RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP13 (Homo sapiens)

Ensembl gene IDs: ENSG00000170776

Ensembl transcript IDs: ENST00000361243.6, ENST00000394510.6, ENST00000394518.7, ENST00000557852.2, ENST00000558009.1, ENST00000558092.1, ENST00000558166.2, ENST00000558644.2, ENST00000558811.2, ENST00000559278.1, ENST00000559362.5, ENST00000559391.1, ENST00000559486.2, ENST00000559820.1, ENST00000560256.1, ENST00000560302.5, ENST00000560340.5, ENST00000560482.5, ENST00000560571.1, ENST00000560579.5, ENST00000560676.5, ENST00000560957.1, ENST00000612418.1

Found 1685 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCCCTGGCAGTGGTGTGCCCTCACCCAGCAAGGGCCAGACAGCTaGTGTCTGGGAGAGGCACGACGGGGGCTCAGGAACACAGCCAGG +
Preference number: 1 (lower is better)
Translates to: DPWQWCALTQQGPDS*CLGEARRGLRNTAR
Trigger: CCTGGCTGTGTTCCTGAGCCCCCGTCGTGCCTCTCCCAGACAGCAGCTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp TCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCAGGAG +
Preference number: 1 (lower is better)
Translates to: SRTWGRPGGLDAEEQ*ASSVRDLCTRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp AGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCAGTaGTGTGCCCTCACCCAGCAAGGGCCAGACAGCTGCTGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: STASAWPGCEADPWQ*CALTQQGPDSCCLG
Trigger: TCCCAGACAGCAGCTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GTCCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTaGCCCCTGGCAGTGGTGTGCCCTCACCCAGCAAGGGCCAGACAG +
Preference number: 1 (lower is better)
Translates to: VLASEHSFCLAWVRG*PLAVVCPHPARARQ
Trigger: CTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp CTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTaGCAGTGGTGTGCCCTCACCCAGCAAGGGCCAGACAGCTGCTGT +
Preference number: 1 (lower is better)
Translates to: LQSTASAWPGCEADP*QWCALTQQGPDSCC
Trigger: ACAGCAGCTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp ATGCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCCC +
Preference number: 1 (lower is better)
Translates to: MRGLRVRPGTALVLS*PDAWCRLGLLLAFP
Trigger: GGGGAATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp GGGGTGAGTGCTTCCTGCAGAAGCCCCTCCGGACTGCAGCACAGGTaGTCCCACCTGGTTGTAGGGCAGGTCACTCACTTCGGTGGCAGG +
Preference number: 1 (lower is better)
Translates to: GVSASCRSPSGLQHR*SHLVVGQVTHFGGR
Trigger: CCTGCCACCGAAGTGAGTGACCTGCCCTACAACCAGGTGGGACCACCTGTGCTGCAGTCCGGAGGGGCTTCTGCAGGAAGCACTCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp TTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTaGGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGG +
Preference number: 1 (lower is better)
Translates to: LLIVQDLGPPRRTGR*GAVGVQCKRLVHAG
Trigger: CCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp CCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGGCTCCGGGTCCGTCCAGGCACTGCC +
Preference number: 1 (lower is better)
Translates to: PGMGLEGNQSLRSTG*TADMRGLRVRPGTA
Trigger: GGCAGTGCCTGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp AAGCCTGAACCACAGGCAGACTCACCAGGCACGCCCCATGGCCTGTaGTCATGCCCTCAGGTGGTGACGAAAGGTAGGGGAAGCTCAGGC +
Preference number: 1 (lower is better)
Translates to: KPEPQADSPGTPHGL*SCPQVVTKGRGSSG
Trigger: GCCTGAGCTTCCCCTACCTTTCGTCACCACCTGAGGGCATGAGCACAGGCCATGGGGCGTGCCTGGTGAGTCTGCCTGTGGTTCAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCT +
Preference number: 1 (lower is better)
Translates to: GFRGKPVSEEYWVNC*YAGAPGPSRHCPCA
Trigger: AGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCTCTAAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp CAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATATCATCTGTTaGTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCT +
Preference number: 1 (lower is better)
Translates to: QSLGLLPHPTLNIIC*LLSRTWGRPGGLDA
Trigger: AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp ACGCCTTCCGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTaGTACACATGGCTTCACCCTTCGCCTGAACCCACTTCTCAGCCA +
Preference number: 1 (lower is better)
Translates to: TPSGPAPLQICTGRN*YTWLHPSPEPTSQP
Trigger: TGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCGGAAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp GGCGCTTTCACAACCACGCCTTCCGGGCCAGCTCCTCTCCAGATCTaGACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGCCTGAA +
Preference number: 1 (lower is better)
Translates to: GAFTTTPSGPAPLQI*TGRNCYTWLHPSPE
Trigger: TTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCGGAAGGCGTGGTTGTGAAAGCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp GGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATaGCTTCACCCTTCGCCTGAACCCACTTCTCAGCCAGCTGTCCTA +
Preference number: 1 (lower is better)
Translates to: GPAPLQICTGRNCYT*LHPSPEPTSQPAVL
Trigger: TAGGACAGCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp GGCACCCGGCCTACATTTACAAGGAGAAGAATGCAGGTTCAGTACTaGCCTCCTGCAAATCCCAGGAGGGGAACTCGGAGCCAGTGCCCA +
Preference number: 1 (lower is better)
Translates to: GTRPTFTRRRMQVQY*PPANPRRGTRSQCP
Trigger: TGGGCACTGGCTCCGAGTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAAATGTAGGCCGGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp GGTCCTGCTGAAGGAAGGCAAGGCACACAGATCTCCAGCAGCCGCTaGCCCAATTCCATCCACAGGGTTATTTCTAGGCTCCCACATTCC +
Preference number: 1 (lower is better)
Translates to: GPAEGRQGTQISSSR*PNSIHRVISRLPHS
Trigger: GGAATGTGGGAGCCTAGAAATAACCCTGTGGATGGAATTGGGGCAGCGGCTGCTGGAGATCTGTGTGCCTTGCCTTCCTTCAGCAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTT +
Preference number: 1 (lower is better)
Translates to: DLHWQELLHMASPFA*THFSASCPSFRAQL
Trigger: AAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp CCCACATTCCAAGGACATCCAAAACGCAGAGGGTGCACATCGTTCTaGAGTGTCTGGGGTCACCTCACAGCCACCCTCTTTGTGACCACT +
Preference number: 1 (lower is better)
Translates to: PTFQGHPKRRGCTSF*SVWGHLTATLFVTT
Trigger: AGTGGTCACAAAGAGGGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGATGTGCACCCTCTGCGTTTTGGATGTCCTTGGAATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GAGGCCATTACTTTCAGTGTAATCCTGAGTAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGTCTGG +
Preference number: 1 (lower is better)
Translates to: EAITFSVILSRASPT*ESWAVTNHGRSRVW
Trigger: CCAGACTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCTACTCAGGATTACACTGAAAGTAATGGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp CAAGACAGGCCATTAGATCCAGCAACTAGAGCACTGTCAAGGCCATaGGCAAAAGCACAGGCAGCCACCATCCCAGGTAAATCCCCAGGA +
Preference number: 1 (lower is better)
Translates to: QDRPLDPATRALSRP*AKAQAATIPGKSPG
Trigger: TCCTGGGGATTTACCTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTGCTGGATCTAATGGCCTGTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GCTCTGTGGCGACGTGCTCTAACTTCAGCATCCACGGTGTTTTTGTaGAGAGCACGTACGCAAGTAAATCCCATCAGCACCAACCTCGTA +
Preference number: 1 (lower is better)
Translates to: ALWRRALTSASTVFL*RARTQVNPISTNLV
Trigger: TACGAGGTTGGTGCTGATGGGATTTACTTGCGTACGTGCTCTTCACAAAAACACCGTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp TCCCACCCTCTACTAAGGCAGGGTCTATCTAGTTCAACCCTTGCATaGACTAACACCTCCCCTCCCACATCAAGAAACAACGCCAAAGGT +
Preference number: 1 (lower is better)
Translates to: SHPLLRQGLSSSTLA*TNTSPPTSRNNAKG
Trigger: ACCTTTGGCGTTGTTTCTTGATGTGGGAGGGGAGGTGTTAGTGCATGCAAGGGTTGAACTAGATAGACCCTGCCTTAGTAGAGGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GGGTGGACTCTACAGGGCAATGGTGTGACTGACCAGCTCTTTCATTaGAGACATAGAAAGTACAAGCAGACCCTTCTGGCAGGAGCTCTA +
Preference number: 1 (lower is better)
Translates to: GWTLQGNGVTDQLFH*RHRKYKQTLLAGAL
Trigger: TAGAGCTCCTGCCAGAAGGGTCTGCTTGTACTTTCTATGTCTTCAATGAAAGAGCTGGTCAGTCACACCATTGCCCTGTAGAGTCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 90 bp GTGGTTTCTCAGAGCACACCCTGTTCTCATGCTCCTCCCACTCACTaGCCAATCTTTCCTCTCCTTCACTTCCAGGCTATCTTTAGAGAA +
Preference number: 1 (lower is better)
Translates to: VVSQSTPCSHAPPTH*PIFPLLHFQAIFRE
Trigger: TTCTCTAAAGATAGCCTGGAAGTGAAGGAGAGGAAAGATTGGGCAGTGAGTGGGAGGAGCATGAGAACAGGGTGTGCTCTGAGAAACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CCA 90 bp GCCTCAGAGGGCAACATTACCATGAACTGTCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAACAAAGATGAAAACACGGTGGGAAAA +
Preference number: 1 (lower is better)
Translates to: ASEGNITMNCPAHTS*GKPQVNKDENTVGK
Trigger: TTTTCCCACCGTGTTTTCATCTTTGTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTAATGTTGCCCTCTGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp AAAAGACACAGAGTGAACAGTGCTGGCTGCCACTTCACTCGGTATTaGCTGGATAGTTTAGACTGTTGGGCTAGACCTGGCTCACCCTTA +
Preference number: 1 (lower is better)
Translates to: KRHRVNSAGCHFTRY*LDSLDCWARPGSPL
Trigger: TAAGGGTGAGCCAGGTCTAGCCCAACAGTCTAAACTATCCAGTCAATACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 90 bp GGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCACGGTGTTTTTGTGAAGAGCACGTAC +
Preference number: 1 (lower is better)
Translates to: GVRDPLTLMSSSVAT*SNFSIHGVFVKSTY
Trigger: GTACGTGCTCTTCACAAAAACACCGTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp GGTTCTGTTGCTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTaGTTTGAGGGAATTCCGGGCACTACTTTGATTTTAAACTTGTCC +
Preference number: 1 (lower is better)
Translates to: GSVAALQTVFLDEVG*FEGIPGTTLILNLS
Trigger: GGACAAGTTTAAAATCAAAGTAGTGCCCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAGCAACAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp CATAGGGAGGGCCAACAGATAAAGTCAGTAAGAGTGACACTAACCTaGTTAAGGAAGTGTGTGGTTTCTCAGAGCACACCCTGTTCTCAT +
Preference number: 1 (lower is better)
Translates to: HREGQQIKSVRVTLT*LRKCVVSQSTPCSH
Trigger: ATGAGAACAGGGTGTGCTCTGAGAAACCACACACTTCCTTAACCAGGTTAGTGTCACTCTTACTGACTTTATCTGTTGGCCCTCCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 90 bp GGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTaGACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTT +
Preference number: 1 (lower is better)
Translates to: GCFVALVPETPRSRW*TSRLLYTSSLLSLV
Trigger: AACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTaGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTG +
Preference number: 1 (lower is better)
Translates to: MGCFVALVPETPRSR*CTSRLLYTSSLLSL
Trigger: CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp TTAAAATTTCATCTGGGCCTTCAAGGCACTTCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACTTCACTCGGTATTGACTGGATAGTT +
Preference number: 1 (lower is better)
Translates to: LKFHLGLQGTSKDTE*TVLAATSLGIDWIV
Trigger: AACTATCCAGTCAATACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGAAGTGCCTTGAAGGCCCAGATGAAATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 90 bp GATGACAGAATGAGATACTATGGGTTGTTTTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACAC +
Preference number: 1 (lower is better)
Translates to: DDRMRYYGLFCCFSA*NTEIEVVHITSFIH
Trigger: GTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGTATCTCATTCTGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTaGGTAAACATGCTGGAAAACCAGGATATTTCTTCTGGATCTGAT +
Preference number: 1 (lower is better)
Translates to: IMVSRPLHFIHGQNM*VNMLENQDISSGSD
Trigger: ATCAGATCCAGAAGAAATATCCTGGTTTTCCAGCATGTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CAA 90 bp TATGCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCC +
Preference number: 2 (lower is better)
Translates to: YAGAPGPSRHCPCAK*TRRLVQTGPSSGIP
Trigger: GGGAATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGCATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 2 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 90 bp CTGGGCCTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: LGLLPHPTLNIICCL*SRTWGRPGGLDAEE
Trigger: CTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CAA 90 bp GCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATATCATCTGTaGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGC +
Preference number: 2 (lower is better)
Translates to: AESGPPSPPDTQYHL*LIVQDLGPPRRTGR
Trigger: GCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATCAGAGCACAGCTTCTaGCTGGCCTGGGTGCGAGGC +
Preference number: 2 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQESEHSF*LAWVRG
Trigger: GCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCCTTCTGAGTGGTCAGTaGCAATCAAAAGGTGTCACG +
Preference number: 2 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGLLSGQ*QSKGVT
Trigger: CGTGACACCTTTTGATTGTCACTGACCACTCAGAAG...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 2 (lower is better)
Translates to: RASSSPDLHWQELLHMASGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 2 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNLLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGGCCTTTAGGAATTCCTaGCGTGTCCAAAACCATCAC +
Preference number: 2 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQAFRNS*RVQNHH
Trigger: GTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGC...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGA +
Preference number: 2 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAALVLS*PDAWCR
Trigger: TCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CAA 90 bp CTGCAGTGTCTGGGGTCACCTCACAGCCACCCTCTTTGTGACCACTaGAAGCCCATTCACCAGGACTGTCTTTCTAAACTCCCTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LQCLGSPHSHPLCDH*KPIHQDCLSKLPPR
Trigger: CCTGGGAGGGAGTTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCTGTGAGGTGACCCCAGACACTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGG +
Preference number: 2 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILRSTG*TADMRG
Trigger: CCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCATGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 2 (lower is better)
Translates to: RASSSPDLHWQELLHMASCCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRASPFA*THFSAS
Trigger: GCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGC...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACT +
Preference number: 2 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQESKDTE*TVLAAT
Trigger: AGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 2 (lower is better)
Translates to: SSSPDLHWQELLHMASPFHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 2 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCGCACTGTCAAGGCCATaGGCAAAAGCACAGGCAGCC +
Preference number: 2 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVALSRP*AKAQAA
Trigger: GGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGC...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 2 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCCGAGATCGAGGTGGTaGACATCACGTCTTTTATAC +
Preference number: 2 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCPRSRW*TSRLLY
Trigger: GTATAAAAGACGTGATGTGCACCACCTCGATCTCGG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 2 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQDWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 2 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLDWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 2 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAAC +
Preference number: 2 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCPAHTS*GKPQVN
Trigger: GTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGG...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAAAGGTAGGTCAGAGGTaGCGAGTTTCTTCATTCTCA +
Preference number: 2 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEKVGQR*RVSSFS
Trigger: TGAGAATGAAGAAACTCGCCACCTCTGACCTACCTT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACA +
Preference number: 2 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRRASPT*ESWAVT
Trigger: TGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 2 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSCCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTTCCCCGTGTGTATATaGAGACAGGTCCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEFPVCI*RQVPMY
Trigger: GTACATGGGGACCTGTCTGCATATACACACGGGGAA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCAC +
Preference number: 2 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVSSVAT*SNFSIH
Trigger: GTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCT...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 2 (lower is better)
Translates to: DVSKTITCTYEAITFSVIGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCAGGAACTGCTACACATaGCTTCACCCTTCGCCTGAA +
Preference number: 2 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSRNCYT*LHPSPE
Trigger: TTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCT...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTTTCCCCGTGTGTATATaGAGACAGGTCCCCATGTAC +
Preference number: 2 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCFPVCI*RQVPMY
Trigger: GTACATGGGGACCTGTCTGCATATACACACGGGGAA...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 2 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCATCAGTACTGCCCTCCTaGAAATCCCAGGAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSSVLPS*KSQEGN
Trigger: GTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGA...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGTTCTGTTGCTGCACTaGAGACTGTATTCCTGGATG +
Preference number: 2 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSVLLLH*RLYSWM
Trigger: CATCCAGGAATACAGTCTGCAGTGCAGCAACAGAAC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 2 (lower is better)
Translates to: FQPLGIPDVSKTITCTYELLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGGTTCAGACCTTACTTaGATACACTCTTTCAGCCTT +
Preference number: 2 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLGSDLT*IHSFSL
Trigger: AAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAAGACCCACAGGAAGGTaGCGTGCCACTCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQRPTGR*RATLLG
Trigger: CCCAAGGAGAGTGGCACGTCACCTTCCTGTGGGTCT...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 2 (lower is better)
Translates to: YADRSPCTYTDQVQNICCGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCCAAATCGTTTTGAGTaGGGTCTGGGCAGATGTGAA +
Preference number: 2 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVPNRFE*GLGRCE
Trigger: TTCACATCTGCCCAGACCCCACTCAAAACGATTTGG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGAGGGAAACCAGTCTCTaGGGAGTACTGGGTGAACTG +
Preference number: 2 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLRETSL*GVLGEL
Trigger: CAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGGCGGGTGGATTGCCTaGGCTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSGGWIA*AQEFKT
Trigger: GGTCTTGAACTCCTGAGCTCAGGCAATCCACCCGCC...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGATAAATATCTCCATCTaGAAGGCCAGCTTGCAATTC +
Preference number: 2 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQINISI*KASLQF
Trigger: GAATTGCAAGCTGGCCTTGCAGATGGAGATATTTAT...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGAAGGTAGGTCAGAGGTaGCGAGTTTCTTCATTCTCA +
Preference number: 2 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRKVGQR*RVSSFS
Trigger: TGAGAATGAAGAAACTCGCCACCTCTGACCTACCTT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAAGGTGGAGGCTGCAGTaGGCCGAGATCATGCCACTG +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATERWRLQ*AEIMPL
Trigger: CAGTGGCATGATCTCGGCTCACTGCAGCCTCCACCT...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGGTAAGCGGTTCTGTTaGTGCACTGCAGACTGTATT +
Preference number: 2 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSGKRFC*CTADCI
Trigger: AATACAGTCTGCAGTGCAGCAACAGAACCGCTTACC...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACCGAGATTGCACCATTaGACTCCAGCCTGGGCGACA +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSPRLHH*TPAWAT
Trigger: TGTCGCCCAGGCTGGAGTGCAATGGTGCAATCTCGG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 90 bp ACCTCCCCTCCCACATCAAGAAACAACGCCAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTGAGGCCTCAGGAAGGTAACAAATAC +
Preference number: 2 (lower is better)
Translates to: TSPPTSRNNAKGLKT*CSRLILRPQEGNKY
Trigger: GTATTTGTTACCTTCCTGAGGCCTCAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTTGGCGTTGTTTCTTGATGTGGGAGGGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAGTGATTTCTTTAGCTTaGTGGAGAACATGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKVISLA*WRTWCP
Trigger: GGGACACCATGTTCTCCATCAAGCTAAAGAAATCAC...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATATGGGACACCGTTCTaGCGGCTGACCACAGGTTTA +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQYGTPF*RLTTGL
Trigger: TAAACCTGTGGTCAGCCGTCAGAACGGTGTCCCATA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAATTACAAGGAGAAGAATaGAGGTTCAGTACTGCCCTC +
Preference number: 2 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKLQGEE*RFSTAL
Trigger: GAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAA...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR GCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAACACAGGAAGGTGACGTaGCACTCTCCTTGGGTAATC +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQHRKVT*HSPWVI
Trigger: GATTACCCAAGGAGAGTGGCACGTCACCTTCCTGTG...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATTTCTCCTCAGGAACTaGTCACCTGTGGGGAGAGTG +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQFLLRN*SPVGRV
Trigger: CACTCTCCCCACAGGTGAGCAGTTCCTGAGGAGAAA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACCAGGAGATGGAGGTTaGAGTGAGCCGAGATTGCAC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSPGDGG*SEPRLH
Trigger: GTGCAATCTCGGCTCACTGCAACCTCCATCTCCTGG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCATATTTTTGAAAAAGTaGAGTTCTGGCCGGGCGCAG +
Preference number: 2 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPIFLKK*SSGRAQ
Trigger: CTGCGCCCGGCCAGAACTCCACTTTTTCAAAAATAT...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCACACCTGTGGGGAGAGTaGCTTGTGGTCTGCTTACCC +
Preference number: 2 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPHLWGE*LVVCLP
Trigger: GGGTAAGCAGACCACAAGTCACTCTCCCCACAGGTG...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACTGACAGTATGCACCTaGCAGTATGGGACACCGTTC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSLTVCT*QYGTPF
Trigger: GAACGGTGTCCCATACTGTCAGGTGCATACTGTCAG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGTACCATGAACTGTCCTaGACACACCAGCTGGGGAAA +
Preference number: 2 (lower is better)
Translates to: ISPSARPACNSSISTKLQYHELS*THQLGK
Trigger: TTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTA...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 2 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATGGCTCAGGCCCCTCTaGGTATTTCTCCTCAGGAAC +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATEWLRPL*VFLLRN
Trigger: GTTCCTGAGGAGAAATACCCAGAGGGGCCTGAGCCA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCCACACCCTGTTCTCATaGTCCTCCCACTCACTGCCC +
Preference number: 2 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPHTLFS*SSHSLP
Trigger: GGGCAGTGAGTGGGAGGAGCATGAGAACAGGGTGTG...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTACACCGAGATCGAGGTaGTGCACATCACGTCTTTTA +
Preference number: 2 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGITPRSR*CTSRLL
Trigger: TAAAAGACGTGATGTGCACCACCTCGATCTCGGTGT...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACACACCGAGATCGAGGTaGTGCACATCACGTCTTTTA +
Preference number: 2 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNTPRSR*CTSRLL
Trigger: TAAAAGACGTGATGTGCACCACCTCGATCTCGGTGT...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATTCAATACTCAAGGCTaGGTGGACTCTACAGGGCAA +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQFNTQG*VDSTGQ
