAGAGGTATCCGGTG +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIFANKQ*EQRYPV
Trigger: CACCGGATACCTCTGCTCTCATTGCTTGTTTGCAAA...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGATCGTTCAATTGGACTTaGACTCAGAAGGGAAACTGG +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGSFNWT*TQKGNW
Trigger: CCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGA...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTACATTGCCTCACCTATaGCTGCTGCTAAGAGAGTAT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSATLPHL*LLLREY
Trigger: ATACTCTCTTAGCAGCAGGCATAGGTGAGGCAATGT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAAATGGGTGAGGATTTaGCCTTTTGGCTTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFKWVRI*PFGFEH
Trigger: ATGCTCAAAGCCAAAAGGGCAAATCCTCACCCATTT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATGGTTACTGATTCACTaGCTGGACTGTTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTWLLIH*LDCLPE
Trigger: CTCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCTCACATTCTGGGCTCTaGTTGGAAGCCAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPSHSGL*LEARRD
Trigger: ATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGTGA...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGATGGAACTGAAAGTGTaGCCGTTGACAGTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLMELKV*PLTVFL
Trigger: TAAGAAGACTGTCAACGGGCACACTTTCAGTTCCAT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTATGGAACTGAAAGTGTaGCCGTTGACAGTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGMELKV*PLTVFL
Trigger: TAAGAAGACTGTCAACGGGCACACTTTCAGTTCCAT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTTGTGTGTCCGAGAGATaGTGTTCCTTTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGICVSER*CSFLGT
Trigger: TGTCCCCAAAAAGGAACAGCATCTCTCGGACACACA...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGGGTAAGCGGTTCTGTTaGTGCACTGCAGACTGTATT +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRGKRFC*CTADCI
Trigger: AATACAGTCTGCAGTGCAGCAACAGAACCGCTTACC...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTCTGATATTACTGCCTaGTCTGGCACCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRSDITA*SGTSSF
Trigger: GAAAGAACTGGTGCCAGACCAGGCAGTAATATCAGA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTATCCTATGTTCTCTCTaGTCTGACTCCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAILCSL*SDSRSS
Trigger: AGAGGATCTGGAGTCAGACCAGAGAGAACATAGGAT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGCTTGGAGGGGCTATGTaGCAGGAAATTATAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRLGGAM*QEIIVL
Trigger: GAGAACTATAATTTCCTGCCACATAGCCCCTCCAAG...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGTCTCGGCAGCCTTTGTaGACAAAAGCACTGCAATTT +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYESRQPL*TKALQF
Trigger: AAATTGCAGTGCTTTTGTCCACAAAGGCTGCCGAGA...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGCTGCTTCCAGCTGTTTaGACTCAATCTCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRLLPAV*TQSQSL
Trigger: GAGACTTTGAGATTGAGTCCAAACAGCTGGAAGCAG...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAAAGCAATATGCACTCTaGAATTCCAAGCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSKQYAL*NSKPSN
Trigger: GTTAGAAGGCTTGGAATTCCAGAGTGCATATTGCTT...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTCCAATGACCCTGATTTaGCTATGGAAGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIPMTLI*LWKVQM
Trigger: CATCTGCACCTTCCATAGCCAAATCAGGGTCATTGG...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGACACCGAGATCGAGGTaGTGCACATCACGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRTPRSR*CTSRLL
Trigger: TAAAAGACGTGATGTGCACCACCTCGATCTCGGTGT...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAGAAATCTGGGGGCTCTaGATAGGAACTCCATCTTTC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTEIWGL*IGTPSF
Trigger: GAAAGATGGAGTTCCTATCCAGAGCCCCCAGATTTC...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTATCCTTGGGAAGACCTaGCTACAGAAAAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIILGKT*LQKKSP
Trigger: AGGGCTCTTTTTCTGTAGCCAGGTCTTCCCAAGGAT...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGAAGCCAGTATGTTGTaGCAAAATTCGAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWEASML*QNSRKH
Trigger: GTGTTTTCTCGAATTTTGCCACAACATACTGGCTTC...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCACGAGTACTTGTACAGTaGCGGAGGGTGGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPRVLVQ*RRVEPK
Trigger: TTTGGGTTCCACCCTCCGTCACTGTACAAGTACTCG...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACAACTGGATGTGGATGTaGAACCACCTCAAGCATATT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYNWMWM*NHLKHI
Trigger: AATATGCTTGAGGTGGTTTCACATCCACATCCAGTT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGGTCTTGGGTGTTGTGTaGTATATTCTCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQVLGVV*YILSSG
Trigger: CCCAGAAGAGAGAATATATCACACAACACCCAAGAC...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAAGTACACCTTGTTTTaGGGTACACTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLKYTLF*GTLSAQ
Trigger: CTGGGCAGAGAGTGTACCTCAAAACAAGGTGTACTT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCAGTGAGTCTGTTGAATaGGACAGGAATTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPSESVE*DRNFQV
Trigger: CACCTGGAAATTCCTGTCTCATTCAACAGACTCACT...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAAGTGAGTCTGTTGAATaGGACAGGAATTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTSESVE*DRNFQV
Trigger: CACCTGGAAATTCCTGTCTCATTCAACAGACTCACT...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCTGCATTCTCACCTaGAAACTGATTTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGFCILT*KLIYKH
Trigger: GTGCTTGTAAATCAGTTTTCAGGTGAGAATGCAGAA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTTGGCATAAAGGTCTTTaGAGTAGTTTACAGACTGGT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFWHKGL*SSLQTG
Trigger: ACCAGTCTGTAAACTACTTCAAAGACCTTTATGCCA...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGAAGCCTTCTAACAACTaGACTGCTCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLKPSNN*TAHLLL
Trigger: AAGAAGAAGATGAGCAGTTCAGTTGTTAGAAGGCTT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAAGCCTTCTAACAACTaGACTGCTCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFKPSNN*TAHLLL
Trigger: AAGAAGAAGATGAGCAGTTCAGTTGTTAGAAGGCTT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGCTGTCATCCCCATGCTaGTCAGGAATAAACCTTTCT +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQLSSPC*SGINLS
Trigger: AGAAAGGTTTATTCCTGATCAGCATGGGGATGACAG...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATGTCCAACCAGAACCTaGCCAAATCGTTTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLCPTRT*PNRFEW
Trigger: CCACTCAAAACGATTTGGTCAGGTTCTGGTTGGACA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGGTGATTTCTTTAGCTTaGTGGAGAACATGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRVISLA*WRTWCP
Trigger: GGGACACCATGTTCTCCATCAAGCTAAAGAAATCAC...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCATACAGGGCAATGGTGTaGCTGACCAGCTCTTTCATT +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSYRAMV*LTSSFI
Trigger: AATGAAAGAGCTGGTCAGTCACACCATTGCCCTGTA...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACAAATGGGTGAGGATTTaGCCTTTTGGCTTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYKWVRI*PFGFEH
Trigger: ATGCTCAAAGCCAAAAGGGCAAATCCTCACCCATTT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATGTGGACAAAAGCACTaGAATTTGCACAAGTATAGG +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTCGQKH*NLHKYR
Trigger: CCTATACTTGTGCAAATTGCAGTGCTTTTGTCCACA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTTTTCTACCATCTGCTaGTCAAAAAGCAGATCCGCC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNFSTIC*SKSRSA
Trigger: GGCGGATCTGCTTTTTGAGCAGCAGATGGTAGAAAA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGCATAACTTGCCACTTTaGTGTCTACAGCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRHNLPL*CLQLQS
Trigger: TGATTGGAGCTGTAGACAGCAAAGTGGCAAGTTATG...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGTCAGTGAGAAGAACTaGTTGAACCTCTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIVSEKN*LNLFQP
Trigger: AGGTTGAAAGAGGTTCAAGCAGTTCTTCTCACTGAC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTACACAGAGTGAACAGTaGTGGCTGCCACTTCACTCG +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCTQSEQ*WLPLHS
Trigger: CGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCSSVAT*SNFSIH
Trigger: GTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAAGCGGTTCTGTTGCTaGACTGCAGACTGTATTCCT +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLKRFCC*TADCIP
Trigger: AGGAATACAGTCTGCAGTGCAGCAACAGAACCGCTT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTAGTTCAACCCTTGCATaGACTAACACCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCSSTLA*TNTSPP
Trigger: GGGAGGGGAGGTGTTAGTGCATGCAAGGGTTGAACT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCACACAGGAAGGTGACGTaGCACTCTCCTTGGGTAATC +
Preference number: 4 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPHRKVT*HSPWVI
Trigger: GATTACCCAAGGAGAGTGGCACGTCACCTTCCTGTG...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCTATGTTCTTCATCTTTaGCAGCACTTGGTATTCTTC +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPYVLHL*QHLVFF
Trigger: GAAGAATACCAAGTGCTGGCAAAGATGAAGAACATA...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGTACAGTGACGGAGGGTaGAACCCAAAAATACCAAGT +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRYSDGG*NPKIPS
Trigger: ACTTGGTATTTTTGGGTTCCACCCTCCGTCACTGTA...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCATGACCAGGAGCAATaGTCTCCAATGTATCAGAAC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNHDQEQ*SPMYQN
Trigger: GTTCTGATACATTGGAGACCATTGCTCCTGGTCATG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAGATGGGGGTCCTGACTaGTCAAGAAAACGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SNLVWPLLALLEQFCATEDGGPD*SRKRVK
Trigger: CTTTACCCGTTTTCTTGACCAGTCAGGACCCCCATC...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTCCCATCAGACCCATCTaGCAACAGACATGGCAACAG +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCPIRPI*QQTWQQ
Trigger: CTGTTGCCATGTCTGTTGCCAGATGGGTCTGATGGG...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTGCTGGCTCAGGCCCCTaGACAGGTAAAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCAGSGP*TGKMIF
Trigger: GAAGATCATTTTACCTGTCCAGGGGCCTGAGCCAGC...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCAAATGCTCTTCCTCTaGCTTTGGGAAGATGATGCT +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPQMLFL*LWEDDA
Trigger: AGCATCATCTTCCCAAAGCCAGAGGAAGAGCATTTG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCCACTGCAATATTCTTTaGAATAAAACTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAHCNIL*NKTGYL
Trigger: CAAGTACCCAGTTTTATTCCAAAGAATATTGCAGTG...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATCTTTGGAGCTGGCATaGACTTCTACCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLSLELA*TSTISG
Trigger: TCCAGAGATGGTAGAAGTCCATGCCAGCTCCAAAGA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAATTAATTCTCGGGCTCTaGTGTCCAACATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKLILGL*CPTFSF
Trigger: AAAAGAAAATGTTGGACACCAGAGCCCGAGAATTAA...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTGGTCCTTTGTTTGTCTaGCTGGTTGAACTCAGTATG +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIGPLFV*LVELSM
Trigger: CATACTGAGTTCAACCAGCCAGACAAACAAAGGACC...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGGTTTTGAGTGGGGTCTaGGCAGATGTGAAATCTCTA +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQVLSGV*ADVKSL
Trigger: TAGAGATTTCACATCTGCCCAGACCCCACTCAAAAC...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTCATGGTGTCCCGGCGTaGAAACAGTATGGGGAATTC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCHGVPA*KQYGEF
Trigger: GAATTCCCCATACTGTTTCCACGCCGGGACACCATG...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAATAAACACCCAAAAGTaGGATTACTGGGTCATACGC +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGINTQK*DYWVIR
Trigger: GCGTATGACCCAGTAATCCCACTTTTGGGTGTTTAT...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATTCCTGCAAAGTTCCTaGAGAGAGAGCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTFLQSS*RESIFL
Trigger: AAGGAAAATGCTCTCTCTTCAGGAACTTTGCAGGAA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGTGGAGAGGAAATGGCTaGTGTACAGTAATTAAATCC +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYEWRGNG*CTVIKS
Trigger: GGATTTAATTACTGTACATCAGCCATTTCCTCTCCA...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTGGAGAGGAAATGGCTaGTGTACAGTAATTAAATCC +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRWRGNG*CTVIKS
Trigger: GGATTTAATTACTGTACATCAGCCATTTCCTCTCCA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGCTTCATCCTCATGATTaGCTTGCTATCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYELHPHD*LAICLC
Trigger: ACAAAGACAGATAGCAAGTCAATCATGAGGATGAAG...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCATATCCAGGTAGAATCTaGCAGTATGCACCTGACAGT +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSYPGRI*QYAPDS
Trigger: ACTGTCAGGTGCATACTGTCAGATTCTACCTGGATA...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGATTTGTTAGCACTGCTTaGGCAATTTTGTGCAACAGA +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGFVSTA*AILCNR
Trigger: TCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAA...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGAATCCATCAAGGCTTTaGCGATCTCTTGACCTGTTT +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQNPSRL*RSLDLF
Trigger: AAACAGGTCAAGAGATCGGCAAAGCCTTGATGGATT...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTTTCAACCTTCCTGCTaGATTCTTCAGAAACACACT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAFQPSC*ILQKHT
Trigger: AGTGTGTTTCTGAAGAATGCAGCAGGAAGGTTGAAA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGATTCGCTGCAACAACATaGTTAACAGCTCAATTGAAG +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGFAATT*LTAQLK
Trigger: CTTCAATTGAGCTGTTAAGCATGTTGTTGCAGCGAA...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCCACATGTCAACAGTTTaGTTCTTTTTATTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPHMSTV*FFLLLS
Trigger: ACTCAGCAATAAAAAGAAGCAAACTGTTGACATGTG...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAGAATTCTGATCTACTaGAGCATCAGCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLRILIY*SISTLL
Trigger: GAGGAGAGTGCTGATGCTCCAGTAGATCAGAATTCT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGCTCAACAAGACGTTTaGAATCAGGATGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLAQQDV*NQDVLG
Trigger: ACCCAAGACATCCTGATTCCAAACGTCTTGTTGAGC...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCTGGAAGAATTGGCTATaGATACTGATCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPWKNWL*ILISSS
Trigger: GGATGAGCTGATCAGTATCCATAGCCAATTCTTCCA...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCAAGCCTTCTCTCACTaGTTTCACAAATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIQAFSH*FHKCLS
Trigger: TGACAAACATTTGTGAAACCAGTGAGAGAAGGCTTG...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAATGGAGAAGTAATTCATaGCCTATCAATCTTTTGACA +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKWRSNS*PINLLT
Trigger: TGTCAAAAGATTGATAGGCCATGAATTACTTCTCCA...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp TTTAAACTTGTCCAACCAGAACCTGACCAAATCGTTTaGAGTGGGGTCTGGGCAGATGTGAAATCTCTATTT +
Preference number: 4 (lower is better)
Translates to: FKLVQPEPDQIV*SGVWADVKSLF
Trigger: AAATAGAGATTTCACATCTGCCCAGACCCCACTCAAAACGATTTGGTCAGGTTCTGGTTGGACAAGTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCACTGGTTGCTAGGAATTaGGCTGCATCATACGCTTCA +
Preference number: 4 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPLVARN*AASYAS
Trigger: TGAAGCGTATGATGCAGCTCAATTCCTAGCAACCAG...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCGACTGTCCATCTGCTTaGGGTTTGTTTTCATTAGTT +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPDCPSA*GLFSLV
Trigger: AACTAATGAAAACAAACCTCAAGCAGATGGACAGTC...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTGTACTTTCCCCTCCCTaGAGCACATTCTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCVLSPP*STFFQT
Trigger: TGTTTGGAAGAATGTGCTTCAGGGAGGGGAAAGTAC...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCTTCTGCATTCTCACCTaGAAACTGATTTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPFCILT*KLIYKH
Trigger: GTGCTTGTAAATCAGTTTTCAGGTGAGAATGCAGAA...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTTCATCCTCATGATTaGCTTGCTATCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTLHPHD*LAICLC
Trigger: ACAAAGACAGATAGCAAGTCAATCATGAGGATGAAG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAATACTGGCAAAGGTTaGAAGTGGCAGTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLNTGKG*KWQFAC
Trigger: ACATGCAAACTGCCACTTTCAACCTTTGCCAGTATT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGATCACCATGCAAACTCTaGTCTGTCCCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRSPCKL*SVPNTF
Trigger: GAATGTATTGGGGACAGATCAGAGTTTGCATGGTGA...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAGTCACTTTCTACACTTaGGAGATCAAATCTGAAATC +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGVTFYT*EIKSEI
Trigger: GATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGAC...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATCTGTATTCACTCAGTaGGGGAAATCTGGGTTATTT +
Preference number: 4 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQSVFTQ*GKSGLF
Trigger: AAATAACCCAGATTTCCCTCACTGAGTGAATACAGA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTACTGCCTGGACTGTTTaGCAGAGAGAAAGTACTGTC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCTAWTV*QRESTV
Trigger: GACAGTACTTTCTCTCTGGCAAACAGTCCAGGCAGT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCACAGACTGGTTATGTTaGCCACAAAACTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPTDWLC*PQNLPY
Trigger: ATATGGCAAGTTTTGTGGGCAACATAACCAGTCTGT...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGATACAGTGACGGAGGGTaGAACCCAAAAATACCAAGT +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRYSDGG*NPKIPS
Trigger: ACTTGGTATTTTTGGGTTCCACCCTCCGTCACTGTA...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTTTGTTTCTGAGTTCTaGTGTGGCATTACATCTTCT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAFVSEF*CGITSS
Trigger: AGAAGATGTAATGCCACACCAGAACTCAGAAACAAA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACATTCGAATTTCCATCTaGGCCATCTCTATAATCTGT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYIRISI*AISIIC
Trigger: ACAGATTATAGAGATGGCCCAGATGGAAATTCGAAT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAATATATTCTCTCTTCTaGGCTCAGCCATACCTTGTA +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTIYSLF*AQPYLV
Trigger: TACAAGGTATGGCTGAGCCCAGAAGAGAGAATATAT...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCACTTCATTGTCTTTaGTACACTGCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPLHCL*YTAIFF
Trigger: AAAGAATATTGCAGTGTACCAAAGACAATGAAGTGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAAAACTAACTATGCTATaGCTCAGGCCCCTCTGGGTA +
Preference number: 4 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPKLTML*LRPLWV
Trigger: TACCCAGAGGGGCCTGAGCCATAGCATAGTTAGTTT...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTGTTTTTCCCTGGGATTaGGTGTTCTTCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCVFPWD*VFFTPT
Trigger: TGTTGGAGTGAAGAACACTCAATCCCAGGGAAAAAC...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACACTTCTTCAGAAATTaGACTTGCTCTAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTHFFRN*TCSKIH
Trigger: GTGGATTTTAGAGCAAGTTCAATTTCTGAAGAAGTG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTATTGGCTATGGATACTaGTCAGCTCATCCAAACAGG +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCIGYGY*SAHPNR
Trigger: CCTGTTTGGATGAGCTGATCAGTATCCATAGCCAAT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATTGAGAGATCAAATCTaGAATCCAGACCCACAGGAA +
Preference number: 4 (lower is better)
Translates to: SNLVWPLLALLEQFCATELRDQI*NPDPQE
Trigger: TTCCTGTGGGTCTGGATTTCAGATTTGATCTCTCAA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAACACATCCAAGTTGTTaGACATGTCAACAGTTTGCT +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSTHPSC*TCQQFA
Trigger: AGCAAACTGTTGACATGTGCAACAACTTGGATGTGT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTATTCAGAATCTTTCTTaGAGGGGCTATGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCIQNLS*RGYVAG
Trigger: TCCTGCCACATAGCCCCTCCAAGAAAGATTCTGAAT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCACTGCAATATTCTTTaGAATAAAACTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAHCNIL*NKTGYL
Trigger: CAAGTACCCAGTTTTATTCCAAAGAATATTGCAGTG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCTTAATTCTCGGGCTCTaGTGTCCAACATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPLILGL*CPTFSF
Trigger: AAAAGAAAATGTTGGACACCAGAGCCCGAGAATTAA...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTAAGGTAGGTCAGAGGTaGCGAGTTTCTTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCKVGQR*RVSSFS
Trigger: TGAGAATGAAGAAACTCGCCACCTCTGACCTACCTT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAAGAGTGACACTAACCTaGTTAAGGAAGTGTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SNLVWPLLALLEQFCATERVTLT*LRKCVV
Trigger: AACCACACACTTCCTTAACCAGGTTAGTGTCACTCT...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAATATTTTTGAAAAAGTaGAGTTCTGGCCGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPIFLKK*SSGRAQ
Trigger: CTGCGCCCGGCCAGAACTCCACTTTTTCAAAAATAT...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCTTCAATACTCAAGGCTaGGTGGACTCTACAGGGCAA +
Preference number: 4 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPFNTQG*VDSTGQ
Trigger: TTGCCCTGTAGAGTCCACCCAGCCTTGAGTATTGAA...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 72 bp TTTTGGTTTCTATCTCAGGACTCCCAAATCGTTCAATaGGACTTGAACTCAGAAGGGAAACTGGATGTTACT +
Preference number: 4 (lower is better)
Translates to: FWFLSQDSQIVQ*DLNSEGKLDVT