Trigger: TTGCCCTGTAGAGTCCACCCAGCCTTGAGTATTGAA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAAATGCACCTGACAGTATaGGACACCGTTCTGACGGCT +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATEMHLTV*DTVLTA
Trigger: AGCCGTCAGAACGGTGTCCCATACTGTCAGGTGCAT...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAA +
Preference number: 2 (lower is better)
Translates to: FVFPQIKGIRRFRPY*DTLFQPLGIPDVSK
Trigger: TTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAAGAGTGACACTAACCTaGTTAAGGAAGTGTGTGGTT +
Preference number: 2 (lower is better)
Translates to: ISGLPNRSIGLELRRETGRVTLT*LRKCVV
Trigger: AACCACACACTTCCTTAACCAGGTTAGTGTCACTCT...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCTGTTCAAATTTGGTTTaGCCTTTGTTAGCACTGCTT +
Preference number: 2 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPCSNLV*PLLALL
Trigger: AAGCAGTGCTAACAAAGGCCAAACCAAATTTGAACA...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAATTGAGAGATCAAATCTaGAATCCAGACCCACAGGAA +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQLRDQI*NPDPQE
Trigger: TTCCTGTGGGTCTGGATTTCAGATTTGATCTCTCAA...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 90 bp ACAACATGCTTAACAGCTCAATTGAAGAACCTAGAAGAGATGCCATaGAGGCCACTTTCCTACAGTAATTCTAAGATTTACGCAGCCTCT +
Preference number: 2 (lower is better)
Translates to: TTCLTAQLKNLEEMP*RPLSYSNSKIYAAS
Trigger: AGAGGCTGCGTAAATCTTAGAATTACTGTAGGAAAGTGGCCTCAATGGCATCTCTTCTAGGTTCTTCAATTGAGCTGTTAAGCATGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATCGTTCAATTGGACTTaGACTCAGAAGGGAAACTGG +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATESFNWT*TQKGNW
Trigger: CCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATATCCAGGTAGAATCTaGCAGTATGCACCTGACAGT +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATEYPGRI*QYAPDS
Trigger: ACTGTCAGGTGCATACTGTCAGATTCTACCTGGATA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAGAGAGAAAGAGGAAGTaGTATGTCCAAAGTTTCAGA +
Preference number: 2 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQERKRK*YVQSFR
Trigger: TCTGAAACTTTGGACATATCACTTCCTCTTTCTCTC...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAACTAGGGTCATTTCGCTaGAACAACATGCTTAACAGC +
Preference number: 2 (lower is better)
Translates to: SNLVWPLLALLEQFCATELGSFR*NNMLNS
Trigger: GCTGTTAAGCATGTTGTTGCAGCGAAATGACCCTAG...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCAAGCCTTCTCTCACTaGTTTCACAAATGTTTGTCA +
Preference number: 2 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNQAFSH*FHKCLS
Trigger: TGACAAACATTTGTGAAACCAGTGAGAGAAGGCTTG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAATAAACACCCAAAAGTaGGATTACTGGGTCATACGC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSINTQK*DYWVIR
Trigger: GCGTATGACCCAGTAATCCCACTTTTGGGTGTTTAT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR GCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCATTCGCTGCAACAACATaGTTAACAGCTCAATTGAAG +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSFAATT*LTAQLK
Trigger: CTTCAATTGAGCTGTTAAGCATGTTGTTGCAGCGAA...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CAA 90 bp CTTCTGTATTCACTCAGTGAGGGAAATCTGGGTTATTTCCAGTTTTaGAAGATTATGAATAACATTACTATGAGCACGTCCGTGCACAGA +
Preference number: 2 (lower is better)
Translates to: LLYSLSEGNLGYFQF*KIMNNITMSTSVHR
Trigger: TCTGTGCACGGACGTGCTCATAGTAATGTTATTCATAATCTTCAAAAACTGGAAATAACCCAGATTTCCCTCACTGAGTGAATACAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAGGGAAAACCCTTGTTTaGGTAAGAGGACTTACTATG +
Preference number: 2 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPGKTLV*VRGLTM
Trigger: CATAGTAAGTCCTCTTACTCAAACAAGGGTTTTCCC...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACTGGATGTTACTTATTaGACTCCAGGTACACATTAT +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSLDVTY*TPGTHY
Trigger: ATAATGTGTACCTGGAGTTCAATAAGTAACATCCAG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCATCAAGTAGATGTCATTaGCTACTAGAATTATGTGGG +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSSSRCH*LLELCG
Trigger: CCCACATAATTCTAGTAGCCAATGACATCTACTTGA...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAATAGTATGGAACCTTTaGAAACTGACTTCATTTTCC +
Preference number: 2 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSIVWNL*KLTSFS
Trigger: GGAAAATGAAGTCAGTTTCCAAAGGTTCCATACTAT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CCA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAGCTACTAGAATTATGTaGGAAAACCCTTGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPATRIM*ENPCLS
Trigger: ACTCAAACAAGGGTTTTCCCACATAATTCTAGTAGC...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR TCA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCGTCACTTTCTACACTTaGGAGATCAAATCTGAAATC +
Preference number: 2 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPVTFYT*EIKSEI
Trigger: GATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGAC...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp TCCCAACCACCCTCCTGCGGATCCCCACGCCTCCCCTaGGCATCCCATGCGGGCAGCAGCACACAGGAGACC +
Preference number: 3 (lower is better)
Translates to: SQPPSCGSPRLP*ASHAGSSTQET
Trigger: GGTCTCCTGTGTGCTGCTGCCCGCATGGGATGCGCAGGGGAGGCGTGGGGATCCGCAGGAGGGTGGTTGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp TCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTaGCCCCTGGCAGTGGTGTGCCCTCACCCAGCAAGG +
Preference number: 3 (lower is better)
Translates to: SEHSFCLAWVRG*PLAVVCPHPAR
Trigger: CCTTGCTGGGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CAGTGGTGTGCCCTCACCCAGCAAGGGCCAGACAGCTaGTGTCTGGGAGAGGCACGACGGGGGCTCAGGAAC +
Preference number: 3 (lower is better)
Translates to: QWCALTQQGPDS*CLGEARRGLRN
Trigger: GTTCCTGAGCCCCCGTCGTGCCTCTCCCAGACAGCAGCTGTCTGGCCCTTGCTGGGTGAGGGCACACCACTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp TGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGA +
Preference number: 3 (lower is better)
Translates to: WGRPGGLDAEEQ*ASSVRDLCTRG
Trigger: TCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTaGGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTG +
Preference number: 3 (lower is better)
Translates to: VQDLGPPRRTGR*GAVGVQCKRLV
Trigger: CACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp GCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAGAGGTGGGCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: AEEQWASSVRDL*TRGQQERWAGQ
Trigger: CTGGCCAGCCCACCTCTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CCACAGGCAGACTCACCAGGCACGCCCCATGGCCTGTaGTCATGCCCTCAGGTGGTGACGAAAGGTAGGGGA +
Preference number: 3 (lower is better)
Translates to: PQADSPGTPHGL*SCPQVVTKGRG
Trigger: TCCCCTACCTTTCGTCACCACCTGAGGGCATGAGCACAGGCCATGGGGCGTGCCTGGTGAGTCTGCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGACTGGGCCTTCTTCTG +
Preference number: 3 (lower is better)
Translates to: LRVRPGTALVLS*PDAWCRLGLLL
Trigger: CAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GGGAAACCAGTCTCTGAGGAGTACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGTCCGTCCAGGCACTGC +
Preference number: 3 (lower is better)
Translates to: GKPVSEEYWVNC*YAGAPGPSRHC
Trigger: GCAGTGCCTGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CCTCCTGCAAATCCCAGGAGGGGAACTCGGAGCCAGTaGCCAGAACAGACAGCCAAGCCCCGGGTAGATCTC +
Preference number: 3 (lower is better)
Translates to: PPANPRRGTRSQ*PEQTAKPRVDL
Trigger: GAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTTCCCCTCCTGGGATTTGCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp CAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCG +
Preference number: 3 (lower is better)
Translates to: QPNLRVLGSHKS*PKQSLGLLPHP
Trigger: CGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GCTTCCTGCAGAAGCCCCTCCGGACTGCAGCACAGGTaGTCCCACCTGGTTGTAGGGCAGGTCACTCACTTC +
Preference number: 3 (lower is better)
Translates to: ASCRSPSGLQHR*SHLVVGQVTHF
Trigger: GAAGTGAGTGACCTGCCCTACAACCAGGTGGGACCACCTGTGCTGCAGTCCGGAGGGGCTTCTGCAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GCATCCATAGGTGGCTGCGCACCTAGACGGTCCTGCTaGAGGAAGGCAAGGCACACAGATCTCCAGCAGCCG +
Preference number: 3 (lower is better)
Translates to: ASIGGCAPRRSC*RKARHTDLQQP
Trigger: CGGCTGCTGGAGATCTGTGTGCCTTGCCTTCCTTCAGCAGGACCGTCTAGGTGCGCAGCCACCTATGGATGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GGCTCAGGAACACAGCCAGGAGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAAAAGGTGTCACGCTGC +
Preference number: 3 (lower is better)
Translates to: GSGTQPGGRGPF*VVSDNQKVSRC
Trigger: GCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTGTTCCTGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp GGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTaGTACACATGGCTTCACCCTTCGCCTGAACCCACT +
Preference number: 3 (lower is better)
Translates to: GPAPLQICTGRN*YTWLHPSPEPT
Trigger: AGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp ACAACCACGCCTTCCGGGCCAGCTCCTCTCCAGATCTaGACTGGCAGGAACTGCTACACATGGCTTCACCCT +
Preference number: 3 (lower is better)
Translates to: TTTPSGPAPLQI*TGRNCYTWLHP
Trigger: AGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCGGAAGGCGTGGTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp CAGGAACACAGCCAGGAGGCCGTGGCCCCTTCTGAGTaGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGG +
Preference number: 3 (lower is better)
Translates to: QEHSQEAVAPSE*SVTIKRCHAAG
Trigger: CCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp GGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGGCTCCGGGTCCGTCCA +
Preference number: 3 (lower is better)
Translates to: GLEGNQSLRSTG*TADMRGLRVRP
Trigger: TGGACGGACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCTCTAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATATGCAGACAGGTCCCCA +
Preference number: 3 (lower is better)
Translates to: VDQTPGADWAFF*HSPCVYADRSP
Trigger: TGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQCPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp ACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAG +
Preference number: 3 (lower is better)
Translates to: TLNIICCLLSRT*GRPGGLDAEEQ
Trigger: CTGCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp CCAAAACGCAGAGGGTGCACATCGTTCTGCAGTGTCTaGGGTCACCTCACAGCCACCCTCTTTGTGACCACT +
Preference number: 3 (lower is better)
Translates to: PKRRGCTSFCSV*GHLTATLFVTT
Trigger: AGTGGTCACAAAGAGGGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGATGTGCACCCTCTGCGTTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGC +
Preference number: 3 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLIICCL*SRTWGR
Trigger: GCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: KTRVVCARDGFRGKPVSECPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGAAAAATCAGCAGGTTTaGGCCTTTGGTCTGTTTCTG +
Preference number: 3 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWKNQQV*AFGLFL
Trigger: CAGAAACAGACCAAAGGCCAAAACCTGCTGATTTTT...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp TGGCAGGAACTGCTACACATGGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGA +
Preference number: 3 (lower is better)
Translates to: WQELLHMASPFA*THFSASCPSFR
Trigger: TCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CAAGGACATCCAAAACGCAGAGGGTGCACATCGTTCTaGAGTGTCTGGGGTCACCTCACAGCCACCCTCTTT +
Preference number: 3 (lower is better)
Translates to: QGHPKRRGCTSF*SVWGHLTATLF
Trigger: AAAGAGGGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGATGTGCACCCTCTGCGTTTTGGATGTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp GAAGGAAGGCAAGGCACACAGATCTCCAGCAGCCGCTaGCCCAATTCCATCCACAGGGTTATTTCTAGGCTC +
Preference number: 3 (lower is better)
Translates to: EGRQGTQISSSR*PNSIHRVISRL
Trigger: GAGCCTAGAAATAACCCTGTGGATGGAATTGGGGCAGCGGCTGCTGGAGATCTGTGTGCCTTGCCTTCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGC +
Preference number: 3 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSIICCL*SRTWGR
Trigger: GCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTG +
Preference number: 3 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWKGLKT*CSRLIL
Trigger: CAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTT...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp ACTTTCAGTGTAATCCTGAGTAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACAAATCATGGCCGAAGC +
Preference number: 3 (lower is better)
Translates to: TFSVILSRASPT*ESWAVTNHGRS
Trigger: GCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCTACTCAGGATTACACTGAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CCTACATTTACAAGGAGAAGAATGCAGGTTCAGTACTaGCCTCCTGCAAATCCCAGGAGGGGAACTCGGAGC +
Preference number: 3 (lower is better)
Translates to: PTFTRRRMQVQY*PPANPRRGTRS
Trigger: GCTCCGAGTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAAATGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp ATCCAGACCCACAGGAAGGTGACGTGCCACTCTCCTTaGGTAATCCCTAGGGTCATTTCGCTGCAACAACAT +
Preference number: 3 (lower is better)
Translates to: IQTHRKVTCHSP*VIPRVISLQQH
Trigger: ATGTTGTTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCTGTGGGTCTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCATCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSSSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLRFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAG +
Preference number: 3 (lower is better)
Translates to: TMGCFVALVPETPRSRWCCPCAK*TRRLVQ
Trigger: CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATCCAGTGTAAGAGACTaGTGCACGCGGGGACAGCAG +
Preference number: 3 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTSSVRD*CTRGQQ
Trigger: CTGCTGTCCCCGCGTGCACAAGTCTCTTACACTGGA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAATQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp AGAGTGAACAGTGCTGGCTGCCACTTCACTCGGTATTaGCTGGATAGTTTAGACTGTTGGGCTAGACCTGGC +
Preference number: 3 (lower is better)
Translates to: RVNSAGCHFTRY*LDSLDCWARPG
Trigger: GCCAGGTCTAGCCCAACAGTCTAAACTATCCAGTCAATACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CATCTGGGCCTTCAAGGCACTTCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACTTCACTCGGTATTGAC +
Preference number: 3 (lower is better)
Translates to: HLGLQGTSKDTE*TVLAATSLGID
Trigger: GTCAATACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGAAGTGCCTTGAAGGCCCAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: KTRVVCARDGFRGKPVSERFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCAGGTTCAGACCTTACTaGGATACACTCTTTCAGCCT +
Preference number: 3 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSRFRPY*DTLFQP
Trigger: AGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCT...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CGACGTGCTCTAACTTCAGCATCCACGGTGTTTTTGTaGAGAGCACGTACGCAAGTAAATCCCATCAGCACC +
Preference number: 3 (lower is better)
Translates to: RRALTSASTVFL*RARTQVNPIST
Trigger: GGTGCTGATGGGATTTACTTGCGTACGTGCTCTTCACAAAAACACCGTGGATGCTGAAGTTAGAGCACGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CAGGTTTTACCTGGGCAGGACTATCCAGGTAGAATCTaGCAGTATGCACCTGACAGTATGGGACACCGTTCT +
Preference number: 3 (lower is better)
Translates to: QVLPGQDYPGRI*QYAPDSMGHRS
Trigger: AGAACGGTGTCCCATACTGTCAGGTGCATACTGTCAGATTCTACCTGGATAGTCCTGCCCAGGTAAAACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp ATCAAATCTGAAATCCAGACCCACAGGAAGGTGACGTaGCACTCTCCTTGGGTAATCCCTAGGGTCATTTCG +
Preference number: 3 (lower is better)
Translates to: IKSEIQTHRKVT*HSPWVIPRVIS
Trigger: CGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCTGTGGGTCTGGATTTCAGATTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CCA 72 bp ATCCAGGTAGAATCTGACAGTATGCACCTGACAGTATaGGACACCGTTCTGACGGCTGACCACAGGTTTAAC +
Preference number: 3 (lower is better)
Translates to: IQVESDSMHLTV*DTVLTADHRFN
Trigger: GTTAAACCTGTGGTCAGCCGTCAGAACGGTGTCCCATACTGTCAGGTGCATACTGTCAGATTCTACCTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp GACCCTCTAACATTGATGTCAAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCACGGTGTTTTTGTGAAG +
Preference number: 3 (lower is better)
Translates to: DPLTLMSSSVAT*SNFSIHGVFVK
Trigger: CTTCACAAAAACACCGTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCTTGACATCAATGTTAGAGGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR GCA 72 bp CTACTAAGGCAGGGTCTATCTAGTTCAACCCTTGCATaGACTAACACCTCCCCTCCCACATCAAGAAACAAC +
Preference number: 3 (lower is better)
Translates to: LLRQGLSSSTLA*TNTSPPTSRNN
Trigger: GTTGTTTCTTGATGTGGGAGGGGAGGTGTTAGTGCATGCAAGGGTTGAACTAGATAGACCCTGCCTTAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GGCAACATTACCATGAACTGTCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAACAAAGATGAAAACACG +
Preference number: 3 (lower is better)
Translates to: GNITMNCPAHTS*GKPQVNKDENT
Trigger: CGTGTTTTCATCTTTGTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTAATGTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp CCACCAAAACAACCAAAGCAGATGAAACATCACAGCTaGGCGGGGAGTAAGAGACCCTCTAACATTGATGTC +
Preference number: 3 (lower is better)
Translates to: PPKQPKQMKHHS*AGSKRPSNIDV
Trigger: GACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATGTTTCATCTGCTTTGGTTGTTTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAGCTGAGGCGGGTGGATaGCCTGAGCTCAGGAGTTCA +
Preference number: 3 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPAEAGG*PELRSS
Trigger: TGAACTCCTGAGCTCAGGCAATCCACCCGCCTCAGC...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp CTTAAGCACAGTTTCAGGCACGTGATTTCTTTAGCTTaGTGGAGAACATGGTGTCCCGGCGTGGAAACAGTA +
Preference number: 3 (lower is better)
Translates to: LKHSFRHVISLA*WRTWCPGVETV
Trigger: TACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAAGAAATCACGTGCCTGAAACTGTGCTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp AGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTaGAATCCAGACCCACAGGAAGGTGACGTGCCACTC +
Preference number: 3 (lower is better)
Translates to: RACHFLHLRDQI*NPDPQEGDVPL
Trigger: GAGTGGCACGTCACCTTCCTGTGGGTCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp CTACAGGGCAATGGTGTGACTGACCAGCTCTTTCATTaGAGACATAGAAAGTACAAGCAGACCCTTCTGGCA +
Preference number: 3 (lower is better)
Translates to: LQGNGVTDQLFH*RHRKYKQTLLA
Trigger: TGCCAGAAGGGTCTGCTTGTACTTTCTATGTCTTCAATGAAAGAGCTGGTCAGTCACACCATTGCCCTGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp GACAAAACAACTCCAACAACCCAAAGAATTCCCTCATaGTACCTCTTTCCAGTCAGACTTCCCCCACTCCCA +
Preference number: 3 (lower is better)
Translates to: DKTTPTTQRIPS*YLFPVRLPPLP
Trigger: TGGGAGTGGGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp GTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTaGACATCACGTCTTTTATACACATCAAGCCTTCTC +
Preference number: 3 (lower is better)
Translates to: VALVPETPRSRW*TSRLLYTSSLL
Trigger: GAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GCTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTaGTTTGAGGGAATTCCGGGCACTACTTTGATTTTA +
Preference number: 3 (lower is better)
Translates to: AALQTVFLDEVG*FEGIPGTTLIL
Trigger: TAAAATCAAAGTAGTGCCCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp GGCCAACAGATAAAGTCAGTAAGAGTGACACTAACCTaGTTAAGGAAGTGTGTGGTTTCTCAGAGCACACCC +
Preference number: 3 (lower is better)
Translates to: GQQIKSVRVTLT*LRKCVVSQSTP
Trigger: GGGTGTGCTCTGAGAAACCACACACTTCCTTAACCAGGTTAGTGTCACTCTTACTGACTTTATCTGTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCGTGTTCAAATTTGGTTaGGCCTTTGTTAGCACTGCT +
Preference number: 3 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPVFKFG*AFVSTA
Trigger: AGCAGTGCTAACAAAGGCCAAACCAAATTTGAACAC...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp ATGAGATACTATGGGTTGTTTTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTGGTGCACATCACGTCT +
Preference number: 3 (lower is better)
Translates to: MRYYGLFCCFSA*NTEIEVVHITS
Trigger: AGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGTATCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGTQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAAAAGGTCTCAAAACTTaGTGCTCACGACTAATACTG +
Preference number: 3 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKKGLKT*CSRLIL
Trigger: CAGTATTAGTCGTGAGCACAAAGTTTTGAGACCTTT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR TCA 72 bp CCAAGGCTCTGGTTAACTAGGAATGCTTTGCTACATTaGAAGGAAAGTTCAAAACCAAGCCCAAACTCCCTG +
Preference number: 3 (lower is better)
Translates to: PRLWLTRNALLH*KESSKPSPNSL
Trigger: CAGGGAGTTTGGGCTTGGTTTTGAACTTTCCTTTCAATGTAGCAAAGCATTCCTAGTTAACCAGAGCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CCA 72 bp TTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTaGTGCACATCACGTCTTTTATACACATCAAGCCTT +
Preference number: 3 (lower is better)
Translates to: FVALVPETPRSR*CTSRLLYTSSL
Trigger: AAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTACTCAATATCATCTGTaGCTTATTGTCCAGGACCTG +
Preference number: 3 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSATQYHL*LIVQDL
Trigger: CAGGTCCTGGACAATAAGCAACAGATGATATTGAGT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
3UTR-3UTR CAA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCACTGGATGTTACTTATaGAACTCCAGGTACACATTA +
Preference number: 3 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPTGCYL*NSRYTL
Trigger: TAATGTGTACCTGGAGTTCAATAAGTAACATCCAGT...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp TCAAATTTGGTTTGGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCAACAGAATGTGGGGAGAGTGACTaGTGGTCTGCTTACCCAAAA +
Preference number: 3 (lower is better)
Translates to: SNLVWPLLALLEQFCATECGESD*WSAYPK
Trigger: TTTTGGGTAAGCAGACCACAAGTCACTCTCCCCACA...TTCTGTTGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp TACTCTCCTCATGAAGAGCATGTCACTTTCTACACTTaGGAGATCAAATCTGAAATCCAGACCCACAGGAAG +
Preference number: 3 (lower is better)
Translates to: YSPHEEHVTFYT*EIKSEIQTHRK
Trigger: CTTCCTGTGGGTCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAGGAGAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAGCACATGTCAACAGTTaGCTTCTTTTTATTGCTGAG +
Preference number: 3 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQAHVNS*LLFIAE
Trigger: CTCAGCAATAAAAAGAAGCAAACTGTTGACATGTGC...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAACATAGTATGGAACCTTaGGAAACTGACTTCATTTTC +
Preference number: 3 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQHSMEP*ETDFIF
Trigger: GAAAATGAAGTCAGTTTCCAAAGGTTCCATACTATG...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp GAACCTTTGGAAACTGACTTCATTTTCCCGCATAATGCATTTAAAACACATCCAAATTTGGTTTGGCCTTaGTTAGCACTGCTTGAGCAA +
Preference number: 3 (lower is better)
Translates to: EPLETDFIFPHNAFKTHPNLVWP*LALLEQ
Trigger: TTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATT...TGGATGTGTTTTAAATGCATTATGCGGGAAAATGAAGTCAGTTTCCAAAGGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp TTCTATCTCAGGACTCCCAAATCGTTCAATTGGACTTaGACTCAGAAGGGAAACTGGATGTTACTTATTGAA +
Preference number: 3 (lower is better)
Translates to: FYLRTPKSFNWT*TQKGNWMLLIE
Trigger: TTCAATAAGTAACATCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGATAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR-3UTR CAA 90 bp TCCAATCTAGATTTCATCAGTAATAAACATTTTGGTTTCTATCTCAGGACTCCCATCGTTCAATTGGACTaGAACTCAGAAGGGAAACTG +
Preference number: 3 (lower is better)
Translates to: SNLDFISNKHFGFYLRTPIVQLD*NSEGKL
Trigger: CAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGAT...GGGAGTCCTGAGATAGAAACCAAAATGTTTATTACTGATGAAATCTAGATTGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp ATTAAACACCAAAAAGTAACTCTGCTACTCTCCTCATaGAGAGCATGTCACTTTCTACACTTGAGAGATCAA +
Preference number: 3 (lower is better)
Translates to: IKHQKVTLLLSS*RACHFLHLRDQ
Trigger: TTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAGGAGAGTAGCAGAGTTACTTTTTGGTGTTTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR CCA 72 bp ATATGTATTTCCTTCCTCAAGTGTTCAAATTTGGTTTaGCCTTTGTTAGCACTGCTTGAGCAATTTTGTGCA +
Preference number: 3 (lower is better)
Translates to: ICISFLKCSNLV*PLLALLEQFCA
Trigger: TGCACAAAATTGCTCAAGCAGTGCTAACAAAGGCCAAACCAAATTTGAACACTTGAGGAAGGAAATACATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR TCA 72 bp AGTGGTTATACATTTTGCATTCCTACAAGCAACATATaGTATGTTCTTCATCTTTGCCAGCACTTGGTATTC +
Preference number: 3 (lower is better)
Translates to: SGYTFCIPTSNI*YVLHLCQHLVF
Trigger: GAATACCAAGTGCTGGCAAAGATGAAGAACATATCATATGTTGCTTGTAGGAATGCAAAATGTATAACCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
3UTR GCA 72 bp ATTAAGGCCCATCACCAGGTTTATATAAGGCATGAGTaGCTTTTCAGAATGTCAAATATTCTGATCTCTAAA +
Preference number: 3 (lower is better)
Translates to: IKAHHQVYIRHE*LFRMSNILISK
Trigger: TTTAGAGATCAGAATATTTGACATTCTGAAAAGGCACTCATGCCTTATATAAACCTGGTGATGGGCCTTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCACCTCCTCCTCGCGCTaGGCCAGGAGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSTSSSR*ARRASR
Trigger: GCGGGAGGCCCTCCTGGCCCAGCGCGAGGAGGAGGT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTCCCCACGCCTCCCCTaGGCATCCCATGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSSPRLP*ASHAGS
Trigger: GCTGCCCGCATGGGATGCGCAGGGGAGGCGTGGGGA...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCCAGGCCCCCAGCTGTaGCTCCGGAAGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRPGPQL*LRKGER
Trigger: TCTTTCTCCCTTCCGGAGGCACAGCTGGGGGCCTGG...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCTGGGCCTGCTGCTTCTaGAGGTTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRWACCF*RLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAGGCCCA...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGTCTGGCATTTCTGCTaGTGGCTCAGGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRVWHFC*WLRPLD
Trigger: GTCCAGGGGCCTGAGCCAGCAGCAGAAATGCCAGAC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCCCCCTGCGCATCCCATaGGGGCAGCAGCACACAGGA +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSPLRIP*GQQHTG
Trigger: TCCTGTGTGCTGCTGCCCGCATGGGATGCGCAGGGG...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCAGCTCCGCGGCCACCTaGCTTCTGCAACAGGAACCA +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRSSAAT*LLQQEP
Trigger: TGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCT...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGCAAGGCTCCCCGTaGCTTCCTCAGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRLQGSP*LPQEYC
Trigger: GCAGTACTCCTGAGGAAGCCACGGGGAGCCTTGCAG...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGCTCCTTTCCCTGCCTaGAGGCGGGGCTCGCATGAC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRAPFPA*RRGSHD
Trigger: GTCATGCGAGCCCCGCCTTCAGGCAGGGAAAGGAGC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCCTGGGTGCGAGGCTaGCCCCTGGCAGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAAWVRG*PLAVVC
Trigger: GCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGCTGGGAGAGGGGTGCTaGACTCAGCCATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWLGEGC*TQPCPG
Trigger: TCCGGGACATGGCTGAGTGCAGCACCCCTCTCCCAG...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGCCTCTGGGAGAGGGGTaGTGCACTCAGCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWPLGEG*CTQPCP
Trigger: GGGACATGGCTGAGTGCAGCACCCCTCTCCCAGAGG...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCCACCCTGCAGAGCGCTaGGGAGCTCGTAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGHPAER*GARRDE
Trigger: TTCATCTCTACGAGCTCCTCAGCGCTCTGCAGGGTG...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGGGGACAAGCTGCGAGTaGGCGCCCTCTCGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEGTSCE*APSRSA
Trigger: TGCTGAGCGAGAGGGCGCTCACTCGCAGCTTGTCCC...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCCTGTCTGCCGCTGGCTaGGCCGCTCTGCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFLSAAG*AALPPG
Trigger: GCCGGGAGGCAGAGCGGCTCAGCCAGCGGCAGACAG...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRRASPT*ESWAVT
Trigger: TGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSYWVNC*YAGAPG
Trigger: ACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTA...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTaGCCCCTGGCAGTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLAWVRG*PLAVVC
Trigger: GCACACCACTGCCAGGGGTCAGCCTCGCACCCAGGC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGGCTTACTTGTGACGTaGACGTCAGAGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRGLLVT*TSEAPA
Trigger: AGCTGGAGCCTCTGACGTGCACGTCACAAGTAAGCC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCCAGGCCCCCAGCTGTaGCTCCGGAAGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRPGPQL*LRKGER
Trigger: TCTTTCTCCCTTCCGGAGGCACAGCTGGGGGCCTGG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCAGTCGGCCCAAGTGTaGCTCCCAGATTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRQSAQV*LPDFHS
Trigger: TGAGTGGAAATCTGGGAGGCACACTTGGGCCGACTG...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCCTGCGCTGCTTCTCCTaGTCAATGAGGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSLRCFS*SMRELG
Trigger: CCCGAGCTCCCTCATTGAGCAGGAGAAGCAGCGCAG...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGCATCCATAGGTGGCTaGGCACCTAGACGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSASIGG*APRRSC
Trigger: GCAGGACCGTCTAGGTGCGCAGCCACCTATGGATGC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGTCGCTGAGGGTCCGTaGGCTCCGGTGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLVAEGP*APVHRE
Trigger: TTCCCTGTGCACCGGAGCCCACGGACCCTCAGCGAC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCGTGGATCTTGTGAGCTaGGTTGCCTTGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRVDLVS*VALLWC
Trigger: GCACCACAGCAAGGCAACCCAGCTCACAAGATCCAC...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGGCCAGACTTGCTCCTaGTGGCACCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLGQTCS*WHQALG
Trigger: GCCCAGAGCCTGGTGCCACCAGGAGCAAGTCTGGCC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGACCAGGCACGCCCCATaGCCTGTGCTCATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQTRHAP*PVLMPS
Trigger: TGAGGGCATGAGCACAGGCCATGGGGCGTGCCTGGT...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGCCTGGTTGTGGATACTaGGAGCTCCGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEPGCGY*ELRGHL
Trigger: CAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGG...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGAAGAAGAAAGTCGCTaGGGGTCCGTGGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLREEESR*GSVGSG
Trigger: ACCGGAGCCCACGGACCCTCAGCGACTTTCTTCTTC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCATCGGGTGGATCTTGTaGGCTGGGTTGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGIGWIL*AGLPCC
Trigger: ACAGCAAGGCAACCCAGCTCACAAGATCCACCCGAT...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQASPFA*THFSAS
Trigger: GCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGGGGACTTTCAGTCTGTaGAACAGGGCTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQGTFSL*NRAPWA
Trigger: TGCCCAGGGAGCCCTGTTGCACAGACTGAAAGTCCC...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGAGCGGAGCTGTTGTaGTCTGCCCCCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRRAELL*SAPKAS
Trigger: GGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACCAGGCCCCCAGCTGTaGCTCCGGAAGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTPGPQL*LRKGER
Trigger: TCTTTCTCCCTTCCGGAGGCACAGCTGGGGGCCTGG...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTCCGCGGCCACCTaGCTTCTGCAACAGGAACCA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSSAAT*LLQQEP
Trigger: TGGTTCCTGTTGCAGAAGCCAGGTGGCCGCGGAGCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGCCCCTTCCTGGTTGTaGATACTGAGAGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQAPSWL*ILRAPR
Trigger: CCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGCCTCCAGAGGAATACTaGGCTGTGCCTGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWPPEEY*AVPGSM
Trigger: CATGGAGCCAGGCACAGCCCAGTATTCCTCTGGAGG...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGTGGGGAGCAATCCTCTaGGAGAGGGGTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRWGAIL*ERGAAL
Trigger: GAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCA...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGCTCTGCCCTTCTaGTCCTTTGTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRLALPF*SFVCLA
Trigger: AGCCAGACAAACAAAGGACCAGAAGGGCAGAGCCAG...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQLLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACTGCAGCACAGGTaGTCCCACCTGGTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRGLQHR*SHLVVG
Trigger: CCCTACAACCAGGTGGGACCACCTGTGCTGCAGTCC...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp GCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTaGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: APGPSRHCPCAK*TRRLVQTGPSS
Trigger: AGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCCCAGATGGGGGTCCTaGCTGGTCAAGAAAACGGGT +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRPRWGS*LVKKTG
Trigger: ACCCGTTTTCTTGACCAGTCAGGACCCCCATCTGGG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGATGTGTCATGTGCCTaGAGGCTCCCTTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRDVSCA*RLPLGC
Trigger: GCAGCCCAAAGGGAGCCTTCAGGCACATGACACATC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGGTACAGCTGTGGTCTaGTCCCTCCAGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWGTAVV*SLQLPF
Trigger: AAAGGGAAGCTGGAGGGAGCAGACCACAGCTGTACC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCCTGGGCAGAGACCATaGAAGGTAGAGAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQPGQRP*KVEREC
Trigger: GCACTCCCTCTCTACCTTGCATGGTCTCTGCCCAGG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGCTTCCTCAGGAGTACTaGCCATTGGTAGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQLPQEY*PLVGSP
Trigger: GGGAGAGCCTACCAATGGGCAGTACTCCTGAGGAAG...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGGAAGCCAGAAGAGATaGTGCATCAGGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSGSQKR*CIRAWL
Trigger: GAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGCCTCCCGGCGCAGCTaGTCCTGTTCCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNASRRS*SCSLSS
Trigger: GCTTGAGAGGGAACAGGAGCAGCTGCGCCGGGAGGC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGTCTGCCTGGCCTGGGTaGGAGGCTGACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQSAWPG*EADPWQ
Trigger: CTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGA...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGGAACTCGGAGCCAGTaGCCAGAACAGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRGTRSQ*PEQTAK
Trigger: CTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTTCC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGAAGCCCCTCCGGACTaGAGCACAGGTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNEAPPD*STGGPT
Trigger: GGTGGGACCACCTGTGCTGCAGTCCGGAGGGGCTTC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGGGGTGAGTGCTTCCTaGAGAAGCCCCTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEGVSAS*RSPSGL
Trigger: CAGTCCGGAGGGGCTTCTGCAGGAAGCACTCACCCC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCTGGCCATCTGTCTCTaGGGCACTGGAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQLAICL*GTGRIL
Trigger: CAGGATCCTTCCAGTGCCCCAGAGACAGATGGCCAG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAGCTTCTGGGATTGCTaGAGGGGCGGGACCCTCATG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSFWDC*RGGTLM
Trigger: CATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCTGTGGGGAGCTCCTTaGCAACAGGCTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRLWGAP*QQAAVG
Trigger: TCCTACTGCAGCCTGTTGCCAAGGAGCTCCCCACAG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGACCCAACTCAGGGCTaGACAGTGACATGTGACAGG +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSDPTQG*TVTCDR
Trigger: CCTGTCACATGTCACTGTCCAGCCCTGAGTTGGGTC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCTTGTGGAAGGTACTGTaGAAGGGCCGTGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRLWKVL*KGRELS
Trigger: GGACAATTCACGGCCCTTCCACAGTACCTTCCACAA...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTGGGGAGCAATCCTCTaGGAGAGGGGTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLWGAIL*ERGAAL
Trigger: GAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCA...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTGCGAGGCTGACCCCTaGCAGTGGTGTGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLCEADP*QWCALT
Trigger: GGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp GGGCCTCCTTCCCCACCCGACACTCAATATCATCTGTaGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GPPSPPDTQYHL*LIVQDLGPPRR
Trigger: CCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCCCAGATGGGGGTCCTaGCTGGTCAAGAAAACGGGT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPPRWGS*LVKKTG
Trigger: ACCCGTTTTCTTGACCAGTCAGGACCCCCATCTGGG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCCTGGTTGTGGATACTaGGAGCTCCGCGGCCACCTG +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNPGCGY*ELRGHL
Trigger: CAGGTGGCCGCGGAGCTCTCAGTATCCACAACCAGG...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTTCCCCATCCCGTGCTaGAGCTCTGCAGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAFPIPC*SSAAVE
Trigger: CTCCACTGCTGCAGAGCTTCAGCACGGGATGGGGAA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGACCTTGAGTCAGCAGTaGGACTTGTGGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRTLSQQ*DLWGHF
Trigger: GAAGTGGCCCCACAAGTCTCACTGCTGACTCAAGGT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAAAGGCGGGGCTCGCATaGCTTCCCTCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAKAGLA*LPSHQL
Trigger: CAGCTGGTGTGAGGGAAGTCATGCGAGCCCCGCCTT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAGCTCAATGGGGCTGCTaGCAGTCGGCCCAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQAQWGC*QSAQVC
Trigger: GCACACTTGGGCCGACTGTCAGCAGCCCCATTGAGC...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCGGCCACCTGGCTTCTaGAACAGGAACCACGTCAAC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLRPPGF*NRNHVN
Trigger: GTTGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCG...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCACGAAAGGCCTTCCGTaGCCTTTACTCCACAATCAG +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGTKGLP*PLLHNQ
Trigger: CTGATTGTGGAGTAAAGGGCACGGAAGGCCTTTCGT...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCTGGGAGAGGGGTGCTaGACTCAGCCATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNLGEGC*TQPCPG
Trigger: TCCGGGACATGGCTGAGTGCAGCACCCCTCTCCCAG...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACATCCTCCAAAGGTCTCTaGTCTCCGGGGCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTSSKGL*SPGQGN
Trigger: GTTTCCCTGCCCCGGAGAGCAGAGACCTTTGGAGGA...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTGCAGCACCACACCCTaGAGAGCGCTGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCCSTTP*RALRSS
Trigger: CGAGCTCCTCAGCGCTCTGCAGGGTGTGGTGCTGCA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGCCAGGTCCTGGCGCTaGTTCTCCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEARSWR*FSRLRC
Trigger: GCAGCGCAGCCTGGAGAAGCAGCGCCAGGACCTGGC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAACTCACGCTCGCGCCTaGGCTTCTCCTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASTHARA*ASPRGT
Trigger: AGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGT...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCGGTCATACTGGTATGTaGCCTTCTTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGGHTGM*PSSAGA
Trigger: AGCTCCAGCAGAAGAAGGGCACATACCAGTATGACC...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGATGCAGGTTCAGTACTaGCCTCCTGCAAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQMQVQY*PPANPR
Trigger: CCTGGGATTTGCAGGAGGGCAGTACTGAACCTGCAT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGCATGGCCTGTGCTCATaGCCTCAGGTGGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRHGLCS*PQVVTK
Trigger: TTTCGTCACCACCTGAGGGCATGAGCACAGGCCATG...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGTCGCTGAGGGTCCGTaGGCTCCGGTGCACAGGGAA +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPVAEGP*APVHRE
Trigger: TTCCCTGTGCACCGGAGCCCACGGACCCTCAGCGAC...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGATACTGGGCTGTGCCTaGCTCCATGACCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQILGCA*LHDQVS
Trigger: AGAGACTTGGTCATGGAGCCAGGCACAGCCCAGTAT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGAAGGGCTTCATACACTaGCTACAGCTGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQKGFIH*LQLMGP
Trigger: GGGTCCCATCAGCTGTAGCCAGTGTATGAAGCCCTT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGTCCGCCATCATCCCCTaGCTGTACACACCACTCATG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSAIIP*LYTPLM
Trigger: CATGAGTGGTGTGTACAGCCAGGGGATGATGGCGGA...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGCCTGGCTGTCCTCTaGGCACAGCTGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQCLAVL*AQLGHH
Trigger: ATGGTGGCCCAGCTGTGCCCAGAGGACAGCCAGGCA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGTCACTCACTTCGGTaGCAGGGGACACAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAGHSLR*QGTQPV
Trigger: CACTGGCTGTGTCCCCTGCCACCGAAGTGAGTGACC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAAGGCCGGGGAAGGTGTaGGGGGTGAGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPRPGKV*GVSASC
Trigger: GCAGGAAGCACTCACCCCCCACACCTTCCCCGGCCT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGACACATCACTGCCATaGGAAGAATGTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSDTSLP*EECRSS
Trigger: ACTGGACCGACATTCTTCTCATGGCAGTGATGTGTC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIRASPT*ESWAVT
Trigger: TGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNYWVNC*YAGAPG
Trigger: ACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGAGGGAAACCAGTCTCTaGGGAGTACTGGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQRETSL*GVLGEL
Trigger: CAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCT...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGCTTCACCCTTCGCCTaGACCCACTTCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCASPFA*THFSAS
Trigger: GCTGGCTGAGAAGTGGGTTCAGGCGAAGGGTGAAGC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCCTTTGATTAAAGAATaGGGCGGGGTGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLPLIKE*GGVGEG
Trigger: TCCCTCCCCCACCCCGCCTCATTCTTTAATCAAAGG...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCCTTTGATTAAAGAATaGGGCGGGGTGGGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPPLIKE*GGVGEG
Trigger: TCCCTCCCCCACCCCGCCTCATTCTTTAATCAAAGG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCCGCACAGCAAAATaGATCAATGTCTCTCGCGGG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSRTAK*INVSRG
Trigger: CCCGCGAGAGACATTGATGCATTTTGCTGTGCGGCT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGCCCCCAAGGCTTCCTaGCTTGACTCTGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNAPKAS*LDSVAR
Trigger: TCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAAGGTAGAGAGGGAGTaGTCCTTTCCCTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRKVERE*SFPCLK
Trigger: CTTCAGGCAGGGAAAGGAGCACTCCCTCTCTACCTT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGTCTGGCATTTCTGCTaGTGGCTCAGGCCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCVWHFC*WLRPLD
Trigger: GTCCAGGGGCCTGAGCCAGCAGCAGAAATGCCAGAC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCAGTCGGCCCAAGTGTaGCTCCCAGATTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLQSAQV*LPDFHS
Trigger: TGAGTGGAAATCTGGGAGGCACACTTGGGCCGACTG...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGGACCGACCACATCTTaGTCAATGGGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTGPTTS*SMGLLT
Trigger: TGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATGCAGCACCACACCCTaGAGAGCGCTGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPCSTTP*RALRSS
Trigger: CGAGCTCCTCAGCGCTCTGCAGGGTGTGGTGCTGCA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTGCAGCACCACACCCTaGAGAGCGCTGAGGAGCTCG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLCSTTP*RALRSS
Trigger: CGAGCTCCTCAGCGCTCTGCAGGGTGTGGTGCTGCA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTCCTTTTCCAGGTCCTaGTGCCCCTGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLSFSRS*CPCCTS
Trigger: GGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGGGTGCACATCGTTCTaGAGTGTCTGGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASGCTSF*SVWGHL
Trigger: GAGGTGACCCCAGACACTGCAGAACGATGTGCACCC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTACGCCCCATGGCCTGTaGTCATGCCCTCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTTPHGL*SCPQVV
Trigger: CACCACCTGAGGGCATGAGCACAGGCCATGGGGCGT...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCGGGAAGGCCCTCTTTaGAAGCACAGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAREGPL*KHRAAP
Trigger: AGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCTGGCCATCTGTCTCTaGGGCACTGGAAGGATCCTG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDALAICL*GTGRIL
Trigger: CAGGATCCTTCCAGTGCCCCAGAGACAGATGGCCAG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGATCTTGTCCAGGAGGTaGTGTTCTCTGCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQILSRR*CSLLFL
Trigger: CAGGAAGAGCAGAGAACACCACCTCCTGGACAAGAT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGAGAGCTCCATGTCTGTaGGGAGCTCCTTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAERAPCL*GAPWQQ
Trigger: CTGTTGCCAAGGAGCTCCCCACAGACATGGAGCTCT...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTTCCCTCACACCAGCTaGGGCCCCATCATCATGGGC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNFPHTS*GPIIMG
Trigger: GCCCATGATGATGGGGCCCCAGCTGGTGTGAGGGAA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGCTGGCTCAGGCCCCTaGACAGGTAAAATGATCTTC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQAGSGP*TGKMIF
Trigger: GAAGATCATTTTACCTGTCCAGGGGCCTGAGCCAGC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGTTCAGCTTTCACGTCTaGCATTTCTGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQFSFHV*HFCCWL
Trigger: GAGCCAGCAGCAGAAATGCCAGACGTGAAAGCTGAA...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTGCTGCATCAGGGCATaGCTCTATTGTACACCAGTT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGCCIRA*LYCTPV
Trigger: AACTGGTGTACAATAGAGCCATGCCCTGATGCAGCA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTCCTCCACGTCGCCTaGGTCAGCAGGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLLHVA*VSRLTL
Trigger: GAGAGTGAGCCTGCTGACCCAGGCGACGTGGAGGAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCATTCAGAATCTTTCTTaGAGGGGCTATGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRIQNLS*RGYVAG
Trigger: TCCTGCCACATAGCCCCTCCAAGAAAGATTCTGAAT...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTTGGCCAGGTCCTaGCGCTGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLRLARS*RCFSRL
Trigger: CAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAACCT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGGACAGCAGGAGAGGTaGGCTGGCCAGGATCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFGQQER*AGQDQE
Trigger: CTCCTGATCCTGGCCAGCCCACCTCTCCTGCTGTCC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGACAGCCAGGAGGCCGTaGCCCCTTCTGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLTARRP*PLLSGQ
Trigger: CTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCTCCACCAAGTCCTGTaGGACTGGTATTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDALHQVL*DWYSPS