Trigger: AGTAACATCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGATAGAAACCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTTGTTATCCACCACTTTaGAAGGACAAAAATCCGCAC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCCYPPL*KDKNPH
Trigger: GTGCGGATTTTTGTCCTTTCAAAGTGGTGGATAACA...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTACACTTCTTCAGAAATTaGACTTGCTCTAAAATCCAC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLHFFRN*TCSKIH
Trigger: GTGGATTTTAGAGCAAGTTCAATTTCTGAAGAAGTG...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTAATACTGGCAAAGGTTaGAAGTGGCAGTTTGCATGT +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCNTGKG*KWQFAC
Trigger: ACATGCAAACTGCCACTTTCAACCTTTGCCAGTATT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGAGACCAGCTCTTTCATTaGAGACATAGAAAGTACAAG +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRDQLFH*RHRKYK
Trigger: CTTGTACTTTCTATGTCTTCAATGAAAGAGCTGGTC...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTATAAGACTGTCCATCTaGTTGAGGTTTGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIIRLSI*LRFVFI
Trigger: AATGAAAACAAACCTCAAGCAGATGGACAGTCTTAT...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCACTGCAATATTCTTTaGAATAAAACTGGGTACTTG +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNHCNIL*NKTGYL
Trigger: CAAGTACCCAGTTTTATTCCAAAGAATATTGCAGTG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACCACTTCATTGTCTTTaGTACACTGCAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTPLHCL*YTAIFF
Trigger: AAAGAATATTGCAGTGTACCAAAGACAATGAAGTGG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp ATTTCCTTCCTCAAGTGTTCAAATTTGGTTTGGCCTTaGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAA +
Preference number: 4 (lower is better)
Translates to: ISFLKCSNLVWP*LALLEQFCATE
Trigger: TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGAACACTTGAGGAAGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGACTGGATGTTACTTATTaGACTCCAGGTACACATTAT +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRLDVTY*TPGTHY
Trigger: ATAATGTGTACCTGGAGTTCAATAAGTAACATCCAG...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCCAAAGAATTCCCTCATaGTACCTCTTTCCAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPQRIPS*YLFPVR
Trigger: TCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTG...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAATGAGTTTTAACACATaGATAGATTCTTACAGCCAC +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSMSFNT*IDSYSH
Trigger: GTGGCTGTAAGAATCTATGCATGTGTTAAAACTCAT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAGCTACTAGAATTATGTaGGAAAACCCTTGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SNLVWPLLALLEQFCATEATRIM*ENPCLS
Trigger: ACTCAAACAAGGGTTTTCCCACATAATTCTAGTAGC...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGAACTCAGAAGGGAAACTaGATGTTACTTATTGAACTC +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRTQKGN*MLLIEL
Trigger: GAGTTCAATAAGTAACATCCAGTTTCCCTTCTGAGT...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 72 bp TTAACAGCTCAATTGAAGAACCTAGAAGAGATGCCATaGAGGCCACTTTCCTACAGTAATTCTAAGATTTAC +
Preference number: 4 (lower is better)
Translates to: LTAQLKNLEEMP*RPLSYSNSKIY
Trigger: GTAAATCTTAGAATTACTGTAGGAAAGTGGCCTCAATGGCATCTCTTCTAGGTTCTTCAATTGAGCTGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCATGTTCAAATTTGGTTTaGCCTTTGTTAGCACTGCTT +
Preference number: 4 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPCSNLV*PLLALL
Trigger: AAGCAGTGCTAACAAAGGCCAAACCAAATTTGAACA...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAATAGTATGGAACCTTTaGAAACTGACTTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: SNLVWPLLALLEQFCATEIVWNL*KLTSFS
Trigger: GGAAAATGAAGTCAGTTTCCAAAGGTTCCATACTAT...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 72 bp CATTCCTACAAGCAACATATGATATGTTCTTCATCTTaGCCAGCACTTGGTATTCTTCATCTTAGCCATTAT +
Preference number: 4 (lower is better)
Translates to: HSYKQHMICSSS*PALGILHLSHY
Trigger: ATAATGGCTAAGATGAAGAATACCAAGTGCTGGCAAAGATGAAGAACATATCATATGTTGCTTGTAGGAATG
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS GCA 90 bp TGCTGGAGCTCCTCCCGCTCCTTTTCCAGGTCCTGCTGCCCCTGCTaGACCTCCTCCTCGCGCTGGGCCAGGAGGGCCTCCCGCTCCCGC +
Preference number: 5 (lower is better)
Translates to: CWSSSRSFSRSCCPC*TSSSRWARRASRSR
Trigger: GCGGGAGCGGGAGGCCCTCCTGGCCCAGCGCGAGGAGGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGAGCGGGAGGAGCTCCAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CCA 90 bp TCGGCAGAGCACAGGCGCTTCACCGCGGCTGCTCGGGCTCCGCGCTaGCCCTGCACACAGCTCCAGTCCGCGCATGCGCCGAAAGACGCT +
Preference number: 5 (lower is better)
Translates to: SAEHRRFTAAARAPR*PCTQLQSAHAPKDA
Trigger: AGCGTCTTTCGGCGCATGCGCGGACTGGAGCTGTGTGCAGGGCCAGCGCGGAGCCCGAGCAGCCGCGGTGAAGCGCCTGTGCTCTGCCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560571.1
CDS GCA 90 bp GTGCCCTTCTTCTGCTGGAGCTCCTCCCGCTCCTTTTCCAGGTCCTaGTGCCCCTGCTGCACCTCCTCCTCGCGCTGGGCCAGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VPFFCWSSSRSFSRS*CPCCTSSSRWARRA
Trigger: GGCCCTCCTGGCCCAGCGCGAGGAGGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGAGCGGGAGGAGCTCCAGCAGAAGAAGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 90 bp TTGGCCAGGTCCTGGCGCTGCTTCTCCAGGCTGCGCTGCTTCTCCTaGTCAATGAGGGAGCTCGGGCGGGACAAGCTGCGAGTGAGCGCC +
Preference number: 5 (lower is better)
Translates to: LARSWRCFSRLRCFS*SMRELGRDKLRVSA
Trigger: GGCGCTCACTCGCAGCTTGTCCCGCCCGAGCTCCCTCATTGAGCAGGAGAAGCAGCGCAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 90 bp GCTCCCGCAGCTCCCTCTCACGAGCTTCCCACTCACGCTCGCGCCTaGGCTTCTCCTCGAGGTACTGGGCCTGCTGCTTCTGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: APAAPSHELPTHARA*ASPRGTGPAASAGW
Trigger: CCAACCTGCAGAAGCAGCAGGCCCAGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGTGGGAAGCTCGTGAGAGGGAGCTGCGGGAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS-3UTR CAA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCAACAGAGCGGAGCTGTaGTGCTCTGCCCCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRNRAEL*CSAPKA
Trigger: AGCCTTGGGGGCAGAGCACAACAGCTCCGCTCTGTT...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS TCA 90 bp GTGGATGGGAAACCTGACACAGGTCCCGTTCTGTCTGCCGCTGGCTaGGCCGCTCTGCCTCCCGGCGCAGCTGCTCCTGTTCCCTCTCAA +
Preference number: 5 (lower is better)
Translates to: VDGKPDTGPVLSAAG*AALPPGAAAPVPSQ
Trigger: TTGAGAGGGAACAGGAGCAGCTGCGCCGGGAGGCAGAGCGGCTCAGCCAGCGGCAGACAGAACGGGACCTGTGTCAGGTTTCCCATCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS-3UTR CAA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCTCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRSSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS CCA 90 bp CGTCGCCCCTTCCTGGTTGTGGATACTGAGAGCTCCGCGGCCACCTaGCTTCTGCAACAGGAACCACGTCAACCTCAGCAGTCCCAGCCG +
Preference number: 5 (lower is better)
Translates to: RRPFLVVDTESSAAT*LLQQEPRQPQQSQP
Trigger: CGGCTGGGACTGCTGAGGTTGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGCGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp CCTCGCTCCAAGGCCAAGCTCACAGGCGTCGCCCCTTCCTGGTTGTaGATACTGAGAGCTCCGCGGCCACCTGGCTTCTGCAACAGGAAC +
Preference number: 5 (lower is better)
Translates to: PRSKAKLTGVAPSWL*ILRAPRPPGFCNRN
Trigger: GTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGCGACGCCTGTGAGCTTGGCCTTGGAGCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS-3UTR CAA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGCPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp CCAAGGCCAAGCTCACAGGCGTCGCCCCTTCCTGGTTGTGGATACTaGGAGCTCCGCGGCCACCTGGCTTCTGCAACAGGAACCACGTCA +
Preference number: 5 (lower is better)
Translates to: PRPSSQASPLPGCGY*ELRGHLASATGTTS
Trigger: TGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGCGACGCCTGTGAGCTTGGCCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp CATGGCAACAGAGCGGAGCTGTTGTGCTCTGCCCCCAAGGCTTCCTaGCTTGACTCTGTGGCCAGACTTGCTCCTGGTGGCACCAGGCTC +
Preference number: 5 (lower is better)
Translates to: HGNRAELLCSAPKAS*LDSVARLAPGGTRL
Trigger: GAGCCTGGTGCCACCAGGAGCAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCTGTTGCCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp AAGGTCTCTGCTCTCCGGGGCAGGGAAACGGGACCGACCACATCTTaGTCAATGGGGCTGCTGACAGTCGGCCCAAGTGTGCCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: KVSALRGRETGPTTS*SMGLLTVGPSVPPR
Trigger: TCTGGGAGGCACACTTGGGCCGACTGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCCCGTTTCCCTGCCCCGGAGAGCAGAGACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 90 bp GCAGCACGCAGTCGCTCCAGGTCATACTGGTATGTGCCCTTCTTCTaGTGGAGCTCCTCCCGCTCCTTTTCCAGGTCCTGCTGCCCCTGC +
Preference number: 5 (lower is better)
Translates to: AARSRSRSYWYVPFF*WSSSRSFSRSCCPC
Trigger: GCAGGGGCAGCAGGACCTGGAAAAGGAGCGGGAGGAGCTCCAGCAGAAGAAGGGCACATACCAGTATGACCTGGAGCGACTGCGTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CCA 90 bp GCACGCAGTCGCTCCAGGTCATACTGGTATGTGCCCTTCTTCTGCTaGAGCTCCTCCCGCTCCTTTTCCAGGTCCTGCTGCCCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ARSRSRSYWYVPFFC*SSSRSFSRSCCPCC
Trigger: GCAGCAGGGGCAGCAGGACCTGGAAAAGGAGCGGGAGGAGCTCCAGCAGAAGAAGGGCACATACCAGTATGACCTGGAGCGACTGCGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS-3UTR CAA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCAGGAGTACTGCCCATaGGTAGGCTCTCCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRQEYCP*VGSPQV
Trigger: CACCTGGGGAGAGCCTACCAATGGGCAGTACTCCTG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTGGAAGGGCCGTGAATaGTCCAATCCAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGWKGRE*SNPGWL
Trigger: CAGCCATCCTGGATTGGACAATTCACGGCCCTTCCA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGACCGAGGACGCTCCTaGGGCTGTGAGGGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQDRGRS*GCEGLF
Trigger: AAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGTC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGACCGAGGACGCTCCTaGGGCTGTGAGGGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRDRGRS*GCEGLF
Trigger: AAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGTC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp GGATTGCTGGAGGGGCGGGACCCTCATGCTCTCCACCAAGTCCTGTaGGACTGGTATTCCCCATCCCGTGCTGAAGCTCTGCAGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GLLEGRDPHALHQVL*DWYSPSRAEALQQW
Trigger: CCACTGCTGCAGAGCTTCAGCACGGGATGGGGAATACCAGTCTCACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCCTCCAGCAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp CCTTCCTGGTTGTGGATACTGAGAGCTCCGCGGCCACCTGGCTTCTaGAACAGGAACCACGTCAACCTCAGCAGTCCCAGCCGCACAGCA +
Preference number: 5 (lower is better)
Translates to: PSWLWILRAPRPPGF*NRNHVNLSSPSRTA
Trigger: TGCTGTGCGGCTGGGACTGCTGAGGTTGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp TCTGCCTCCCGGCGCAGCTGCTCCTGTTCCCTCTCAAGCTGTTTCTaGGCAGCACGCAGTCGCTCCAGGTCATACTGGTATGTGCCCTTC +
Preference number: 5 (lower is better)
Translates to: SASRRSCSCSLSSCF*AARSRSRSYWYVPF
Trigger: GAAGGGCACATACCAGTATGACCTGGAGCGACTGCGTGCTGCCCAGAAACAGCTTGAGAGGGAACAGGAGCAGCTGCGCCGGGAGGCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS-3UTR CAA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCGGCCTTACCCACACTTaGCAGGGAAGAGTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGGLTHT*QGRVSV
Trigger: AACACTGACTCTTCCCTGCAAAGTGTGGGTAAGGCC...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAACAGAGCGGAGCTGTaGTGCTCTGCCCCCAAGGCT +
Preference number: 5 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPNRAEL*CSAPKA
Trigger: AGCCTTGGGGGCAGAGCACAACAGCTCCGCTCTGTT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGGGTCAGTCACAGCTTaGTCCTGTAGAGCCACTGGC +
Preference number: 5 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQGSVTA*SCRATG
Trigger: GCCAGTGGCTCTACAGGACAAAGCTGTGACTGACCC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGGGACCGACCACATCTaGCTCAATGGGGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLGTDHI*LNGAAD
Trigger: GTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCCC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSIICCL*SRTWGR
Trigger: GCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS CCA 90 bp GCAGCCTCCTCTATCAAGTCTGCCCCCTTAGGCAGAGGTGCGTCCTaGGCAGAGACCATGCAAGGTAGAGAGGGAGTGCTCCTTTCCCTG +
Preference number: 5 (lower is better)
Translates to: AASSIKSAPLGRGAS*AETMQGREGVLLSL
Trigger: CAGGGAAAGGAGCACTCCCTCTCTACCTTGCATGGTCTCTGCCCAGGACGCACCTCTGCCTAAGGGGGCAGACTTGATAGAGGAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS-3UTR CAA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGGTGAGCTGGGTTGCCTaGCTGTGGTGCTTTCGGACT +
Preference number: 5 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEVSWVA*LWCFRT
Trigger: AGTCCGAAAGCACCACAGCAAGGCAACCCAGCTCAC...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGAAAGTGCGTCATCCTaGGTTACTGATTCACTGCCT +
Preference number: 5 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRESASS*VTDSLP
Trigger: AGGCAGTGAATCAGTAACCAAGGATGACGCACTTTC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTTGGGCTGTGAGGGCTaGTTTCTCATAATGACCGTG +
Preference number: 5 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGLGCEG*FLIMTV
Trigger: CACGGTCATTATGAGAAACAAGCCCTCACAGCCCAA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp CCAGAGGAATACTGGGCTGTGCCTGGCTCCATGACCAAGTCTCTCTaGAGCACAGCATCTCCACTGCTCAGGGACTCCTGGTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: PEEYWAVPGSMTKSL*STASPLLRDSWSVG
Trigger: GCCCACAGACCAGGAGTCCCTGAGCAGTGGAGATGCTGTGCTTCAGAGAGACTTGGTCATGGAGCCAGGCACAGCCCAGTATTCCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 90 bp TGCTCTCCACCAAGTCCTGTGAGACTGGTATTCCCCATCCCGTGCTaGAGCTCTGCAGCAGTGGAGGATGTGGACAGGCCTACTGCCCTG +
Preference number: 5 (lower is better)
Translates to: CSPPSPVRLVFPIPC*SSAAVEDVDRPTAL
Trigger: CAGGGCAGTAGGCCTGTCCACATCCTCCACTGCTGCAGAGCTTCAGCACGGGATGGGGAATACCAGTCTCACAGGACTTGGTGGAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp GATGACAGCATCCACTATACGGCTGGCAGCCTCCTCTATCAAGTCTaGCCCCTTAGGCAGAGGTGCGTCCTGGGCAGAGACCATGCAAGG +
Preference number: 5 (lower is better)
Translates to: DDSIHYTAGSLLYQV*PLRQRCVLGRDHAR
Trigger: CCTTGCATGGTCTCTGCCCAGGACGCACCTCTGCCTAAGGGGGCAGACTTGATAGAGGAGGCTGCCAGCCGTATAGTGGATGCTGTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp TGGTATTCCCCATCCCGTGCTGAAGCTCTGCAGCAGTGGAGGATGTaGACAGGCCTACTGCCCTGTCTTCTAGTGGCCGCGTATCAGGCT +
Preference number: 5 (lower is better)
Translates to: WYSPSRAEALQQWRM*TGLLPCLLVAAYQA
Trigger: AGCCTGATACGCGGCCACTAGAAGACAGGGCAGTAGGCCTGTCCACATCCTCCACTGCTGCAGAGCTTCAGCACGGGATGGGGAATACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS-3UTR CAA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCAGTCACTGTGTTCTGTaGACATGCAGAGTCTGCACA +
Preference number: 5 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGSHCVL*TCRVCT
Trigger: TGTGCAGACTCTGCATGTCAACAGAACACAGTGACT...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGGCTCAACAAGACGTTaGGAATCAGGATGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSGSTRR*ESGCLG
Trigger: CCCAAGACATCCTGATTCCAAACGTCTTGTTGAGCC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTGTATGGAGACACTTTaGGAGAGCGAGACACTCTGC +
Preference number: 5 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSCMETL*ESETLC
Trigger: GCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATACA...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGACCGACCACATCTaGCTCAATGGGGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAGTDHI*LNGAAD
Trigger: GTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCCC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: IICCLLSRTWGRPGGLDACPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCCTGACCAAATCGTTTaGAGTGGGGTCTGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQPDQIV*SGVWAD
Trigger: ATCTGCCCAGACCCCACTCAAAACGATTTGGTCAGG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp CACAGAAGCGGGGGCGCATGCCGTCAGGGCAGAGCTCAGCAGCTTTaGGCTGCCATTAGTGAAATCGTAAGAGGAAGCCAGAGACTGGCT +
Preference number: 5 (lower is better)
Translates to: HRSGGACRQGRAQQL*AAISEIVRGSQRLA
Trigger: AGCCAGTCTCTGGCTTCCTCTTACGATTTCACTAATGGCAGCTCAAAGCTGCTGAGCTCTGCCCTGACGGCATGCGCCCCCGCTTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557852.2
CDS GCA 90 bp AGTCTCTTCAGAAGAAGAAAGTCGCTGAGGGTCCGTGGGCTCCGGTaGACAGGGAAGAAACTGGCCATCTGTCTCTGGGGCACTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SLFRRRKSLRVRGLR*TGKKLAICLWGTGR
Trigger: CCTTCCAGTGCCCCAGAGACAGATGGCCAGTTTCTTCCCTGTGCACCGGAGCCCACGGACCCTCAGCGACTTTCTTCTTCTGAAGAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000558166.2
ENST00000558811.2
ENST00000559362.5
CDS GCA 90 bp TCAGACCCATCTGGCAACAGACATGGCAACAGAGCGGAGCTGTTGTaGTCTGCCCCCAAGGCTTCCTGCCTTGACTCTGTGGCCAGACTT +
Preference number: 5 (lower is better)
Translates to: SDPSGNRHGNRAELL*SAPKASCLDSVARL
Trigger: AAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGATGGGTCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp GAGTGCTCTCAGTCTCTTCAGAAGAAGAAAGTCGCTGAGGGTCCGTaGGCTCCGGTGCACAGGGAAGAAACTGGCCATCTGTCTCTGGGG +
Preference number: 5 (lower is better)
Translates to: ECSQSLQKKKVAEGP*APVHREETGHLSLG
Trigger: CCCCAGAGACAGATGGCCAGTTTCTTCCCTGTGCACCGGAGCCCACGGACCCTCAGCGACTTTCTTCTTCTGAAGAGACTGAGAGCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000558166.2
ENST00000558811.2
ENST00000559362.5
CDS CCA 90 bp GCAGTTAAGAGCATCGGACCCATCAGACCCATCTGGCAACAGACATaGCAACAGAGCGGAGCTGTTGTGCTCTGCCCCCAAGGCTTCCTG +
Preference number: 5 (lower is better)
Translates to: AVKSIGPIRPIWQQT*QQSGAVVLCPQGFL
Trigger: CAGGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGATGGGTCTGATGGGTCCGATGCTCTTAACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp CTCTCAAGCTGTTTCTGGGCAGCACGCAGTCGCTCCAGGTCATACTaGTATGTGCCCTTCTTCTGCTGGAGCTCCTCCCGCTCCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSSCFWAARSRSRSY*YVPFFCWSSSRSFS
Trigger: GGAAAAGGAGCGGGAGGAGCTCCAGCAGAAGAAGGGCACATACCAGTATGACCTGGAGCGACTGCGTGCTGCCCAGAAACAGCTTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS-3UTR CAA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAGAGATGAGGATGGCTaGTTTCCGACACCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPRDEDG*FPTPAP
Trigger: AGGAGCTGGTGTCGGAAACAAGCCATCCTCATCTCT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGACATGTTCTCATCATaGCCAACTCCAGTAATGTTC +
Preference number: 5 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRDMFSS*PTPVMF
Trigger: GAACATTACTGGAGTTGGCAATGATGAGAACATGTC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGTCCAATGACCCTGATTaGGCTATGGAAGGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQSNDPD*AMEGAD
Trigger: ATCTGCACCTTCCATAGCCAAATCAGGGTCATTGGA...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAIICCL*SRTWGR
Trigger: GCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGAATTGAAGGCCACGTaGGAAGCACAAAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRELKAT*EAQNFP
Trigger: TGGAAAATTTTGTGCTTCCAACGTGGCCTTCAATTC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGCCCCAAGAACTCGCATaGAACTCCGGTGGTTCATTT +
Preference number: 5 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRPQELA*NSGGSF
Trigger: AAATGAACCACCGGAGTTCAATGCGAGTTCTTGGGG...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS TCA 90 bp TCCGCACGTTCCTGGGTATCCCTTACAGGGTCAGAGGTGACTGTATaGGCCTGTGGGTCTTCACAGTGGGAGGCATCGGGTGGATCTTGT +
Preference number: 5 (lower is better)
Translates to: SARSWVSLTGSEVTV*ACGSSQWEASGGSC
Trigger: ACAAGATCCACCCGATGCCTCCCACTGTGAAGACCCACAGGCTCATACAGTCACCTCTGACCCTGTAAGGGATACCCAGGAACGTGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp TTGATATTCAGAGCTTCTGGGATTGCTGGAGGGGCGGGACCCTCATaGTCTCCACCAAGTCCTGTGAGACTGGTATTCCCCATCCCGTGC +
Preference number: 5 (lower is better)
Translates to: LIFRASGIAGGAGPS*SPPSPVRLVFPIPC
Trigger: GCACGGGATGGGGAATACCAGTCTCACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGAATATCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp CAGGGAAGAGTCAGTGTTCCCCTTGATATTCAGAGCTTCTGGGATTaGTGGAGGGGCGGGACCCTCATGCTCTCCACCAAGTCCTGTGAG +
Preference number: 5 (lower is better)
Translates to: QGRVSVPLDIQSFWD*WRGGTLMLSTKSCE
Trigger: CTCACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGAATATCAAGGGGAACACTGACTCTTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp TTCATTTCTGCATCGCTGGCTGCATTTTTCCCAGGCCCCCAGCTGTaGCTCCGGAAGGGAGAAAGAGAGCGCATGGAGCTCCTTAGGACA +
Preference number: 5 (lower is better)
Translates to: FISASLAAFFPGPQL*LRKGERERMELLRT
Trigger: TGTCCTAAGGAGCTCCATGCGCTCTCTTTCTCCCTTCCGGAGGCACAGCTGGGGGCCTGGGAAAAATGCAGCCAGCGATGCAGAAATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS CCA 90 bp AGAAGGCTGACTGCAGTTAAGAGCATCGGACCCATCAGACCCATCTaGCAACAGACATGGCAACAGAGCGGAGCTGTTGTGCTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RRLTAVKSIGPIRPI*QQTWQQSGAVVLCP
Trigger: GGGGCAGAGCACAACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGATGGGTCTGATGGGTCCGATGCTCTTAACTGCAGTCAGCCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp AGCCTCTTCTGTGTTGGAGCGGAAGAGAACTCTAGGGCTATGTGTTaGGGAGCAATCCTCTGGGAGAGGGGTGCTGCACTCAGCCATGTC +
Preference number: 5 (lower is better)
Translates to: SLFCVGAEENSRAMC*GAILWERGAALSHV
Trigger: GACATGGCTGAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGAGTTCTCTTCCGCTCCAACACAGAAGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS-3UTR CAA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGAAGACTCAGCAGGTTaGTTACCATCCAGGGAACTG +
Preference number: 5 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLEDSAG*LPSREL
Trigger: CAGTTCCCTGGATGGTAACAAACCTGCTGAGTCTTC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGAAAGTGCGTCATCCTaGGTTACTGATTCACTGCCT +
Preference number: 5 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRESASS*VTDSLP
Trigger: AGGCAGTGAATCAGTAACCAAGGATGACGCACTTTC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCACCAAGGCTTCCTGCCTaGACTCTGTGGCCAGACTTG +
Preference number: 5 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPPRLPA*TLWPDL