Trigger: GGATGGGGAATACCAGTCTCACAGGACTTGGTGGAG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAAGTACACCTTGTTTTaGGGTACACTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSKYTLF*GTLSAQ
Trigger: CTGGGCAGAGAGTGTACCTCAAAACAAGGTGTACTT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGAAGTACACCTTGTTTTaGGGTACACTCTCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWKYTLF*GTLSAQ
Trigger: CTGGGCAGAGAGTGTACCTCAAAACAAGGTGTACTT...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGCATGTCATCACTGGGTaGGTGAAAGAGGTCAGAATC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQHVITG*VKEVRI
Trigger: GATTCTGACCTCTTTCACTCACCCAGTGATGACATG...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCGTGTCATCGGTGGATaGACTGGATCCGGTGATATC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPRVIGG*TGSGDI
Trigger: GATATCACCGGATCCAGTTCATCCACCGATGACACG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGTGGGCTGCTTCATTTTaGCCTTTGCACAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQWAASF*PLHRRL
Trigger: TAGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCCA...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCTGTCTGCCGCTGGCTaGGCCGCTCTGCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLLSAAG*AALPPG
Trigger: GCCGGGAGGCAGAGCGGCTCAGCCAGCGGCAGACAG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATGTGGATGGGAAACCTaGCACAGGTCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQECGWET*HRSRSV
Trigger: GACAGAACGGGACCTGTGTCAGGTTTCCCATCCACA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAAGGAACAAATCCCCCTaGGGACAACTTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQERNKSP*GQLPRG
Trigger: CCCCCTTGGAAGTTGTCCTCAGGGGGATTTGTTCCT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGCACTGTCAAGGCCATaGGCAAAAGCACAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLALSRP*AKAQAA
Trigger: GGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGCCTAGACGGTCCTGCTaGAGGAAGGCAAGGCACACA +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLPRRSC*RKARHT
Trigger: TGTGTGCCTTGCCTTCCTTCAGCAGGACCGTCTAGG...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCACGTCTGGCATTTCTaGTGCTGGCTCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHVWHF*CWLRPL
Trigger: CAGGGGCCTGAGCCAGCAGCAGAAATGCCAGACGTG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCAGGCTCCCTTTGGGCTaGTTCATTTTGACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSRLPLG*FILTFA
Trigger: TGCAAAGGTCAAAATGAAGCAGCCCAAAGGGAGCCT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGAGAGCGAGACACTCTaGTGGGATCGTCTATTGGCA +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTESETL*WDRLLA
Trigger: TGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCGGGGGCTCCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCAGCTTTTCTACCATCTaGTGCTCAAAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: AGAPGPSRHCPCAKLTRRSFSTI*CSKSRS
Trigger: GGATCTGCTTTTTGAGCAGCAGATGGTAGAAAAGCT...GCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGGAGCCCCCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTGGGAGAGGGGTGCTaGACTCAGCCATGTCCCGGA +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILGEGC*TQPCPG
Trigger: TCCGGGACATGGCTGAGTGCAGCACCCCTCTCCCAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGCTGCTTCTCCAGGCTaGGCTGCTTCTCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAAASPG*AASPAQ
Trigger: TTGAGCAGGAGAAGCAGCGCAGCCTGGAGAAGCAGC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCTCGAGGTACTGGGCCTaGTGCTTCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFSRYWA*CFCRLA
Trigger: GGCCAACCTGCAGAAGCAGCAGGCCCAGTACCTCGA...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTTCCTTTTCCAGGTCCTaGTGCCCCTGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGISFSRS*CPCCTS
Trigger: GGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGA...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGTGTGTGTCCGAGAGATaGTGTTCCTTTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWCVSER*CSFLGT
Trigger: TGTCCCCAAAAAGGAACAGCATCTCTCGGACACACA...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGTTCCCCGTGTGTATATaGAGACAGGTCCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQFPVCI*RQVPMY
Trigger: GTACATGGGGACCTGTCTGCATATACACACGGGGAA...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGTGCACTGGCAGGAACTaGTACACATGGCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAECTGRN*YTWLHP
Trigger: AGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCA...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGACACAGAGTGAACAGTaGTGGCTGCCACTTCACTCG +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLTQSEQ*WLPLHS
Trigger: CGAGTGAAGTGGCAGCCAGCACTGTTCACTCTGTGT...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTCAGTACTGCCCTCCTaGAAATCCCAGGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDASVLPS*KSQEGN
Trigger: GTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAGCTCTGTGGCGACGTaGTCTAACTTCAGCATCCAC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSSVAT*SNFSIH
Trigger: GTGGATGCTGAAGTTAGAGCACGTCGCCACAGAGCT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGGGGTGAGTGCTTCCTaGAGAAGCCCCTCCGGACTG +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSGVSAS*RSPSGL
Trigger: CAGTCCGGAGGGGCTTCTGCAGGAAGCACTCACCCC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGATGGGGGTCCTGACTaGTCAAGAAAACGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRDGGPD*SRKRVK
Trigger: CTTTACCCGTTTTCTTGACCAGTCAGGACCCCCATC...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTGCAACAGGGCTCCCTaGGCAGCACTGAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRCNRAP*AALSAL
Trigger: GAGAGCACTCAGTGCTGCCCAGGGAGCCCTGTTGCA...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGAAGTGCTTTGTCCTTaGCACAGTCAGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWEVLCP*HSQLRL
Trigger: CAATCTCAGCTGACTGTGCCAAGGACAAAGCACTTC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGGCAGAGGTGCGTCCTaGGCAGAGACCATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFGRGAS*AETMQG
Trigger: ACCTTGCATGGTCTCTGCCCAGGACGCACCTCTGCC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGCATCCACTATACGGCTaGCAGCCTCCTCTATCAAGT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRHPLYG*QPPLSS
Trigger: ACTTGATAGAGGAGGCTGCCAGCCGTATAGTGGATG...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTATCGCCTGGGTCATTaGGCCTTGCTTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRYRLGH*ALLHLQ
Trigger: CTGAAGATGAAGCAAGGCCCAATGACCCAGGCGATA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGAAGTTCTCACATTCTaGGCTCTGCTTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQEVLTF*ALLGSQ
Trigger: CTGGCTTCCAAGCAGAGCCCAGAATGTGAGAACTTC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCCAAATGCTCTTCCTCTaGCTTTGGGAAGATGATGCT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGQMLFL*LWEDDA
Trigger: AGCATCATCTTCCCAAAGCCAGAGGAAGAGCATTTG...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGTATGGAGACACTTTTaGAGAGCGAGACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWVWRHF*RARHSA
Trigger: AGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATAC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTTCTCCTCGAGGTACTaGGCCTGCTGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLFSSRY*ACCFCR
Trigger: CCTGCAGAAGCAGCAGGCCCAGTACCTCGAGGAGAA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAACCTCCTCCTCGCGCTaGGCCAGGAGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTTSSSR*ARRASR
Trigger: GCGGGAGGCCCTCCTGGCCCAGCGCGAGGAGGAGGT...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGCAGGAGAGGTGGGCTaGCCAGGATCAGGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWAGEVG*PGSGGS
Trigger: GCTGCCTCCTGATCCTGGCCAGCCCACCTCTCCTGC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGACGCTGAGGAGCAGTaGGCGTCCAGTGTAAGAGAC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCDAEEQ*ASSVRD
Trigger: GTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGTGGCCCCTTCTGAGTaGTCAGTGACAATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQVAPSE*SVTIKR
Trigger: CCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGCACAGCTTCTGCCTaGCCTGGGTGCGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESTASA*PGCEAD
Trigger: GTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGATAGTTTAGACTGTTaGGCTAGACCTGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRDSLDC*ARPGSP
Trigger: GGGTGAGCCAGGTCTAGCCCAACAGTCTAAACTATC...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATCGTTCTGCAGTGTCTaGGGTCACCTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAASFCSV*GHLTAT
Trigger: GGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGTCACTCACTTCGGTaGCAGGGGACACAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTGHSLR*QGTQPV
Trigger: CACTGGCTGTGTCCCCTGCCACCGAAGTGAGTGACC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp CTTCCCCACCCGACACTCAATATCATCTGTTGCTTATaGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGAC +
Preference number: 4 (lower is better)
Translates to: LPHPTLNIICCL*SRTWGRPGGLD
Trigger: GTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGATGTCCAACTCTCGATaGTGCCTCACAGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRMSNSR*CLTEQS
Trigger: AGACTGTTCTGTGAGGCATCATCGAGAGTTGGACAT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGCAGTGTCTGGGGTACTaGCATTTGTTGTTGAAATGC +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQQCLGY*HLLLKC
Trigger: GCATTTCAACAACAAATGTCAGTACCCCAGACACTG...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAAGGCGGGGCTCGCATaGCTTCCCTCACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCKAGLA*LPSHQL
Trigger: CAGCTGGTGTGAGGGAAGTCATGCGAGCCCCGCCTT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCACTGGACAGTGACATGTaGCAGGCCTCCCCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPLDSDM*QASPSV
Trigger: TACTGAGGGGGAGGCCTGTCACATGTCACTGTCCAG...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGATGAACTGGATCCGGTaGTATCACAGGCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRMNWIR*YHRPNA
Trigger: AGCATTTGGCCTGTGATATCACCGGATCCAGTTCAT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTACACTGGCTACAGCTaGTGGGACCCACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAYTGYS*WDPQQE
Trigger: TTCCTGTTGTGGGTCCCATCAGCTGTAGCCAGTGTA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCACCCTGCAGAGCGCTaGGGAGCTCGTAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHPAER*GARRDE
Trigger: TTCATCTCTACGAGCTCCTCAGCGCTCTGCAGGGTG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGGGACAAGCTGCGAGTaGGCGCCCTCTCGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAGTSCE*APSRSA
Trigger: TGCTGAGCGAGAGGGCGCTCACTCGCAGCTTGTCCC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGGGACAAGCTGCGAGTaGGCGCCCTCTCGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQGTSCE*APSRSA
Trigger: TGCTGAGCGAGAGGGCGCTCACTCGCAGCTTGTCCC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGCTGTCTGCCGCTGGCTaGGCCGCTCTGCCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYELSAAG*AALPPG
Trigger: GCCGGGAGGCAGAGCGGCTCAGCCAGCGGCAGACAG...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRALVLS*PDAWCR
Trigger: TCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFALVLS*PDAWCR
Trigger: TCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLRSTG*TADMRG
Trigger: CCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGGCCGTGGCCCCTTCTaGGTGGTCAGTGACAATCAA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRGRGPF*VVSDNQ
Trigger: TTGATTGTCACTGACCACTCAGAAGGGGCCACGGCC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGATGTGTCATGTGCCTaGAGGCTCCCTTTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAADVSCA*RLPLGF
Trigger: GAAGCCCAAAGGGAGCCTTCAGGCACATGACACATC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGGGGAAAGCCTCAAGTaGACAAAGATGAAAACACGG +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQGESLK*TKMKTR
Trigger: CCGTGTTTTCATCTTTGTTCACTTGAGGCTTTCCCC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGTGTCCAACCAGAACCTaGCCAAATCGTTTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRCPTRT*PNRFEW
Trigger: CCACTCAAAACGATTTGGTCAGGTTCTGGTTGGACA...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAAGAGTCCACAATAGGTaGTGGCTCCACCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQRVHNR*WLHLFP
Trigger: GGGGAAGAGGTGGAGCCAGCACCTATTGTGGACTCT...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACATTGCCTCACCTATaGCTGCTGCTAAGAGAGTAT +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQTLPHL*LLLREY
Trigger: ATACTCTCTTAGCAGCAGGCATAGGTGAGGCAATGT...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTTGACATGCAGAGTCTaGACAAAGTTTATCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGLTCRV*TKFIVS
Trigger: GGAGACGATAAACTTTGTGCAGACTCTGCATGTCAA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCTTCCTCAGGAGTACTaGCCATTGGTAGGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCLPQEY*PLVGSP
Trigger: GGGAGAGCCTACCAATGGGCAGTACTCCTGAGGAAG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTCACATTCTGGGCTCTaGTTGGAAGCCAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRSHSGL*LEARRD
Trigger: ATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGTGA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTGTGCTAGATCTTCCTaGTCCACTTCATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGCARSS*STSLSL
Trigger: CAAAGACAATGAAGTGGAGCAGGAAGATCTAGCACA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCTCGAGGTACTGGGCCTaGTGCTTCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSSRYWA*CFCRLA
Trigger: GGCCAACCTGCAGAAGCAGCAGGCCCAGTACCTCGA...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTTCCCCGTGTGTATATaGAGACAGGTCCCCATGTAC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLFPVCI*RQVPMY
Trigger: GTACATGGGGACCTGTCTGCATATACACACGGGGAA...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGCCGAGATCGAGGTGGTaGACATCACGTCTTTTATAC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRPRSRW*TSRLLY
Trigger: GTATAAAAGACGTGATGTGCACCACCTCGATCTCGG...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGTTCTGTTGCTGCACTaGAGACTGTATTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRVLLLH*RLYSWM
Trigger: CATCCAGGAATACAGTCTGCAGTGCAGCAACAGAAC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAAGTTCAACCCTTGCATaGACTAACACCTCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASSSTLA*TNTSPP
Trigger: GGGAGGGGAGGTGTTAGTGCATGCAAGGGTTGAACT...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTATCTCCAGCAGCCGCTaGCCCAATTCCATCCACAGG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTISSSR*PNSIHR
Trigger: CCTGTGGATGGAATTGGGGCAGCGGCTGCTGGAGAT...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCATGGCCTGTGCTCATaGCCTCAGGTGGTGACGAAA +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNHGLCS*PQVVTK
Trigger: TTTCGTCACCACCTGAGGGCATGAGCACAGGCCATG...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGACGCCCCATGGCCTGTaGTCATGCCCTCAGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRTPHGL*SCPQVV
Trigger: CACCACCTGAGGGCATGAGCACAGGCCATGGGGCGT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGCACAGGGAAGAAACTaGCCATCTGTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAAQGRN*PSVSGA
Trigger: TGCCCCAGAGACAGATGGCCAGTTTCTTCCCTGTGC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCACCTCCAGAGGAATACTaGGCTGTGCCTGGCTCCATG +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPPPEEY*AVPGSM
Trigger: CATGGAGCCAGGCACAGCCCAGTATTCCTCTGGAGG...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAAATCCGCACGTTCCTaGGTATCCCTTACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPKSARS*VSLTGS
Trigger: TGACCCTGTAAGGGATACCCAGGAACGTGCGGATTT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGCTTCTGGGATTGCTaGAGGGGCGGGACCCTCATG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESFWDC*RGGTLM
Trigger: CATGAGGGTCCCGCCCCTCCAGCAATCCCAGAAGCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGAAGTGCTTTGTCCTTaGCACAGTCAGCTGAGATTG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLREVLCP*HSQLRL
Trigger: CAATCTCAGCTGACTGTGCCAAGGACAAAGCACTTC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCCCATCAGACCCATCTaGCAACAGACATGGCAACAG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAPIRPI*QQTWQQ
Trigger: CTGTTGCCATGTCTGTTGCCAGATGGGTCTGATGGG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCACGGCATTCTTCTCTTaGCTCAACAAGACGTTTGGA +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSTAFFS*LNKTFG
Trigger: TCCAAACGTCTTGTTGAGCCAAGAGAAGAATGCCGT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCCATGGTACAGCTGTaGTCTGCTCCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIPMVQL*SAPSSF
Trigger: GAAGCTGGAGGGAGCAGACCACAGCTGTACCATGGG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTAGAGCTCCATGTCTGTaGGGAGCTCCTTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCRAPCL*GAPWQQ
Trigger: CTGTTGCCAAGGAGCTCCCCACAGACATGGAGCTCT...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTCTCGGTTTATCGCCTaGGTCATTGGGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDASRFIA*VIGPCF
Trigger: GAAGCAAGGCCCAATGACCCAGGCGATAAACCGAGA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGTCTCGGCAGCCTTTGTaGACAAAAGCACTGCAATTT +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQSRQPL*TKALQF
Trigger: AAATTGCAGTGCTTTTGTCCACAAAGGCTGCCGAGA...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGACCGAGGACGCTCCTTaGGCTGTGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQTEDAP*AVRACF
Trigger: GAAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGT...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTCCGCCATCATCCCCTaGCTGTACACACCACTCATG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCSAIIP*LYTPLM
Trigger: CATGAGTGGTGTGTACAGCCAGGGGATGATGGCGGA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGTCTTTGGAGCTGGCATaGACTTCTACCATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRSLELA*TSTISG
Trigger: TCCAGAGATGGTAGAAGTCCATGCCAGCTCCAAAGA...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTGGGGAGCAATCCTCTaGGAGAGGGGTGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEWGAIL*ERGAAL
Trigger: GAGTGCAGCACCCCTCTCCCAGAGGATTGCTCCCCA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTTTCTCCTCGAGGTACTaGGCCTGCTGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIFSSRY*ACCFCR
Trigger: CCTGCAGAAGCAGCAGGCCCAGTACCTCGAGGAGAA...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGTTCTCCTCGAGGTACTaGGCCTGCTGCTTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQFSSRY*ACCFCR
Trigger: CCTGCAGAAGCAGCAGGCCCAGTACCTCGAGGAGAA...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCCGTTCTGTCTGCCGCTaGCTGAGCCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEARSVCR*LSRSAS
Trigger: GGAGGCAGAGCGGCTCAGCCAGCGGCAGACAGAACG...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAACCCTGATTTGGCTATaGAAGGTGCAGATGGCGAGG +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQETLIWL*KVQMAR
Trigger: CCTCGCCATCTGCACCTTCCATAGCCAAATCAGGGT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCTGGATGAAGTTGGGTaGTTTGAGGGAATTCCGGGC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDALDEVG*FEGIPG
Trigger: GCCCGGAATTCCCTCAAACCACCCAACTTCATCCAG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGATCCTTGGGAAGACCTaGCTACAGAAAAAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRILGKT*LQKKSP
Trigger: AGGGCTCTTTTTCTGTAGCCAGGTCTTCCCAAGGAT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp AGTTCAAAACCAAGCCCAAACTCCCTGCCCTCTTCTTaGTCTCTGAGGATGGACGAGAGCGACGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SSKPSPNSLPSS*SLRMDESDGAG
Trigger: GCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGACAAAGAAGAGGGCAGGGAGTTTGGGCTTGGTTTTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTGCAGCTTCAGGTGCCTaGATGCCAGCACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIAASGA*MPAPTS
Trigger: AGAAGTTGGTGCTGGCATTCAGGCACCTGAAGCTGC...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCTCCTCAACTATGCTTaGCAAATCACAGGGACTTTC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQLLNYA*QITGTF
Trigger: GAAAGTCCCTGTGATTTGTCAAGCATAGTTGAGGAG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTCCAGAGGAGAAGGCTaGCTGCAGTTAAGAGCATCG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCSRGEG*LQLRAS
Trigger: CGATGCTCTTAACTGCAGTCAGCCTTCTCCTCTGGA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTGGACAGTGACATGTaGCAGGCCTCCCCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILDSDM*QASPSV
Trigger: TACTGAGGGGGAGGCCTGTCACATGTCACTGTCCAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTATGAACTGGATCCGGTaGTATCACAGGCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPMNWIR*YHRPNA
Trigger: AGCATTTGGCCTGTGATATCACCGGATCCAGTTCAT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGAGAATGTCGGTCCAGTaGAGCCGTGTCATCGGTGGA +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQRMSVQ*SRVIGG
Trigger: TCCACCGATGACACGGCTTCACTGGACCGACATTCT...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGATGTGTCATGTGCCTaGAGGCTCCCTTTGGGCTGC +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSDVSCA*RLPLGC
Trigger: GCAGCCCAAAGGGAGCCTTCAGGCACATGACACATC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCTTCTCACCTGAAAACTaGTTTACAAGCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSFSPEN*FTSTSP
Trigger: AGGGGATGTGCTTGTAAATCAGTTTTCAGGTGAGAA...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCCTTGGCAAACATCTaGCCACTCTTCATCCTCATG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSLANI*PLFILM
Trigger: CATGAGGATGAAGAGTGGTCAGATGTTTGCCAAGGA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTTAAAGGTCCTCCTTTaGGAGCCTCTTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPLKVLL*EPLLCW
Trigger: CCAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCCACTTCACTCGGTATTaGCTGGATAGTTTAGACTGT +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSHFTRY*LDSLDC
Trigger: ACAGTCTAAACTATCCAGTCAATACCGAGTGAAGTG...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTAACAACCAAAGCAGATaGAACATCACAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDANNQSR*NITAGR
Trigger: CCGCCCAGCTGTGATGTTTCATCTGCTTTGGTTGTT...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGGAACAAATCCCCCTaGGGACAACTTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRRNKSP*GQLPRG
Trigger: CCCCCTTGGAAGTTGTCCTCAGGGGGATTTGTTCCT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGTTGGAAGCACAGAGCTaGACCTTCACTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQLEAQS*TFTVSQ
Trigger: TTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAA...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCTTCAGGTGCCTGAATaGCAGCACCAACTTCTTATC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPLQVPE*QHQLLI
Trigger: GATAAGAAGTTGGTGCTGGCATTCAGGCACCTGAAG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGCACAGCATCTCCACTaGTCAGGGACTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIAQHLH*SGTPGL
Trigger: CAGACCAGGAGTCCCTGAGCAGTGGAGATGCTGTGC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCGTTATCACACAGTTTTaGAACCAAATCGCCACTAGA +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGVITQF*NQIATR
Trigger: TCTAGTGGCGATTTGGTTGCAAAACTGTGTGATAAC...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAGAGCGGAGCTGTTGTaGTCTGCCCCCAAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCRAELL*SAPKAS
Trigger: GGAAGCCTTGGGGGCAGAGCACAACAGCTCCGCTCT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTCCTTGGCAACAGGCTaGAGTAGGACAGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNSLATG*SRTGCA
Trigger: AGCACATCCTGTCCTACTGCAGCCTGTTGCCAAGGA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTGGGTCATTGGGCCTTaGTTCATCTTCAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPWVIGP*FIFSVA
Trigger: TGCTACACTGAAGATGAAGCAAGGCCCAATGACCCA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGAGAGCGAGACACTCTaGTGGGATCGTCTATTGGCA +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAESETL*WDRLLA
Trigger: TGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTC...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GTCTCTGAGGATGGACGAGAGCGACGGGGCTGGCTGGGACGCATCCATAGGTGGGTCAGTGAGAAGAACTaGTTGAACCTCTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: VSEDGRERRGWLGRIHRWVSEKN*LNLFQP
Trigger: AGGTTGAAAGAGGTTCAAGCAGTTCTTCTCACTGAC...CCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCGTCCATCCTCAGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCTGCGCTGCTTCTCCTaGTCAATGAGGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVLRCFS*SMRELG
Trigger: CCCGAGCTCCCTCATTGAGCAGGAGAAGCAGCGCAG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGCCAGGTCCTGGCGCTaGTTCTCCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLARSWR*FSRLRC
Trigger: GCAGCGCAGCCTGGAGAAGCAGCGCCAGGACCTGGC...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAGGTACTGGGCCTGCTaGTTCTGCAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCRYWAC*FCRLAR
Trigger: CCTGGCCAACCTGCAGAAGCAGCAGGCCCAGTACCT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCGCCTCCCGGCGCAGCTaGTCCTGTTCCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCASRRS*SCSLSS
Trigger: GCTTGAGAGGGAACAGGAGCAGCTGCGCCGGGAGGC...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGCCGAGATCGAGGTGGTaGACATCACGTCTTTTATAC +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEPRSRW*TSRLLY
Trigger: GTATAAAAGACGTGATGTGCACCACCTCGATCTCGG...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTCTGCCTGGCCTGGGTaGGAGGCTGACCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGSAWPG*EADPWQ
Trigger: CTGCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTGCACTGGCAGGAACTaGTACACATGGCTTCACCCT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNCTGRN*YTWLHP
Trigger: AGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTCTGCAAGGCCAGCTTaGAATTCATCAATAAGCACC +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRSARPA*NSSIST
Trigger: GGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCGGGAAGGCCCTCTTTaGAAGCACAGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEREGPL*KHRAAP
Trigger: AGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGTCTCTGGGGCACTaGAAGGATCCTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLSLGH*KDPVLS
Trigger: TGACAGCACAGGATCCTTCCAGTGCCCCAGAGACAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGCACAGGGAAGAAACTaGCCATCTGTCTCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPAQGRN*PSVSGA
Trigger: TGCCCCAGAGACAGATGGCCAGTTTCTTCCCTGTGC...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGGACTCCTGGTCTGTaGGCATTCCAGAAGATTTTG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAGTPGL*AFQKIL
Trigger: CAAAATCTTCTGGAATGCCCACAGACCAGGAGTCCC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGAAAGTGCGTCATCCTTaGTTACTGATTCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRKVRHP*LLIHCL
Trigger: CAGGCAGTGAATCAGTAACCAAGGATGACGCACTTT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTCTCGGTTTATCGCCTaGGTCATTGGGCCTTGCTTC +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNSRFIA*VIGPCF
Trigger: GAAGCAAGGCCCAATGACCCAGGCGATAAACCGAGA...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGCAAATGCTCTTCCTCTaGCTTTGGGAAGATGATGCT +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQQMLFL*LWEDDA
Trigger: AGCATCATCTTCCCAAAGCCAGAGGAAGAGCATTTG...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAGAGAAAGAGAGCGCATaGAGCTCCTTAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQEKESA*SSLGQS
Trigger: GCTCTGTCCTAAGGAGCTCCATGCGCTCTCTTTCTC...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTGAGAAAGAGAGCGCATaGAGCTCCTTAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCEKESA*SSLGQS
Trigger: GCTCTGTCCTAAGGAGCTCCATGCGCTCTCTTTCTC...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGATTCAGAATCTTTCTTaGAGGGGCTATGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRIQNLS*RGYVAG
Trigger: TCCTGCCACATAGCCCCTCCAAGAAAGATTCTGAAT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGAGCGAGACACTCTGCTaGGATCGTCTATTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAESETLC*DRLLAN
Trigger: ATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCT...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCAAGCAATATGCACTCTaGAATTCCAAGCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGKQYAL*NSKPSN
Trigger: GTTAGAAGGCTTGGAATTCCAGAGTGCATATTGCTT...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGGACTTCTACCATCTCTaGATCTGTCATCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEDFYHL*ICHPHA
Trigger: AGCATGGGGATGACAGATCCAGAGATGGTAGAAGTC...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGGTTCCTCTTTGGAGCTaGCATGGACTTCTACCATCT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEVPLWS*HGLLPS
Trigger: AGATGGTAGAAGTCCATGCCAGCTCCAAAGAGGAAC...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATCTAGGGCTATGTGTTaGGGAGCAATCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAASRAMC*GAILWE
Trigger: CTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAGTTCTCCTAAGATCTTaGCCATCATCTCCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTVLLRS*PSSPSS
Trigger: GGAAGAGGGAGATGATGGCCAAGATCTTAGGAGAAC...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGACCTCCTCCTCGCGCTaGGCCAGGAGGGCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQTSSSR*ARRASR
Trigger: GCGGGAGGCCCTCCTGGCCCAGCGCGAGGAGGAGGT...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGGATCCTCATCAGCTTaGTATGTGGATGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLGSSSA*YVDGKP
Trigger: AGGTTTCCCATCCACATACCAAGCTGATGAGGATCC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEDWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAACAGAGTGAACAGTGCTaGCTGCCACTTCACTCGGTA +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQQSEQC*LPLHSV
Trigger: TACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTG...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTCCAAATCGTTTTGAGTaGGGTCTGGGCAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPPNRFE*GLGRCE
Trigger: TTCACATCTGCCCAGACCCCACTCAAAACGATTTGG...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCGAGAGCGACGGGGCTaGCTGGGACGCATCCATAGG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWRERRG*LGRIHR
Trigger: CCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACGAGAGCGACGGGGCTaGCTGGGACGCATCCATAGG +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTRERRG*LGRIHR
Trigger: CCTATGGATGCGTCCCAGCCAGCCCCGTCGCTCTCG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp CGTACGCAAGTAAATCCCATCAGCACCAACCTCGTATaGTTCCAAACCCGGAGAACAGGGGCACCCGGCCTA +
Preference number: 4 (lower is better)
Translates to: RTQVNPISTNLV*FQTRRTGAPGL
Trigger: TAGGCCGGGTGCCCCTGTTCTCCGGGTTTGGAACAATACGAGGTTGGTGCTGATGGGATTTACTTGCGTACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGCGAGTACTTGTACAGTaGCGGAGGGTGGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRRVLVQ*RRVEPK
Trigger: TTTGGGTTCCACCCTCCGTCACTGTACAAGTACTCG...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTTTCACAACAATCATaGCCAGGAGCAATGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAVSQQS*PGAMVS
Trigger: GGAGACCATTGCTCCTGGTCATGATTGTTGTGAAAC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTGCATCATGCAAACTCTaGTCTGTCCCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPASCKL*SVPNTF
Trigger: GAATGTATTGGGGACAGATCAGAGTTTGCATGATGC...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTCTGTGCCTGGCTCCATaGCCAAGTCTCTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLCLAP*PSLSEA
Trigger: TGCTTCAGAGAGACTTGGTCATGGAGCCAGGCACAG...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTTACAGGGTCAGAGGTaGCTGTATGAGCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLLQGQR*LYEPVG
Trigger: ACCCACAGGCTCATACAGTCACCTCTGACCCTGTAA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTCCACCAAGTCCTGTaGGACTGGTATTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILHQVL*DWYSPS
Trigger: GGATGGGGAATACCAGTCTCACAGGACTTGGTGGAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTTGCAGGCACTTCAGTaGTACTGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLLQALQ*YCPSPP
Trigger: AGGAGGAGATGGACAGTATCACTGAAGTGCCTGCAA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACCAATCCAGGATGGCTaGTTGTCATTAATGAGATGG +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTPIQDG*LSLMRW
Trigger: CCATCTCATTAATGACAATCAGCCATCCTGGATTGG...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTACACTGGCTACAGCTaGTGGGACCCACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLYTGYS*WDPQQE
Trigger: TTCCTGTTGTGGGTCCCATCAGCTGTAGCCAGTGTA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTACTTGGTAATCCGCTaGGTTACAAGCAATATGCAC +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRYLVIR*VTSNMH
Trigger: GTGCATATTGCTTGTAACTCAGCGGATTACCAAGTA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTGTGAGAAGAACTGCTTaGACCTCTTTCAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPVRRTA*TSFNLP
Trigger: AGGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCAC...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCCACTCACCAAACCCTaGAGGATCTCCACCTCATTT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCPLTKP*RISTSF
Trigger: AAATGAGGTGGAGATCCTTCAGGGTTTGGTGAGTGG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAATACTGGGTGAACTGCTaGTATGCGGGGGCTCCGGGT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQYWVNC*YAGAPG
Trigger: ACCCGGAGCCCCCGCATATCAGCAGTTCACCCAGTA...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWLRSTG*TADMRG
Trigger: CCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACTTTGGGCTTCATTTTaGCCTTTGCACAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASLWASF*PLHRRL
Trigger: TAGCCTCCTGTGCAAAGGTCAAAATGAAGCCCAAAG...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR TCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGCCTTTGGTCTGTTTCTaGAGGGTGAGTATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEPLVCF*RVSILH
Trigger: ATGGAGAATACTCACCCTTCAGAAACAGACCAAAGG...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCATCCACGGTGTTTTTGTaGAGAGCACGTACGCAAGTA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASSTVFL*RARTQV
Trigger: TACTTGCGTACGTGCTCTTCACAAAAACACCGTGGA...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCTCTTTGTGACCACTTaGAGCCCATTCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCLFVTT*SPFTRT
Trigger: AGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACTGAAACTTCTCCTATaGATGGGAGGTCTCCTGACA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASLKLLL*MGGLLT
Trigger: TGTCAGGAGACCTCCCATTCATAGGAGAAGTTTCAG...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGTTGGAAGCACAGAGCTaGACCTTCACTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAELEAQS*TFTVSQ
Trigger: TTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAA...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCGGCCACCTGGCTTCTaGAACAGGAACCACGTCAAC +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWRPPGF*NRNHVN
Trigger: GTTGACGTGGTTCCTGTTGCAGAAGCCAGGTGGCCG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCGTCCGTGGGCTCCGGTaGACAGGGAAGAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCVRGLR*TGKKLA
Trigger: GGCCAGTTTCTTCCCTGTGCACCGGAGCCCACGGAC...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGCACAGCATCTCCACTaGTCAGGGACTCCTGGTCTG +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWAQHLH*SGTPGL
Trigger: CAGACCAGGAGTCCCTGAGCAGTGGAGATGCTGTGC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGCTTACTTGTGACGTaGACGTCAGAGGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSGLLVT*TSEAPA
Trigger: AGCTGGAGCCTCTGACGTGCACGTCACAAGTAAGCC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGGTTATCACACAGTTTTaGAACCAAATCGCCACTAGA +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQVITQF*NQIATR
Trigger: TCTAGTGGCGATTTGGTTGCAAAACTGTGTGATAAC...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATCTTGTGAGCTGGGTTaGCTTGCTGTGGTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPSCELG*LAVVLS
Trigger: CGAAAGCACCACAGCAAGGCAACCCAGCTCACAAGA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGGGGCGGGACCCTCATaGTCTCCACCAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTGAGPS*SPPSPV
Trigger: CACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGGGGCGGGACCCTCATaGTCTCCACCAAGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWGAGPS*SPPSPV
Trigger: CACAGGACTTGGTGGAGAGCATGAGGGTCCCGCCCC...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTCCAGCAAAACATCCTaGAAGGCTCCCCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESSKTS*KAPRGF
Trigger: GAAGCCACGGGGAGCCTTGCAGGATGTTTTGCTGGA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGGAAGCCAGAAGAGATaGTGCATCAGGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSGSQKR*CIRAWL
Trigger: GAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGAATCCATCAAGGCTTTaGCGATCTCTTGACCTGTTT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRNPSRL*RSLDLF
Trigger: AAACAGGTCAAGAGATCGGCAAAGCCTTGATGGATT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGAGAGCGAGACACTCTaGTGGGATCGTCTATTGGCA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLESETL*WDRLLA
Trigger: TGCCAATAGACGATCCCAGCAGAGTGTCTCGCTCTC...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGGACCGACCACATCTTaGTCAATGGGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSGPTTS*SMGLLT
Trigger: TGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGTCCTCCAAAGGTCTCTaGTCTCCGGGGCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRSSKGL*SPGQGN
Trigger: GTTTCCCTGCCCCGGAGAGCAGAGACCTTTGGAGGA...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACATCGAGGTACTGGGCCTaGTGCTTCTGCAGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTSRYWA*CFCRLA
Trigger: GGCCAACCTGCAGAAGCAGCAGGCCCAGTACCTCGA...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCATGCAGGTTCAGTACTaGCCTCCTGCAAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFMQVQY*PPANPR
Trigger: CCTGGGATTTGCAGGAGGGCAGTACTGAACCTGCAT...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATCCCCACGCCTCCCCTaGGCATCCCATGCGGGCAGC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTSPRLP*ASHAGS
Trigger: GCTGCCCGCATGGGATGCGCAGGGGAGGCGTGGGGA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAAAGTGCGTCATCCTTaGTTACTGATTCACTGCCTG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPKVRHP*LLIHCL
Trigger: CAGGCAGTGAATCAGTAACCAAGGATGACGCACTTT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTGGCCAGACTTGCTCCTaGTGGCACCAGGCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGGQTCS*WHQALG
Trigger: GCCCAGAGCCTGGTGCCACCAGGAGCAAGTCTGGCC...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCGGAATCAGGATGTCTTaGGTGTTGTGTGATATATTC +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSGIRMS*VLCDIF
Trigger: GAATATATCACACAACACCCAAGACATCCTGATTCC...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGCTTCATCGTCTATTTaGGCTTCCTCAGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLASSSI*ASSASP
Trigger: GGGTGACGCTGAGGAAGCCCAAATAGACGATGAAGC...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATATCGCCTGGGTCATTaGGCCTTGCTTCATCTTCAG +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQYRLGH*ALLHLQ
Trigger: CTGAAGATGAAGCAAGGCCCAATGACCCAGGCGATA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAACTCTTCCTCTGGCTTTaGGAAGATGATGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQELFLWL*EDDAVH
Trigger: ATGGACAGCATCATCTTCCCAAAGCCAGAGGAAGAG...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATTCCTCACCACTGAATaGGTGTCTGAGCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPFLTTE*VSELFG
Trigger: GCCGAAGAGCTCAGACACCCATTCAGTGGTGAGGAA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGCCAGCCCAACCTGAGAGTCCTGGGCAGTCACAAATCATGGCCGAAGCAGAGATCCTATGTTCTCTCTaGTCTGACTCCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: GPAQPESPGQSQIMAEAEILCSL*SDSRSS
Trigger: AGAGGATCTGGAGTCAGACCAGAGAGAACATAGGAT...CTCTGCTTCGGCCATGATTTGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGCTGCTTCCAGCTGTTTaGACTCAATCTCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLLLPAV*TQSQSL
Trigger: GAGACTTTGAGATTGAGTCCAAACAGCTGGAAGCAG...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGAGCATCACTGTTGACTTCTaGTCCAATGATGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: VAYCPGPGAAQEDWTLRSITVDF*SNDAKM
Trigger: CATCTTTGCATCATTGGACCAGAAGTCAACAGTGAT...GCTCCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTAGCTTCAGAGCACAGCTTCTGCCTGGCCTGGGTGCGAGGCTGACCCCTGGCTTAATTCTCGGGCTCTaGTGTCCAACATTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PSFRAQLLPGLGARLTPGLILGL*CPTFSF
Trigger: AAAAGAAAATGTTGGACACCAGAGCCCGAGAATTAA...GCCAGGGGTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGAAGCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTCGTTCTGTCTGCCGCTaGCTGAGCCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCRSVCR*LSRSAS
Trigger: GGAGGCAGAGCGGCTCAGCCAGCGGCAGACAGAACG...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCGTTCTGTCTGCCGCTaGCTGAGCCGCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFRSVCR*LSRSAS
Trigger: GGAGGCAGAGCGGCTCAGCCAGCGGCAGACAGAACG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATACTGGGGAAGAACGATaGGATCCTCATCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNTGEER*DPHQLG
Trigger: ACCAAGCTGATGAGGATCCCATCGTTCTTCCCCAGT...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTGGTCCTTTGTTTGTCTaGCTGGTTGAACTCAGTATG +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPGPLFV*LVELSM
Trigger: CATACTGAGTTCAACCAGCCAGACAAACAAAGGACC...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGGCTCTGCCCTTCTaGTCCTTTGTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLALPF*SFVCLA
Trigger: AGCCAGACAAACAAAGGACCAGAAGGGCAGAGCCAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAACACCGAGATCGAGGTaGTGCACATCACGTCTTTTA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASTPRSR*CTSRLL
Trigger: TAAAAGACGTGATGTGCACCACCTCGATCTCGGTGT...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGTTTTGAGTGGGGTCTaGGCAGATGTGAAATCTCTA +
Preference number: 4 (lower is better)
Translates to: SSVAYCPGPGAAQEDWTLVLSGV*ADVKSL
Trigger: TAGAGATTTCACATCTGCCCAGACCCCACTCAAAAC...CAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGTGGACAGCAACTTCTaGATCAAGTTCTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASVDSNF*IKFWPL
Trigger: TAGAGGCCAGAACTTGATCCAGAAGTTGCTGTCCAC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTGCCTGGCTGTCCTCTaGGCACAGCTGGGCCACCAT +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWCLAVL*AQLGHH
Trigger: ATGGTGGCCCAGCTGTGCCCAGAGGACAGCCAGGCA...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGAAGTTCAAAGCCTGCTaGTTTCCAGCACTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLKFKAC*FPALVA
Trigger: AGCAACCAGTGCTGGAAATCAGCAGGCTTTGAACTT...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGATGACCAAGTCTCTCTaGAGCACAGCATCTCCACTG +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRMTKSL*STASPL
Trigger: CAGTGGAGATGCTGTGCTTCAGAGAGACTTGGTCAT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAGTACTTTCCCCTCCCTaGAGCACATTCTTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQVLSPP*STFFQT
Trigger: TGTTTGGAAGAATGTGCTTCAGGGAGGGGAAAGTAC...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATGTAGAACAAATGGGTaGGGATTTGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQECRTNG*GFALLA
Trigger: AGCCAAAAGGGCAAATCCTCACCCATTTGTTCTACA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACACAAGGCTTCCTGCCTTaGCTCTGTGGCCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTQGFLP*LCGQTC
Trigger: GCAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTG...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCTCAGGGCTGGACAGTaGCATGTGACAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLLRAGQ*HVTGLP
Trigger: GGGGAGGCCTGTCACATGTCACTGTCCAGCCCTGAG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTCATCACTGGGTGAGTaGAAGAGGTCAGAATCACTC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLSSLGE*KRSESL
Trigger: GAGTGATTCTGACCTCTTTCACTCACCCAGTGATGA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAATGAACTGGATCCGGTaGTATCACAGGCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAMNWIR*YHRPNA
Trigger: AGCATTTGGCCTGTGATATCACCGGATCCAGTTCAT...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGAGAATGTCGGTCCAGTaGAGCCGTGTCATCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRRMSVQ*SRVIGG
Trigger: TCCACCGATGACACGGCTTCACTGGACCGACATTCT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGCATCTTTGTTGGTaGAGGGCTTCATACACTGGC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLRHLCW*RASYTG
Trigger: GCCAGTGTATGAAGCCCTTCACCAACAAAGATGCCT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTTGGGCTGCTTCATTTTaGCCTTTGCACAGGAGGCTA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIWAASF*PLHRRL
Trigger: TAGCCTCCTGTGCAAAGGTCAAAATGAAGCAGCCCA...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACATACTTGGTAATCCGCTaGGTTACAAGCAATATGCAC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTYLVIR*VTSNMH
Trigger: GTGCATATTGCTTGTAACTCAGCGGATTACCAAGTA...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAGTGAGAAGAACTGCTTaGACCTCTTTCAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEVRRTA*TSFNLP
Trigger: AGGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCAC...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTTAAAGGTCCTCCTTTaGGAGCCTCTTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCLKVLL*EPLLCW
Trigger: CCAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGTTTGTCTGGCTGGTTaGACTCAGTATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASVCLAG*TQYVKR
Trigger: CCTTTTCACATACTGAGTTCAACCAGCCAGACAAAC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTAGGGCCAGCCCAACCTaGGAGTCCTGGGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGRASPT*ESWAVT
Trigger: TGTGACTGCCCAGGACTCTCAGGTTGGGCTGGCCCT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCACTTCTGAGTGGTCAGTaGCAATCAAAAGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAALLSGQ*QSKGVT
Trigger: CGTGACACCTTTTGATTGTCACTGACCACTCAGAAG...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCCAGCCACCCTCTTTGTaGCCACTTGAAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSQPPSL*PLEAHS
Trigger: TGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCTG...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTTTGCAAACAAGCAATaGGAGCAGAGGTATCCGGTG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCFANKQ*EQRYPV
Trigger: CACCGGATACCTCTGCTCTCATTGCTTGTTTGCAAA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCGCCCCCAAGGCTTCCTaGCTTGACTCTGTGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCAPKAS*LDSVAR
Trigger: TCTGGCCACAGAGTCAAGGCAGGAAGCCTTGGGGGC...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACACGTCTGGCATTTCTaGTGCTGGCTCAGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTHVWHF*CWLRPL
Trigger: CAGGGGCCTGAGCCAGCAGCAGAAATGCCAGACGTG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTAATCCATCAAGGCTTTaGCGATCTCTTGACCTGTTT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPNPSRL*RSLDLF