Trigger: CAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTGG...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTTATCGCCTGGGTCATaGGGCCTTGCTTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLLSPGS*GLASSS
Trigger: TGAAGATGAAGCAAGGCCCAATGACCCAGGCGATAA...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGGCTTTGCCGATCTCTaGACCTGTTTGGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSGFADL*TCLALK
Trigger: TTTTAAAGCCAAACAGGTCAAGAGATCGGCAAAGCC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCGGAATTTCCAGGTGTTaGACATGTTCTCATCATTGC +
Preference number: 5 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGGISRC*TCSHHC
Trigger: GCAATGATGAGAACATGTCAAACACCTGGAAATTCC...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp ATGAGCCTGTGGGTCTTCACAGTGGGAGGCATCGGGTGGATCTTGTaGGCTGGGTTGCCTTGCTGTGGTGCTTTCGGACTCGCTAACTAT +
Preference number: 5 (lower is better)
Translates to: MSLWVFTVGGIGWIL*AGLPCCGAFGLANY
Trigger: ATAGTTAGCGAGTCCGAAAGCACCACAGCAAGGCAACCCAGCTCACAAGATCCACCCGATGCCTCCCACTGTGAAGACCCACAGGCTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 90 bp GACAAAAATCCGCACGTTCCTGGGTATCCCTTACAGGGTCAGAGGTaGCTGTATGAGCCTGTGGGTCTTCACAGTGGGAGGCATCGGGTG +
Preference number: 5 (lower is better)
Translates to: DKNPHVPGYPLQGQR*LYEPVGLHSGRHRV
Trigger: CACCCGATGCCTCCCACTGTGAAGACCCACAGGCTCATACAGTCACCTCTGACCCTGTAAGGGATACCCAGGAACGTGCGGATTTTTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp GGAAGAGTCAGTGTTCCCCTTGATATTCAGAGCTTCTGGGATTGCTaGAGGGGCGGGACCCTCATGCTCTCCACCAAGTCCTGTGAGACT +
Preference number: 5 (lower is better)
Translates to: GRVSVPLDIQSFWDC*RGGTLMLSTKSCET
Trigger: AGTCTCACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGAATATCAAGGGGAACACTGACTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp TTTGGAGAGCGAGACACTCTGCTGGGATCGTCTATTGGCAAATATTaGGGTGGTAGCGGTTTCATCCACCAGGAGGACTGCGGACCGAGG +
Preference number: 5 (lower is better)
Translates to: FGERDTLLGSSIGKY*GGSGFIHQEDCGPR
Trigger: CCTCGGTCCGCAGTCCTCCTGGTGGATGAAACCGCTACCACCCCAATATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000557852.2
ENST00000559278.1
ENST00000560482.5
ENST00000560579.5
ENST00000560676.5
CDS-3UTR CAA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCTGAAGGCAGCTGTCTaGATCAGATACAGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPLKAAV*IRYSSR
Trigger: TCTGGAACTGTATCTGATCAAGACAGCTGCCTTCAG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCATGTGGGGCCACTTCCTaGTTATGTTCAGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: RASSSPDLHWQELLHMASCGATS*LCSVSA
Trigger: GGCAGAAACTGAACATAACAAGGAAGTGGCCCCACA...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGGTCAGTCACAGCTTaGTCCTGTAGAGCCACTGGC +
Preference number: 5 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEGSVTA*SCRATG
Trigger: GCCAGTGGCTCTACAGGACAAAGCTGTGACTGACCC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAAGTGCTCCAGCGGCCTaGACTTGTTCGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPSAPAA*TCSMTA
Trigger: TGCTGTCATCGAACAAGTCAAGGCCGCTGGAGCACT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCAGGAGTACTGCCCATaGGTAGGCTCTCCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVQEYCP*VGSPQV
Trigger: CACCTGGGGAGAGCCTACCAATGGGCAGTACTCCTG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCATTCAGAATCTTTCTaGGAGGGGCTATGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAHSESF*EGLCGR
Trigger: CCTGCCACATAGCCCCTCCAAGAAAGATTCTGAATG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAACTTTCTCGGCAGCCTTaGTGGACAAAAGCACTGCAA +
Preference number: 5 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQELSRQP*WTKALQ
Trigger: TTGCAGTGCTTTTGTCCACAAAGGCTGCCGAGAAAG...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGGAATTTCCAGGTGTTaGACATGTTCTCATCATTGC +
Preference number: 5 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSGISRC*TCSHHC
Trigger: GCAATGATGAGAACATGTCAAACACCTGGAAATTCC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTGCTGTTTTAGAAACTaGCTGTCTATTATCCGACTC +
Preference number: 5 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGCCFRN*LSIIRL
Trigger: GAGTCGGATAATAGACAGCAAGTTTCTAAAACAGCA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGTGAGAAGAACTGCTaGAACCTCTTTCAACCTTCC +
Preference number: 5 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSEKNC*NLFQPS
Trigger: GGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCACT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 5 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSCPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGACAGTCCTGTCCACCTaGGAGATGTCACAGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQTVLST*EMSQRL
Trigger: CAGCCTCTGTGACATCTCCAAGGTGGACAGGACTGT...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CAA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAAGAGACCCTCTAACATaGATGTCAAGCTCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQERDPLT*MSSSVA
Trigger: CGCCACAGAGCTTGACATCAATGTTAGAGGGTCTCT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTG +
Preference number: 5 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGKGLKT*CSRLIL
Trigger: CAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTT...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTCCCTGCCCTCTTCTTaGTCTCTGAGGATGGACGAG +
Preference number: 5 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRSLPSS*SLRMDE
Trigger: CTCGTCCATCCTCAGAGACAAAGAAGAGGGCAGGGA...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp AAGTGGCCTTACCCACACTTTGCAGGGAAGAGTCAGTGTTCCCCTTaGTATTCAGAGCTTCTGGGATTGCTGGAGGGGCGGGACCCTCAT +
Preference number: 5 (lower is better)
Translates to: KWPYPHFAGKSQCSP*YSELLGLLEGRDPH
Trigger: ATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGAATATCAAGGGGAACACTGACTCTTCCCTGCAAAGTGTGGGTAAGGCCACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp GGGTCTTCACAGTGGGAGGCATCGGGTGGATCTTGTGAGCTGGGTTaGCTTGCTGTGGTGCTTTCGGACTCGCTAACTATGTTATCACAC +
Preference number: 5 (lower is better)
Translates to: GSSQWEASGGSCELG*LAVVLSDSLTMLSH
Trigger: GTGTGATAACATAGTTAGCGAGTCCGAAAGCACCACAGCAAGGCAACCCAGCTCACAAGATCCACCCGATGCCTCCCACTGTGAAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS-3UTR CAA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAACGGGAAGGCCCTCTTaGGAAGCACAGAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTTGRPS*EAQSCT
Trigger: GGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCGT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTAATCTGAGGGTGACATaGCCTCACCTATGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGINLRVT*PHLCLL
Trigger: CAGCAGGCATAGGTGAGGCAATGTCACCCTCAGATT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTTTCACATCTTTTCGTaGGCCTTTGTTATCCACCAC +
Preference number: 5 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRFHIFS*AFVIHH
Trigger: GTGGTGGATAACAAAGGCCAACGAAAAGATGTGAAA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGAGTCAGTGTTCCCCTaGATATTCAGAGCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAESVFP*IFRASG
Trigger: CCCAGAAGCTCTGAATATCAAGGGGAACACTGACTC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTCCAAGGCTTCCTGCCTaGACTCTGTGGCCAGACTTG +
Preference number: 5 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCPRLPA*TLWPDL
Trigger: CAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTGG...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTAGAGATGAGGATGGCTaGTTTCCGACACCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIRDEDG*FPTPAP
Trigger: AGGAGCTGGTGTCGGAAACAAGCCATCCTCATCTCT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCACTTTCTCGGCAGCCTTaGTGGACAAAAGCACTGCAA +
Preference number: 5 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAALSRQP*WTKALQ
Trigger: TTGCAGTGCTTTTGTCCACAAAGGCTGCCGAGAAAG...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGTATGGAGACACTTTaGGAGAGCGAGACACTCTGC +
Preference number: 5 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQCMETL*ESETLC
Trigger: GCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATACA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGCTGTTTCGTTCCTCTTaGGAGCTGGCATGGACTTCT +
Preference number: 5 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLLFRSS*ELAWTS
Trigger: AGAAGTCCATGCCAGCTCCAAAGAGGAACGAAACAG...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGGGATCCTCATCAGCTaGGTATGTGGATGGGAAACC +
Preference number: 5 (lower is better)
Translates to: SSSPDLHWQELLHMASPFGILIS*VCGWET
Trigger: GGTTTCCCATCCACATACCAAGCTGATGAGGATCCC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGAAAGGCCCCTTATCTTaGTGTGTCCGAGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLKGPLS*CVREML
Trigger: CAGCATCTCTCGGACACACAAAGATAAGGGGCCTTT...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATAGCACCAACCTCGTATaGTTCCAAACCCGGAGAACA +
Preference number: 5 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNSTNLV*FQTRRT
Trigger: TGTTCTCCGGGTTTGGAACAATACGAGGTTGGTGCT...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTG +
Preference number: 5 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSKGLKT*CSRLIL
Trigger: CAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCTCTTTGTGACCACTaGAAGCCCATTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIPLCDH*KPIHQD
Trigger: GTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS GCA 90 bp GTCTATTTGGGCTTCCTCAGCGTCACCCATGGTACAGCTGTGGTCTaGTCCCTCCAGCTTCCCTTTCTCCCAATCAAGAGGTATCATCTC +
Preference number: 5 (lower is better)
Translates to: VYLGFLSVTHGTAVV*SLQLPFLPIKRYHL
Trigger: GAGATGATACCTCTTGATTGGGAGAAAGGGAAGCTGGAGGGAGCAGACCACAGCTGTACCATGGGTGACGCTGAGGAAGCCCAAATAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp TCATCGTCTATTTGGGCTTCCTCAGCGTCACCCATGGTACAGCTGTaGTCTGCTCCCTCCAGCTTCCCTTTCTCCCAATCAAGAGGTATC +
Preference number: 5 (lower is better)
Translates to: SSSIWASSASPMVQL*SAPSSFPFSQSRGI
Trigger: GATACCTCTTGATTGGGAGAAAGGGAAGCTGGAGGGAGCAGACCACAGCTGTACCATGGGTGACGCTGAGGAAGCCCAAATAGACGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS-3UTR CAA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGTCGCCCCTTCCTGGTaGTGGATACTGAGAGCTCCG +
Preference number: 5 (lower is better)
Translates to: MGCFVALVPETPRSRWCTVAPSW*WILRAP
Trigger: CGGAGCTCTCAGTATCCACAACCAGGAAGGGGCGAC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGTCAGAGCTTCTGGGATaGCTGGAGGGGCGGGACCCT +
Preference number: 5 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLSELLG*LEGRDP
Trigger: AGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGA...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGGATGTCTTGGGTGTaGTGTGATATATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRRMSWV*CDIFSL
Trigger: AAGAGAGAATATATCACACAACACCCAAGACATCCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCCTGGGTCATTGGGCCTaGCTTCATCTTCAGTGTAGC +
Preference number: 5 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSLGHWA*LHLQCS
Trigger: GCTACACTGAAGATGAAGCAAGGCCCAATGACCCAG...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTTGGAAGGGCCGTGAATaGTCCAATCCAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCWKGRE*SNPGWL
Trigger: CAGCCATCCTGGATTGGACAATTCACGGCCCTTCCA...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGCTGGGATCGTCTATaGGCAAATATTGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQCWDRL*ANIGVV
Trigger: TACCACCCCAATATTTGCCAATAGACGATCCCAGCA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATGCTGGGATCGTCTATaGGCAAATATTGGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAACWDRL*ANIGVV
Trigger: TACCACCCCAATATTTGCCAATAGACGATCCCAGCA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGTGTTGCCCACAAAACTaGCCATATGTCTTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQCCPQN*PYVFFK
Trigger: TTTAAAGAAGACATATGGCAAGTTTTGTGGGCAACA...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTTAAAGAGATCACTGTaGACTTCTGGTCCAATGATG +
Preference number: 5 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRLKRSL*TSGPMM
Trigger: CATCATTGGACCAGAAGTCAACAGTGATCTCTTTAA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTATTAAAGGTCCTCCTTaGAGAGCCTCTTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAIKGPP*RASSVL
Trigger: CAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAAT...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCCTTCTCGCCTCCTTTaGAAGCATTCATCTGATGGC +
Preference number: 5 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTPSRLL*KHSSDG
Trigger: GCCATCAGATGAATGCTTCAAAAGGAGGCGAGAAGG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTCCAATGACCCTGATTaGGCTATGGAAGGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNSNDPD*AMEGAD
Trigger: ATCTGCACCTTCCATAGCCAAATCAGGGTCATTGGA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAATATCCACTGTTAACTaGGGGACCAGTGCAAGTCCT +
Preference number: 5 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQISTVN*GTSASP
Trigger: AGGACTTGCACTGGTCCCCAAGTTAACAGTGGATAT...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CAA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCTTTGGGCTTCATTTaGACCTTTGCACAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIPLGFI*TFAQEA
Trigger: AGCCTCCTGTGCAAAGGTCAAAATGAAGCCCAAAGG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CAA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAATCTGCAAGGCCAGCTaGCAATTCATCAATAAGCAC +
Preference number: 5 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEICKAS*QFINKH
Trigger: GTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGAT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGATGAAGTTGGGTGGTTaGAGGGAATTCCGGGCACTA +
Preference number: 5 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQMKLGG*REFRAL
Trigger: TAGTGCCCGGAATTCCCTCAAACCACCCAACTTCAT...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS GCA 90 bp TGTCCCCAATACATTCCACTCCGTGGGCAGCTTCAGGTGCCTGAATaGCAGCACCAACTTCTTATCAAGGGAATTCACATCCCCAGATGG +
Preference number: 5 (lower is better)
Translates to: CPQYIPLRGQLQVPE*QHQLLIKGIHIPRW
Trigger: CCATCTGGGGATGTGAATTCCCTTGATAAGAAGTTGGTGCTGGCATTCAGGCACCTGAAGCTGCCCACGGAGTGGAATGTATTGGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560302.5
CDS CCA 90 bp CTCGGTTTATCTTCAGCAATACCACGTCCACAGTCCTGTCCACCTTaGAGATGTCACAGAGGCTGTAGCGCCTCTTGTGCCGTTCATACA +
Preference number: 5 (lower is better)
Translates to: LGLSSAIPRPQSCPP*RCHRGCSASCAVHT
Trigger: TGTATGAACGGCACAAGAGGCGCTACAGCCTCTGTGACATCTCCAAGGTGGACAGGACTGTGGACGTGGTATTGCTGAAGATAAACCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000560676.5
CDS-3UTR CAA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTACGGGAAGGCCCTCTTaGGAAGCACAGAGCTGCACC +
Preference number: 5 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFTGRPS*EAQSCT
Trigger: GGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCGT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGTGAGCTGGGTTGCCTaGCTGTGGTGCTTTCGGACT +
Preference number: 5 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWVSWVA*LWCFRT
Trigger: AGTCCGAAAGCACCACAGCAAGGCAACCCAGCTCAC...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCTTACCCACACTTaGCAGGGAAGAGTCAGTGTT +
Preference number: 5 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWGLTHT*QGRVSV
Trigger: AACACTGACTCTTCCCTGCAAAGTGTGGGTAAGGCC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTAAATTGTTGAGTATCTaGTCCAGGAGGTGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAKLLSI*SRRWCS
Trigger: AGAACACCACCTCCTGGACAAGATACTCAACAATTT...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACATCTTTTTCCTTTTCTTaGCTCTTCTTGCTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTSFSFS*LFLLLD
Trigger: GTCTAGCAGCAAGAAGAGCAAAGAAAAGGAAAAAGA...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTTTTCCTTTTCTTaGCTCTTCTTGCTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSFSFS*LFLLLD
Trigger: GTCTAGCAGCAAGAAGAGCAAAGAAAAGGAAAAAGA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATTGGGCTGCTTCATTTaGACCTTTGCACAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILGCFI*TFAQEA
Trigger: AGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCCAA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTGCTGTTTTAGAAACTaGCTGTCTATTATCCGACTC +
Preference number: 5 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLCCFRN*LSIIRL
Trigger: GAGTCGGATAATAGACAGCAAGTTTCTAAAACAGCA...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGCTCATATATTACTTCTaGCCGTTTGACCACATCTTT +
Preference number: 5 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRLIYYF*PFDHIF
Trigger: AAAGATGTGGTCAAACGGCAAGAAGTAATATATGAG...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGACATCCCCTATCCTCTaGATGAGAAAGTTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: GPAQPESPGQSQIMAEAETSPIL*MRKFFS
Trigger: TGAAAAGAACTTTCTCATCAAGAGGATAGGGGATGT...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTCCTGCTCCACTTCATaGTCTTTGGTACACTGCAAT +
Preference number: 5 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCSCSTS*SLVHCN
Trigger: ATTGCAGTGTACCAAAGACAATGAAGTGGAGCAGGA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAAGTGAGAAGAACTGCTaGAACCTCTTTCAACCTTCC +
Preference number: 5 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAASEKNC*NLFQPS
Trigger: GGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCACT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGAGATGCTGTTCCTTTTaGGGGACACTGAAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLRCCSF*GTLKVL
Trigger: CAGAACTTTCAGTGTCCCCAAAAAGGAACAGCATCT...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAAAGGCCCCTTATCTTaGTGTGTCCGAGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEKGPLS*CVREML
Trigger: CAGCATCTCTCGGACACACAAAGATAAGGGGCCTTT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTTCTGGTCCTTTGTTaGTCTGGCTGGTTGAACTCA +
Preference number: 5 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLLVLC*SGWLNS
Trigger: TGAGTTCAACCAGCCAGACAAACAAAGGACCAGAAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGCTTCTGGTCCTTTGTTaGTCTGGCTGGTTGAACTCA +
Preference number: 5 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQLLVLC*SGWLNS
Trigger: TGAGTTCAACCAGCCAGACAAACAAAGGACCAGAAG...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGAATACTGGCAAAGGTaGAAAGTGGCAGTTTGCATG +
Preference number: 5 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLEYWQR*KVAVCM
Trigger: CATGCAAACTGCCACTTTCAACCTTTGCCAGTATTC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGTACGAAGCCAGTATGTaGTGGCAAAATTCGAGAAAA +
Preference number: 5 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEYEASM*WQNSRK
Trigger: TTTTCTCGAATTTTGCCACAACATACTGGCTTCGTA...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp ATGTTCCATTTCCCCTGCAGTGTCTGGGGTACTGACATTTGTTGTTaGAATGCCTCCCAGTTCACCTCCAGAGGAATACTGGGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: MFHFPCSVWGTDICC*NASQFTSRGILGCA
Trigger: GGCACAGCCCAGTATTCCTCTGGAGGTGAACTGGGAGGCATTTCAACAACAAATGTCAGTACCCCAGACACTGCAGGGGAAATGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 90 bp CAGAGGGGCACCAGCTCATACTTCTCCTATGAATGGGAGGTCTCCTaGCAACATCCCCAAGAACTCGCATTGAACTCCGGTGGTTCATTT +
Preference number: 5 (lower is better)
Translates to: QRGTSSYFSYEWEVS*QHPQELALNSGGSF
Trigger: AAATGAACCACCGGAGTTCAATGCGAGTTCTTGGGGATGTTGTCAGGAGACCTCCCATTCATAGGAGAAGTATGAGCTGGTGCCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559486.2
CDS CCA 90 bp TTCTGGGCTCTGCTTGGAAGCCAGAAGAGATGCTGCATCAGGGCATaGCTCTATTGTACACCAGTTTTCTCGGTTTATCGCCTGGGTCAT +
Preference number: 5 (lower is better)
Translates to: FWALLGSQKRCCIRA*LYCTPVFSVYRLGH
Trigger: ATGACCCAGGCGATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAGAGCCCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
CDS-3UTR CAA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCCCTCCTCAACTATGCTaGACAAATCACAGGGACTTT +
Preference number: 5 (lower is better)
Translates to: SSSPDLHWQELLHMASPFPPQLC*TNHRDF
Trigger: AAAGTCCCTGTGATTTGTCAAGCATAGTTGAGGAGG...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTCTCAAATCTTTCCTTaGTACTTTCCCCTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLSQIFP*YFPLPE
Trigger: TTCAGGGAGGGGAAAGTACAAAGGAAAGATTTGAGA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGTCACTGTGTTCTGTaGACATGCAGAGTCTGCACA +
Preference number: 5 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESHCVL*TCRVCT
Trigger: TGTGCAGACTCTGCATGTCAACAGAACACAGTGACT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGTCAGAGCTTCTGGGATaGCTGGAGGGGCGGGACCCT +
Preference number: 5 (lower is better)
Translates to: KTITCTYEAITFSVILSRSELLG*LEGRDP
Trigger: AGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGA...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCGCTTTATCCTTATCTaGTTCCTGAGCTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KTRVVCARDGFRGKPVSERFILI*FLSCRA
Trigger: AGCTCTGCAGCTCAGGAACAAGATAAGGATAAAGCG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCCAGCGGCCTTGACTaGTTCGATGACAGCATCCAC +
Preference number: 5 (lower is better)
Translates to: MGCFVALVPETPRSRWCTSSGLD*FDDSIH
Trigger: GTGGATGCTGTCATCGAACAAGTCAAGGCCGCTGGA...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGATCTCTTGACCTGTTaGGCTTTAAAATCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNDLLTC*ALKSGR
Trigger: TCTCCCAGATTTTAAAGCCAAACAGGTCAAGAGATC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTTAATGAGATGGATTTaGTCAATGGAGAGGAAATGG +
Preference number: 5 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLLMRWI*SMERKW
Trigger: CCATTTCCTCTCCATTGACAAAATCCATCTCATTAA...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTGGAAGGGCCGTGAATaGTCCAATCCAGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: TMGCFVALVPETPRSRWCWKGRE*SNPGWL
Trigger: CAGCCATCCTGGATTGGACAATTCACGGCCCTTCCA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTAGATTAGCACTGGTATaGTGGAAGGTACTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTRLALV*WKVLWK