Trigger: AAACAGGTCAAGAGATCGGCAAAGCCTTGATGGATT...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGTGTGGACAAAAGCACTaGAATTTGCACAAGTATAGG +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRCGQKH*NLHKYR
Trigger: CCTATACTTGTGCAAATTGCAGTGCTTTTGTCCACA...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGGCTGTTTTAGAAACTTaGTGTCTATTATCCGACTCC +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRAVLET*CLLSDS
Trigger: GGAGTCGGATAATAGACAGCAAGTTTCTAAAACAGC...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTTTTCTACCATCTGCTaGTCAAAAAGCAGATCCGCC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAFSTIC*SKSRSA
Trigger: GGCGGATCTGCTTTTTGAGCAGCAGATGGTAGAAAA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAAGCTTTTCTACCATCTaGTGCTCAAAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTSFSTI*CSKSRS
Trigger: GGATCTGCTTTTTGAGCAGCAGATGGTAGAAAAGCT...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGACAGACTGGTTATGTTaGCCACAAAACTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQTDWLC*PQNLPY
Trigger: ATATGGCAAGTTTTGTGGGCAACATAACCAGTCTGT...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCTGCGCTGCTTCTCCTaGTCAATGAGGGAGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCLRCFS*SMRELG
Trigger: CCCGAGCTCCCTCATTGAGCAGGAGAAGCAGCGCAG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGCTGCTTCTCCAGGCTaGGCTGCTTCTCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTAASPG*AASPAQ
Trigger: TTGAGCAGGAGAAGCAGCGCAGCCTGGAGAAGCAGC...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTGCCAGGTCCTGGCGCTaGTTCTCCAGGCTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIARSWR*FSRLRC
Trigger: GCAGCGCAGCCTGGAGAAGCAGCGCCAGGACCTGGC...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGGTCATACTGGTATGTaGCCTTCTTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRGHTGM*PSSAGA
Trigger: AGCTCCAGCAGAAGAAGGGCACATACCAGTATGACC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCGGTCATACTGGTATGTaGCCTTCTTCTGCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFGHTGM*PSSAGA
Trigger: AGCTCCAGCAGAAGAAGGGCACATACCAGTATGACC...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGCCTCCCGGCGCAGCTaGTCCTGTTCCCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYASRRS*SCSLSS
Trigger: GCTTGAGAGGGAACAGGAGCAGCTGCGCCGGGAGGC...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGGTCCGTCCAGGCACTaGCCTTGTGCTAAGTTGACC +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQGPSRH*PCAKLT
Trigger: GGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGTGGTGGAGATCTCTaGCTTCCAGACTCCTCTCTA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSGGGDL*LPDSSL
Trigger: TAGAGAGGAGTCTGGAAGGCAGAGATCTCCACCACC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTCAGAGCACAGCTTCTaGCTGGCCTGGGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGSEHSF*LAWVRG
Trigger: GCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTACCATGAACTGTCCTaGACACACCAGCTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRYHELS*THQLGK
Trigger: TTTCCCCAGCTGGTGTGTGCAGGACAGTTCATGGTA...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCATTACAAGGAGAAGAATaGAGGTTCAGTACTGCCCTC +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASLQGEE*RFSTAL
Trigger: GAGGGCAGTACTGAACCTGCATTCTTCTCCTTGTAA...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAATCTCCAGCAGCCGCTaGCCCAATTCCATCCACAGG +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTISSSR*PNSIHR
Trigger: CCTGTGGATGGAATTGGGGCAGCGGCTGCTGGAGAT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGGCGTCGCCCCTTCCTaGTTGTGGATACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAGVAPS*LWILRA
Trigger: AGCTCTCAGTATCCACAACCAGGAAGGGGCGACGCC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGTCTTTTGCAGCAGCTaGAATCACCACAGAATTCTG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAVFCSS*NHHRIL
Trigger: CAGAATTCTGTGGTGATTCCAGCTGCTGCAAAAGAC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCGGGTCCGTCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGTTTGTTTCTGAGTTCTaGTGTGGCATTACATCTTCT +
Preference number: 4 (lower is better)
Translates to: PGPSRHCPCAKLTRRLVQFVSEF*CGITSS
Trigger: AGAAGATGTAATGCCACACCAGAACTCAGAAACAAA...CTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGACGGACCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGGTGGATCTTGTGAGCTaGGTTGCCTTGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRVDLVS*VALLWC
Trigger: GCACCACAGCAAGGCAACCCAGCTCACAAGATCCAC...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAATATTACTGCCTGGTCTaGCACCAGTTCTTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEYYCLV*HQFFLH
Trigger: ATGGAGAAAGAACTGGTGCCAGACCAGGCAGTAATA...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAATCTTGTCCAGGAGGTaGTGTTCTCTGCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPILSRR*CSLLFL
Trigger: CAGGAAGAGCAGAGAACACCACCTCCTGGACAAGAT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAACCTGCCTTGACTCTGTaGCCAGACTTGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQPALTL*PDLLLV
Trigger: CACCAGGAGCAAGTCTGGCCACAGAGTCAAGGCAGG...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAACGGCATTCTTCTCTTaGCTCAACAAGACGTTTGGA +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQETAFFS*LNKTFG
Trigger: TCCAAACGTCTTGTTGAGCCAAGAGAAGAATGCCGT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGAAGTTCTCACATTCTaGGCTCTGCTTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTEVLTF*ALLGSQ
Trigger: CTGGCTTCCAAGCAGAGCCCAGAATGTGAGAACTTC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACTCCTCCACGTCGCCTaGGTCAGCAGGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTLLHVA*VSRLTL
Trigger: GAGAGTGAGCCTGCTGACCCAGGCGACGTGGAGGAG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGAGAAAGAGAGCGCATaGAGCTCCTTAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSEKESA*SSLGQS
Trigger: GCTCTGTCCTAAGGAGCTCCATGCGCTCTCTTTCTC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATTCCTCACCACTGAATaGGTGTCTGAGCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIFLTTE*VSELFG
Trigger: GCCGAAGAGCTCAGACACCCATTCAGTGGTGAGGAA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCATTGTGGAAGGTACTGTaGAAGGGCCGTGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPLWKVL*KGRELS
Trigger: GGACAATTCACGGCCCTTCCACAGTACCTTCCACAA...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAAGGGCTTCATACACTaGCTACAGCTGATGGGACCC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEKGFIH*LQLMGP
Trigger: GGGTCCCATCAGCTGTAGCCAGTGTATGAAGCCCTT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTATTGGCAAATATTaGGGTGGTAGCGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSIGKY*GGSGFI
Trigger: GATGAAACCGCTACCACCCCAATATTTGCCAATAGA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAAGTATGGAGACACTTTTaGAGAGCGAGACACTCTGCT +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQVWRHF*RARHSA
Trigger: AGCAGAGTGTCTCGCTCTCCAAAAGTGTCTCCATAC...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGCAGTCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACAATCCTCTGGAAGAATTaGCTATGGATACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: GSHKSWPKQSLGLLPHPTILWKN*LWILIS
Trigger: GCTGATCAGTATCCATAGCCAATTCTTCCAGAGGAT...TGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGAGGATCACTGTTGACTTCTaGTCCAATGATGCAAAGATG +
Preference number: 4 (lower is better)
Translates to: SVAYCPGPGAAQEDWTLRITVDF*SNDAKM
Trigger: CATCTTTGCATCATTGGACCAGAAGTCAACAGTGAT...CCTCAGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAGGTTGGCCAGGTCCTaGCGCTGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFRLARS*RCFSRL
Trigger: CAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAACCT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCGCTCCAGGTCATACTaGTATGTGCCCTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSERSRSY*YVPFFC
Trigger: GCAGAAGAAGGGCACATACCAGTATGACCTGGAGCG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGGATCCTCATCAGCTTaGTATGTGGATGGGAAACCT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNGSSSA*YVDGKP
Trigger: AGGTTTCCCATCCACATACCAAGCTGATGAGGATCC...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAACTGGGGAAGAACGATaGGATCCTCATCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPTGEER*DPHQLG
Trigger: ACCAAGCTGATGAGGATCCCATCGTTCTTCCCCAGT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTACCCTGATTTGGCTATaGAAGGTGCAGATGGCGAGG +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSTLIWL*KVQMAR
Trigger: CCTCGCCATCTGCACCTTCCATAGCCAAATCAGGGT...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAACCAATGACCCTGATTTaGCTATGGAAGGTGCAGATG +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQPMTLI*LWKVQM
Trigger: CATCTGCACCTTCCATAGCCAAATCAGGGTCATTGG...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGCAAGCCTTCTCTCACTaGTTTCACAAATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRQAFSH*FHKCLS
Trigger: TGACAAACATTTGTGAAACCAGTGAGAGAAGGCTTG...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTCTCACGGTTAGGTGGTaGAGATCTCTGCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLTVRW*RSLPSR
Trigger: TCTGGAAGGCAGAGATCTCCACCACCTAACCGTGAG...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTCAGAGTGAACAGTGCTaGCTGCCACTTCACTCGGTA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSQSEQC*LPLHSV
Trigger: TACCGAGTGAAGTGGCAGCCAGCACTGTTCACTCTG...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGGCGTGGAAACAGTATaGGGAATTCAGTCCGAGTCA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRGVETV*GIQSES
Trigger: TGACTCGGACTGAATTCCCCATACTGTTTCCACGCC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTAGCGACGGGGCTGGCTaGGACGCATCCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSASDGAG*DASIGG
Trigger: GCCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCGGACTGCAGCACAGGTaGTCCCACCTGGTTGTAGGG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCGLQHR*SHLVVG
Trigger: CCCTACAACCAGGTGGGACCACCTGTGCTGCAGTCC...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGGGACAGGAAGCCAGTATGTTGTaGCAAAATTCGAGAAAACAC +
Preference number: 4 (lower is better)
Translates to: DAEEQWASSVRDLCTRGQEASML*QNSRKH
Trigger: GTGTTTTCTCGAATTTTGCCACAACATACTGGCTTC...CTGTCCCCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp ATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATaGATGTCAAGCTCTGTGGCGACGTGCTCTAACTTC +
Preference number: 4 (lower is better)
Translates to: ITAGRGVRDPLT*MSSSVATCSNF
Trigger: GAAGTTAGAGCACGTCGCCACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
3UTR CAA 72 bp CTGGGGTCACCTCACAGCCACCCTCTTTGTGACCACTaGAAGCCCATTCACCAGGACTGTCTTTCTAAACTC +
Preference number: 4 (lower is better)
Translates to: LGSPHSHPLCDH*KPIHQDCLSKL
Trigger: GAGTTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCTGTGAGGTGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCTGGTTGCTAGGAATTaGGCTGCATCATACGCTTCA +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTLVARN*AASYAS
Trigger: TGAAGCGTATGATGCAGCTCAATTCCTAGCAACCAG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAAGTTCAAAGCCTGCTaGTTTCCAGCACTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRKFKAC*FPALVA
Trigger: AGCAACCAGTGCTGGAAATCAGCAGGCTTTGAACTT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGCAGCTTCAGGTGCCTaGATGCCAGCACCAACTTCT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAAASGA*MPAPTS
Trigger: AGAAGTTGGTGCTGGCATTCAGGCACCTGAAGCTGC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTGACTGTCCATCTGCTTaGGGTTTGTTTTCATTAGTT +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPDCPSA*GLFSLV
Trigger: AACTAATGAAAACAAACCTCAAGCAGATGGACAGTC...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTGTAGAACAAATGGGTaGGGATTTGCCCTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCCRTNG*GFALLA
Trigger: AGCCAAAAGGGCAAATCCTCACCCATTTGTTCTACA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTGTCACTGTGTTCTGTTaGCATGCAGAGTCTGCACAA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIVTVFC*HAESAQ
Trigger: TTGTGCAGACTCTGCATGTCAACAGAACACAGTGAC...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTGTTATCCACCACTTTaGAAGGACAAAAATCCGCAC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDACYPPL*KDKNPH
Trigger: GTGCGGATTTTTGTCCTTTCAAAGTGGTGGATAACA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAAGCTGCAGAGCTTTCTaGAACCACCAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPSCRAF*NHQKFS
Trigger: GGAAAACTTCTGGTGGTTTCAGAAAGCTCTGCAGCT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCCCATCATCATGGGCTaGGAGCTCCATGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWPIIMG*ELHVCG
Trigger: CCCACAGACATGGAGCTCTCAGCCCATGATGATGGG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTCATCACTGGGTGAGTaGAAGAGGTCAGAATCACTC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLSSLGE*KRSESL
Trigger: GAGTGATTCTGACCTCTTTCACTCACCCAGTGATGA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCGTGTCATCGGTGGATaGACTGGATCCGGTGATATC +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWRVIGG*TGSGDI
Trigger: GATATCACCGGATCCAGTTCATCCACCGATGACACG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTGCAGGCACTTCAGTaGTACTGTCCATCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLQALQ*YCPSPP
Trigger: AGGAGGAGATGGACAGTATCACTGAAGTGCCTGCAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTATTGGCTATGGATACTaGTCAGCTCATCCAAACAGG +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCIGYGY*SAHPNR
Trigger: CCTGTTTGGATGAGCTGATCAGTATCCATAGCCAAT...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTCCTTGGCAAACATCTaGCCACTCTTCATCCTCATG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLSLANI*PLFILM
Trigger: CATGAGGATGAAGAGTGGTCAGATGTTTGCCAAGGA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAACTGTCATCCCCATGCTaGTCAGGAATAAACCTTTCT +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQLSSPC*SGINLS
Trigger: AGAAAGGTTTATTCCTGATCAGCATGGGGATGACAG...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCTTAAAGGTCCTCCTTTaGGAGCCTCTTCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFLKVLL*EPLLCW
Trigger: CCAACACAGAAGAGGCTCTCAAAGGAGGACCTTTAA...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGCTCAATGGGGCTGCTaGCAGTCGGCCCAAGTGTGC +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIAQWGC*QSAQVC
Trigger: GCACACTTGGGCCGACTGTCAGCAGCCCCATTGAGC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGAGGGAAACCAGTCTCTaGGGAGTACTGGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWRETSL*GVLGEL
Trigger: CAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCT...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGICCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGCTTCTGAGTGGTCAGTaGCAATCAAAAGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQLLSGQ*QSKGVT
Trigger: CGTGACACCTTTTGATTGTCACTGACCACTCAGAAG...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGGGAAAGCCTCAAGTaGACAAAGATGAAAACACGG +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTGESLK*TKMKTR
Trigger: CCGTGTTTTCATCTTTGTTCACTTGAGGCTTTCCCC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCTCTTTGTGACCACTTaGAGCCCATTCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSELFVTT*SPFTRT
Trigger: AGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGGAAGGTGACGTGCCACTCTCCTTGGGTAATCCCTAGGGTCATTTCGCTGCAAGGGCAATGGTGTGACTaGCCAGCTCTTTCATTGAAG +
Preference number: 4 (lower is better)
Translates to: RKVTCHSPWVIPRVISLQGQWCD*PALSLK
Trigger: CTTCAATGAAAGAGCTGGTCAGTCACACCATTGCCC...TTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGGTCCGTGGGCTCCGGTaGACAGGGAAGAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRVRGLR*TGKKLA
Trigger: GGCCAGTTTCTTCCCTGTGCACCGGAGCCCACGGAC...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAAGGTAGAGAGGGAGTaGTCCTTTCCCTGCCTGAAG +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCKVERE*SFPCLK
Trigger: CTTCAGGCAGGGAAAGGAGCACTCCCTCTCTACCTT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGCCAGAAGAGATGCTaGATCAGGGCATGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESQKRC*IRAWLY
Trigger: ATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGGCTCCCTTTGGGCTaGTTCATTTTGACCTTTGCA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRRLPLG*FILTFA
Trigger: TGCAAAGGTCAAAATGAAGCAGCCCAAAGGGAGCCT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCCGACTCCAAGACTCTaGTTCCAGCTGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVPTPRL*FQLFGL
Trigger: GAGTCCAAACAGCTGGAAGCAGAGTCTTGGAGTCGG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTTTCTACCATCTGCTaGTCAAAAAGCAGATCCGCC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQFSTIC*SKSRSA
Trigger: GGCGGATCTGCTTTTTGAGCAGCAGATGGTAGAAAA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTCATAACTTGCCACTTTaGTGTCTACAGCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAHNLPL*CLQLQS
Trigger: TGATTGGAGCTGTAGACAGCAAAGTGGCAAGTTATG...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCTGGGCCTGCTGCTTCTaGAGGTTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIWACCF*RLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAGGCCCA...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGAGGTACTGGGCCTGCTaGTTCTGCAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLRYWAC*FCRLAR
Trigger: CCTGGCCAACCTGCAGAAGCAGCAGGCCCAGTACCT...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTACTCACGCTCGCGCCTaGGCTTCTCCTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGTHARA*ASPRGT
Trigger: AGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATCCTTTTCCAGGTCCTaGTGCCCCTGCTGCACCTCC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTSFSRS*CPCCTS
Trigger: GGAGGTGCAGCAGGGGCAGCAGGACCTGGAAAAGGA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTGTGTGTCCGAGAGATaGTGTTCCTTTTTGGGGACA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLCVSER*CSFLGT
Trigger: TGTCCCCAAAAAGGAACAGCATCTCTCGGACACACA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACAAGGGCCAGACAGCTaGTGTCTGGGAGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTQGPDS*CLGEAR
Trigger: TCGTGCCTCTCCCAGACAGCAGCTGTCTGGCCCTTG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCAAGGGCCAGACAGCTaGTGTCTGGGAGAGGCACGA +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFQGPDS*CLGEAR
Trigger: TCGTGCCTCTCCCAGACAGCAGCTGTCTGGCCCTTG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCGAAGCCCCTCCGGACTaGAGCACAGGTGGTCCCACC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPEAPPD*STGGPT
Trigger: GGTGGGACCACCTGTGCTGCAGTCCGGAGGGGCTTC...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACCCCTGCGCATCCCATaGGGGCAGCAGCACACAGGA +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTPLRIP*GQQHTG
Trigger: TCCTGTGTGCTGCTGCCCGCATGGGATGCGCAGGGG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGATGGGGGTCCTGACTaGTCAAGAAAACGGGTAAAG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEDGGPD*SRKRVK
Trigger: CTTTACCCGTTTTCTTGACCAGTCAGGACCCCCATC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCCTGTCTCTGGGGCACTaGAAGGATCCTGTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALSLGH*KDPVLS
Trigger: TGACAGCACAGGATCCTTCCAGTGCCCCAGAGACAG...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAACTGCTCAGGGACTCCTaGTCTGTGGGCATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQLLRDS*SVGIPE
Trigger: TTCTGGAATGCCCACAGACCAGGAGTCCCTGAGCAG...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTAAATCCGCACGTTCCTaGGTATCCCTTACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSKSARS*VSLTGS
Trigger: TGACCCTGTAAGGGATACCCAGGAACGTGCGGATTT...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCACCTGCCTTGACTCTGTaGCCAGACTTGCTCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSPALTL*PDLLLV
Trigger: CACCAGGAGCAAGTCTGGCCACAGAGTCAAGGCAGG...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTATCTGGCAACAGACATaGCAACAGAGCGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSIWQQT*QQSGAV
Trigger: AACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGAT...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCTGTGGGGAGCTCCTTaGCAACAGGCTGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCLWGAP*QQAAVG
Trigger: TCCTACTGCAGCCTGTTGCCAAGGAGCTCCCCACAG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGGCAGAGGTGCGTCCTaGGCAGAGACCATGCAAGGT +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCGRGAS*AETMQG
Trigger: ACCTTGCATGGTCTCTGCCCAGGACGCACCTCTGCC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCGAAGTTCTCACATTCTaGGCTCTGCTTGGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSEVLTF*ALLGSQ
Trigger: CTGGCTTCCAAGCAGAGCCCAGAATGTGAGAACTTC...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAACCGAGGACGCTCCTTaGGCTGTGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKTEDAP*AVRACF
Trigger: GAAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTGGTTCAGACCTTACTTaGATACACTCTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAGSDLT*IHSFSL
Trigger: AAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACC...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CGGGCCAGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCAGGTTCAGACCTTACTTaGATACACTCTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: RASSSPDLHWQELLHMASGSDLT*IHSFSL
Trigger: AAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACC...TGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCTGGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTGGCCCCTTCTGAGTaGTCAGTGACAATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSVAPSE*SVTIKR
Trigger: CCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTAGACTGAAACTCCGGTaGTTCATTTCTGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIRLKLR*FISASL
Trigger: CAGCGATGCAGAAATGAACCACCGGAGTTTCAGTCT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTAGCACAGCTTCTGCCTaGCCTGGGTGCGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSASTASA*PGCEAD
Trigger: GTCAGCCTCGCACCCAGGCCAGGCAGAAGCTGTGCT...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATAAGGTAGGTCAGAGGTaGCGAGTTTCTTCATTCTCA +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNKVGQR*RVSSFS
Trigger: TGAGAATGAAGAAACTCGCCACCTCTGACCTACCTT...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCCAAATCGTTTTGAGTaGGGTCTGGGCAGATGTGAA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIPNRFE*GLGRCE
Trigger: TTCACATCTGCCCAGACCCCACTCAAAACGATTTGG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGGAAATCTGGGGGCTCTaGATAGGAACTCCATCTTTC +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQEIWGL*IGTPSF
Trigger: GAAAGATGGAGTTCCTATCCAGAGCCCCCAGATTTC...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAATCGTTCTGCAGTGTCTaGGGTCACCTCACAGCCACC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKSFCSV*GHLTAT
Trigger: GGTGGCTGTGAGGTGACCCCAGACACTGCAGAACGA...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGGAAGGTGACGTGCCACTCTCCTTGGGTAATCCCTAGGGTCATTTCGCTGCAAATACTCAAGGCTGGGTaGACTCTACAGGGCAATGGT +
Preference number: 4 (lower is better)
Translates to: RKVTCHSPWVIPRVISLQILKAG*TLQGNG
Trigger: ACCATTGCCCTGTAGAGTCCACCCAGCCTTGAGTAT...TTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCCAATGTATCAGAACTaGCCTTCCGAGTACTTGTAC +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTPMYQN*PSEYLY
Trigger: GTACAAGTACTCGGAAGGTCAGTTCTGATACATTGG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGGAAGGTGACGTGCCACTCTCCTTGGGTAATCCCTAGGGTCATTTCGCTGCAAAAGTTCAAAGCCTGCTaGTTTCCAGCACTGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RKVTCHSPWVIPRVISLQKFKAC*FPALVA
Trigger: AGCAACCAGTGCTGGAAATCAGCAGGCTTTGAACTT...TTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGAAGAAGAAAGTCGCTaGGGGTCCGTGGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAEEESR*GSVGSG