Trigger: CTTCCACAGTACCTTCCACAATACCAGTGCTAATCT...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGCATTCAGAATCTTTCTaGGAGGGGCTATGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRHSESF*EGLCGR
Trigger: CCTGCCACATAGCCCCTCCAAGAAAGATTCTGAATG...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGAAAGTGTGCCCGTaGACAGTCTTCTTATCTTTC +
Preference number: 5 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLKVCP*TVFLSF
Trigger: GAAAGATAAGAAGACTGTCAACGGGCACACTTTCAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCAAAAGCACTGCAATTaGCACAAGTATAGGCATCTT +
Preference number: 5 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAQKHCN*HKYRHL
Trigger: AAGATGCCTATACTTGTGCAAATTGCAGTGCTTTTG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGGACCGAGGACGCTCCTaGGGCTGTGAGGGCTTGTTT +
Preference number: 5 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRDRGRS*GCEGLF
Trigger: AAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGTC...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTATTTAGTGAGTCTGTaGAATGAGACAGGAATTTCC +
Preference number: 5 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLYLVSL*NETGIS
Trigger: GGAAATTCCTGTCTCATTCAACAGACTCACTAAATA...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCATGCTGTTTTAGAAACTaGCTGTCTATTATCCGACTC +
Preference number: 5 (lower is better)
Translates to: RASSSPDLHWQELLHMASCCFRN*LSIIRL
Trigger: GAGTCGGATAATAGACAGCAAGTTTCTAAAACAGCA...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCATATATTACTTCTaGCCGTTTGACCACATCTTT +
Preference number: 5 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTLIYYF*PFDHIF
Trigger: AAAGATGTGGTCAAACGGCAAGAAGTAATATATGAG...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGATTAAAGGTCCTCCTTaGAGAGCCTCTTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRIKGPP*RASSVL
Trigger: CAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAAT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGGGACCGACCACATCTaGCTCAATGGGGCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVIGTDHI*LNGAAD
Trigger: GTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCCC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCTGCCCTTCTGGTCCTTaGTTTGTCTGGCTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVCPSGP*FVWLVE
Trigger: TTCAACCAGCCAGACAAACAAAGGACCAGAAGGGCA...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGTCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLSSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQTQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTATCTAGTTCAACCCTaGCATGCACTAACACCTCCC +
Preference number: 5 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEYLVQP*HALTPP
Trigger: GGGAGGTGTTAGTGCATGCAAGGGTTGAACTAGATA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCAAATACTAAAATCCTaGGGAAGACCTGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNQILKS*GRPGYR
Trigger: TCTGTAGCCAGGTCTTCCCAAGGATTTTAGTATTTG...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS GCA 90 bp CAGGAAGTTCTCACATTCTGGGCTCTGCTTGGAAGCCAGAAGAGATaGTGCATCAGGGCATGGCTCTATTGTACACCAGTTTTCTCGGTT +
Preference number: 5 (lower is better)
Translates to: QEVLTFWALLGSQKR*CIRAWLYCTPVFSV
Trigger: AACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGTGAGAACTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
ENST00000560579.5
ENST00000560676.5
CDS GCA 90 bp CTCTTGACCTGTTTGGCTTTAAAATCTGGGAGAGAGACACATCACTaGCATGAGAAGAATGTCGGTCCAGTGAAGCCGTGTCATCGGTGG +
Preference number: 5 (lower is better)
Translates to: LLTCLALKSGRETHH*HEKNVGPVKPCHRW
Trigger: CCACCGATGACACGGCTTCACTGGACCGACATTCTTCTCATGGCAGTGATGTGTCTCTCTCCCAGATTTTAAAGCCAAACAGGTCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS GCA 90 bp GATGCCTCACAGAACAGTCTCCATACGGTATTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTCCAGCATTCTCCACATGGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: DASQNSLHTVFHRIN*SRSLVLQHSPHGCP
Trigger: TGGGCAGCCATGTGGAGAATGCTGGAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAATACCGTATGGAGACTGTTCTGTGAGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558811.2
CDS-3UTR CAA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTGTCGCCCCTTCCTGGTaGTGGATACTGAGAGCTCCG +
Preference number: 5 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIVAPSW*WILRAP
Trigger: CGGAGCTCTCAGTATCCACAACCAGGAAGGGGCGAC...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAAGACTGTCCATCTGCTaGAGGTTTGTTTTCATTAGT +
Preference number: 5 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAARLSIC*RFVFIS
Trigger: ACTAATGAAAACAAACCTCAAGCAGATGGACAGTCT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTGTTATCCACCACTTaGAAAGGACAAAAATCCGCA +
Preference number: 5 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQLLSTT*KGQKSA
Trigger: TGCGGATTTTTGTCCTTTCAAAGTGGTGGATAACAA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGAGTCAGTGTTCCCCTaGATATTCAGAGCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTESVFP*IFRASG
Trigger: CCCAGAAGCTCTGAATATCAAGGGGAACACTGACTC...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTGCTTCATCGTCTATTaGGGCTTCCTCAGCGTCACC +
Preference number: 5 (lower is better)
Translates to: TMGCFVALVPETPRSRWCCFIVY*GFLSVT
Trigger: GGTGACGCTGAGGAAGCCCAAATAGACGATGAAGCA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCTGGGTCATTGGGCCTaGCTTCATCTTCAGTGTAGC +
Preference number: 5 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWLGHWA*LHLQCS
Trigger: GCTACACTGAAGATGAAGCAAGGCCCAATGACCCAG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACATTATCGCCTGGGTCATaGGGCCTTGCTTCATCTTCA +
Preference number: 5 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTLSPGS*GLASSS
Trigger: TGAAGATGAAGCAAGGCCCAATGACCCAGGCGATAA...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTGATCTCTTGACCTGTTaGGCTTTAAAATCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIDLLTC*ALKSGR
Trigger: TCTCCCAGATTTTAAAGCCAAACAGGTCAAGAGATC...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCAAAAGCACTGCAATTaGCACAAGTATAGGCATCTT +
Preference number: 5 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCQKHCN*HKYRHL
Trigger: AAGATGCCTATACTTGTGCAAATTGCAGTGCTTTTG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTTGGGCTGTGAGGGCTaGTTTCTCATAATGACCGTG +
Preference number: 5 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALGCEG*FLIMTV
Trigger: CACGGTCATTATGAGAAACAAGCCCTCACAGCCCAA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGACATGTTCTCATCATaGCCAACTCCAGTAATGTTC +
Preference number: 5 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTDMFSS*PTPVMF
Trigger: GAACATTACTGGAGTTGGCAATGATGAGAACATGTC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAATTACTTCTTGCCGTTaGACCACATCTTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAITSCR*TTSFFC
Trigger: GCAAAAGAAAGATGTGGTCAAACGGCAAGAAGTAAT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAAATCCTCTGGAAGAATaGGCTATGGATACTGATCAG +
Preference number: 5 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPNPLEE*AMDTDQ
Trigger: CTGATCAGTATCCATAGCCAATTCTTCCAGAGGATT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGACATCCCCTATCCTCTaGATGAGAAAGTTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLTSPIL*MRKFFS
Trigger: TGAAAAGAACTTTCTCATCAAGAGGATAGGGGATGT...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTCCTGCTCCACTTCATaGTCTTTGGTACACTGCAAT +
Preference number: 5 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESCSTS*SLVHCN
Trigger: ATTGCAGTGTACCAAAGACAATGAAGTGGAGCAGGA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTTAAAGAGATCACTGTaGACTTCTGGTCCAATGATG +
Preference number: 5 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCLKRSL*TSGPMM
Trigger: CATCATTGGACCAGAAGTCAACAGTGATCTCTTTAA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCTTCTGGTCCTTTGTTaGTCTGGCTGGTTGAACTCA +
Preference number: 5 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWLLVLC*SGWLNS
Trigger: TGAGTTCAACCAGCCAGACAAACAAAGGACCAGAAG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACATGCCCTTCTGGTCCTTaGTTTGTCTGGCTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTCPSGP*FVWLVE
Trigger: TTCAACCAGCCAGACAAACAAAGGACCAGAAGGGCA...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPTQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGAATTGAAGGCCACGTaGGAAGCACAAAATTTTCCA +
Preference number: 5 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTELKAT*EAQNFP
Trigger: TGGAAAATTTTGTGCTTCCAACGTGGCCTTCAATTC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACCTCTTTGTGACCACTaGAAGCCCATTCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: MGCFVALVPETPRSRWCTPLCDH*KPIHQD
Trigger: GTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp TTTCTTCCTACAGGAACGGTCTGTATTCTCCTCCTCAACTATGCTTaGCAAATCACAGGGACTTTCAGTCTGTGCAACAGGGCTCCCTGG +
Preference number: 5 (lower is better)
Translates to: FLPTGTVCILLLNYA*QITGTFSLCNRAPW
Trigger: CCAGGGAGCCCTGTTGCACAGACTGAAAGTCCCTGTGATTTGTCAAGCATAGTTGAGGAGGAGAATACAGACCGTTCCTGTAGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000558166.2
ENST00000559362.5
CDS TCA 90 bp GACCTGTTTGGCTTTAAAATCTGGGAGAGAGACACATCACTGCCATaGGAAGAATGTCGGTCCAGTGAAGCCGTGTCATCGGTGGATGAA +
Preference number: 5 (lower is better)
Translates to: DLFGFKIWERDTSLP*EECRSSEAVSSVDE
Trigger: TTCATCCACCGATGACACGGCTTCACTGGACCGACATTCTTCTCATGGCAGTGATGTGTCTCTCTCCCAGATTTTAAAGCCAAACAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS TCA 90 bp GGGCTGCTAAAGAGAAAGAAAGTAAGTCCATTGACAATTCACCTCTaGCAAGCCCTGAGAAGCCGAGTAGGAAGGGAGCAAGCAGTTCAG +
Preference number: 5 (lower is better)
Translates to: GLLKRKKVSPLTIHL*QALRSRVGREQAVQ
Trigger: CTGAACTGCTTGCTCCCTTCCTACTCGGCTTCTCAGGGCTTGTCAGAGGTGAATTGTCAATGGACTTACTTTCTTTCTCTTTAGCAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559278.1
CDS GCA 90 bp TTCCAGTTTCTTCATTTCTGTTTCCACAGGACGAAAGGCCTTCCGTaGCCTTTACTCCACAATCAGGCAAGCTCTGAAGGCAGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: FQFLHFCFHRTKGLP*PLLHNQASSEGSCL
Trigger: AAGACAGCTGCCTTCAGAGCTTGCCTGATTGTGGAGTAAAGGGCACGGAAGGCCTTTCGTCCTGTGGAAACAGAAATGAAGAAACTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp TCCACCAGAGACTCCTTCTTCCGCTCCAGAATCCTCTGGAAGAATTaGCTATGGATACTGATCAGCTCATCCAAACAGGGGAACAGCTTT +
Preference number: 5 (lower is better)
Translates to: STRDSFFRSRILWKN*LWILISSSKQGNSF
Trigger: AAAGCTGTTCCCCTGTTTGGATGAGCTGATCAGTATCCATAGCCAATTCTTCCAGAGGATTCTGGAGCGGAAGAAGGAGTCTCTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000559820.1
ENST00000560579.5
ENST00000560676.5
CDS-3UTR CAA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAAAATTGTTGAGTATCTaGTCCAGGAGGTGGTGTTCT +
Preference number: 5 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIKLLSI*SRRWCS
Trigger: AGAACACCACCTCCTGGACAAGATACTCAACAATTT...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTTTTCATGAAATTGTaGAGTATCTTGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQFFMKL*SILSRR
Trigger: CCTCCTGGACAAGATACTCAACAATTTCATGAAAAA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCACATTCAGAATCTTTCTaGGAGGGGCTATGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSHSESF*EGLCGR
Trigger: CCTGCCACATAGCCCCTCCAAGAAAGATTCTGAATG...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGGAATTTCCAGGTGTTaGACATGTTCTCATCATTGC +
Preference number: 5 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIGISRC*TCSHHC
Trigger: GCAATGATGAGAACATGTCAAACACCTGGAAATTCC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGTTGACTCATTGACCTaGCTGATTTTATTTAGTGAG +
Preference number: 5 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCVDSLT*LILFSE
Trigger: CTCACTAAATAAAATCAGCAAGGTCAATGAGTCAAC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGAGATGCTGTTCCTTTTaGGGGACACTGAAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWRCCSF*GTLKVL
Trigger: CAGAACTTTCAGTGTCCCCAAAAAGGAACAGCATCT...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATCTCCTTCTTTTCCTTaGGCTTTGTTAACCCAAACA +
Preference number: 5 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPSPSFP*ALLTQT
Trigger: TGTTTGGGTTAACAAAGCCAAAGGAAAAGAAGGAGA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGTCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 5 (lower is better)
Translates to: KTITCTYEAITFSVILSRSSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGC +
Preference number: 5 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRIICCL*SRTWGR
Trigger: GCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAAGCACCAACCTCGTATaGTTCCAAACCCGGAGAACA +
Preference number: 5 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKSTNLV*FQTRRT
Trigger: TGTTCTCCGGGTTTGGAACAATACGAGGTTGGTGCT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAAGAGACCCTCTAACATaGATGTCAAGCTCTGTGGCG +
Preference number: 5 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKRDPLT*MSSSVA
Trigger: CGCCACAGAGCTTGACATCAATGTTAGAGGGTCTCT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAACTTTGATTTTAAACTaGTCCAACCAGAACCTGACC +
Preference number: 5 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPTLILN*SNQNLT
Trigger: GGTCAGGTTCTGGTTGGACAAGTTTAAAATCAAAGT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTTGAAAGTGGCAGTTaGCATGTTTTTAACCCTCTC +
Preference number: 5 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEVESGS*HVFNPL
Trigger: GAGAGGGTTAAAAACATGCAAACTGCCACTTTCAAC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCAAATACTAAAATCCTaGGGAAGACCTGGCTACAGA +
Preference number: 5 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEQILKS*GRPGYR
Trigger: TCTGTAGCCAGGTCTTCCCAAGGATTTTAGTATTTG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGCTGAGGCGGGTGGATaGCCTGAGCTCAGGAGTTCA +
Preference number: 5 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSAEAGG*PELRSS
Trigger: TGAACTCCTGAGCTCAGGCAATCCACCCGCCTCAGC...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS TCA 90 bp CCTTCTTCCGCTCCAGAATCCTCTGGAAGAATTGGCTATGGATACTaGTCAGCTCATCCAAACAGGGGAACAGCTTTTCTACCATCTGCT +
Preference number: 5 (lower is better)
Translates to: PSSAPESSGRIGYGY*SAHPNRGTAFLPSA
Trigger: AGCAGATGGTAGAAAAGCTGTTCCCCTGTTTGGATGAGCTGATCAGTATCCATAGCCAATTCTTCCAGAGGATTCTGGAGCGGAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000559820.1
ENST00000560579.5
ENST00000560676.5
CDS TCA 90 bp AGCTGGCATGGACTTCTACCATCTCTGGATCTGTCATCCCCATGCTaGTCAGGAATAAACCTTTCTCCTCATGTGCCACTTCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: SWHGLLPSLDLSSPC*SGINLSPHVPLLSQ
Trigger: TTGTGAGAGAAGTGGCACATGAGGAGAAAGGTTTATTCCTGATCAGCATGGGGATGACAGATCCAGAGATGGTAGAAGTCCATGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS TCA 90 bp TGCCCTTCTGGTCCTTTGTTTGTCTGGCTGGTTGAACTCAGTATGTaGAAAGGCCCCTTATCTTTGTGTGTCCGAGAGATGCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: CPSGPLFVWLVELSM*KGPLSLCVREMLFL
Trigger: AAGGAACAGCATCTCTCGGACACACAAAGATAAGGGGCCTTTTCACATACTGAGTTCAACCAGCCAGACAAACAAAGGACCAGAAGGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS TCA 90 bp ACCAGTTTTGGTGTGAATGCAGGCTGTGACAGGATCCTACTGAGGTaGTCACAAGCAATGCCCACAGTGATACTCACTTTGCTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TSFGVNAGCDRILLR*SQAMPTVILTLLFL
Trigger: CAAGAAGAGCAAAGTGAGTATCACTGTGGGCATTGCTTGTGATCACCTCAGTAGGATCCTGTCACAGCCTGCATTCACACCAAAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000558092.1
ENST00000560957.1
CDS GCA 90 bp GATGCCTCACAGAACAGTCTCCATACGGTATTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTCCAGCATTCTCCTCGGTTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: DASQNSLHTVFHRIN*SRSLVLQHSPRLEA
Trigger: AGCTTCTAACCGAGGAGAATGCTGGAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAATACCGTATGGAGACTGTTCTGTGAGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp GAAGTTCTCACATTCTGGGCTCTGCTTGGAAGCCAGAAGAGATGCTaGATCAGGGCATGGCTCTATTGTACACCAGTTTTCTCGGTTTAT +
Preference number: 5 (lower is better)
Translates to: EVLTFWALLGSQKRC*IRAWLYCTPVFSVY
Trigger: ATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGTGAGAACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
ENST00000560579.5
ENST00000560676.5
CDS GCA 90 bp CCAGTAATGTTCTGTATGGAGACACTTTTGGAGAGCGAGACACTCTaGTGGGATCGTCTATTGGCAAATATTGGGGTGGTAGCGGTTTCA +
Preference number: 5 (lower is better)
Translates to: PVMFCMETLLESETL*WDRLLANIGVVAVS
Trigger: TGAAACCGCTACCACCCCAATATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATACAGAACATTACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559278.1
ENST00000560482.5
ENST00000560579.5
ENST00000560676.5
CDS GCA 90 bp GATGCCTCACAGAACAGTCTCCATACGGTATTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTCCAGCATTCTCCGTTTCTCTCTCAG +
Preference number: 5 (lower is better)
Translates to: DASQNSLHTVFHRIN*SRSLVLQHSPFLSQ
Trigger: CTGAGAGAGAAACGGAGAATGCTGGAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAATACCGTATGGAGACTGTTCTGTGAGGCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558166.2
CDS GCA 90 bp ATTCAGATAGTTTATTTCCACGGAGCAATAGCGGTTTCTCTTTGCTaGCTCGGAACATGGTTACCCACAGATGGAACAGGCTGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: IQIVYFHGAIAVSLC*LGTWLPTDGTGCCV
Trigger: CACACAGCAGCCTGTTCCATCTGTGGGTAACCATGTTCCGAGGCAGCAAAGAGAAACCGCTATTGCTCCGTGGAAATAAACTATCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560340.5
CDS CCA 90 bp AATGAAAGTCTTCTTCAGCCACCACAAACACGGGAAGGCCCTCTTTaGAAGCACAGAGCTGCACCTTCACTGTTTCACAACAATCATGAC +
Preference number: 5 (lower is better)
Translates to: NESLLQPPQTREGPL*KHRAAPSLFHNNHD
Trigger: GTCATGATTGTTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCGTGTTTGTGGTGGCTGAAGAAGACTTTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560302.5
CDS CCA 90 bp TTGTCCTGTAGAGCCACTGGCAAACCTAGAACGGCATTCTTCTCTTaGCTCAACAAGACGTTTGGAATCAGGATGTCTTGGGTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: LSCRATGKPRTAFFS*LNKTFGIRMSWVLC
Trigger: ACACAACACCCAAGACATCCTGATTCCAAACGTCTTGTTGAGCCAAGAGAAGAATGCCGTTCTAGGTTTGCCAGTGGCTCTACAGGACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp GTAATGTTCTGTATGGAGACACTTTTGGAGAGCGAGACACTCTGCTaGGATCGTCTATTGGCAAATATTGGGGTGGTAGCGGTTTCATCC +
Preference number: 5 (lower is better)
Translates to: VMFCMETLLESETLC*DRLLANIGVVAVSS
Trigger: GGATGAAACCGCTACCACCCCAATATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATACAGAACATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559278.1
ENST00000560482.5
ENST00000560579.5
ENST00000560676.5
CDS CCA 90 bp AGAGACTCCTTCTTCCGCTCCAGAATCCTCTGGAAGAATTGGCTATaGATACTGATCAGCTCATCCAAACAGGGGAACAGCTTTTCTACC +
Preference number: 5 (lower is better)
Translates to: RDSFFRSRILWKNWL*ILISSSKQGNSFST
Trigger: GGTAGAAAAGCTGTTCCCCTGTTTGGATGAGCTGATCAGTATCCATAGCCAATTCTTCCAGAGGATTCTGGAGCGGAAGAAGGAGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000559820.1
ENST00000560579.5
ENST00000560676.5
CDS CCA 90 bp TTCTGGGCTCTGCTTGGAAGCCAGAAGAGATGCTGCATCAGGGCATaGCTCTATTGTACACCAGTTTTCTCGGTTTATCTTCAGCAATAC +
Preference number: 5 (lower is better)
Translates to: FWALLGSQKRCCIRA*LYCTPVFSVYLQQY
Trigger: GTATTGCTGAAGATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAGAGCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000560676.5
CDS CCA 90 bp TGGGGACCAGTGCAAGTCCTTAGTTCCAAATTTCTCACGGTTAGGTaGTGGAGATCTCTGCCTTCCAGACTCCTCTCTATTAAAACTCTC +
Preference number: 5 (lower is better)
Translates to: WGPVQVLSSKFLTVR*WRSLPSRLLSIKTL
Trigger: GAGAGTTTTAATAGAGAGGAGTCTGGAAGGCAGAGATCTCCACCACCTAACCGTGAGAAATTTGGAACTAAGGACTTGCACTGGTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560676.5
CDS-3UTR CAA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAACCTCCTCAACTATGCTaGACAAATCACAGGGACTTT +
Preference number: 5 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQPPQLC*TNHRDF
Trigger: AAAGTCCCTGTGATTTGTCAAGCATAGTTGAGGAGG...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGAAGACTCAGCAGGTTaGTTACCATCCAGGGAACTG +
Preference number: 5 (lower is better)
Translates to: YADRSPCTYTDQVQNICCEDSAG*LPSREL
Trigger: CAGTTCCCTGGATGGTAACAAACCTGCTGAGTCTTC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTAATCTGAGGGTGACATaGCCTCACCTATGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSANLRVT*PHLCLL
Trigger: CAGCAGGCATAGGTGAGGCAATGTCACCCTCAGATT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTGCTTCATCGTCTATTaGGGCTTCCTCAGCGTCACC +
Preference number: 5 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSACFIVY*GFLSVT
Trigger: GGTGACGCTGAGGAAGCCCAAATAGACGATGAAGCA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGAGTGCTCCAGCGGCCTaGACTTGTTCGATGACAGCA +
Preference number: 5 (lower is better)
Translates to: KTITCTYEAITFSVILSRSAPAA*TCSMTA
Trigger: TGCTGTCATCGAACAAGTCAAGGCCGCTGGAGCACT...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCAGGGCATGGCTCTATaGTACACCAGTTTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLQGMAL*YTSFLG
Trigger: ACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACAGGGCATGGCTCTATaGTACACCAGTTTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTQGMAL*YTSFLG
Trigger: ACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTTAATGAGATGGATTTaGTCAATGGAGAGGAAATGG +
Preference number: 5 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRLMRWI*SMERKW
Trigger: CCATTTCCTCTCCATTGACAAAATCCATCTCATTAA...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAGATTAGCACTGGTATaGTGGAAGGTACTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQRLALV*WKVLWK
Trigger: CTTCCACAGTACCTTCCACAATACCAGTGCTAATCT...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGCTGTGAGGGCTaGTTTCTCATAATGACCGTG +
Preference number: 5 (lower is better)
Translates to: YADRSPCTYTDQVQNICCLGCEG*FLIMTV
Trigger: CACGGTCATTATGAGAAACAAGCCCTCACAGCCCAA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGTTGACTCATTGACCTaGCTGATTTTATTTAGTGAG +
Preference number: 5 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTVDSLT*LILFSE
Trigger: CTCACTAAATAAAATCAGCAAGGTCAATGAGTCAAC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTCATATATTACTTCTaGCCGTTTGACCACATCTTT +
Preference number: 5 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLIYYF*PFDHIF
Trigger: AAAGATGTGGTCAAACGGCAAGAAGTAATATATGAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGAATCCTCTGGAAGAATaGGCTATGGATACTGATCAG +
Preference number: 5 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWNPLEE*AMDTDQ
Trigger: CTGATCAGTATCCATAGCCAATTCTTCCAGAGGATT...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCCTTCTCGCCTCCTTTaGAAGCATTCATCTGATGGC +
Preference number: 5 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLPSRLL*KHSSDG
Trigger: GCCATCAGATGAATGCTTCAAAAGGAGGCGAGAAGG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCGTTCTCCTAAGATCTaGGCCATCATCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLRSPKI*AIISLF
Trigger: GAAGAGGGAGATGATGGCCAAGATCTTAGGAGAACG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTCGTTCTCCTAAGATCTaGGCCATCATCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: YADRSPCTYTDQVQNICCRSPKI*AIISLF
Trigger: GAAGAGGGAGATGATGGCCAAGATCTTAGGAGAACG...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGGGATCCTCATCAGCTaGGTATGTGGATGGGAAACC +
Preference number: 5 (lower is better)
Translates to: FQPLGIPDVSKTITCTYEGILIS*VCGWET
Trigger: GGTTTCCCATCCACATACCAAGCTGATGAGGATCCC...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGGGATCCTCATCAGCTaGGTATGTGGATGGGAAACC +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVIGILIS*VCGWET
Trigger: GGTTTCCCATCCACATACCAAGCTGATGAGGATCCC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGAAAAATCAGCAGGTTTaGGCCTTTGGTCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRKNQQV*AFGLFL
Trigger: CAGAAACAGACCAAAGGCCAAAACCTGCTGATTTTT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAATTCCGGGCACTACTTaGATTTTAAACTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIIPGTT*ILNLSN
Trigger: GTTGGACAAGTTTAAAATCAAAGTAGTGCCCGGAAT...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGAATACTGGCAAAGGTaGAAAGTGGCAGTTTGCATG +
Preference number: 5 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTEYWQR*KVAVCM
Trigger: CATGCAAACTGCCACTTTCAACCTTTGCCAGTATTC...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp ATCTTGTCCAGGAGGTGGTGTTCTCTGCTCTTCCTGCAAAGTTCCTaGAGAGAGAGCATTTTCCTTAATAGAGGAACAGGTCACCGCTTT +
Preference number: 5 (lower is better)
Translates to: ILSRRWCSLLFLQSS*RESIFLNRGTGHRF
Trigger: AAAGCGGTGACCTGTTCCTCTATTAAGGAAAATGCTCTCTCTTCAGGAACTTTGCAGGAAGAGCAGAGAACACCACCTCCTGGACAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp CCAGCCCAAGAAGGGCTAAATCTGAGGGTGACATTGCCTCACCTATaGCTGCTGCTAAGAGAGTATAAGGTTCTAATCCATCTGAAATCT +
Preference number: 5 (lower is better)
Translates to: PAQEGLNLRVTLPHL*LLLREYKVLIHLKS
Trigger: AGATTTCAGATGGATTAGAACCTTATACTCTCTTAGCAGCAGGCATAGGTGAGGCAATGTCACCCTCAGATTTAGCCCTTCTTGGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp GGGAGGGGACAAAAGAAAGTGCGTCATCCTTGGTTACTGATTCACTaGCTGGACTGTTTGCCAGAGAGAAAGTACTGTCTGATATTACTG +
Preference number: 5 (lower is better)
Translates to: GRGQKKVRHPWLLIH*LDCLPERKYCLILL
Trigger: CAGTAATATCAGACAGTACTTTCTCTCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCAAGGATGACGCACTTTCTTTTGTCCCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp TCAGTCAAAACTGAATCTAAAGCCAAAGTGGCCTTACCCACACTTTaGAGGGAAGAGTCAGTGTTCCCCTTGATATTCAGAGCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SVKTESKAKVALPTL*REESVFPLIFRASG
Trigger: CCCAGAAGCTCTGAATATCAAGGGGAACACTGACTCTTCCCTGCAAAGTGTGGGTAAGGCCACTTTGGCTTTAGATTCAGTTTTGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp CCTGGACTGTTTGCCAGAGAGAAAGTACTGTCTGATATTACTGCCTaGTCTGGCACCAGTTCTTTCTCCATTTTAGGGACAACTGGATGT +
Preference number: 5 (lower is better)
Translates to: PGLFAREKVLSDITA*SGTSSFSILGTTGC
Trigger: ACATCCAGTTGTCCCTAAAATGGAGAAAGAACTGGTGCCAGACCAGGCAGTAATATCAGACAGTACTTTCTCTCTGGCAAACAGTCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS-3UTR CAA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGATTTCCAGCACTGGTaGCTAGGAATTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: YADRSPCTYTDQVQNICCDFQHW*LGIELH
Trigger: ATGCAGCTCAATTCCTAGCAACCAGTGCTGGAAATC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTTTCACATCTTTTCGTaGGCCTTTGTTATCCACCAC +
Preference number: 5 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAFHIFS*AFVIHH
Trigger: GTGGTGGATAACAAAGGCCAACGAAAAGATGTGAAA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATCCAGCGGCCTTGACTaGTTCGATGACAGCATCCAC +
Preference number: 5 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLSSGLD*FDDSIH
Trigger: GTGGATGCTGTCATCGAACAAGTCAAGGCCGCTGGA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGGCTTTGCCGATCTCTaGACCTGTTTGGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: MGCFVALVPETPRSRWCTGFADL*TCLALK
Trigger: TTTTAAAGCCAAACAGGTCAAGAGATCGGCAAAGCC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCAGAGATGAGGATGGCTaGTTTCCGACACCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPRDEDG*FPTPAP
Trigger: AGGAGCTGGTGTCGGAAACAAGCCATCCTCATCTCT...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACTTGGGCTGCTTCATTTaGACCTTTGCACAGGAGGCT +
Preference number: 5 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYLGCFI*TFAQEA
Trigger: AGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCCAA...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGTGTATGGAGACACTTTaGGAGAGCGAGACACTCTGC +
Preference number: 5 (lower is better)
Translates to: FQPLGIPDVSKTITCTYECMETL*ESETLC
Trigger: GCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATACA...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATCCACTTCATTGTCTTaGGTACACTGCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGISTSLS*VHCNIL
Trigger: AAGAATATTGCAGTGTACCAAAGACAATGAAGTGGA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCTGTTTCGTTCCTCTTaGGAGCTGGCATGGACTTCT +
Preference number: 5 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSALFRSS*ELAWTS
Trigger: AGAAGTCCATGCCAGCTCCAAAGAGGAACGAAACAG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCGTTCTCCTAAGATCTaGGCCATCATCTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSARSPKI*AIISLF
Trigger: GAAGAGGGAGATGATGGCCAAGATCTTAGGAGAACG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCAAAGGCCCCTTATCTTaGTGTGTCCGAGAGATGCTG +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVIKGPLS*CVREML
Trigger: CAGCATCTCTCGGACACACAAAGATAAGGGGCCTTT...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTTCTCCTTCTTTTCCTTaGGCTTTGTTAACCCAAACA +
Preference number: 5 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCSPSFP*ALLTQT
Trigger: TGTTTGGGTTAACAAAGCCAAAGGAAAAGAAGGAGA...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: TMGCFVALVPETPRSRWCRFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKRFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTCCTGACCAAATCGTTTaGAGTGGGGTCTGGGCAGAT +
Preference number: 5 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIPDQIV*SGVWAD
Trigger: ATCTGCCCAGACCCCACTCAAAACGATTTGGTCAGG...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGATGAAGTTGGGTGGTTaGAGGGAATTCCGGGCACTA +
Preference number: 5 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRMKLGG*REFRAL
Trigger: TAGTGCCCGGAATTCCCTCAAACCACCCAACTTCAT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp TCTGAAATCTTGTCTTTTGCAGCAGCTGGAATCACCACAGAATTCTaGTCTACTGGAGCATCAGCACTCTCCTCACGACTTCGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: SEILSFAAAGITTEF*STGASALSSRLREV
Trigger: AACTTCACGAAGTCGTGAGGAGAGTGCTGATGCTCCAGTAGATCAGAATTCTGTGGTGATTCCAGCTGCTGCAAAAGACAAGATTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 90 bp TCTGCCTTAAGAAAGGCAGAGGATGCACCCGGTGAATTACTTAGCTaGAGTGCTTTGTCCTTGGCACAGTCAGCTGAGATTGATTTTTCA +
Preference number: 5 (lower is better)
Translates to: SALRKAEDAPGELLS*SALSLAQSAEIDFS
Trigger: TGAAAAATCAATCTCAGCTGACTGTGCCAAGGACAAAGCACTTCAGCTAAGTAATTCACCGGGTGCATCCTCTGCCTTTCTTAAGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 90 bp GAGGTCAGAATCACTCCCAGATTCTCTTTTAAGTACACCTTGTTTTaGGGTACACTCTCTGCCCAGTCCAACATCCAGGAAGTTCTCACA +
Preference number: 5 (lower is better)
Translates to: EVRITPRFSFKYTLF*GTLSAQSNIQEVLT
Trigger: TGTGAGAACTTCCTGGATGTTGGACTGGGCAGAGAGTGTACCTCAAAACAAGGTGTACTTAAAAGAGAATCTGGGAGTGATTCTGACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
ENST00000560579.5
ENST00000560676.5
CDS TCA 90 bp TCTGGCTTTGGGAAGATGATGCTGTCCATGTCATCACTGGGTGAGTaGAAGAGGTCAGAATCACTCCCAGATTCTCTTTTAAGTACACCT +
Preference number: 5 (lower is better)
Translates to: SGFGKMMLSMSSLGE*KRSESLPDSLLSTP
Trigger: AGGTGTACTTAAAAGAGAATCTGGGAGTGATTCTGACCTCTTTCACTCACCCAGTGATGACATGGACAGCATCATCTTCCCAAAGCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560579.5
ENST00000560676.5
CDS TCA 90 bp TTCCTCTGGCTTTGGGAAGATGATGCTGTCCATGTCATCACTGGGTaGGTGAAAGAGGTCAGAATCACTCCCAGATTCTCTTTTAAGTAC +
Preference number: 5 (lower is better)
Translates to: FLWLWEDDAVHVITG*VKEVRITPRFSFKY
Trigger: GTACTTAAAAGAGAATCTGGGAGTGATTCTGACCTCTTTCACTCACCCAGTGATGACATGGACAGCATCATCTTCCCAAAGCCAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560579.5
ENST00000560676.5
CDS GCA 90 bp TATTTTTCTTCCTACAGGAACGGTCTGTATTCTCCTCCTCAACTATaGTTGACAAATCACAGGGACTTTCAGTCTGTGCAACAGGGCTCC +
Preference number: 5 (lower is better)
Translates to: YFSSYRNGLYSPPQL*LTNHRDFQSVQQGS
Trigger: GGAGCCCTGTTGCACAGACTGAAAGTCCCTGTGATTTGTCAAGCATAGTTGAGGAGGAGAATACAGACCGTTCCTGTAGGAAGAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp GCACAGTTTGGAACACTGATTTTATCCACAGGCTTACTTGTGACGTaGACGTCAGAGGCTCCAGCTGTGCCAATATTAGAGTTCTCAAAT +
Preference number: 5 (lower is better)
Translates to: AQFGTLILSTGLLVT*TSEAPAVPILEFSN
Trigger: ATTTGAGAACTCTAATATTGGCACAGCTGGAGCCTCTGACGTGCACGTCACAAGTAAGCCTGTGGATAAAATCAGTGTTCCAAACTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp TGCTGTGGTGCTTTCGGACTCGCTAACTATGTTATCACACAGTTTTaGAACCAAATCGCCACTAGAAGTCACTGTGTTCTGTTGACATGC +
Preference number: 5 (lower is better)
Translates to: CCGAFGLANYVITQF*NQIATRSHCVLLTC
Trigger: GCATGTCAACAGAACACAGTGACTTCTAGTGGCGATTTGGTTGCAAAACTGTGTGATAACATAGTTAGCGAGTCCGAAAGCACCACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp TGCATGTTAGCATGCTATGTGATTTGTAGCATGGTTATCAAGCCATaGCTACGGCACACCAGCTCTTCACTAATTCTAGTCCTGGAAGGT +
Preference number: 5 (lower is better)
Translates to: CMLACYVICSMVIKP*LRHTSSSLILVLEG
Trigger: ACCTTCCAGGACTAGAATTAGTGAAGAGCTGGTGTGCCGTAGGCATGGCTTGATAACCATGCTACAAATCACATAGCATGCTAACATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559391.1
CDS GCA 90 bp TTTATTCAGATAGTTTATTTCCACGGAGCAATAGCGGTTTCTCTTTaGTGCCTCGGAACATGGTTACCCACAGATGGAACAGGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FIQIVYFHGAIAVSL*CLGTWLPTDGTGCC
Trigger: ACAGCAGCCTGTTCCATCTGTGGGTAACCATGTTCCGAGGCAGCAAAGAGAAACCGCTATTGCTCCGTGGAAATAAACTATCTGAATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560340.5
CDS CCA 90 bp GCATTCTTCTCTTGGCTCAACAAGACGTTTGGAATCAGGATGTCTTaGGTGTTGTGTGATATATTCTCTCTTCTGGGCTCAGCCATACCT +
Preference number: 5 (lower is better)
Translates to: AFFSWLNKTFGIRMS*VLCDIFSLLGSAIP
Trigger: AGGTATGGCTGAGCCCAGAAGAGAGAATATATCACACAACACCCAAGACATCCTGATTCCAAACGTCTTGTTGAGCCAAGAGAAGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCACATCATCTTCAGCTTaGTCCTCTTCAGCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVITSSSA*SSSASS
Trigger: GCTGCTTGCTGAAGAGGACAAAGCTGAAGATGATGT...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGAGCATGAGATGAATTaGTTTCTGAGTTCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: MGCFVALVPETPRSRWCTEHEMN*FLSSGV
Trigger: CACACCAGAACTCAGAAACAAATTCATCTCATGCTC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAGGCTCAACAAGACGTTaGGAATCAGGATGTCTTGGG +
Preference number: 5 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTGSTRR*ESGCLG
Trigger: CCCAAGACATCCTGATTCCAAACGTCTTGTTGAGCC...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCAGGGCATGGCTCTATaGTACACCAGTTTTCTCGGT +
Preference number: 5 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNQGMAL*YTSFLG
Trigger: ACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGGCTTTGCCGATCTCTaGACCTGTTTGGCTTTAAAA +
Preference number: 5 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLGFADL*TCLALK
Trigger: TTTTAAAGCCAAACAGGTCAAGAGATCGGCAAAGCC...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGAGATTAGCACTGGTATaGTGGAAGGTACTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLRLALV*WKVLWK
Trigger: CTTCCACAGTACCTTCCACAATACCAGTGCTAATCT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAACAAAAGCACTGCAATTaGCACAAGTATAGGCATCTT +
Preference number: 5 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQQKHCN*HKYRHL
Trigger: AAGATGCCTATACTTGTGCAAATTGCAGTGCTTTTG...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCTTTCTCGGCAGCCTTaGTGGACAAAAGCACTGCAA +
Preference number: 5 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPLSRQP*WTKALQ
Trigger: TTGCAGTGCTTTTGTCCACAAAGGCTGCCGAGAAAG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTCCAATGACCCTGATTaGGCTATGGAAGGTGCAGAT +
Preference number: 5 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRSNDPD*AMEGAD
Trigger: ATCTGCACCTTCCATAGCCAAATCAGGGTCATTGGA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTAGATGCTGTTCCTTTTaGGGGACACTGAAAGTTCTG +
Preference number: 5 (lower is better)
Translates to: YADRSPCTYTDQVQNICCRCCSF*GTLKVL
Trigger: CAGAACTTTCAGTGTCCCCAAAAAGGAACAGCATCT...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSTQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 5 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFRFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACGTGATTTCTTTAGCTaGATGGAGAACATGGTGTCC +
Preference number: 5 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTRDFFS*MENMVS
Trigger: GGACACCATGTTCTCCATCAAGCTAAAGAAATCACG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp CCAATATTAGAGTTCTCAAATCTTTCCTTTGTACTTTCCCCTCCCTaGAGCACATTCTTCCAAACAGTGGCATCTGGGTTCATGAGCCCA +
Preference number: 5 (lower is better)
Translates to: PILEFSNLSFVLSPP*STFFQTVASGFMSP
Trigger: TGGGCTCATGAACCCAGATGCCACTGTTTGGAAGAATGTGCTTCAGGGAGGGGAAAGTACAAAGGAAAGATTTGAGAACTCTAATATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 90 bp ACTTGCTGTCTATTATCCGACTCCAAGACTCTGCTTCCAGCTGTTTaGACTCAATCTCAAAGTCTCCCAGTAGTTGTCCTTCATTCATGT +
Preference number: 5 (lower is better)
Translates to: TCCLLSDSKTLLPAV*TQSQSLPVVVLHSC
Trigger: ACATGAATGAAGGACAACTACTGGGAGACTTTGAGATTGAGTCCAAACAGCTGGAAGCAGAGTCTTGGAGTCGGATAATAGACAGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS-3UTR CAA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAACATCATCTTCAGCTTaGTCCTCTTCAGCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQTSSSA*SSSASS
Trigger: GCTGCTTGCTGAAGAGGACAAAGCTGAAGATGATGT...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CAA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACGATTTCCAGCACTGGTaGCTAGGAATTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNDFQHW*LGIELH
Trigger: ATGCAGCTCAATTCCTAGCAACCAGTGCTGGAAATC...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGAGCATGAGATGAATTaGTTTCTGAGTTCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFEHEMN*FLSSGV
Trigger: CACACCAGAACTCAGAAACAAATTCATCTCATGCTC...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAATTTTTCATGAAATTGTaGAGTATCTTGTCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQFFMKL*SILSRR
Trigger: CCTCCTGGACAAGATACTCAACAATTTCATGAAAAA...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATGTGGGGCCACTTCCTaGTTATGTTCAGTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLCGATS*LCSVSA
Trigger: GGCAGAAACTGAACATAACAAGGAAGTGGCCCCACA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGTTGACTCATTGACCTaGCTGATTTTATTTAGTGAG +
Preference number: 5 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAVDSLT*LILFSE
Trigger: CTCACTAAATAAAATCAGCAAGGTCAATGAGTCAAC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAAATCCTCTGGAAGAATaGGCTATGGATACTGATCAG +
Preference number: 5 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTNPLEE*AMDTDQ
Trigger: CTGATCAGTATCCATAGCCAATTCTTCCAGAGGATT...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCTTCTTTACAAAGGCTaGAAAACGCTTATCCTTGGC +
Preference number: 5 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFLLYKG*KTLILG
Trigger: GCCAAGGATAAGCGTTTTCAAGCCTTTGTAAAGAAG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGAGTGAGAAGAACTGCTaGAACCTCTTTCAACCTTCC +
Preference number: 5 (lower is better)
Translates to: FQPLGIPDVSKTITCTYESEKNC*NLFQPS
Trigger: GGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCACT...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTTAAAGAGATCACTGTaGACTTCTGGTCCAATGATG +
Preference number: 5 (lower is better)
Translates to: TMGCFVALVPETPRSRWCLKRSL*TSGPMM
Trigger: CATCATTGGACCAGAAGTCAACAGTGATCTCTTTAA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTATTAAAGGTCCTCCTTaGAGAGCCTCTTCTGTGTTG +
Preference number: 5 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAIKGPP*RASSVL
Trigger: CAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAAT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATGCCCTTCTGGTCCTTaGTTTGTCTGGCTGGTTGAA +
Preference number: 5 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLCPSGP*FVWLVE
Trigger: TTCAACCAGCCAGACAAACAAAGGACCAGAAGGGCA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCATTCCGGGCACTACTTaGATTTTAAACTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: TMGCFVALVPETPRSRWCIPGTT*ILNLSN
Trigger: GTTGGACAAGTTTAAAATCAAAGTAGTGCCCGGAAT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTTATCTAGTTCAACCCTaGCATGCACTAACACCTCCC +
Preference number: 5 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIYLVQP*HALTPP
Trigger: GGGAGGTGTTAGTGCATGCAAGGGTTGAACTAGATA...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTTCCCTGCCCTCTTCTTaGTCTCTGAGGATGGACGAG +
Preference number: 5 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCSLPSS*SLRMDE
Trigger: CTCGTCCATCCTCAGAGACAAAGAAGAGGGCAGGGA...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS TCA 90 bp CACAGTTTTGCAACCAAATCGCCACTAGAAGTCACTGTGTTCTGTTaGCATGCAGAGTCTGCACAAAGTTTATCGTCTCCAGTTGTAGAA +
Preference number: 5 (lower is better)
Translates to: HSFATKSPLEVTVFC*HAESAQSLSSPVVE
Trigger: TTCTACAACTGGAGACGATAAACTTTGTGCAGACTCTGCATGTCAACAGAACACAGTGACTTCTAGTGGCGATTTGGTTGCAAAACTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 90 bp TATCTAGTTTCACATCTTTTCGTTGGCCTTTGTTATCCACCACTTTaGAAGGACAAAAATCCGCACGTTCCTGGGTATCCCTTACAGGGT +
Preference number: 5 (lower is better)
Translates to: YLVSHLFVGLCYPPL*KDKNPHVPGYPLQG
Trigger: ACCCTGTAAGGGATACCCAGGAACGTGCGGATTTTTGTCCTTTCAAAGTGGTGGATAACAAAGGCCAACGAAAAGATGTGAAACTAGATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 90 bp TCCTTAATAGAGGAACAGGTCACCGCTTTATCCTTATCTTGTTCCTaGGCTGCAGAGCTTTCTGAAACCACCAGAAGTTTTCCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SLIEEQVTALSLSCS*AAELSETTRSFPSS
Trigger: TGAAGAAGGAAAACTTCTGGTGGTTTCAGAAAGCTCTGCAGCTCAGGAACAAGATAAGGATAAAGCGGTGACCTGTTCCTCTATTAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 90 bp TTAAAGTGTGTTTGTAGATCATATAAATTCTCACCATGCAAACTCTaGTCTGTCCCCAATACATTCCACTCCGTGGGCAGCTTCAGGTGC +
Preference number: 5 (lower is better)
Translates to: LKCVCRSYKFSPCKL*SVPNTFHSVGSFRC
Trigger: GCACCTGAAGCTGCCCACGGAGTGGAATGTATTGGGGACAGATCAGAGTTTGCATGGTGAGAATTTATATGATCTACAAACACACTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CAA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACTCTCAAATCTTTCCTTaGTACTTTCCCCTCCCTGAA +
Preference number: 5 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYSQIFP*YFPLPE
Trigger: TTCAGGGAGGGGAAAGTACAAAGGAAAGATTTGAGA...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTACGCTTTATCCTTATCTaGTTCCTGAGCTGCAGAGCT +
Preference number: 5 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLRFILI*FLSCRA
Trigger: AGCTCTGCAGCTCAGGAACAAGATAAGGATAAAGCG...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAAGGATGTCTTGGGTGTaGTGTGATATATTCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTRMSWV*CDIFSL
Trigger: AAGAGAGAATATATCACACAACACCCAAGACATCCT...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCTGAAAGTGTGCCCGTaGACAGTCTTCTTATCTTTC +
Preference number: 5 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNLKVCP*TVFLSF
Trigger: GAAAGATAAGAAGACTGTCAACGGGCACACTTTCAG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTTCTTTACAAAGGCTaGAAAACGCTTATCCTTGGC +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVILLYKG*KTLILG
Trigger: GCCAAGGATAAGCGTTTTCAAGCCTTTGTAAAGAAG...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCTGTTTGTCTGGCTGGTaGAACTCAGTATGTGAAAAG +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVICLSGW*NSVCEK
Trigger: CTTTTCACATACTGAGTTCAACCAGCCAGACAAACA...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTGTTTGTCTGGCTGGTaGAACTCAGTATGTGAAAAG +
Preference number: 5 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRCLSGW*NSVCEK
Trigger: CTTTTCACATACTGAGTTCAACCAGCCAGACAAACA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCATCTGCAAGGCCAGCTaGCAATTCATCAATAAGCAC +
Preference number: 5 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPICKAS*QFINKH
Trigger: GTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGAT...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAAATTTGGTTTGGCCTTaGTTAGCACTGCTTGAGCAA +
Preference number: 5 (lower is better)
Translates to: ISGLPNRSIGLELRRETGNLVWP*LALLEQ
Trigger: TTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATT...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS CCA 90 bp CAGAGGATGCACCCGGTGAATTACTTAGCTGAAGTGCTTTGTCCTTaGCACAGTCAGCTGAGATTGATTTTTCATGAAATTGTTGAGTAT +
Preference number: 5 (lower is better)
Translates to: QRMHPVNYLAEVLCP*HSQLRLIFHEIVEY