Trigger: ACCGGAGCCCACGGACCCTCAGCGACTTTCTTCTTC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCACAGGCTTACTTGTaGCGTGCACGTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPQAYL*RARQRL
Trigger: GAGCCTCTGACGTGCACGTCACAAGTAAGCCTGTGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAATCACCACAGAATTCTaGTCTACTGGAGCATCAGCA +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPITTEF*STGASA
Trigger: TGCTGATGCTCCAGTAGATCAGAATTCTGTGGTGAT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAATTACAGGGTCAGAGGTaGCTGTATGAGCCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQLQGQR*LYEPVG
Trigger: ACCCACAGGCTCATACAGTCACCTCTGACCCTGTAA...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTCATCCTTGGTTACTaGTTCACTGCCTGGACTGTT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSVILGY*FTAWTV
Trigger: AACAGTCCAGGCAGTGAATCAGTAACCAAGGATGAC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGAGCTGCAGAGCTTTCTaGAACCACCAGAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSESCRAF*NHQKFS
Trigger: GGAAAACTTCTGGTGGTTTCAGAAAGCTCTGCAGCT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATTCCTGCAAAGTTCCTaGAGAGAGAGCATTTTCCTT +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAFLQSS*RESIFL
Trigger: AAGGAAAATGCTCTCTCTTCAGGAACTTTGCAGGAA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTGGTGAATTACTTAGCTaGAGTGCTTTGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTGELLS*SALSLA
Trigger: TGCCAAGGACAAAGCACTTCAGCTAAGTAATTCACC...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCAAGGCTTCCTGCCTTaGCTCTGTGGCCAGACTTGC +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLQGFLP*LCGQTC
Trigger: GCAAGTCTGGCCACAGAGTCAAGGCAGGAAGCCTTG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGTCTTGGGTGTTGTGTaGTATATTCTCTCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRVLGVV*YILSSG
Trigger: CCCAGAAGAGAGAATATATCACACAACACCCAAGAC...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGCTCCTTTCCCTGCCTaGAGGCGGGGCTCGCATGAC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLAPFPA*RRGSHD
Trigger: GTCATGCGAGCCCCGCCTTCAGGCAGGGAAAGGAGC...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCAGGGCTGGACAGTaGCATGTGACAGGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTLRAGQ*HVTGLP
Trigger: GGGGAGGCCTGTCACATGTCACTGTCCAGCCCTGAG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCATTCTCACCTGAAAACTaGTTTACAAGCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: EAVAPSEWSVTIKRCHAAFSPEN*FTSTSP
Trigger: AGGGGATGTGCTTGTAAATCAGTTTTCAGGTGAGAA...TGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGCCACTCACCAAACCCTaGAGGATCTCCACCTCATTT +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWPLTKP*RISTSF
Trigger: AAATGAGGTGGAGATCCTTCAGGGTTTGGTGAGTGG...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTCTTCTCGCCTCCTTTTaGAGCATTCATCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLLASF*SIHLMA
Trigger: AGCCATCAGATGAATGCTTCAAAAGGAGGCGAGAAG...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATCTGTTTCTGAAGGGTaGGTATTCTCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQSVSEG*VFSMTE
Trigger: TTCTGTCATGGAGAATACTCACCCTTCAGAAACAGA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLFHRIN*SRSLVL
Trigger: GAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp GGACTGGACGCTGAGGAGCAGTGGGCGTCCAGTGTAAGAGACTTGTGCACGCGGATAAGACTGTCCATCTaGTTGAGGTTTGTTTTCATT +
Preference number: 4 (lower is better)
Translates to: GLDAEEQWASSVRDLCTRIRLSI*LRFVFI
Trigger: AATGAAAACAAACCTCAAGCAGATGGACAGTCTTAT...CCGCGTGCACAAGTCTCTTACACTGGACGCCCACTGCTCCTCAGCGTCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGAGAGTCCACAATAGGTaGTGGCTCCACCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWRVHNR*WLHLFP
Trigger: GGGGAAGAGGTGGAGCCAGCACCTATTGTGGACTCT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGGAGCTGTTGTGCTCTaGCCCCAAGGCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYGAVVL*PQGFLP
Trigger: AGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCC...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCCCTCAGTAAGCAGTaGTCCAGCGGCCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPLSKQ*SSGLDL
Trigger: CAAGTCAAGGCCGCTGGAGCACTGCTTACTGAGGGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAGCCAGAAGAGATGCTaGATCAGGGCATGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCSQKRC*IRAWLY
Trigger: ATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATGTGCTAGATCTTCCTaGTCCACTTCATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQCARSS*STSLSL
Trigger: CAAAGACAATGAAGTGGAGCAGGAAGATCTAGCACA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCATAACTTGCCACTTTaGTGTCTACAGCTCCAATCA +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCHNLPL*CLQLQS
Trigger: TGATTGGAGCTGTAGACAGCAAAGTGGCAAGTTATG...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGACCTTTCTCCTCATGTaGCACTTCTCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLTFLLM*HFSHNQ
Trigger: CTGATTGTGAGAGAAGTGGCACATGAGGAGAAAGGT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCCTCTGGGAGAGGGGTaGTGCACTCAGCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPPLGEG*CTQPCP
Trigger: GGGACATGGCTGAGTGCAGCACCCCTCTCCCAGAGG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGCCTCTGGGAGAGGGGTaGTGCACTCAGCCATGTCCC +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQPLGEG*CTQPCP
Trigger: GGGACATGGCTGAGTGCAGCACCCCTCTCCCAGAGG...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCAGTCGGCCCAAGTGTaGCTCCCAGATTTCCACTCA +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCQSAQV*LPDFHS
Trigger: TGAGTGGAAATCTGGGAGGCACACTTGGGCCGACTG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTCCTCCAAAGGTCTCTaGTCTCCGGGGCAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCSSKGL*SPGQGN
Trigger: GTTTCCCTGCCCCGGAGAGCAGAGACCTTTGGAGGA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTGGGCCTGCTGCTTCTaGAGGTTGGCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNWACCF*RLARSW
Trigger: CCAGGACCTGGCCAACCTGCAGAAGCAGCAGGCCCA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGAGGTACTGGGCCTGCTaGTTCTGCAGGTTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRRYWAC*FCRLAR
Trigger: CCTGGCCAACCTGCAGAAGCAGCAGGCCCAGTACCT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGACTCACGCTCGCGCCTaGGCTTCTCCTCGAGGTACT +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYETHARA*ASPRGT
Trigger: AGTACCTCGAGGAGAAGCGCAGGCGCGAGCGTGAGT...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGAGTGTAAGAGACTTGTaGACGCGGGGACAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWSVRDL*TRGQQE
Trigger: CTCCTGCTGTCCCCGCGTGCACAAGTCTCTTACACT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTCAGAGCACAGCTTCTaGCTGGCCTGGGTGCGAGGC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNSEHSF*LAWVRG
Trigger: GCCTCGCACCCAGGCCAGGCAGAAGCTGTGCTCTGA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AACTCGGAGCCAGTGCCCAGAACAGACAGCCAAGCCCCGGGTAGATCTCAGGAAATAAATATCTCCATCTaGAAGGCCAGCTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: NSEPVPRTDSQAPGRSQEINISI*KASLQF
Trigger: GAATTGCAAGCTGGCCTTGCAGATGGAGATATTTAT...TTCCTGAGATCTACCCGGGGCTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCCTGAGGCGGGTGGATTaGCTGAGCTCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPLRRVD*LSSGVQ
Trigger: TTGAACTCCTGAGCTCAGGCAATCCACCCGCCTCAG...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTACAGTGACGGAGGGTaGAACCCAAAAATACCAAGT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLYSDGG*NPKIPS
Trigger: ACTTGGTATTTTTGGGTTCCACCCTCCGTCACTGTA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGCCCCTTCCTGGTTGTaGATACTGAGAGCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAAPSWL*ILRAPR
Trigger: CCGCGGAGCTCTCAGTATCCACAACCAGGAAGGGGC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAGGCGTCGCCCCTTCCTaGTTGTGGATACTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTGVAPS*LWILRA
Trigger: AGCTCTCAGTATCCACAACCAGGAAGGGGCGACGCC...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCTGCTCAGGGACTCCTaGTCTGTGGGCATTCCAGAA +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCLLRDS*SVGIPE
Trigger: TTCTGGAATGCCCACAGACCAGGAGTCCCTGAGCAG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTCCCCTGCAGTGTCTaGGGTACTGACATTTGTTGT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSFPCSV*GTDICC
Trigger: ACAACAAATGTCAGTACCCCAGACACTGCAGGGGAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCAGAATTCTGATCTACTaGAGCATCAGCACTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFRILIY*SISTLL
Trigger: GAGGAGAGTGCTGATGCTCCAGTAGATCAGAATTCT...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCTCAGCGTCACCCATaGTACAGCTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPQRHP*YSCGLL
Trigger: GAGCAGACCACAGCTGTACCATGGGTGACGCTGAGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAGACCCAACTCAGGGCTaGACAGTGACATGTGACAGG +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKDPTQG*TVTCDR
Trigger: CCTGTCACATGTCACTGTCCAGCCCTGAGTTGGGTC...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGCTGCAAGGCTCCCCGTaGCTTCCTCAGGAGTACTGC +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYELQGSP*LPQEYC
Trigger: GCAGTACTCCTGAGGAAGCCACGGGGAGCCTTGCAG...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCCTCTTCCTCTGGCTTTaGGAAGATGATGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSLFLWL*EDDAVH
Trigger: ATGGACAGCATCATCTTCCCAAAGCCAGAGGAAGAG...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTATCCTATGTTCTCTCTaGTCTGACTCCAGATCCTCT +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIILCSL*SDSRSS
Trigger: AGAGGATCTGGAGTCAGACCAGAGAGAACATAGGAT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGCTTGGAGGGGCTATGTaGCAGGAAATTATAGTTCTC +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRLGGAM*QEIIVL
Trigger: GAGAACTATAATTTCCTGCCACATAGCCCCTCCAAG...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAAGCGAGACACTCTGCTaGGATCGTCTATTGGCAAAT +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGISETLC*DRLLAN
Trigger: ATTTGCCAATAGACGATCCCAGCAGAGTGTCTCGCT...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTAAGCAATATGCACTCTaGAATTCCAAGCCTTCTAAC +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDAKQYAL*NSKPSN
Trigger: GTTAGAAGGCTTGGAATTCCAGAGTGCATATTGCTT...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTCTAGGGCTATGTGTTaGGGAGCAATCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEASRAMC*GAILWE
Trigger: CTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTAGGTTGGCCAGGTCCTaGCGCTGCTTCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGIRLARS*RCFSRL
Trigger: CAGCCTGGAGAAGCAGCGCCAGGACCTGGCCAACCT...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGCATCAGCTTGGTATGTaGATGGGAAACCTGACACAG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEHQLGM*MGNLTQ
Trigger: CTGTGTCAGGTTTCCCATCCACATACCAAGCTGATG...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAGGCAGTCACAAATCATaGCCGAAGCAGAGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKGSHKS*PKQSLG
Trigger: GCCCAGACTCTGCTTCGGCCATGATTTGTGACTGCC...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAACAGCCAGGAGGCCGTaGCCCCTTCTGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTTARRP*PLLSGQ
Trigger: CTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGT...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GAGCATTTAAAGTGCACATGTCACCTAACGACAACGACTGAGATGACTGGAATTACAGCCAGGAGGCCGTaGCCCCTTCTGAGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: EHLKCTCHLTTTTEMTGITARRP*PLLSGQ
Trigger: CTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGT...AATTCCAGTCATCTCAGTCGTTGTCGTTAGGTGACATGTGCACTTTAAATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTATGCGAGGCTGACCCCTaGCAGTGGTGTGCCCTCACC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLCEADP*QWCALT
Trigger: GGTGAGGGCACACCACTGCCAGGGGTCAGCCTCGCA...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAATGAAACATCACAGCTaGGCGGGGAGTAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTMKHHS*AGSKRP
Trigger: GGGTCTCTTACTCCCCGCCCAGCTGTGATGTTTCAT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTTGCAGACTGTATTCCTaGATGAAGTTGGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGICRLYS*MKLGGL
Trigger: CAAACCACCCAACTTCATCCAGGAATACAGTCTGCA...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAAGGCCGGGGAAGGTGTaGGGGGTGAGTGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLRPGKV*GVSASC
Trigger: GCAGGAAGCACTCACCCCCCACACCTTCCCCGGCCT...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGGAAATGGGTGTTCATaGTGTGAATCAGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIGNGCS*CESDSE
Trigger: CTCTGAGTCTGATTCACATCATGAACACCCATTTCC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGAAATGGGTGTTCATaGTGTGAATCAGACTCAGAG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEGNGCS*CESDSE
Trigger: CTCTGAGTCTGATTCACATCATGAACACCCATTTCC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCCTCCTCACGACTTCGTaGAGTTTCCGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALLTTS*SFRFCC
Trigger: ACAGCAGAAACGGAAACTTCACGAAGTCGTGAGGAG...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTATCGGGTGGATCTTGTaGGCTGGGTTGCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFIGWIL*AGLPCC
Trigger: ACAGCAAGGCAACCCAGCTCACAAGATCCACCCGAT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACCATCCCAGGTAAATCCCCAGGACAGGAACAAATCCCCCTGAGGACAACTTCCAGAGAAAGTACTGTCTaGTATTACTGCCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TIPGKSPGQEQIPLRTTSRESTV*YYCLVW
Trigger: CCAGACCAGGCAGTAATATCAGACAGTACTTTCTCT...GGAAGTTGTCCTCAGGGGGATTTGTTCCTGTCCTGGGGATTTACCTGGGATGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTTCCCCATCCCGTGCTaGAGCTCTGCAGCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNFPIPC*SSAAVE
Trigger: CTCCACTGCTGCAGAGCTTCAGCACGGGATGGGGAA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTACCTTGAGTCAGCAGTaGGACTTGTGGGGCCACTTC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCTLSQQ*DLWGHF
Trigger: GAAGTGGCCCCACAAGTCTCACTGCTGACTCAAGGT...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGACACATCACTGCCATaGGAAGAATGTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEADTSLP*EECRSS
Trigger: ACTGGACCGACATTCTTCTCATGGCAGTGATGTGTC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATTCTGCATTCTCACCTaGAAACTGATTTACAAGCAC +
Preference number: 4 (lower is better)
Translates to: SQIMAEAESGPPSPPDTQFCILT*KLIYKH
Trigger: GTGCTTGTAAATCAGTTTTCAGGTGAGAATGCAGAA...TTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTTGGCATAAAGGTCTTTaGAGTAGTTTACAGACTGGT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCWHKGL*SSLQTG
Trigger: ACCAGTCTGTAAACTACTTCAAAGACCTTTATGCCA...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CACAAATCATGGCCGAAGCAGAGTCTGGGCCTCCTTCCCCACCCGACACTCAATAAGCCTTCTAACAACTaGACTGCTCATCTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HKSWPKQSLGLLPHPTLNKPSNN*TAHLLL
Trigger: AAGAAGAAGATGAGCAGTTCAGTTGTTAGAAGGCTT...ATTGAGTGTCGGGTGGGGAAGGAGGCCCAGACTCTGCTTCGGCCATGATTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTACTTGGTAATCCGCTaGGTTACAAGCAATATGCAC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLYLVIR*VTSNMH
Trigger: GTGCATATTGCTTGTAACTCAGCGGATTACCAAGTA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTCACTCTTCATCCTCATaGTTGACTTGCTATCTGTCT +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIHSSSS*LTCYLS
Trigger: AGACAGATAGCAAGTCAATCATGAGGATGAAGAGTG...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGTGAGAAGAACTGCTTaGACCTCTTTCAACCTTCCT +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIVRRTA*TSFNLP
Trigger: AGGAAGGTTGAAAGAGGTTCAAGCAGTTCTTCTCAC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAACCACTCACCAAACCCTaGAGGATCTCCACCTCATTT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQPLTKP*RISTSF
Trigger: AAATGAGGTGGAGATCCTTCAGGGTTTGGTGAGTGG...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTTTGAAGCATTCATCTaGTGGCTGTCAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLFEAFI*WLSNPP
Trigger: TGGAGGATTTGACAGCCATCAGATGAATGCTTCAAA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCACCCTGCAGAGCGCTaGGGAGCTCGTAGAGATGAA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAHPAER*GARRDE
Trigger: TTCATCTCTACGAGCTCCTCAGCGCTCTGCAGGGTG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTGTGGATGGGAAACCTaGCACAGGTCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCCGWET*HRSRSV
Trigger: GACAGAACGGGACCTGTGTCAGGTTTCCCATCCACA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGTTTGTCTGGCTGGTTaGACTCAGTATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEVCLAG*TQYVKR
Trigger: CCTTTTCACATACTGAGTTCAACCAGCCAGACAAAC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGCCCTTGTGCTAAGTTaGCCAGACGCCTGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAALVLS*PDAWCR
Trigger: TCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCACTTCACTCGGTATTaGCTGGATAGTTTAGACTGT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHFTRY*LDSLDC
Trigger: ACAGTCTAAACTATCCAGTCAATACCGAGTGAAGTG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATAGTGATTTCTTTAGCTTaGTGGAGAACATGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIVISLA*WRTWCP
Trigger: GGGACACCATGTTCTCCATCAAGCTAAAGAAATCAC...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTAATGAAGCCAACCGATaGGAGCATTTAAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGINEANR*EHLKCT
Trigger: TGTGCACTTTAAATGCTCTCATCGGTTGGCTTCATT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCCTCTTCTTTGTCTCTaGGGATGGACGAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGPLLCL*GWTRAT
Trigger: CGTCGCTCTCGTCCATCCTCAGAGACAAAGAAGAGG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCTCTTCTTTGTCTCTaGGGATGGACGAGAGCGACG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPLLCL*GWTRAT
Trigger: CGTCGCTCTCGTCCATCCTCAGAGACAAAGAAGAGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCATGCCCTCAGGTGGTaGCGAAAGGTAGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYHALRW*RKVGEA
Trigger: AGCTTCCCCTACCTTTCGTCACCACCTGAGGGCATG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCATGCCCTCAGGTGGTaGCGAAAGGTAGGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAHALRW*RKVGEA
Trigger: AGCTTCCCCTACCTTTCGTCACCACCTGAGGGCATG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGGGACTTTCAGTCTGTaGAACAGGGCTCCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAGTFSL*NRAPWA
Trigger: TGCCCAGGGAGCCCTGTTGCACAGACTGAAAGTCCC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGTGGTTACTGATTCACTaGCTGGACTGTTTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWWLLIH*LDCLPE
Trigger: CTCTGGCAAACAGTCCAGGCAGTGAATCAGTAACCA...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATATCTCCATCTGCAAGGCCAGCTTGCAATTCATCAATAAGCACCAAGTTACAGGGAGCTGTTGTGCTCTaGCCCCAAGGCTTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ISPSARPACNSSISTKLQGAVVL*PQGFLP
Trigger: AGGCAGGAAGCCTTGGGGGCAGAGCACAACAGCTCC...CTGTAACTTGGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGATGGAGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCCTGGGCAGAGACCATaGAAGGTAGAGAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYPGQRP*KVEREC
Trigger: GCACTCCCTCTCTACCTTGCATGGTCTCTGCCCAGG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCTGGGTCATTGGGCCTTaGTTCATCTTCAGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVWVIGP*FIFSVA
Trigger: TGCTACACTGAAGATGAAGCAAGGCCCAATGACCCA...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGATGGAACTGAAAGTGTaGCCGTTGACAGTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRMELKV*PLTVFL
Trigger: TAAGAAGACTGTCAACGGGCACACTTTCAGTTCCAT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCCGACTCCAAGACTCTaGTTCCAGCTGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWPTPRL*FQLFGL
Trigger: GAGTCCAAACAGCTGGAAGCAGAGTCTTGGAGTCGG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TCCAGGCACTGCCCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCATATATTACTTCTTaGCGTTTGACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: SRHCPCAKLTRRLVQTGPSYITS*RLTTSF
Trigger: GAAAGATGTGGTCAAACGGCAAGAAGTAATATATGA...AGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGGGCAGTGCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAAGCTTTTCTACCATCTaGTGCTCAAAAAGCAGATCC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPSFSTI*CSKSRS
Trigger: GGATCTGCTTTTTGAGCAGCAGATGGTAGAAAAGCT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGTGTGCTAGATCTTCCTaGTCCACTTCATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQCARSS*STSLSL
Trigger: CAAAGACAATGAAGTGGAGCAGGAAGATCTAGCACA...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGTCAGTGAGAAGAACTaGTTGAACCTCTTTCAACCT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLVSEKN*LNLFQP
Trigger: AGGTTGAAAGAGGTTCAAGCAGTTCTTCTCACTGAC...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGCTGCTTCTCCAGGCTaGGCTGCTTCTCCTGCTCAA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAAASPG*AASPAQ
Trigger: TTGAGCAGGAGAAGCAGCGCAGCCTGGAGAAGCAGC...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGGTTCTGTTGCTGCACTaGAGACTGTATTCCTGGATG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRVLLLH*RLYSWM
Trigger: CATCCAGGAATACAGTCTGCAGTGCAGCAACAGAAC...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGTAAGCGGTTCTGTTaGTGCACTGCAGACTGTATT +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWGKRFC*CTADCI
Trigger: AATACAGTCTGCAGTGCAGCAACAGAACCGCTTACC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGCCAAAACGCAGAGGGTaGACATCGTTCTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWPKRRG*TSFCSV
Trigger: GACACTGCAGAACGATGTGCACCCTCTGCGTTTTGG...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTGCAACAGGGCTCCCTaGGCAGCACTGAGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNCNRAP*AALSAL
Trigger: GAGAGCACTCAGTGCTGCCCAGGGAGCCCTGTTGCA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTTCAGCTTTCACGTCTaGCATTTCTGCTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEAFSFHV*HFCCWL
Trigger: GAGCCAGCAGCAGAAATGCCAGACGTGAAAGCTGAA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTTCCTCACCACTGAATaGGTGTCTGAGCTCTTCGGC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCFLTTE*VSELFG
Trigger: GCCGAAGAGCTCAGACACCCATTCAGTGGTGAGGAA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTTCCGCCATCATCCCCTaGCTGTACACACCACTCATG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFSAIIP*LYTPLM
Trigger: CATGAGTGGTGTGTACAGCCAGGGGATGATGGCGGA...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGTGGAAGAATTGGCTATaGATACTGATCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLWKNWL*ILISSS
Trigger: GGATGAGCTGATCAGTATCCATAGCCAATTCTTCCA...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAATCCTCTGGAAGAATTaGCTATGGATACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPILWKN*LWILIS
Trigger: GCTGATCAGTATCCATAGCCAATTCTTCCAGAGGAT...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CCTTGTGCTAAGTTGACCAGACGCCTGGTGCAGACTGGGCCTTCTTCTGGCATTATCCTCTGGAAGAATTaGCTATGGATACTGATCAGC +
Preference number: 4 (lower is better)
Translates to: PCAKLTRRLVQTGPSSGIILWKN*LWILIS
Trigger: GCTGATCAGTATCCATAGCCAATTCTTCCAGAGGAT...AATGCCAGAAGAAGGCCCAGTCTGCACCAGGCGTCTGGTCAACTTAGCACAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTGTTCCTCTTTGGAGCTaGCATGGACTTCTACCATCT +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCVPLWS*HGLLPS
Trigger: AGATGGTAGAAGTCCATGCCAGCTCCAAAGAGGAAC...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTCTAGGGCTATGTGTTaGGGAGCAATCCTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCSRAMC*GAILWE