Trigger: ATACTCAACAATTTCATGAAAAATCAATCTCAGCTGACTGTGCCAAGGACAAAGCACTTCAGCTAAGTAATTCACCGGGTGCATCCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS-3UTR CAA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGAGATTTCCAGCACTGGTaGCTAGGAATTGAGCTGCAT +
Preference number: 5 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRDFQHW*LGIELH
Trigger: ATGCAGCTCAATTCCTAGCAACCAGTGCTGGAAATC...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCAGACTGTCCATCTGCTaGAGGTTTGTTTTCATTAGT +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVIRLSIC*RFVFIS
Trigger: ACTAATGAAAACAAACCTCAAGCAGATGGACAGTCT...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTCTTTTCGTTGGCCTTaGTTATCCACCACTTTGAAA +
Preference number: 5 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRSFRWP*LSTTLK
Trigger: TTTCAAAGTGGTGGATAACAAAGGCCAACGAAAAGA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTGATCTCTTGACCTGTTaGGCTTTAAAATCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIDLLTC*ALKSGR
Trigger: TCTCCCAGATTTTAAAGCCAAACAGGTCAAGAGATC...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTACTGAAAGTGTGCCCGTaGACAGTCTTCTTATCTTTC +
Preference number: 5 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLLKVCP*TVFLSF
Trigger: GAAAGATAAGAAGACTGTCAACGGGCACACTTTCAG...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTATTTAGTGAGTCTGTaGAATGAGACAGGAATTTCC +
Preference number: 5 (lower is better)
Translates to: YADRSPCTYTDQVQNICCYLVSL*NETGIS
Trigger: GGAAATTCCTGTCTCATTCAACAGACTCACTAAATA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACATTACTTCTTGCCGTTaGACCACATCTTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYITSCR*TTSFFC
Trigger: GCAAAAGAAAGATGTGGTCAAACGGCAAGAAGTAAT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGATTACTTCTTGCCGTTaGACCACATCTTTCTTTTGC +
Preference number: 5 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRITSCR*TTSFFC
Trigger: GCAAAAGAAAGATGTGGTCAAACGGCAAGAAGTAAT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTTCTTTACAAAGGCTaGAAAACGCTTATCCTTGGC +
Preference number: 5 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTLLYKG*KTLILG
Trigger: GCCAAGGATAAGCGTTTTCAAGCCTTTGTAAAGAAG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCTCTCCTTCTTTTCCTTaGGCTTTGTTAACCCAAACA +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVISPSFP*ALLTQT
Trigger: TGTTTGGGTTAACAAAGCCAAAGGAAAAGAAGGAGA...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACAAAAATCAGCAGGTTTaGGCCTTTGGTCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNKNQQV*AFGLFL
Trigger: CAGAAACAGACCAAAGGCCAAAACCTGCTGATTTTT...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACACTTTGATTTTAAACTaGTCCAACCAGAACCTGACC +
Preference number: 5 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYTLILN*SNQNLT
Trigger: GGTCAGGTTCTGGTTGGACAAGTTTAAAATCAAAGT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGGTTGAAAGTGGCAGTTaGCATGTTTTTAACCCTCTC +
Preference number: 5 (lower is better)
Translates to: ISPSARPACNSSISTKLQVESGS*HVFNPL
Trigger: GAGAGGGTTAAAAACATGCAAACTGCCACTTTCAAC...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCATGTGGGGAGAGTGACTaGTGGTCTGCTTACCCAAAA +
Preference number: 5 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPCGESD*WSAYPK
Trigger: TTTTGGGTAAGCAGACCACAAGTCACTCTCCCCACA...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS TCA 90 bp TCACGTACAAGCTTCTTCCGTTTCAAATCTTCCTTGGCAAACATCTaGCCACTCTTCATCCTCATGATTGACTTGCTATCTGTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: SRTSFFRFKSSLANI*PLFILMIDLLSVFV
Trigger: TACAAAGACAGATAGCAAGTCAATCATGAGGATGAAGAGTGGTCAGATGTTTGCCAAGGAAGATTTGAAACGGAAGAAGCTTGTACGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS GCA 90 bp TTTTGCAACCAAATCGCCACTAGAAGTCACTGTGTTCTGTTGACATaGAGAGTCTGCACAAAGTTTATCGTCTCCAGTTGTAGAACAAAT +
Preference number: 5 (lower is better)
Translates to: FCNQIATRSHCVLLT*RVCTKFIVSSCRTN
Trigger: ATTTGTTCTACAACTGGAGACGATAAACTTTGTGCAGACTCTGCATGTCAACAGAACACAGTGACTTCTAGTGGCGATTTGGTTGCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 90 bp TGTCTTTGTATAAATCTCATTGAGACGCACTTTCTTTTCATAACTTaGCACTTTGCTGTCTACAGCTCCAATCACATCCTTCACCAGGCT +
Preference number: 5 (lower is better)
Translates to: CLCINLIETHFLFIT*HFAVYSSNHILHQA
Trigger: AGCCTGGTGAAGGATGTGATTGGAGCTGTAGACAGCAAAGTGGCAAGTTATGAAAAGAAAGTGCGTCTCAATGAGATTTATACAAAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS-3UTR CAA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTACATCATCTTCAGCTTaGTCCTCTTCAGCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCTSSSA*SSSASS
Trigger: GCTGCTTGCTGAAGAGGACAAAGCTGAAGATGATGT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTCTGAAGGCAGCTGTCTaGATCAGATACAGTTCCAGA +
Preference number: 5 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCLKAAV*IRYSSR
Trigger: TCTGGAACTGTATCTGATCAAGACAGCTGCCTTCAG...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGTTGTTATCCACCACTTaGAAAGGACAAAAATCCGCA +
Preference number: 5 (lower is better)
Translates to: KTITCTYEAITFSVILSRLLSTT*KGQKSA
Trigger: TGCGGATTTTTGTCCTTTCAAAGTGGTGGATAACAA...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGTCTTTTCGTTGGCCTTaGTTATCCACCACTTTGAAA +
Preference number: 5 (lower is better)
Translates to: KTITCTYEAITFSVILSRSFRWP*LSTTLK
Trigger: TTTCAAAGTGGTGGATAACAAAGGCCAACGAAAAGA...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGTCTTTTTCCTTTTCTTaGCTCTTCTTGCTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: KTITCTYEAITFSVILSRSFSFS*LFLLLD
Trigger: GTCTAGCAGCAAGAAGAGCAAAGAAAAGGAAAAAGA...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACTATTTAGTGAGTCTGTaGAATGAGACAGGAATTTCC +
Preference number: 5 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYYLVSL*NETGIS
Trigger: GGAAATTCCTGTCTCATTCAACAGACTCACTAAATA...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGTGTTGCCCACAAAACTaGCCATATGTCTTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: FQPLGIPDVSKTITCTYECCPQN*PYVFFK
Trigger: TTTAAAGAAGACATATGGCAAGTTTTGTGGGCAACA...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCTGTTGCCCACAAAACTaGCCATATGTCTTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: DVSKTITCTYEAITFSVICCPQN*PYVFFK
Trigger: TTTAAAGAAGACATATGGCAAGTTTTGTGGGCAACA...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTCCACTTCATTGTCTTaGGTACACTGCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRSTSLS*VHCNIL
Trigger: AAGAATATTGCAGTGTACCAAAGACAATGAAGTGGA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATGTTTGTCTGGCTGGTaGAACTCAGTATGTGAAAAG +
Preference number: 5 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLCLSGW*NSVCEK
Trigger: CTTTTCACATACTGAGTTCAACCAGCCAGACAAACA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAATCGTTCAATTGGACTaGAACTCAGAAGGGAAACTG +
Preference number: 5 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSIVQLD*NSEGKL
Trigger: CAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGAT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CAA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGACATAGTATGGAACCTTaGGAAACTGACTTCATTTTC +
Preference number: 5 (lower is better)
Translates to: ISGLPNRSIGLELRRETGHSMEP*ETDFIF
Trigger: GAAAATGAAGTCAGTTTCCAAAGGTTCCATACTATG...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS TCA 90 bp AACCTATGGCTTGCATTCTTAAATGAGTACCTGAAGACTCTAGAATaGCAACTGGCTGGAAGTACTACAGTGACTGAAGACAAATTGCTT +
Preference number: 5 (lower is better)
Translates to: NLWLAFLNEYLKTLE*QLAGSTTVTEDKLL
Trigger: AAGCAATTTGTCTTCAGTCACTGTAGTACTTCCAGCCAGTTGTCATTCTAGAGTCTTCAGGTACTCATTTAAGAATGCAAGCCATAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558644.2
CDS TCA 90 bp CCTTTACAAAGGCTTGAAAACGCTTATCCTTGGCATAAAGGTCTTTaGAGTAGTTTACAGACTGGTTATGTTGCCCACAAAACTTGCCAT +
Preference number: 5 (lower is better)
Translates to: PLQRLENAYPWHKGL*SSLQTGYVAHKTCH
Trigger: ATGGCAAGTTTTGTGGGCAACATAACCAGTCTGTAAACTACTTCAAAGACCTTTATGCCAAGGATAAGCGTTTTCAAGCCTTTGTAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558009.1
CDS-3UTR CAA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATTAATGAGATGGATTTaGTCAATGGAGAGGAAATGG +
Preference number: 5 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTLMRWI*SMERKW
Trigger: CCATTTCCTCTCCATTGACAAAATCCATCTCATTAA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCTCCACTTCATTGTCTTaGGTACACTGCAATATTCTT +
Preference number: 5 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPSTSLS*VHCNIL
Trigger: AAGAATATTGCAGTGTACCAAAGACAATGAAGTGGA...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTCGTGATTTCTTTAGCTaGATGGAGAACATGGTGTCC +
Preference number: 5 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCRDFFS*MENMVS
Trigger: GGACACCATGTTCTCCATCAAGCTAAAGAAATCACG...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAGAGTGGTTATACATTTaGCATTCCTACAAGCAACAT +
Preference number: 5 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQEWLYI*HSYKQH
Trigger: ATGTTGCTTGTAGGAATGCAAAATGTATAACCACTC...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS TCA 90 bp TCTTTACAAAGGCTTGAAAACGCTTATCCTTGGCATAAAGGTCTTTaGAGTAGTTTACAGACTGGTTATGTTGCCCACAAAACTTGCCAT +
Preference number: 5 (lower is better)
Translates to: SLQRLENAYPWHKGL*SSLQTGYVAHKTCH
Trigger: ATGGCAAGTTTTGTGGGCAACATAACCAGTCTGTAAACTACTTCAAAGACCTTTATGCCAAGGATAAGCGTTTTCAAGCCTTTGTAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS-3UTR CAA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAACTGGATGTTACTTATaGAACTCCAGGTACACATTA +
Preference number: 5 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSTGCYL*NSRYTL
Trigger: TAATGTGTACCTGGAGTTCAATAAGTAACATCCAGT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CAA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAGTGTTCAAATTTGGTTaGGCCTTTGTTAGCACTGCT +
Preference number: 5 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPVFKFG*AFVSTA
Trigger: AGCAGTGCTAACAAAGGCCAAACCAAATTTGAACAC...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CAA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAGCACATGTCAACAGTTaGCTTCTTTTTATTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SNLVWPLLALLEQFCATEAHVNS*LLFIAE
Trigger: CTCAGCAATAAAAAGAAGCAAACTGTTGACATGTGC...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CAA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTACATCCCCTATCCTCTaGATGAGAAAGTTCTTTTCA +
Preference number: 5 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCTSPIL*MRKFFS
Trigger: TGAAAAGAACTTTCTCATCAAGAGGATAGGGGATGT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTTACGAAGCCAGTATGTaGTGGCAAAATTCGAGAAAA +
Preference number: 5 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCYEASM*WQNSRK
Trigger: TTTTCTCGAATTTTGCCACAACATACTGGCTTCGTA...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CAA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCAACACATCCAAGTTGTaGCACATGTCAACAGTTTGC +
Preference number: 5 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPNTSKL*HMSTVC
Trigger: GCAAACTGTTGACATGTGCAACAACTTGGATGTGTT...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS CCA 90 bp ACAGGAATTTCCAGGTGTTTGACATGTTCTCATCATTGCCAACTCTaGGGACAAAAGAAAAATACATACTGTCAAATACATTCTGATAAC +
Preference number: 5 (lower is better)
Translates to: TGISRCLTCSHHCQL*GQKKNTYCQIHSDN
Trigger: GTTATCAGAATGTATTTGACAGTATGTATTTTTCTTTTGTCCCCAGAGTTGGCAATGATGAGAACATGTCAAACACCTGGAAATTCCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558644.2
CDS-3UTR CAA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCCTCAAGTGTTCAAATTaGGTTTGGCCTTTGTTAGCA +
Preference number: 5 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPLKCSN*VWPLLA
Trigger: TGCTAACAAAGGCCAAACCAAATTTGAACACTTGAG...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CAA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAATATGTTCTTCATCTTaGCCAGCACTTGGTATTCTT +
Preference number: 5 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPICSSS*PALGIL
Trigger: AAGAATACCAAGTGCTGGCAAAGATGAAGAACATAT...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS GCA 72 bp CGCTTCACCGCGGCTGCTCGGGCTCCGCGCTGGCCCTaGACACAGCTCCAGTCCGCGCATGCGCCGAAAGAC +
Preference number: 6 (lower is better)
Translates to: RFTAAARAPRWP*TQLQSAHAPKD
Trigger: GTCTTTCGGCGCATGCGCGGACTGGAGCTGTGTGCAGGGCCAGCGCGGAGCCCGAGCAGCCGCGGTGAAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560571.1
CDS GCA 72 bp TCCTCCCGCTCCTTTTCCAGGTCCTGCTGCCCCTGCTaGACCTCCTCCTCGCGCTGGGCCAGGAGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: SSRSFSRSCCPC*TSSSRWARRAS
Trigger: GGAGGCCCTCCTGGCCCAGCGCGAGGAGGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGAGCGGGAGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 72 bp AGCTCCTCCCGCTCCTTTTCCAGGTCCTGCTGCCCCTaGTGCACCTCCTCCTCGCGCTGGGCCAGGAGGGCC +
Preference number: 6 (lower is better)
Translates to: SSSRSFSRSCCP*CTSSSRWARRA
Trigger: GGCCCTCCTGGCCCAGCGCGAGGAGGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGAGCGGGAGGAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CCA 72 bp CACTCACGCTCGCGCCTGCGCTTCTCCTCGAGGTACTaGGCCTGCTGCTTCTGCAGGTTGGCCAGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: HSRSRLRFSSRY*ACCFCRLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAGGCCCAGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGTG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 72 bp GCTCCCTCTCACGAGCTTCCCACTCACGCTCGCGCCTaGGCTTCTCCTCGAGGTACTGGGCCTGCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: APSHELPTHARA*ASPRGTGPAAS
Trigger: AGAAGCAGCAGGCCCAGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGTGGGAAGCTCGTGAGAGGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 72 bp GCTCTCCGGGGCAGGGAAACGGGACCGACCACATCTTaGTCAATGGGGCTGCTGACAGTCGGCCCAAGTGTG +
Preference number: 6 (lower is better)
Translates to: ALRGRETGPTTS*SMGLLTVGPSV
Trigger: CACACTTGGGCCGACTGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCCCGTTTCCCTGCCCCGGAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CCA 72 bp AAGGCCAAGCTCACAGGCGTCGCCCCTTCCTGGTTGTaGATACTGAGAGCTCCGCGGCCACCTGGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: KAKLTGVAPSWL*ILRAPRPPGFC
Trigger: GCAGAAGCCAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGCGACGCCTGTGAGCTTGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp TGTGCTCTGCCCCCAAGGCTTCCTGCCTTGACTCTGTaGCCAGACTTGCTCCTGGTGGCACCAGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: CALPPRLPALTL*PDLLLVAPGSG
Trigger: CCCAGAGCCTGGTGCCACCAGGAGCAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGCAGAGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp TCCAAGGCCAAGCTCACAGGCGTCGCCCCTTCCTGGTaGTGGATACTGAGAGCTCCGCGGCCACCTGGCTTC +
Preference number: 6 (lower is better)
Translates to: SKAKLTGVAPSW*WILRAPRPPGF
Trigger: GAAGCCAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGCGACGCCTGTGAGCTTGGCCTTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp GCAACAGAGCGGAGCTGTTGTGCTCTGCCCCCAAGGCTTCCTGCCTaGACTCTGTGGCCAGACTTGCTCCTGGTGGCACCAGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ATERSCCALPPRLPA*TLWPDLLLVAPGSG
Trigger: CCCAGAGCCTGGTGCCACCAGGAGCAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCTGTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp GCATCGCTGGCTGCATTTTTCCCAGGCCCCCAGCTGTaGCTCCGGAAGGGAGAAAGAGAGCGCATGGAGCTC +
Preference number: 6 (lower is better)
Translates to: ASLAAFFPGPQL*LRKGERERMEL
Trigger: GAGCTCCATGCGCTCTCTTTCTCCCTTCCGGAGGCACAGCTGGGGGCCTGGGAAAAATGCAGCCAGCGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS CCA 72 bp CCATCCCGTGCTGAAGCTCTGCAGCAGTGGAGGATGTaGACAGGCCTACTGCCCTGTCTTCTAGTGGCCGCG +
Preference number: 6 (lower is better)
Translates to: PSRAEALQQWRM*TGLLPCLLVAA
Trigger: CGCGGCCACTAGAAGACAGGGCAGTAGGCCTGTCCACATCCTCCACTGCTGCAGAGCTTCAGCACGGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp GAGGGGCGGGACCCTCATGCTCTCCACCAAGTCCTGTaGGACTGGTATTCCCCATCCCGTGCTGAAGCTCTG +
Preference number: 6 (lower is better)
Translates to: EGRDPHALHQVL*DWYSPSRAEAL
Trigger: CAGAGCTTCAGCACGGGATGGGGAATACCAGTCTCACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp TTTATCGACATGATTCGACCCCCATGCCAGGAAGCGTaGTCTCACAGAAGCGGGGGCGCATGCCGTCAGGGC +
Preference number: 6 (lower is better)
Translates to: FIDMIRPPCQEA*SHRSGGACRQG
Trigger: GCCCTGACGGCATGCGCCCCCGCTTCTGTGAGAGCACGCTTCCTGGCATGGGGGTCGAATCATGTCGATAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557852.2
CDS GCA 72 bp TTGTGGATACTGAGAGCTCCGCGGCCACCTGGCTTCTaGAACAGGAACCACGTCAACCTCAGCAGTCCCAGC +
Preference number: 6 (lower is better)
Translates to: LWILRAPRPPGF*NRNHVNLSSPS
Trigger: GCTGGGACTGCTGAGGTTGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCTCTCAGTATCCACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp AGAAGAAGAAAGTCGCTGAGGGTCCGTGGGCTCCGGTaGACAGGGAAGAAACTGGCCATCTGTCTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: RRRKSLRVRGLR*TGKKLAICLWG
Trigger: GCCCCAGAGACAGATGGCCAGTTTCTTCCCTGTGCACCGGAGCCCACGGACCCTCAGCGACTTTCTTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000558166.2
ENST00000558811.2
ENST00000559362.5
CDS GCA 72 bp AGAGCTTCTGGGATTGCTGGAGGGGCGGGACCCTCATaGTCTCCACCAAGTCCTGTGAGACTGGTATTCCCC +
Preference number: 6 (lower is better)
Translates to: RASGIAGGAGPS*SPPSPVRLVFP
Trigger: GGGGAATACCAGTCTCACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp ATCCACTATACGGCTGGCAGCCTCCTCTATCAAGTCTaGCCCCTTAGGCAGAGGTGCGTCCTGGGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: IHYTAGSLLYQV*PLRQRCVLGRD
Trigger: GTCTCTGCCCAGGACGCACCTCTGCCTAAGGGGGCAGACTTGATAGAGGAGGCTGCCAGCCGTATAGTGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp ATCCTGCAAGGCTCCCCGTGGCTTCCTCAGGAGTACTaGCCATTGGTAGGCTCTCCCCAGGTGGGAAAGTAC +
Preference number: 6 (lower is better)
Translates to: ILQGSPWLPQEY*PLVGSPQVGKY
Trigger: GTACTTTCCCACCTGGGGAGAGCCTACCAATGGGCAGTACTCCTGAGGAAGCCACGGGGAGCCTTGCAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp GGGCAGCACGCAGTCGCTCCAGGTCATACTGGTATGTaGCCTTCTTCTGCTGGAGCTCCTCCCGCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: GQHAVAPGHTGM*PSSAGAPPAPF
Trigger: AAAAGGAGCGGGAGGAGCTCCAGCAGAAGAAGGGCACATACCAGTATGACCTGGAGCGACTGCGTGCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CCA 72 bp CGCTCCAGGTCATACTGGTATGTGCCCTTCTTCTGCTaGAGCTCCTCCCGCTCCTTTTCCAGGTCCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RSRSYWYVPFFC*SSSRSFSRSCC
Trigger: GCAGCAGGACCTGGAAAAGGAGCGGGAGGAGCTCCAGCAGAAGAAGGGCACATACCAGTATGACCTGGAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CCA 72 bp TGTTTCTGGGCAGCACGCAGTCGCTCCAGGTCATACTaGTATGTGCCCTTCTTCTGCTGGAGCTCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: CFWAARSRSRSY*YVPFFCWSSSR
Trigger: GCGGGAGGAGCTCCAGCAGAAGAAGGGCACATACCAGTATGACCTGGAGCGACTGCGTGCTGCCCAGAAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CAA 90 bp CCATCAGACCCATCTGGCAACAGACATGGCAACAGAGCGGAGCTGTaGTGCTCTGCCCCCAAGGCTTCCTGCCTTGACTCTGTGGCCAGA +
Preference number: 6 (lower is better)
Translates to: PSDPSGNRHGNRAEL*CSAPKASCLDSVAR
Trigger: TCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGATGGGTCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp GTGACAGGCCTCCCCCTCAGTAAGCAGTGCTCCAGCGGCCTTGACTaGTTCGATGACAGCATCCACTATACGGCTGGCAGCCTCCTCTAT +
Preference number: 6 (lower is better)
Translates to: VTGLPLSKQCSSGLD*FDDSIHYTAGSLLY
Trigger: ATAGAGGAGGCTGCCAGCCGTATAGTGGATGCTGTCATCGAACAAGTCAAGGCCGCTGGAGCACTGCTTACTGAGGGGGAGGCCTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp TACTGGGCTGTGCCTGGCTCCATGACCAAGTCTCTCTaGAGCACAGCATCTCCACTGCTCAGGGACTCCTGG +
Preference number: 6 (lower is better)
Translates to: YWAVPGSMTKSL*STASPLLRDSW
Trigger: CCAGGAGTCCCTGAGCAGTGGAGATGCTGTGCTTCAGAGAGACTTGGTCATGGAGCCAGGCACAGCCCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp TGGGTCTTCACAGTGGGAGGCATCGGGTGGATCTTGTaGGCTGGGTTGCCTTGCTGTGGTGCTTTCGGACTC +
Preference number: 6 (lower is better)
Translates to: WVFTVGGIGWIL*AGLPCCGAFGL
Trigger: GAGTCCGAAAGCACCACAGCAAGGCAACCCAGCTCACAAGATCCACCCGATGCCTCCCACTGTGAAGACCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp CCGCACGTTCCTGGGTATCCCTTACAGGGTCAGAGGTaGCTGTATGAGCCTGTGGGTCTTCACAGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: PHVPGYPLQGQR*LYEPVGLHSGR
Trigger: CCTCCCACTGTGAAGACCCACAGGCTCATACAGTCACCTCTGACCCTGTAAGGGATACCCAGGAACGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp AAACGGGACCGACCACATCTTGCTCAATGGGGCTGCTaGCAGTCGGCCCAAGTGTGCCTCCCAGATTTCCAC +
Preference number: 6 (lower is better)
Translates to: KRDRPHLAQWGC*QSAQVCLPDFH
Trigger: GTGGAAATCTGGGAGGCACACTTGGGCCGACTGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCCCGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS TCA 72 bp GGGGGCGCATGCCGTCAGGGCAGAGCTCAGCAGCTTTaGGCTGCCATTAGTGAAATCGTAAGAGGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: GGACRQGRAQQL*AAISEIVRGSQ
Trigger: CTGGCTTCCTCTTACGATTTCACTAATGGCAGCTCAAAGCTGCTGAGCTCTGCCCTGACGGCATGCGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557852.2
CDS GCA 72 bp AGTCGCTCCAGGTCATACTGGTATGTGCCCTTCTTCTaGTGGAGCTCCTCCCGCTCCTTTTCCAGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SRSRSYWYVPFF*WSSSRSFSRSC
Trigger: GCAGGACCTGGAAAAGGAGCGGGAGGAGCTCCAGCAGAAGAAGGGCACATACCAGTATGACCTGGAGCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CCA 72 bp TTCCTGGTTGTGGATACTGAGAGCTCCGCGGCCACCTaGCTTCTGCAACAGGAACCACGTCAACCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: FLVVDTESSAAT*LLQQEPRQPQQ
Trigger: CTGCTGAGGTTGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGGAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp AGCATCGGACCCATCAGACCCATCTGGCAACAGACATaGCAACAGAGCGGAGCTGTTGTGCTCTGCCCCCAA +
Preference number: 6 (lower is better)
Translates to: SIGPIRPIWQQT*QQSGAVVLCPQ
Trigger: TTGGGGGCAGAGCACAACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGATGGGTCTGATGGGTCCGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp TCTATCAAGTCTGCCCCCTTAGGCAGAGGTGCGTCCTaGGCAGAGACCATGCAAGGTAGAGAGGGAGTGCTC +
Preference number: 6 (lower is better)
Translates to: SIKSAPLGRGAS*AETMQGREGVL
Trigger: GAGCACTCCCTCTCTACCTTGCATGGTCTCTGCCCAGGACGCACCTCTGCCTAAGGGGGCAGACTTGATAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp CCCAGCTGTGCCTCCGGAAGGGAGAAAGAGAGCGCATaGAGCTCCTTAGGACAGAGCAGTTTGCAGGCACTT +
Preference number: 6 (lower is better)
Translates to: PSCASGREKESA*SSLGQSSLQAL
Trigger: AAGTGCCTGCAAACTGCTCTGTCCTAAGGAGCTCCATGCGCTCTCTTTCTCCCTTCCGGAGGCACAGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS CCA 72 bp GAGAACTCTAGGGCTATGTGTTGGGGAGCAATCCTCTaGGAGAGGGGTGCTGCACTCAGCCATGTCCCGGAA +
Preference number: 6 (lower is better)
Translates to: ENSRAMCWGAIL*ERGAALSHVPE
Trigger: TTCCGGGACATGGCTGAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGAGTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CAA 72 bp CCATCTGGCAACAGACATGGCAACAGAGCGGAGCTGTaGTGCTCTGCCCCCAAGGCTTCCTGCCTTGACTCT +
Preference number: 6 (lower is better)
Translates to: PSGNRHGNRAEL*CSAPKASCLDS
Trigger: AGAGTCAAGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp CTCCCCCTCAGTAAGCAGTGCTCCAGCGGCCTTGACTaGTTCGATGACAGCATCCACTATACGGCTGGCAGC +
Preference number: 6 (lower is better)
Translates to: LPLSKQCSSGLD*FDDSIHYTAGS
Trigger: GCTGCCAGCCGTATAGTGGATGCTGTCATCGAACAAGTCAAGGCCGCTGGAGCACTGCTTACTGAGGGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp CAGGCCTCCCCCTCAGTAAGCAGTGCTCCAGCGGCCTaGACTTGTTCGATGACAGCATCCACTATACGGCTG +
Preference number: 6 (lower is better)
Translates to: QASPSVSSAPAA*TCSMTASTIRL
Trigger: CAGCCGTATAGTGGATGCTGTCATCGAACAAGTCAAGGCCGCTGGAGCACTGCTTACTGAGGGGGAGGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp TCCTGGGTATCCCTTACAGGGTCAGAGGTGACTGTATaGGCCTGTGGGTCTTCACAGTGGGAGGCATCGGGT +
Preference number: 6 (lower is better)
Translates to: SWVSLTGSEVTV*ACGSSQWEASG
Trigger: ACCCGATGCCTCCCACTGTGAAGACCCACAGGCTCATACAGTCACCTCTGACCCTGTAAGGGATACCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp CACCAGGCTCTGGGCAGCCCCACCTTGAGTCAGCAGTaGGACTTGTGGGGCCACTTCCTTGTTATGTTCAGT +
Preference number: 6 (lower is better)
Translates to: HQALGSPTLSQQ*DLWGHFLVMFS
Trigger: ACTGAACATAACAAGGAAGTGGCCCCACAAGTCTCACTGCTGACTCAAGGTGGGGCTGCCCAGAGCCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp TCCTTTAGTGAGAGGACCCAACTCAGGGCTGGACAGTaGCATGTGACAGGCCTCCCCCTCAGTAAGCAGTGC +
Preference number: 6 (lower is better)
Translates to: SFSERTQLRAGQ*HVTGLPLSKQC
Trigger: GCACTGCTTACTGAGGGGGAGGCCTGTCACATGTCACTGTCCAGCCCTGAGTTGGGTCCTCTCACTAAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp CAGTGGGAGGCATCGGGTGGATCTTGTGAGCTGGGTTaGCTTGCTGTGGTGCTTTCGGACTCGCTAACTATG +
Preference number: 6 (lower is better)
Translates to: QWEASGGSCELG*LAVVLSDSLTM
Trigger: CATAGTTAGCGAGTCCGAAAGCACCACAGCAAGGCAACCCAGCTCACAAGATCCACCCGATGCCTCCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp GTCAGTGTTCCCCTTGATATTCAGAGCTTCTGGGATTaGTGGAGGGGCGGGACCCTCATGCTCTCCACCAAG +
Preference number: 6 (lower is better)
Translates to: VSVPLDIQSFWD*WRGGTLMLSTK
Trigger: CTTGGTGGAGAGCATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGAATATCAAGGGGAACACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp CAGTCTCTTCAGAAGAAGAAAGTCGCTGAGGGTCCGTaGGCTCCGGTGCACAGGGAAGAAACTGGCCATCTG +
Preference number: 6 (lower is better)
Translates to: QSLQKKKVAEGP*APVHREETGHL
Trigger: CAGATGGCCAGTTTCTTCCCTGTGCACCGGAGCCCACGGACCCTCAGCGACTTTCTTCTTCTGAAGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000558166.2
ENST00000558811.2
ENST00000559362.5
CDS CCA 72 bp AGTGTTCCCCTTGATATTCAGAGCTTCTGGGATTGCTaGAGGGGCGGGACCCTCATGCTCTCCACCAAGTCC +
Preference number: 6 (lower is better)
Translates to: SVPLDIQSFWDC*RGGTLMLSTKS
Trigger: GGACTTGGTGGAGAGCATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGAATATCAAGGGGAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp TGTGTTGGAGCGGAAGAGAACTCTAGGGCTATGTGTTaGGGAGCAATCCTCTGGGAGAGGGGTGCTGCACTC +
Preference number: 6 (lower is better)
Translates to: CVGAEENSRAMC*GAILWERGAAL
Trigger: GAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGAGTTCTCTTCCGCTCCAACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS TCA 72 bp CAGATAAGGAGTTTCAGACCATCCTGGCCAACATGGTaGAACTATACATGTCCCGTGCGGCTCCCGGGGCTC +
Preference number: 6 (lower is better)
Translates to: QIRSFRPSWPTW*NYTCPVRLPGL
Trigger: GAGCCCCGGGAGCCGCACGGGACATGTATAGTTTCACCATGTTGGCCAGGATGGTCTGAAACTCCTTATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560256.1
CDS GCA 72 bp CACGTCAACCTCAGCAGTCCCAGCCGCACAGCAAAATaGATCAATGTCTCTCGCGGGCCAGCATCATGCAAA +
Preference number: 6 (lower is better)
Translates to: HVNLSSPSRTAK*INVSRGPASCK
Trigger: TTTGCATGATGCTGGCCCGCGAGAGACATTGATGCATTTTGCTGTGCGGCTGGGACTGCTGAGGTTGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp ATTCATCTGATGGCTGTCAAATCCTCCAAAGGTCTCTaGTCTCCGGGGCAGGGAAACGGGACCGACCACATC +
Preference number: 6 (lower is better)
Translates to: IHLMAVKSSKGL*SPGQGNGTDHI
Trigger: GATGTGGTCGGTCCCGTTTCCCTGCCCCGGAGAGCAGAGACCTTTGGAGGATTTGACAGCCATCAGATGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 72 bp GGAAGGGAGCAAGCAGTTCAGCTTCCTTTCCCACTCTaGTTTTTGCACTGCCCTAAGCACCCTGTGTCCCAG +
Preference number: 6 (lower is better)
Translates to: GREQAVQLPFPL*FLHCPKHPVSQ
Trigger: CTGGGACACAGGGTGCTTAGGGCAGTGCAAAAAGCAGAGTGGGAAAGGAAGCTGAACTGCTTGCTCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559278.1
CDS CCA 72 bp TCCCAGTTCACCTCCAGAGGAATACTGGGCTGTGCCTaGCTCCATGACCAAGTCTCTCTGAAGCACAGCATC +
Preference number: 6 (lower is better)
Translates to: SQFTSRGILGCA*LHDQVSLKHSI
Trigger: GATGCTGTGCTTCAGAGAGACTTGGTCATGGAGCCAGGCACAGCCCAGTATTCCTCTGGAGGTGAACTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp ATTTGGGCTTCCTCAGCGTCACCCATGGTACAGCTGTaGTCTGCTCCCTCCAGCTTCCCTTTCTCCCAATCA +
Preference number: 6 (lower is better)
Translates to: IWASSASPMVQL*SAPSSFPFSQS
Trigger: TGATTGGGAGAAAGGGAAGCTGGAGGGAGCAGACCACAGCTGTACCATGGGTGACGCTGAGGAAGCCCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp GGCTGCAGTAGGACAGGATGTGCTTCATCGTCTATTTaGGCTTCCTCAGCGTCACCCATGGTACAGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GCSRTGCASSSI*ASSASPMVQLW
Trigger: CCACAGCTGTACCATGGGTGACGCTGAGGAAGCCCAAATAGACGATGAAGCACATCCTGTCCTACTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp TCTTCAGCAATACCACGTCCACAGTCCTGTCCACCTTaGAGATGTCACAGAGGCTGTAGCGCCTCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: SSAIPRPQSCPP*RCHRGCSASCA
Trigger: GGCACAAGAGGCGCTACAGCCTCTGTGACATCTCCAAGGTGGACAGGACTGTGGACGTGGTATTGCTGAAGA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000560676.5
CDS CAA 72 bp TCTGGGGTTCCAACTCCCTGTGGGTCAGTCACAGCTTaGTCCTGTAGAGCCACTGGCAAACCTAGAACGGCA +
Preference number: 6 (lower is better)
Translates to: SGVPTPCGSVTA*SCRATGKPRTA
Trigger: TGCCGTTCTAGGTTTGCCAGTGGCTCTACAGGACAAAGCTGTGACTGACCCACAGGGAGTTGGAACCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp AAAGTGGCCTTACCCACACTTTGCAGGGAAGAGTCAGTGTTCCCCTaGATATTCAGAGCTTCTGGGATTGCTGGAGGGGCGGGACCCTCA +
Preference number: 6 (lower is better)
Translates to: KVALPTLCREESVFP*IFRASGIAGGAGPS
Trigger: TGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCTCTGAATATCAAGGGGAACACTGACTCTTCCCTGCAAAGTGTGGGTAAGGCCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp AGCTCCATGTCTGTGGGGAGCTCCTTGGCAACAGGCTaGAGTAGGACAGGATGTGCTTCATCGTCTATTTGG +
Preference number: 6 (lower is better)
Translates to: SSMSVGSSLATG*SRTGCASSSIW
Trigger: CCAAATAGACGATGAAGCACATCCTGTCCTACTGCAGCCTGTTGCCAAGGAGCTCCCCACAGACATGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp ACTGCAGTTAAGAGCATCGGACCCATCAGACCCATCTaGCAACAGACATGGCAACAGAGCGGAGCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: TAVKSIGPIRPI*QQTWQQSGAVV
Trigger: CACAACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGATGGGTCTGATGGGTCCGATGCTCTTAACTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp GTCCCCAATACATTCCACTCCGTGGGCAGCTTCAGGTaGCTGAATGCCAGCACCAACTTCTTATCAAGGGAA +
Preference number: 6 (lower is better)
Translates to: VPNTFHSVGSFR*LNASTNFLSRE
Trigger: TTCCCTTGATAAGAAGTTGGTGCTGGCATTCAGGCACCTGAAGCTGCCCACGGAGTGGAATGTATTGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560302.5
CDS CCA 72 bp CTTCTTCAGCCACCACAAACACGGGAAGGCCCTCTTTaGAAGCACAGAGCTGCACCTTCACTGTTTCACAAC +
Preference number: 6 (lower is better)
Translates to: LLQPPQTREGPL*KHRAAPSLFHN
Trigger: GTTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCGTGTTTGTGGTGGCTGAAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560302.5
CDS CCA 72 bp CCCTCCCTGAAGCACATTCTTCCAAACAGTGGCATCTaGGTTCATGAGCCCATGTTCCATTTCCCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: PSLKHILPNSGI*VHEPMFHFPCS
Trigger: ACTGCAGGGGAAATGGAACATGGGCTCATGAACCCAGATGCCACTGTTTGGAAGAATGTGCTTCAGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp ATCTGCTGCTCAAAAAGCAGATCCGCCATCATCCCCTaGCTGTACACACCACTCATGATCTTGAGAGTGCGG +
Preference number: 6 (lower is better)
Translates to: ICCSKSRSAIIP*LYTPLMILRVR
Trigger: CCGCACTCTCAAGATCATGAGTGGTGTGTACAGCCAGGGGATGATGGCGGATCTGCTTTTTGAGCAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000559820.1
ENST00000560579.5
ENST00000560676.5
CDS CAA 72 bp TTACCCACACTTTGCAGGGAAGAGTCAGTGTTCCCCTaGATATTCAGAGCTTCTGGGATTGCTGGAGGGGCG +
Preference number: 6 (lower is better)
Translates to: LPTLCREESVFP*IFRASGIAGGA
Trigger: CGCCCCTCCAGCAATCCCAGAAGCTCTGAATATCAAGGGGAACACTGACTCTTCCCTGCAAAGTGTGGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp CGTGCCCTTTACTCCACAATCAGGCAAGCTCTGAAGGCAGCTGTCTaGATCAGATACAGTTCCAGAGTCCACAATAGGTGCTGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: RALYSTIRQALKAAV*IRYSSRVHNRCWLH
Trigger: GTGGAGCCAGCACCTATTGTGGACTCTGGAACTGTATCTGATCAAGACAGCTGCCTTCAGAGCTTGCCTGATTGTGGAGTAAAGGGCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp GGTATCATCTCTGGGGTTCCAACTCCCTGTGGGTCAGTCACAGCTTaGTCCTGTAGAGCCACTGGCAAACCTAGAACGGCATTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: GIISGVPTPCGSVTA*SCRATGKPRTAFFS
Trigger: AGAGAAGAATGCCGTTCTAGGTTTGCCAGTGGCTCTACAGGACAAAGCTGTGACTGACCCACAGGGAGTTGGAACCCCAGAGATGATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp TCTGCTTGGAAGCCAGAAGAGATGCTGCATCAGGGCATGGCTCTATaGTACACCAGTTTTCTCGGTTTATCGCCTGGGTCATTGGGCCTT +
Preference number: 6 (lower is better)
Translates to: SAWKPEEMLHQGMAL*YTSFLGLSPGSLGL
Trigger: AAGGCCCAATGACCCAGGCGATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
CDS CAA 90 bp ATGGAGACACTTTTGGAGAGCGAGACACTCTGCTGGGATCGTCTATaGGCAAATATTGGGGTGGTAGCGGTTTCATCCACCAGGAGGACT +
Preference number: 6 (lower is better)
Translates to: METLLESETLCWDRL*ANIGVVAVSSTRRT
Trigger: AGTCCTCCTGGTGGATGAAACCGCTACCACCCCAATATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559278.1
ENST00000560482.5
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp CATGACCAGGAGCAATGGTCTCCAATGTATCAGAACTaGCCTTCCGAGTACTTGTACAGTGACGGAGGGTGG +
Preference number: 6 (lower is better)
Translates to: HDQEQWSPMYQN*PSEYLYSDGGW
Trigger: CCACCCTCCGTCACTGTACAAGTACTCGGAAGGTCAGTTCTGATACATTGGAGACCATTGCTCCTGGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560302.5
CDS TCA 72 bp GCCCATGTTCCATTTCCCCTGCAGTGTCTGGGGTACTaGCATTTGTTGTTGAAATGCCTCCCAGTTCACCTC +
Preference number: 6 (lower is better)
Translates to: AHVPFPLQCLGY*HLLLKCLPVHL
Trigger: GAGGTGAACTGGGAGGCATTTCAACAACAAATGTCAGTACCCCAGACACTGCAGGGGAAATGGAACATGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp CCACTCACCTCACAGGCACTAGTTTTTCCCTGGGATTaGGTGTTCTTCACTCCAACATCCAGAGGAGAAGGC +
Preference number: 6 (lower is better)
Translates to: PLTSQALVFPWD*VFFTPTSRGEG
Trigger: GCCTTCTCCTCTGGATGTTGGAGTGAAGAACACTCAATCCCAGGGAAAAACTAGTGCCTGTGAGGTGAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp CTTCATTTCTGTTTCCACAGGACGAAAGGCCTTCCGTaGCCTTTACTCCACAATCAGGCAAGCTCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: LHFCFHRTKGLP*PLLHNQASSEG
Trigger: GCCTTCAGAGCTTGCCTGATTGTGGAGTAAAGGGCACGGAAGGCCTTTCGTCCTGTGGAAACAGAAATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp CTCACATTCTGGGCTCTGCTTGGAAGCCAGAAGAGATaGTGCATCAGGGCATGGCTCTATTGTACACCAGTT +
Preference number: 6 (lower is better)
Translates to: LTFWALLGSQKR*CIRAWLYCTPV
Trigger: AACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
ENST00000560579.5
ENST00000560676.5
CDS CCA 72 bp CAGCTTCCCTTTCTCCCAATCAAGAGGTATCATCTCTaGGGTTCCAACTCCCTGTGGGTCAGTCACAGCTTT +
Preference number: 6 (lower is better)
Translates to: QLPFLPIKRYHL*GSNSLWVSHSF
Trigger: AAAGCTGTGACTGACCCACAGGGAGTTGGAACCCCAGAGATGATACCTCTTGATTGGGAGAAAGGGAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp TCTTCTTCAGCCACCACAAACACGGGAAGGCCCTCTTaGGAAGCACAGAGCTGCACCTTCACTGTTTCACAA +
Preference number: 6 (lower is better)
Translates to: SSSATTNTGRPS*EAQSCTFTVSQ
Trigger: TTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCGTGTTTGTGGTGGCTGAAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560302.5
CDS CAA 72 bp CCAGTTTTCTCGGTTTATCGCCTGGGTCATTGGGCCTaGCTTCATCTTCAGTGTAGCAGCTATGCTCCCTAC +
Preference number: 6 (lower is better)
Translates to: PVFSVYRLGHWA*LHLQCSSYAPY
Trigger: GTAGGGAGCATAGCTGCTACACTGAAGATGAAGCAAGGCCCAATGACCCAGGCGATAAACCGAGAAAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
CDS CAA 72 bp CTTTTGGAGAGCGAGACACTCTGCTGGGATCGTCTATaGGCAAATATTGGGGTGGTAGCGGTTTCATCCACC +
Preference number: 6 (lower is better)
Translates to: LLESETLCWDRL*ANIGVVAVSST
Trigger: GGTGGATGAAACCGCTACCACCCCAATATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTCCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000557852.2
ENST00000559278.1
ENST00000560482.5
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp TTCCCCTGCAGTGTCTGGGGTACTGACATTTGTTGTTaGAATGCCTCCCAGTTCACCTCCAGAGGAATACTG +
Preference number: 6 (lower is better)
Translates to: FPCSVWGTDICC*NASQFTSRGIL
Trigger: CAGTATTCCTCTGGAGGTGAACTGGGAGGCATTTCAACAACAAATGTCAGTACCCCAGACACTGCAGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp ACCAGCTCATACTTCTCCTATGAATGGGAGGTCTCCTaGCAACATCCCCAAGAACTCGCATTGAACTCCGGT +
Preference number: 6 (lower is better)
Translates to: TSSYFSYEWEVS*QHPQELALNSG
Trigger: ACCGGAGTTCAATGCGAGTTCTTGGGGATGTTGTCAGGAGACCTCCCATTCATAGGAGAAGTATGAGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559486.2
CDS TCA 72 bp GGTGTGAATGCAGGCTGTGACAGGATCCTACTGAGGTaGTCACAAGCAATGCCCACAGTGATACTCACTTTG +
Preference number: 6 (lower is better)
Translates to: GVNAGCDRILLR*SQAMPTVILTL
Trigger: CAAAGTGAGTATCACTGTGGGCATTGCTTGTGATCACCTCAGTAGGATCCTGTCACAGCCTGCATTCACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000558092.1
ENST00000560957.1
CDS GCA 72 bp CAGTTTTCTCGGTTTATCGCCTGGGTCATTGGGCCTTaGTTCATCTTCAGTGTAGCAGCTATGCTCCCTACA +
Preference number: 6 (lower is better)
Translates to: QFSRFIAWVIGP*FIFSVAAMLPT
Trigger: TGTAGGGAGCATAGCTGCTACACTGAAGATGAAGCAAGGCCCAATGACCCAGGCGATAAACCGAGAAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
CDS GCA 72 bp ACATTCTGGGCTCTGCTTGGAAGCCAGAAGAGATGCTaGATCAGGGCATGGCTCTATTGTACACCAGTTTTC +
Preference number: 6 (lower is better)
Translates to: TFWALLGSQKRC*IRAWLYCTPVF
Trigger: GAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
ENST00000560579.5
ENST00000560676.5
CDS GCA 72 bp GTTTATTTCCACGGAGCAATAGCGGTTTCTCTTTGCTaGCTCGGAACATGGTTACCCACAGATGGAACAGGC +
Preference number: 6 (lower is better)
Translates to: VYFHGAIAVSLC*LGTWLPTDGTG
Trigger: GCCTGTTCCATCTGTGGGTAACCATGTTCCGAGGCAGCAAAGAGAAACCGCTATTGCTCCGTGGAAATAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560340.5
CDS CCA 72 bp GCACAGCATCTCCACTGCTCAGGGACTCCTGGTCTGTaGGCATTCCAGAAGATTTTGTTCCAGTTTCTTCAT +
Preference number: 6 (lower is better)
Translates to: AQHLHCSGTPGL*AFQKILFQFLH
Trigger: ATGAAGAAACTGGAACAAAATCTTCTGGAATGCCCACAGACCAGGAGTCCCTGAGCAGTGGAGATGCTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp CTTTCTGGGAGGGGACAAAAGAAAGTGCGTCATCCTTaGTTACTGATTCACTGCCTGGACTGTTTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: LSGRGQKKVRHP*LLIHCLDCLPE
Trigger: CTCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCAAGGATGACGCACTTTCTTTTGTCCCCTCCCAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp CTGCTTGGAAGCCAGAAGAGATGCTGCATCAGGGCATaGCTCTATTGTACACCAGTTTTCTCGGTTTATCGC +
Preference number: 6 (lower is better)
Translates to: LLGSQKRCCIRA*LYCTPVFSVYR
Trigger: GCGATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
CDS CCA 72 bp TCAGTCAGATTAGCACTGGTATTGTGGAAGGTACTGTaGAAGGGCCGTGAATTGTCCAATCCAGGATGGCTG +
Preference number: 6 (lower is better)
Translates to: SVRLALVLWKVL*KGRELSNPGWL
Trigger: CAGCCATCCTGGATTGGACAATTCACGGCCCTTCCACAGTACCTTCCACAATACCAGTGCTAATCTGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560579.5
ENST00000560676.5
CDS CCA 72 bp TGTATGGAGACACTTTTGGAGAGCGAGACACTCTGCTaGGATCGTCTATTGGCAAATATTGGGGTGGTAGCG +
Preference number: 6 (lower is better)
Translates to: CMETLLESETLC*DRLLANIGVVA
Trigger: CGCTACCACCCCAATATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559278.1
ENST00000560482.5
ENST00000560579.5
ENST00000560676.5
CDS CCA 72 bp GACTCCTTCTTCCGCTCCAGAATCCTCTGGAAGAATTaGCTATGGATACTGATCAGCTCATCCAAACAGGGG +
Preference number: 6 (lower is better)
Translates to: DSFFRSRILWKN*LWILISSSKQG
Trigger: CCCCTGTTTGGATGAGCTGATCAGTATCCATAGCCAATTCTTCCAGAGGATTCTGGAGCGGAAGAAGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000559820.1
ENST00000560579.5
ENST00000560676.5
CDS CAA 72 bp CTTCCAGCCCAAGAAGGGCTAAATCTGAGGGTGACATaGCCTCACCTATGCCTGCTGCTAAGAGAGTATAAG +
Preference number: 6 (lower is better)
Translates to: LPAQEGLNLRVT*PHLCLLLREYK
Trigger: CTTATACTCTCTTAGCAGCAGGCATAGGTGAGGCAATGTCACCCTCAGATTTAGCCCTTCTTGGGCTGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp AAGCCAGAAGAGATGCTGCATCAGGGCATGGCTCTATaGTACACCAGTTTTCTCGGTTTATCGCCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: KPEEMLHQGMAL*YTSFLGLSPGS
Trigger: TGACCCAGGCGATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
CDS CAA 72 bp GCATTTGCAGAGCTTACTTCTAGAGATGAGGATGGCTaGTTTCCGACACCAGCTCCTCCTGTCAAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: AFAELTSRDEDG*FPTPAPPVKPS
Trigger: AGAAGGCTTGACAGGAGGAGCTGGTGTCGGAAACAAGCCATCCTCATCTCTAGAAGTAAGCTCTGCAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS CAA 90 bp CTCCCATCCCATGGCTGTAGAATCCATCAAGGCTTTGCCGATCTCTaGACCTGTTTGGCTTTAAAATCTGGGAGAGAGACACATCACTGC +
Preference number: 6 (lower is better)
Translates to: LPSHGCRIHQGFADL*TCLALKSGRETHHC
Trigger: GCAGTGATGTGTCTCTCTCCCAGATTTTAAAGCCAAACAGGTCAAGAGATCGGCAAAGCCTTGATGGATTCTACAGCCATGGGATGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS CAA 90 bp AGCTCTTCGGCATTTGCAGAGCTTACTTCTAGAGATGAGGATGGCTaGTTTCCGACACCAGCTCCTCCTGTCAAGCCTTCTAGACTGAAA +
Preference number: 6 (lower is better)
Translates to: SSSAFAELTSRDEDG*FPTPAPPVKPSRLK
Trigger: TTTCAGTCTAGAAGGCTTGACAGGAGGAGCTGGTGTCGGAAACAAGCCATCCTCATCTCTAGAAGTAAGCTCTGCAAATGCCGAAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS CAA 90 bp ATCCACCAGAGACTCCTTCTTCCGCTCCAGAATCCTCTGGAAGAATaGGCTATGGATACTGATCAGCTCATCCAAACAGGGGAACAGCTT +
Preference number: 6 (lower is better)
Translates to: IHQRLLLPLQNPLEE*AMDTDQLIQTGEQL
Trigger: AAGCTGTTCCCCTGTTTGGATGAGCTGATCAGTATCCATAGCCAATTCTTCCAGAGGATTCTGGAGCGGAAGAAGGAGTCTCTGGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000559820.1
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp ACTGCCTGGACTGTTTGCCAGAGAGAAAGTACTGTCTaGTATTACTGCCTGGTCTGGCACCAGTTCTTTCTC +
Preference number: 6 (lower is better)
Translates to: TAWTVCQRESTV*YYCLVWHQFFL
Trigger: GAGAAAGAACTGGTGCCAGACCAGGCAGTAATATCAGACAGTACTTTCTCTCTGGCAAACAGTCCAGGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp GGAGGGGACAAAAGAAAGTGCGTCATCCTTGGTTACTaGTTCACTGCCTGGACTGTTTGCCAGAGAGAAAGT +
Preference number: 6 (lower is better)
Translates to: GGDKRKCVILGY*FTAWTVCQRES
Trigger: ACTTTCTCTCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCAAGGATGACGCACTTTCTTTTGTCCCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp AGAAAGGCAGAGGATGCACCCGGTGAATTACTTAGCTaGAGTGCTTTGTCCTTGGCACAGTCAGCTGAGATT +
Preference number: 6 (lower is better)
Translates to: RKAEDAPGELLS*SALSLAQSAEI
Trigger: AATCTCAGCTGACTGTGCCAAGGACAAAGCACTTCAGCTAAGTAATTCACCGGGTGCATCCTCTGCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp GCTCTGCCCTTCTGGTCCTTTGTTTGTCTGGCTGGTTaGACTCAGTATGTGAAAAGGCCCCTTATCTTTGTG +
Preference number: 6 (lower is better)
Translates to: ALPFWSFVCLAG*TQYVKRPLIFV
Trigger: CACAAAGATAAGGGGCCTTTTCACATACTGAGTTCAACCAGCCAGACAAACAAAGGACCAGAAGGGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 72 bp CAGAACAGTCTCCATACGGTATTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTCCAGCATTCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: QNSLHTVFHRIN*SRSLVLQHSPR
Trigger: CCGAGGAGAATGCTGGAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAATACCGTATGGAGACTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp GGAACACTGATTTTATCCACAGGCTTACTTGTGACGTaGACGTCAGAGGCTCCAGCTGTGCCAATATTAGAG +
Preference number: 6 (lower is better)
Translates to: GTLILSTGLLVT*TSEAPAVPILE
Trigger: CTCTAATATTGGCACAGCTGGAGCCTCTGACGTGCACGTCACAAGTAAGCCTGTGGATAAAATCAGTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp AGAGCCACTGGCAAACCTAGAACGGCATTCTTCTCTTaGCTCAACAAGACGTTTGGAATCAGGATGTCTTGG +
Preference number: 6 (lower is better)
Translates to: RATGKPRTAFFS*LNKTFGIRMSW
Trigger: CCAAGACATCCTGATTCCAAACGTCTTGTTGAGCCAAGAGAAGAATGCCGTTCTAGGTTTGCCAGTGGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp TTCTTCCGCTCCAGAATCCTCTGGAAGAATTGGCTATaGATACTGATCAGCTCATCCAAACAGGGGAACAGC +
Preference number: 6 (lower is better)
Translates to: FFRSRILWKNWL*ILISSSKQGNS
Trigger: GCTGTTCCCCTGTTTGGATGAGCTGATCAGTATCCATAGCCAATTCTTCCAGAGGATTCTGGAGCGGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000559820.1
ENST00000560579.5
ENST00000560676.5
CDS CCA 72 bp TCAGTCAGATTAGCACTGGTATTGTGGAAGGTACTGTaGAAGGGCCGTGAATTATGCAACTCCTCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SVRLALVLWKVL*KGRELCNSSSS
Trigger: TGAGGAGGAGGAGTTGCATAATTCACGGCCCTTCCACAGTACCTTCCACAATACCAGTGCTAATCTGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612418.1
CDS CAA 72 bp TACTCCACAATCAGGCAAGCTCTGAAGGCAGCTGTCTaGATCAGATACAGTTCCAGAGTCCACAATAGGTGC +
Preference number: 6 (lower is better)
Translates to: YSTIRQALKAAV*IRYSSRVHNRC
Trigger: GCACCTATTGTGGACTCTGGAACTGTATCTGATCAAGACAGCTGCCTTCAGAGCTTGCCTGATTGTGGAGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp TCTTCATTACTAAATGCAAGTGAAGACTCAGCAGGTTaGTTACCATCCAGGGAACTGGCAGCAGGGGCACAG +
Preference number: 6 (lower is better)
Translates to: SSLLNASEDSAG*LPSRELAAGAQ
Trigger: CTGTGCCCCTGCTGCCAGTTCCCTGGATGGTAACAAACCTGCTGAGTCTTCACTTGCATTTAGTAATGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp TCTTTCTGGGAGGGGACAAAAGAAAGTGCGTCATCCTaGGTTACTGATTCACTGCCTGGACTGTTTGCCAGA +
Preference number: 6 (lower is better)
Translates to: SFWEGTKESASS*VTDSLPGLFAR
Trigger: TCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCAAGGATGACGCACTTTCTTTTGTCCCCTCCCAGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp AGACTCCTTCTTCCGCTCCAGAATCCTCTGGAAGAATaGGCTATGGATACTGATCAGCTCATCCAAACAGGG +
Preference number: 6 (lower is better)
Translates to: RLLLPLQNPLEE*AMDTDQLIQTG
Trigger: CCCTGTTTGGATGAGCTGATCAGTATCCATAGCCAATTCTTCCAGAGGATTCTGGAGCGGAAGAAGGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000559820.1
ENST00000560579.5
ENST00000560676.5
CDS CAA 90 bp TCTGCTTGGAAGCCAGAAGAGATGCTGCATCAGGGCATGGCTCTATaGTACACCAGTTTTCTCGGTTTATCTTCAGCAATACCACGTCCA +
Preference number: 6 (lower is better)
Translates to: SAWKPEEMLHQGMAL*YTSFLGLSSAIPRP
Trigger: TGGACGTGGTATTGCTGAAGATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000560676.5
CDS CAA 90 bp AAGAAAGTGCGTCATCCTTGGTTACTGATTCACTGCCTGGACTGTTaGCCAGAGAGAAAGTACTGTCTGATATTACTGCCTGGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: KKVRHPWLLIHCLDC*PERKYCLILLPGLA
Trigger: TGCCAGACCAGGCAGTAATATCAGACAGTACTTTCTCTCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCAAGGATGACGCACTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp TTGTCTTTTGCAGCAGCTGGAATCACCACAGAATTCTaGTCTACTGGAGCATCAGCACTCTCCTCACGACTT +
Preference number: 6 (lower is better)
Translates to: LSFAAAGITTEF*STGASALSSRL
Trigger: AAGTCGTGAGGAGAGTGCTGATGCTCCAGTAGATCAGAATTCTGTGGTGATTCCAGCTGCTGCAAAAGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp GGACTTCTACCATCTCTGGATCTGTCATCCCCATGCTaGTCAGGAATAAACCTTTCTCCTCATGTGCCACTT +
Preference number: 6 (lower is better)
Translates to: GLLPSLDLSSPC*SGINLSPHVPL
Trigger: AAGTGGCACATGAGGAGAAAGGTTTATTCCTGATCAGCATGGGGATGACAGATCCAGAGATGGTAGAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp GGTCCTTTGTTTGTCTGGCTGGTTGAACTCAGTATGTaGAAAGGCCCCTTATCTTTGTGTGTCCGAGAGATG +
Preference number: 6 (lower is better)
Translates to: GPLFVWLVELSM*KGPLSLCVREM
Trigger: CATCTCTCGGACACACAAAGATAAGGGGCCTTTTCACATACTGAGTTCAACCAGCCAGACAAACAAAGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS GCA 72 bp CTGATGGGACCCACAACAGGAATGGAACTGAAAGTGTaGCCGTTGACAGTCTTCTTATCTTTCTCCTTGTCT +
Preference number: 6 (lower is better)
Translates to: LMGPTTGMELKV*PLTVFLSFSLS
Trigger: AGACAAGGAGAAAGATAAGAAGACTGTCAACGGGCACACTTTCAGTTCCATTCCTGTTGTGGGTCCCATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000557852.2
ENST00000560482.5
ENST00000560579.5
ENST00000560676.5
ENST00000612418.1
CDS CCA 72 bp TTTAGGCCACTATCTGATTCCGTTCTCCTAAGATCTTaGCCATCATCTCCCTCTTCCTTCTCGCCTCCTTTT +
Preference number: 6 (lower is better)
Translates to: FRPLSDSVLLRS*PSSPSSFSPPF
Trigger: AAAAGGAGGCGAGAAGGAAGAGGGAGATGATGGCCAAGATCTTAGGAGAACGGAATCAGATAGTGGCCTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000560579.5
CDS CCA 72 bp CTGCTTGGAAGCCAGAAGAGATGCTGCATCAGGGCATaGCTCTATTGTACACCAGTTTTCTCGGTTTATCTT +
Preference number: 6 (lower is better)
Translates to: LLGSQKRCCIRA*LYCTPVFSVYL
Trigger: AAGATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000560676.5
CDS CAA 72 bp GATAGTTTATTTCCACGGAGCAATAGCGGTTTCTCTTaGCTGCCTCGGAACATGGTTACCCACAGATGGAAC +
Preference number: 6 (lower is better)
Translates to: DSLFPRSNSGFS*LPRNMVTHRWN
Trigger: GTTCCATCTGTGGGTAACCATGTTCCGAGGCAGCAAAGAGAAACCGCTATTGCTCCGTGGAAATAAACTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560340.5
CDS CAA 90 bp TTACATCTTCTTCCAGCCCAAGAAGGGCTAAATCTGAGGGTGACATaGCCTCACCTATGCCTGCTGCTAAGAGAGTATAAGGTTCTAATC +
Preference number: 6 (lower is better)
Translates to: LHLLPAQEGLNLRVT*PHLCLLLREYKVLI
Trigger: GATTAGAACCTTATACTCTCTTAGCAGCAGGCATAGGTGAGGCAATGTCACCCTCAGATTTAGCCCTTCTTGGGCTGGAAGAAGATGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp TTTTATTCAGATAGTTTATTTCCACGGAGCAATAGCGGTTTCTCTTaGCTGCCTCGGAACATGGTTACCCACAGATGGAACAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: FYSDSLFPRSNSGFS*LPRNMVTHRWNRLL
Trigger: CAGCAGCCTGTTCCATCTGTGGGTAACCATGTTCCGAGGCAGCAAAGAGAAACCGCTATTGCTCCGTGGAAATAAACTATCTGAATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560340.5
CDS TCA 72 bp GAGTTCTCAAATCTTTCCTTTGTACTTTCCCCTCCCTaGAGCACATTCTTCCAAACAGTGGCATCTGGGTTC +
Preference number: 6 (lower is better)
Translates to: EFSNLSFVLSPP*STFFQTVASGF
Trigger: GAACCCAGATGCCACTGTTTGGAAGAATGTGCTTCAGGGAGGGGAAAGTACAAAGGAAAGATTTGAGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp TCACATCTTTTCGTTGGCCTTTGTTATCCACCACTTTaGAAGGACAAAAATCCGCACGTTCCTGGGTATCCC +
Preference number: 6 (lower is better)
Translates to: SHLFVGLCYPPL*KDKNPHVPGYP
Trigger: GGGATACCCAGGAACGTGCGGATTTTTGTCCTTTCAAAGTGGTGGATAACAAAGGCCAACGAAAAGATGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp AGGAGGTGGTGTTCTCTGCTCTTCCTGCAAAGTTCCTaGAGAGAGAGCATTTTCCTTAATAGAGGAACAGGT +
Preference number: 6 (lower is better)
Translates to: RRWCSLLFLQSS*RESIFLNRGTG
Trigger: ACCTGTTCCTCTATTAAGGAAAATGCTCTCTCTTCAGGAACTTTGCAGGAAGAGCAGAGAACACCACCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp GGGAAGATGATGCTGTCCATGTCATCACTGGGTGAGTaGAAGAGGTCAGAATCACTCCCAGATTCTCTTTTA +
Preference number: 6 (lower is better)
Translates to: GKMMLSMSSLGE*KRSESLPDSLL
Trigger: TAAAAGAGAATCTGGGAGTGATTCTGACCTCTTTCACTCACCCAGTGATGACATGGACAGCATCATCTTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp AAGAGAAAGAAAGTAAGTCCATTGACAATTCACCTCTaGCAAGCCCTGAGAAGCCGAGTAGGAAGGGAGCAA +
Preference number: 6 (lower is better)
Translates to: KRKKVSPLTIHL*QALRSRVGREQ
Trigger: TTGCTCCCTTCCTACTCGGCTTCTCAGGGCTTGTCAGAGGTGAATTGTCAATGGACTTACTTTCTTTCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559278.1
CDS GCA 72 bp GAAGGGCTAAATCTGAGGGTGACATTGCCTCACCTATaGCTGCTGCTAAGAGAGTATAAGGTTCTAATCCAT +
Preference number: 6 (lower is better)
Translates to: EGLNLRVTLPHL*LLLREYKVLIH
Trigger: ATGGATTAGAACCTTATACTCTCTTAGCAGCAGGCATAGGTGAGGCAATGTCACCCTCAGATTTAGCCCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp CAAAAGAAAGTGCGTCATCCTTGGTTACTGATTCACTaGCTGGACTGTTTGCCAGAGAGAAAGTACTGTCTG +
Preference number: 6 (lower is better)
Translates to: QKKVRHPWLLIH*LDCLPERKYCL
Trigger: CAGACAGTACTTTCTCTCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCAAGGATGACGCACTTTCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp TCCTTCACCAGGCTCAAGGACTGTGCTAGATCTTCCTaGTCCACTTCATTGTCTTTGGTACACTGCAATATT +
Preference number: 6 (lower is better)
Translates to: SFTRLKDCARSS*STSLSLVHCNI
Trigger: AATATTGCAGTGTACCAAAGACAATGAAGTGGAGCAGGAAGATCTAGCACAGTCCTTGAGCCTGGTGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS GCA 72 bp GCATGCTATGTGATTTGTAGCATGGTTATCAAGCCATaGCTACGGCACACCAGCTCTTCACTAATTCTAGTC +
Preference number: 6 (lower is better)
Translates to: ACYVICSMVIKP*LRHTSSSLILV
Trigger: GACTAGAATTAGTGAAGAGCTGGTGTGCCGTAGGCATGGCTTGATAACCATGCTACAAATCACATAGCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559391.1
CDS GCA 72 bp GTTTTCTTGTTCACTTGTCTGTTTTGGAGACAGTCTTaGTCTGAGTGGTGTGATGATAGCTCACTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: VFLFTCLFWRQS*SEWCDDSSLQP
Trigger: AGGCTGCAGTGAGCTATCATCACACCACTCAGAGCAAGACTGTCTCCAAAACAGACAAGTGAACAAGAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558092.1
CDS GCA 72 bp CAGAACAGTCTCCATACGGTATTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTCCAGCATTCTCCACAT +
Preference number: 6 (lower is better)
Translates to: QNSLHTVFHRIN*SRSLVLQHSPH
Trigger: ATGTGGAGAATGCTGGAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAATACCGTATGGAGACTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558811.2
CDS GCA 72 bp CAGAACAGTCTCCATACGGTATTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTCCAGCATTCTCCGTTT +
Preference number: 6 (lower is better)
Translates to: QNSLHTVFHRIN*SRSLVLQHSPF
Trigger: AAACGGAGAATGCTGGAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAATACCGTATGGAGACTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558166.2
CDS CCA 72 bp CTGCTTGGAAGCCAGAAGAGATGCTGCATCAGGGCATaGCTCTATTGTACACCAGTTTTCTCGGTTTATATA +
Preference number: 6 (lower is better)
Translates to: LLGSQKRCCIRA*LYCTPVFSVYI
Trigger: TATATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCCAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560579.5
CDS CAA 72 bp TGCAACCAAATCGCCACTAGAAGTCACTGTGTTCTGTaGACATGCAGAGTCTGCACAAAGTTTATCGTCTCC +
Preference number: 6 (lower is better)
Translates to: CNQIATRSHCVL*TCRVCTKFIVS
Trigger: GGAGACGATAAACTTTGTGCAGACTCTGCATGTCAACAGAACACAGTGACTTCTAGTGGCGATTTGGTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp CATGGCTGTAGAATCCATCAAGGCTTTGCCGATCTCTaGACCTGTTTGGCTTTAAAATCTGGGAGAGAGACA +
Preference number: 6 (lower is better)
Translates to: HGCRIHQGFADL*TCLALKSGRET
Trigger: TGTCTCTCTCCCAGATTTTAAAGCCAAACAGGTCAAGAGATCGGCAAAGCCTTGATGGATTCTACAGCCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000559486.2
ENST00000560579.5
ENST00000560676.5
CDS CAA 72 bp TCTTCTGTTATACTCTCAGTCAGATTAGCACTGGTATaGTGGAAGGTACTGTGGAAGGGCCGTGAATTGTCC +
Preference number: 6 (lower is better)
Translates to: SSVILSVRLALV*WKVLWKGRELS
Trigger: GGACAATTCACGGCCCTTCCACAGTACCTTCCACAATACCAGTGCTAATCTGACTGAGAGTATAACAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560579.5
ENST00000560676.5
CDS CAA 90 bp TTCTCTTGGCTCAACAAGACGTTTGGAATCAGGATGTCTTGGGTGTaGTGTGATATATTCTCTCTTCTGGGCTCAGCCATACCTTGTAGA +
Preference number: 6 (lower is better)
Translates to: FSWLNKTFGIRMSWV*CDIFSLLGSAIPCR
Trigger: TCTACAAGGTATGGCTGAGCCCAGAAGAGAGAATATATCACACAACACCCAAGACATCCTGATTCCAAACGTCTTGTTGAGCCAAGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp CTGGCAAACCTAGAACGGCATTCTTCTCTTGGCTCAACAAGACGTTaGGAATCAGGATGTCTTGGGTGTTGTGTGATATATTCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: LANLERHSSLGSTRR*ESGCLGCCVIYSLF
Trigger: GAAGAGAGAATATATCACACAACACCCAAGACATCCTGATTCCAAACGTCTTGTTGAGCCAAGAGAAGAATGCCGTTCTAGGTTTGCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp AACTTGCTGTCTATTATCCGACTCCAAGACTCTGCTTCCAGCTGTTaGGACTCAATCTCAAAGTCTCCCAGTAGTTGTCCTTCATTCATG +
Preference number: 6 (lower is better)
Translates to: NLLSIIRLQDSASSC*DSISKSPSSCPSFM
Trigger: CATGAATGAAGGACAACTACTGGGAGACTTTGAGATTGAGTCCAAACAGCTGGAAGCAGAGTCTTGGAGTCGGATAATAGACAGCAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp ATCACTCCCAGATTCTCTTTTAAGTACACCTTGTTTTaGGGTACACTCTCTGCCCAGTCCAACATCCAGGAA +
Preference number: 6 (lower is better)
Translates to: ITPRFSFKYTLF*GTLSAQSNIQE
Trigger: TTCCTGGATGTTGGACTGGGCAGAGAGTGTACCTCAAAACAAGGTGTACTTAAAAGAGAATCTGGGAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560340.5
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp TGTGGAAGGGCCGTGAATTGTCCAATCCAGGATGGCTaGTTGTCATTAATGAGATGGATTTTGTCAATGGAG +
Preference number: 6 (lower is better)
Translates to: CGRAVNCPIQDG*LSLMRWILSME
Trigger: CTCCATTGACAAAATCCATCTCATTAATGACAATCAGCCATCCTGGATTGGACAATTCACGGCCCTTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp GTTTGTAGATCATATAAATTCTCACCATGCAAACTCTaGTCTGTCCCCAATACATTCCACTCCGTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: VCRSYKFSPCKL*SVPNTFHSVGS
Trigger: GCTGCCCACGGAGTGGAATGTATTGGGGACAGATCAGAGTTTGCATGGTGAGAATTTATATGATCTACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS GCA 72 bp GCTTTCGGACTCGCTAACTATGTTATCACACAGTTTTaGAACCAAATCGCCACTAGAAGTCACTGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: AFGLANYVITQF*NQIATRSHCVL
Trigger: CAGAACACAGTGACTTCTAGTGGCGATTTGGTTGCAAAACTGTGTGATAACATAGTTAGCGAGTCCGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS GCA 72 bp TGTCTACAGCTGGTAACAGGTGGTGGTATAGAAGTGTaGATCAAACTGACCTTTAAAGACTTCAGGAGCCAA +
Preference number: 6 (lower is better)
Translates to: CLQLVTGGGIEV*IKLTFKDFRSQ
Trigger: TTGGCTCCTGAAGTCTTTAAAGGTCAGTTTGATGCACACTTCTATACCACCACCTGTTACCAGCTGTAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560340.5
CDS CCA 72 bp TCTGTTATACTCTCAGTCAGATTAGCACTGGTATTGTaGAAGGTACTGTGGAAGGGCCGTGAATTGTCCAAT +
Preference number: 6 (lower is better)
Translates to: SVILSVRLALVL*KVLWKGRELSN
Trigger: ATTGGACAATTCACGGCCCTTCCACAGTACCTTCCACAATACCAGTGCTAATCTGACTGAGAGTATAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560579.5
ENST00000560676.5
CDS CCA 72 bp TCTGTTATACTCTCAGTCAGATTAGCACTGGTATTGTaGAAGGTACTGTGGAAGGGCCGTGAATTATGCAAC +
Preference number: 6 (lower is better)
Translates to: SVILSVRLALVL*KVLWKGRELCN
Trigger: GTTGCATAATTCACGGCCCTTCCACAGTACCTTCCACAATACCAGTGCTAATCTGACTGAGAGTATAACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612418.1
CDS CAA 72 bp CTCAACAAGACGTTTGGAATCAGGATGTCTTGGGTGTaGTGTGATATATTCTCTCTTCTGGGCTCAGCCATA +
Preference number: 6 (lower is better)
Translates to: LNKTFGIRMSWV*CDIFSLLGSAI
Trigger: TATGGCTGAGCCCAGAAGAGAGAATATATCACACAACACCCAAGACATCCTGATTCCAAACGTCTTGTTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 72 bp AAGCCAGAAGAGATGCTGCATCAGGGCATGGCTCTATaGTACACCAGTTTTCTCGGTTTATCTTCAGCAATA +
Preference number: 6 (lower is better)
Translates to: KPEEMLHQGMAL*YTSFLGLSSAI
Trigger: TATTGCTGAAGATAAACCGAGAAAACTGGTGTACAATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000560676.5
CDS CAA 72 bp GTGAGTCTGTTGAATGAGACAGGAATTTCCAGGTGTTaGACATGTTCTCATCATTGCCAACTCTGGGGACAA +
Preference number: 6 (lower is better)
Translates to: VSLLNETGISRC*TCSHHCQLWGQ
Trigger: TTGTCCCCAGAGTTGGCAATGATGAGAACATGTCAAACACCTGGAAATTCCTGTCTCATTCAACAGACTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558644.2
CDS CAA 72 bp TCTTCTGTTATACTCTCAGTCAGATTAGCACTGGTATaGTGGAAGGTACTGTGGAAGGGCCGTGAATTATGC +
Preference number: 6 (lower is better)
Translates to: SSVILSVRLALV*WKVLWKGRELC
Trigger: GCATAATTCACGGCCCTTCCACAGTACCTTCCACAATACCAGTGCTAATCTGACTGAGAGTATAACAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612418.1
CDS CAA 90 bp AAATGGGTGAGGATTTGCCCTTTTGGCTTTGAGCATGAGATGAATTaGTTTCTGAGTTCTGGTGTGGCATTACATCTTCTTCCAGCCCAA +
Preference number: 6 (lower is better)
Translates to: KWVRICPFGFEHEMN*FLSSGVALHLLPAQ
Trigger: TTGGGCTGGAAGAAGATGTAATGCCACACCAGAACTCAGAAACAAATTCATCTCATGCTCAAAGCCAAAAGGGCAAATCCTCACCCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp ACACAGTTTTGCAACCAAATCGCCACTAGAAGTCACTGTGTTCTGTaGACATGCAGAGTCTGCACAAAGTTTATCGTCTCCAGTTGTAGA +
Preference number: 6 (lower is better)
Translates to: TQFCNQIATRSHCVL*TCRVCTKFIVSSCR
Trigger: TCTACAACTGGAGACGATAAACTTTGTGCAGACTCTGCATGTCAACAGAACACAGTGACTTCTAGTGGCGATTTGGTTGCAAAACTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp TTATCTAGTTTCACATCTTTTCGTTGGCCTTTGTTATCCACCACTTaGAAAGGACAAAAATCCGCACGTTCCTGGGTATCCCTTACAGGG +
Preference number: 6 (lower is better)
Translates to: LSSFTSFRWPLLSTT*KGQKSARSWVSLTG
Trigger: CCCTGTAAGGGATACCCAGGAACGTGCGGATTTTTGTCCTTTCAAAGTGGTGGATAACAAAGGCCAACGAAAAGATGTGAAACTAGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp GTACTGTGGAAGGGCCGTGAATTGTCCAATCCAGGATaGCTGATTGTCATTAATGAGATGGATTTTGTCAAT +
Preference number: 6 (lower is better)
Translates to: VLWKGRELSNPG*LIVINEMDFVN
Trigger: ATTGACAAAATCCATCTCATTAATGACAATCAGCCATCCTGGATTGGACAATTCACGGCCCTTCCACAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000559362.5
ENST00000560579.5
ENST00000560676.5
CDS CAA 72 bp CTAGAACGGCATTCTTCTCTTGGCTCAACAAGACGTTaGGAATCAGGATGTCTTGGGTGTTGTGTGATATAT +
Preference number: 6 (lower is better)
Translates to: LERHSSLGSTRR*ESGCLGCCVIY
Trigger: ATATATCACACAACACCCAAGACATCCTGATTCCAAACGTCTTGTTGAGCCAAGAGAAGAATGCCGTTCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CAA 90 bp ACTTCTTGCCGTTTGACCACATCTTTCTTTTGCTGTTTTAGAAACTaGCTGTCTATTATCCGACTCCAAGACTCTGCTTCCAGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: TSCRLTTSFFCCFRN*LSIIRLQDSASSCL
Trigger: CAAACAGCTGGAAGCAGAGTCTTGGAGTCGGATAATAGACAGCAAGTTTCTAAAACAGCAAAAGAAAGATGTGGTCAAACGGCAAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp AGCTTCTTCCGTTTCAAATCTTCCTTGGCAAACATCTaGCCACTCTTCATCCTCATGATTGACTTGCTATCT +
Preference number: 6 (lower is better)
Translates to: SFFRFKSSLANI*PLFILMIDLLS
Trigger: AGATAGCAAGTCAATCATGAGGATGAAGAGTGGTCAGATGTTTGCCAAGGAAGATTTGAAACGGAAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS GCA 72 bp TGTGCTGTCATCATTAAGGGCATAAGACTGTCCATCTaGTTGAGGTTTGTTTTCATTAGTTGCTGTTGGATG +
Preference number: 6 (lower is better)
Translates to: CAVIIKGIRLSI*LRFVFISCCWM
Trigger: CATCCAACAGCAACTAATGAAAACAAACCTCAAGCAGATGGACAGTCTTATGCCCTTAATGATGACAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000558166.2
ENST00000558811.2
ENST00000559362.5
CDS CCA 72 bp CACCCGGTGAATTACTTAGCTGAAGTGCTTTGTCCTTaGCACAGTCAGCTGAGATTGATTTTTCATGAAATT +
Preference number: 6 (lower is better)
Translates to: HPVNYLAEVLCP*HSQLRLIFHEI
Trigger: AATTTCATGAAAAATCAATCTCAGCTGACTGTGCCAAGGACAAAGCACTTCAGCTAAGTAATTCACCGGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS CCA 72 bp AGTATGCCACAACGCCCAGGTTCTGTTATCAAAACTTaGCTAAGTTTCCTTAGATCCGTCACTAATGTTTTC +
Preference number: 6 (lower is better)
Translates to: SMPQRPGSVIKT*LSFLRSVTNVF
Trigger: GAAAACATTAGTGACGGATCTAAGGAAACTTAGCCAAGTTTTGATAACAGAACCTGGGCGTTGTGGCATACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558092.1
CDS CAA 72 bp CGTTTGACCACATCTTTCTTTTGCTGTTTTAGAAACTaGCTGTCTATTATCCGACTCCAAGACTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: RLTTSFFCCFRN*LSIIRLQDSAS
Trigger: GGAAGCAGAGTCTTGGAGTCGGATAATAGACAGCAAGTTTCTAAAACAGCAAAAGAAAGATGTGGTCAAACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS CAA 72 bp TCAAGCAGAATCCAATGCCTTGAACTGACTGAGAACTaGCTGATAACTTCAGAGTGCTGGAAAGATGAATGT +
Preference number: 6 (lower is better)
Translates to: SSRIQCLELTEN*LITSECWKDEC
Trigger: ACATTCATCTTTCCAGCACTCTGAAGTTATCAGCAAGTTCTCAGTCAGTTCAAGGCATTGGATTCTGCTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560676.5
CDS CAA 90 bp CTGCTAAGAGAGTATAAGGTTCTAATCCATCTGAAATCTTGTCTTTaGCAGCAGCTGGAATCACCACAGAATTCTGATCTACTGGAGCAT +
Preference number: 6 (lower is better)
Translates to: LLREYKVLIHLKSCL*QQLESPQNSDLLEH
Trigger: ATGCTCCAGTAGATCAGAATTCTGTGGTGATTCCAGCTGCTGCAAAAGACAAGATTTCAGATGGATTAGAACCTTATACTCTCTTAGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp TTTTTCAGTGGAGGTTTCTTCATTACTAAATGCAAGTaGAGACTCAGCAGGTTTGTTACCATCCAGGGAACT +
Preference number: 6 (lower is better)
Translates to: FFSGGFFITKCK*RLSRFVTIQGT
Trigger: AGTTCCCTGGATGGTAACAAACCTGCTGAGTCTTCACTTGCATTTAGTAATGAAGAAACCTCCACTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394518.7
ENST00000559362.5
CDS TCA 72 bp AGGCTTGAAAACGCTTATCCTTGGCATAAAGGTCTTTaGAGTAGTTTACAGACTGGTTATGTTGCCCACAAA +
Preference number: 6 (lower is better)
Translates to: RLENAYPWHKGL*SSLQTGYVAHK
Trigger: TTTGTGGGCAACATAACCAGTCTGTAAACTACTTCAAAGACCTTTATGCCAAGGATAAGCGTTTTCAAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558009.1
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS TCA 72 bp CAATATGCACTCTGGAATTCCAAGCCTTCTAACAACTaGACTGCTCATCTTCTTCTTTACAAAGGCTTGAAA +
Preference number: 6 (lower is better)
Translates to: QYALWNSKPSNN*TAHLLLYKGLK
Trigger: TTTCAAGCCTTTGTAAAGAAGAAGATGAGCAGTTCAGTTGTTAGAAGGCTTGGAATTCCAGAGTGCATATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS GCA 72 bp AGTAGTTTACAGACTGGTTATGTTGCCCACAAAACTTaGCATATGTCTTCTTTAAACGTTCTGCATTCTCAC +
Preference number: 6 (lower is better)
Translates to: SSLQTGYVAHKT*HMSSLNVLHSH
Trigger: GTGAGAATGCAGAACGTTTAAAGAAGACATATGGCAAGTTTTGTGGGCAACATAACCAGTCTGTAAACTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558009.1
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS GCA 72 bp ATAAATCTCATTGAGACGCACTTTCTTTTCATAACTTaGCACTTTGCTGTCTACAGCTCCAATCACATCCTT +
Preference number: 6 (lower is better)
Translates to: INLIETHFLFIT*HFAVYSSNHIL
Trigger: AAGGATGTGATTGGAGCTGTAGACAGCAAAGTGGCAAGTTATGAAAAGAAAGTGCGTCTCAATGAGATTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000558644.2
ENST00000560579.5
ENST00000560676.5
CDS CAA 90 bp AAAAAGAAATCAAGCAGAATCCAATGCCTTGAACTGACTGAGAACTaGCTGATAACTTCAGAGTGCTGGAAAGATGAATGTAGAACTCAT +
Preference number: 6 (lower is better)
Translates to: KKKSSRIQCLELTEN*LITSECWKDECRTH
Trigger: ATGAGTTCTACATTCATCTTTCCAGCACTCTGAAGTTATCAGCAAGTTCTCAGTCAGTTCAAGGCATTGGATTCTGCTTGATTTCTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560676.5
CDS CCA 72 bp TGGTTTAAGAGTATGGGATTTGAAACCAAAGAGATCTaGTTTGAACTACTTCTTCACATTAGAGGAGTATCC +
Preference number: 6 (lower is better)
Translates to: WFKSMGFETKEI*FELLLHIRGVS
Trigger: GGATACTCCTCTAATGTGAAGAAGTAGTTCAAACCAGATCTCTTTGGTTTCAAATCCCATACTCTTAAACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560957.1
CDS CAA 72 bp AATAAATACCACCTAATGCTATACTTTGTGCAGATCTaGACTGAAAGAGAAGCAAACACCGTTTCCATCACT +
Preference number: 6 (lower is better)
Translates to: NKYHLMLYFVQI*TEREANTVSIT
Trigger: AGTGATGGAAACGGTGTTTGCTTCTCTTTCAGTCAAGATCTGCACAAAGTATAGCATTAGGTGGTATTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560676.5
CDS CAA 90 bp ATGGAACTGAAAGTGTGCCCGTTGACAGTCTTCTTATCTTTCTCCTaGTCTTTAGAATCTTTCTCCTTCTCCTTAATCTTATCTTTTTCT +
Preference number: 6 (lower is better)
Translates to: MELKVCPLTVFLSFS*SLESFSFSLILSFS
Trigger: AGAAAAAGATAAGATTAAGGAGAAGGAGAAAGATTCTAAAGACAAGGAGAAAGATAAGAAGACTGTCAACGGGCACACTTTCAGTTCCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
ENST00000557852.2
ENST00000560482.5
ENST00000560579.5
ENST00000560676.5
ENST00000612418.1