Trigger: CTCCCAGAGGATTGCTCCCCAACACATAGCCCTAGA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGGTCCTTTGTTTGTCTaGCTGGTTGAACTCAGTATG +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEGPLFV*LVELSM
Trigger: CATACTGAGTTCAACCAGCCAGACAAACAAAGGACC...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCTTATTGTCCAGGACCTaGGGCCGCCCAGGAGGACTG +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPLLSRT*GRPGGL
Trigger: CAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAA...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEADWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCATGCAAAACACGGGTaGTATGTGCCCGGGATGGGT +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGHAKHG*YVPGMG
Trigger: ACCCATCCCGGGCACATACCACCCGTGTTTTGCATG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATATCCACTGTTAACTTaGGGACCAGTGCAAGTCCTT +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGIYPLLT*GPVQVL
Trigger: AAGGACTTGCACTGGTCCCCAAGTTAACAGTGGATA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACAGTCCTGTCCACCTTaGAGATGTCACAGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTQSCPP*RCHRGC
Trigger: ACAGCCTCTGTGACATCTCCAAGGTGGACAGGACTG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394510.6
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATAGTTTAGACTGTTaGGCTAGACCTGGCTCACCC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTDSLDC*ARPGSP
Trigger: GGGTGAGCCAGGTCTAGCCCAACAGTCTAAACTATC...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACGAGTACTTGTACAGTaGCGGAGGGTGGAACCCAAA +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTRVLVQ*RRVEPK
Trigger: TTTGGGTTCCACCCTCCGTCACTGTACAAGTACTCG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAACCCAGATGGGGGTCCTaGCTGGTCAAGAAAACGGGT +
Preference number: 4 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQPRWGS*LVKKTG
Trigger: ACCCGTTTTCTTGACCAGTCAGGACCCCCATCTGGG...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGATGACCAAGTCTCTCTaGAGCACAGCATCTCCACTG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWMTKSL*STASPL
Trigger: CAGTGGAGATGCTGTGCTTCAGAGAGACTTGGTCAT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTTGGCATCTGGGTTCATaGGCCCATGTTCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFWHLGS*AHVPFP
Trigger: GGGAAATGGAACATGGGCTCATGAACCCAGATGCCA...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACCACAGGCTTACTTGTaGCGTGCACGTCAGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTPQAYL*RARQRL
Trigger: GAGCCTCTGACGTGCACGTCACAAGTAAGCCTGTGG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACACTCCTCACGACTTCGTaGAGTTTCCGTTTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTLLTTS*SFRFCC
Trigger: ACAGCAGAAACGGAAACTTCACGAAGTCGTGAGGAG...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTCAGAGGTGACTGTATaGGCCTGTGGGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGSEVTV*ACGSSQ
Trigger: CTGTGAAGACCCACAGGCTCATACAGTCACCTCTGA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACCCATCATCATGGGCTaGGAGCTCCATGTCTGTGGG +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTPIIMG*ELHVCG
Trigger: CCCACAGACATGGAGCTCTCAGCCCATGATGATGGG...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCGTGTCATCGGTGGATaGACTGGATCCGGTGATATC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGRVIGG*TGSGDI
Trigger: GATATCACCGGATCCAGTTCATCCACCGATGACACG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACAGAATGTCGGTCCAGTaGAGCCGTGTCATCGGTGGA +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYRMSVQ*SRVIGG
Trigger: TCCACCGATGACACGGCTTCACTGGACCGACATTCT...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGCCAATCCAGGATGGCTaGTTGTCATTAATGAGATGG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRPIQDG*LSLMRW
Trigger: CCATCTCATTAATGACAATCAGCCATCCTGGATTGG...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTACACTGGCTACAGCTaGTGGGACCCACAACAGGAA +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGYTGYS*WDPQQE
Trigger: TTCCTGTTGTGGGTCCCATCAGCTGTAGCCAGTGTA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAAAGGCATCTTTGTTGGTaGAGGGCTTCATACACTGGC +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKRHLCW*RASYTG
Trigger: GCCAGTGTATGAAGCCCTTCACCAACAAAGATGCCT...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTCTCACCTGAAAACTaGTTTACAAGCACATCCCCT +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSFSPEN*FTSTSP
Trigger: AGGGGATGTGCTTGTAAATCAGTTTTCAGGTGAGAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCTGGCATAAAGGTCTTTaGAGTAGTTTACAGACTGGT +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFWHKGL*SSLQTG
Trigger: ACCAGTCTGTAAACTACTTCAAAGACCTTTATGCCA...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGGTTTGTCTGGCTGGTTaGACTCAGTATGTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRVCLAG*TQYVKR
Trigger: CCTTTTCACATACTGAGTTCAACCAGCCAGACAAAC...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCTGAGGAGTACTGGGTaGACTGCTGATATGCGGGGG +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRLRSTG*TADMRG
Trigger: CCCCCGCATATCAGCAGTTCACCCAGTACTCCTCAG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAGGGAAACCAGTCTCTaGGGAGTACTGGGTGAACTG +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFRETSL*GVLGEL
Trigger: CAGTTCACCCAGTACTCCTCAGAGACTGGTTTCCCT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTSKDTE*TVLAAT
Trigger: AGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGA...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCCCTTTGGTCTGTTTCTaGAGGGTGAGTATTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVPLVCF*RVSILH
Trigger: ATGGAGAATACTCACCCTTCAGAAACAGACCAAAGG...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCAGCCACCCTCTTTGTaGCCACTTGAAGCCCATTCA +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLQPPSL*PLEAHS
Trigger: TGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCTG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCCTAGACGGTCCTGCTaGAGGAAGGCAAGGCACACA +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRPRRSC*RKARHT
Trigger: TGTGTGCCTTGCCTTCCTTCAGCAGGACCGTCTAGG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAAGACCCACAGGAAGGTaGCGTGCCACTCTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSRPTGR*RATLLG
Trigger: CCCAAGGAGAGTGGCACGTCACCTTCCTGTGGGTCT...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTTCATAGGATAAACTaGTCCAGGAGTCTGGTTCTC +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSFHRIN*SRSLVL
Trigger: GAGAACCAGACTCCTGGAGCAGTTTATCCTATGAAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCTGGGCAGCACTGAGTaGTCTCAGTCTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGLGSTE*SQSLQK
Trigger: CTTCTGAAGAGACTGAGAGCACTCAGTGCTGCCCAG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCATGTTCCATTTCCCCTaGAGTGTCTGGGGTACTGAC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCMFHFP*SVWGTD
Trigger: GTCAGTACCCCAGACACTGCAGGGGAAATGGAACAT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATCTTGTGAGCTGGGTTaGCTTGCTGTGGTGCTTTCG +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTSCELG*LAVVLS
Trigger: CGAAAGCACCACAGCAAGGCAACCCAGCTCACAAGA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTCCTTGGCAACAGGCTaGAGTAGGACAGGATGTGCT +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCSLATG*SRTGCA
Trigger: AGCACATCCTGTCCTACTGCAGCCTGTTGCCAAGGA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCCCCTCAGTAAGCAGTaGTCCAGCGGCCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRPLSKQ*SSGLDL
Trigger: CAAGTCAAGGCCGCTGGAGCACTGCTTACTGAGGGG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGGAAGCCAGAAGAGATaGTGCATCAGGGCATGGCTC +
Preference number: 4 (lower is better)
Translates to: FQPLGIPDVSKTITCTYEGSQKR*CIRAWL
Trigger: GAGCCATGCCCTGATGCAGCATCTCTTCTGGCTTCC...CTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTTCTGCATCGCTGGCTaGATTTTTCCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAFCIAG*IFPRPP
Trigger: TGGGGGCCTGGGAAAAATGCAGCCAGCGATGCAGAA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTTCTGCATCGCTGGCTaGATTTTTCCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRFCIAG*IFPRPP
Trigger: TGGGGGCCTGGGAAAAATGCAGCCAGCGATGCAGAA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACTTCTGCATCGCTGGCTaGATTTTTCCCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYFCIAG*IFPRPP
Trigger: TGGGGGCCTGGGAAAAATGCAGCCAGCGATGCAGAA...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTCCGACTCCAAGACTCTaGTTCCAGCTGTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFPTPRL*FQLFGL
Trigger: GAGTCCAAACAGCTGGAAGCAGAGTCTTGGAGTCGG...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGCTGTTTTAGAAACTTaGTGTCTATTATCCGACTCC +
Preference number: 4 (lower is better)
Translates to: HPTLNIICCLLSRTWGRPAVLET*CLLSDS
Trigger: GGAGTCGGATAATAGACAGCAAGTTTCTAAAACAGC...TGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGGCTGTTTTAGAAACTTaGTGTCTATTATCCGACTCC +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQAVLET*CLLSDS
Trigger: GGAGTCGGATAATAGACAGCAAGTTTCTAAAACAGC...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGACAGACTGGTTATGTTaGCCACAAAACTTGCCATAT +
Preference number: 4 (lower is better)
Translates to: KHGWYVPGMGLEGNQSLRTDWLC*PQNLPY
Trigger: ATATGGCAAGTTTTGTGGGCAACATAACCAGTCTGT...CCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGACCTTTCTCCTCATGTaGCACTTCTCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRTFLLM*HFSHNQ
Trigger: CTGATTGTGAGAGAAGTGGCACATGAGGAGAAAGGT...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGGACCGACCACATCTTaGTCAATGGGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIGPTTS*SMGLLT
Trigger: TGTCAGCAGCCCCATTGAGCAAGATGTGGTCGGTCC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTTCTGCAAGGCCAGCTTaGAATTCATCAATAAGCACC +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCSARPA*NSSIST
Trigger: GGTGCTTATTGATGAATTGCAAGCTGGCCTTGCAGA...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCGGAACTCGGAGCCAGTaGCCAGAACAGACAGCCAAG +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPGTRSQ*PEQTAK
Trigger: CTTGGCTGTCTGTTCTGGGCACTGGCTCCGAGTTCC...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTTCAGTACTGCCCTCCTaGAAATCCCAGGAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSASVLPS*KSQEGN
Trigger: GTTCCCCTCCTGGGATTTGCAGGAGGGCAGTACTGA...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCGGGTGCACATCGTTCTaGAGTGTCTGGGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPGCTSF*SVWGHL
Trigger: GAGGTGACCCCAGACACTGCAGAACGATGTGCACCC...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGCATCCATAGGTGGCTaGGCACCTAGACGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: IKGIRRFRPYLDTLFQPLASIGG*APRRSC
Trigger: GCAGGACCGTCTAGGTGCGCAGCCACCTATGGATGC...TAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGCATAAGTTTAAAAATTaGTCCAGTGCAACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLHKFKN*SSATVS
Trigger: GGAGACGGTTGCACTGGACCAATTTTTAAACTTATG...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGGAGTACTCATAAGTTTAAAAATTaGTCCAGTGCAACCGTCTCC +
Preference number: 4 (lower is better)
Translates to: GWYVPGMGLEGNQSLRSTHKFKN*SSATVS
Trigger: GGAGACGGTTGCACTGGACCAATTTTTAAACTTATG...AGTACTCCTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTATACTGGGCTGTGCCTaGCTCCATGACCAAGTCTCT +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGILGCA*LHDQVS
Trigger: AGAGACTTGGTCATGGAGCCAGGCACAGCCCAGTAT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGGACTGTATGAGCCTGTaGGTCTTCACAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRDCMSL*VFTVGG
Trigger: GCCTCCCACTGTGAAGACCCACAGGCTCATACAGTC...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GACGTGTCCAAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCGACTGTATGAGCCTGTaGGTCTTCACAGTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: DVSKTITCTYEAITFSVIDCMSL*VFTVGG
Trigger: GCCTCCCACTGTGAAGACCCACAGGCTCATACAGTC...GATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CACAGCCAGGAGGCCGTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTATTCGAATTTCCATCTaGGCCATCTCTATAATCTGT +
Preference number: 4 (lower is better)
Translates to: HSQEAVAPSEWSVTIKRCIRISI*AISIIC
Trigger: ACAGATTATAGAGATGGCCCAGATGGAAATTCGAAT...ACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCACGGCCTCCTGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCAGCAGTGGAGGATGTaGACAGGCCTACTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNQQWRM*TGLLPC
Trigger: ACAGGGCAGTAGGCCTGTCCACATCCTCCACTGCTG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCAGCAGTGGAGGATGTaGACAGGCCTACTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRQQWRM*TGLLPC
Trigger: ACAGGGCAGTAGGCCTGTCCACATCCTCCACTGCTG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCATCTGGCAACAGACATaGCAACAGAGCGGAGCTGTT +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCIWQQT*QQSGAV
Trigger: AACAGCTCCGCTCTGTTGCCATGTCTGTTGCCAGAT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCAAGAGGTATCATCTCTaGGGTTCCAACTCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCKRYHL*GSNSLW
Trigger: CCACAGGGAGTTGGAACCCCAGAGATGATACCTCTT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCCCATGGTACAGCTGTaGTCTGCTCCCTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNPMVQL*SAPSSF
Trigger: GAAGCTGGAGGGAGCAGACCACAGCTGTACCATGGG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAACCATCACCTGTACTTACGAGGCCATTACTTTCAGTGTAATCCTGAGTAGGCCTCAGCGTCACCCATaGTACAGCTGTGGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: KTITCTYEAITFSVILSRPQRHP*YSCGLL
Trigger: GAGCAGACCACAGCTGTACCATGGGTGACGCTGAGG...CCTACTCAGGATTACACTGAAAGTAATGGCCTCGTAAGTACAGGTGATGGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAGGGGCCCCATCATCATaGGCTGAGAGCTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTGAPSS*AESSMS
Trigger: AGACATGGAGCTCTCAGCCCATGATGATGGGGCCCC...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACATGCTGCATCAGGGCATaGCTCTATTGTACACCAGTT +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTCCIRA*LYCTPV
Trigger: AACTGGTGTACAATAGAGCCATGCCCTGATGCAGCA...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACACTCTTCCTCTGGCTTTaGGAAGATGATGCTGTCCAT +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTLFLWL*EDDAVH
Trigger: ATGGACAGCATCATCTTCCCAAAGCCAGAGGAAGAG...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCATCTGTTGCTTATTGTCCAGGACCTGGGGCCGCCCAGGAGGACTGGACGCTTTGTCATTAATGAGATaGATTTTGTCAATGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IICCLLSRTWGRPGGLDALSLMR*ILSMER
Trigger: CCTCTCCATTGACAAAATCCATCTCATTAATGACAA...AGCGTCCAGTCCTCCTGGGCGGCCCCAGGTCCTGGACAATAAGCAACAGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCTCTCGGCAGCCTTTGTaGACAAAAGCACTGCAATTT +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVSRQPL*TKALQF
Trigger: AAATTGCAGTGCTTTTGTCCACAAAGGCTGCCGAGA...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACACCGAGGACGCTCCTTaGGCTGTGAGGGCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNTEDAP*AVRACF
Trigger: GAAACAAGCCCTCACAGCCCAAGGAGCGTCCTCGGT...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATATCTATTGGCAAATATTaGGGTGGTAGCGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGISIGKY*GGSGFI
Trigger: GATGAAACCGCTACCACCCCAATATTTGCCAATAGA...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGACTTCTACCATCTCTaGATCTGTCATCCCCATGCT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQDFYHL*ICHPHA
Trigger: AGCATGGGGATGACAGATCCAGAGATGGTAGAAGTC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGACTGGGGAAGAACGATaGGATCCTCATCAGCTTGGT +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWTGEER*DPHQLG
Trigger: ACCAAGCTGATGAGGATCCCATCGTTCTTCCCCAGT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGCTGGCTCTGCCCTTCTaGTCCTTTGTTTGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLLALPF*SFVCLA
Trigger: AGCCAGACAAACAAAGGACCAGAAGGGCAGAGCCAG...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGACTGGGCCTTCTTCTaGCATTCCCCGTGTGTATAT +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTDWAFF*HSPCVY
Trigger: ATATACACACGGGGAATGCCAGAAGAAGGCCCAGTC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAACTAGAGCACTGTCAAGGCCATGAGCAAAAGCACAGGCAGCCACCATCCCAGCAAGCCTTCTCTCACTaGTTTCACAAATGTTTGTCA +
Preference number: 4 (lower is better)
Translates to: QLEHCQGHEQKHRQPPSQQAFSH*FHKCLS
Trigger: TGACAAACATTTGTGAAACCAGTGAGAGAAGGCTTG...CTGGGATGGTGGCTGCCTGTGCTTTTGCTCATGGCCTTGACAGTGCTCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTCTCCAGATCTGCACTaGCAGGAACTGCTACACATG +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCSPDLH*QELLHM
Trigger: CATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: YMQTGPHVRTQIKSKTSAPAHTS*GKPQVN
Trigger: GTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGG...AGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACAATGAAACATCACAGCTaGGCGGGGAGTAAGAGACCC +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTMKHHS*AGSKRP
Trigger: GGGTCTCTTACTCCCCGCCCAGCTGTGATGTTTCAT...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCTGGATGAAGTTGGGTaGTTTGAGGGAATTCCGGGC +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGLDEVG*FEGIPG
Trigger: GCCCGGAATTCCCTCAAACCACCCAACTTCATCCAG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAATCGATTCTGGAAATCTaGGGGCTCTGGATAGGAACT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQSILEI*GLWIGT
Trigger: AGTTCCTATCCAGAGCCCCCAGATTTCCAGAATCGA...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTAGCGACGGGGCTGGCTaGGACGCATCCATAGGTGGC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCSDGAG*DASIGG
Trigger: GCCACCTATGGATGCGTCCCAGCCAGCCCCGTCGCT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCCACCCTCTTTGTGACCACTTGAAGCCCATTCACCAGGACTGTCTTTCTAAACGCATTGAACTCCGGTaGTTCATTTCTGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: SHPLCDHLKPIHQDCLSKRIELR*FISASL
Trigger: CAGCGATGCAGAAATGAACCACCGGAGTTCAATGCG...TTTAGAAAGACAGTCCTGGTGAATGGGCTTCAAGTGGTCACAAAGAGGGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTCATCCTGGACGAAATaGAAGTCTTCTTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWSSWTK*KSSSAT
Trigger: GGTGGCTGAAGAAGACTTTCATTTCGTCCAGGATGA...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCTGTGCCTGGCTCCATaGCCAAGTCTCTCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPLCLAP*PSLSEA
Trigger: TGCTTCAGAGAGACTTGGTCATGGAGCCAGGCACAG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAACTGACATTTGTTGTTaGAATGCCTCCCAGTTCACC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTTDICC*NASQFT
Trigger: GGTGAACTGGGAGGCATTTCAACAACAAATGTCAGT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGATTACTAAATGCAAGTaGAGACTCAGCAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: AKHGWYVPGMGLEGNQSLITKCK*RLSRFV
Trigger: AACAAACCTGCTGAGTCTTCACTTGCATTTAGTAAT...CAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTCAGAGGTGACTGTATaGGCCTGTGGGTCTTCACAG +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRSEVTV*ACGSSQ
Trigger: CTGTGAAGACCCACAGGCTCATACAGTCACCTCTGA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGGTGAATTACTTAGCTaGAGTGCTTTGTCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQGELLS*SALSLA
Trigger: TGCCAAGGACAAAGCACTTCAGCTAAGTAATTCACC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGTTTTTCCCTGGGATTaGGTGTTCTTCACTCCAACA +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTVFPWD*VFFTPT
Trigger: TGTTGGAGTGAAGAACACTCAATCCCAGGGAAAAAC...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCTCATCACTGGGTGAGTaGAAGAGGTCAGAATCACTC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCSSLGE*KRSESL
Trigger: GAGTGATTCTGACCTCTTTCACTCACCCAGTGATGA...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGACACATCACTGCCATaGGAAGAATGTCGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCDTSLP*EECRSS
Trigger: ACTGGACCGACATTCTTCTCATGGCAGTGATGTGTC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTGGAGAGGAAATGGCTaGTGTACAGTAATTAAATCC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEWRGNG*CTVIKS
Trigger: GGATTTAATTACTGTACATCAGCCATTTCCTCTCCA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAAGTGAGTCTGTTGAATaGGACAGGAATTTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTSESVE*DRNFQV
Trigger: CACCTGGAAATTCCTGTCTCATTCAACAGACTCACT...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp GTGGCCCCTTCTGAGTGGTCAGTGACAATCAAAAGGTGTCACGCTGCAGGGATACTTCATCCTCATGATTaGCTTGCTATCTGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: VAPSEWSVTIKRCHAAGILHPHD*LAICLC
Trigger: ACAAAGACAGATAGCAAGTCAATCATGAGGATGAAG...TATCCCTGCAGCGTGACACCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACTGTGGATGGGAAACCTaGCACAGGTCCCGTTCTGTC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNCGWET*HRSRSV
Trigger: GACAGAACGGGACCTGTGTCAGGTTTCCCATCCACA...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCCCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTGTTGCTTTAGTGCCTaGAACACCGAGATCGAGGTG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGCCFSA*NTEIEV
Trigger: CACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACA...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTTCAAAAGACACAGAGTaGACAGTGCTGGCTGCCACT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFSKDTE*TVLAAT
Trigger: AGTGGCAGCCAGCACTGTTCACTCTGTGTCTTTTGA...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CTGCACTGCAGACTGTATTCCTGGATGAAGTTGGGTGGTTTGAGGGAATTCCGGTCTGTTTCTGAAGGGTaGGTATTCTCCATGACAGAA +
Preference number: 4 (lower is better)
Translates to: LHCRLYSWMKLGGLREFRSVSEG*VFSMTE
Trigger: TTCTGTCATGGAGAATACTCACCCTTCAGAAACAGA...CCGGAATTCCCTCAAACCACCCAACTTCATCCAGGAATACAGTCTGCAGTGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTAACAACCAAAGCAGATaGAACATCACAGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGNNQSR*NITAGR
Trigger: CCGCCCAGCTGTGATGTTTCATCTGCTTTGGTTGTT...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTAGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCACGACAACGACTGAGATaGCTGGAATTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FSLMENMVSRRGNSMGNSRQRLR*LELRED
Trigger: GTCTTCTCTCAATTCCAGTCATCTCAGTCGTTGTCG...TGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCCGACAACGACTGAGATaGCTGGAATTGAGAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCRQRLR*LELRED
Trigger: GTCTTCTCTCAATTCCAGTCATCTCAGTCGTTGTCG...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp CATCACAGCTGGGCGGGGAGTAAGAGACCCTCTAACATTGATGTCAAGCTCTGTAATGAAGCCAACCGATaGGAGCATTTAAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: HHSWAGSKRPSNIDVKLCNEANR*EHLKCT
Trigger: TGTGCACTTTAAATGCTCTCATCGGTTGGCTTCATT...ACAGAGCTTGACATCAATGTTAGAGGGTCTCTTACTCCCCGCCCAGCTGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AGGAAGGTGACGTGCCACTCTCCTTGGGTAATCCCTAGGGTCATTTCGCTGCAAGAGAGAAAGAGGAAGTaGTATGTCCAAAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: RKVTCHSPWVIPRVISLQERKRK*YVQSFR
Trigger: TCTGAAACTTTGGACATATCACTTCCTCTTTCTCTC...TTGCAGCGAAATGACCCTAGGGATTACCCAAGGAGAGTGGCACGTCACCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp ACTATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACTGCCTGGACTGTTTaGCAGAGAGAAAGTACTGTC +
Preference number: 4 (lower is better)
Translates to: TMGCFVALVPETPRSRWCTAWTV*QRESTV
Trigger: GACAGTACTTTCTCTCTGGCAAACAGTCCAGGCAGT...GCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACGGTACAGCTGTGGTCTaGTCCCTCCAGCTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNGTAVV*SLQLPF
Trigger: AAAGGGAAGCTGGAGGGAGCAGACCACAGCTGTACC...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATCCAGCAAAACATCCTaGAAGGCTCCCCGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTSSKTS*KAPRGF
Trigger: GAAGCCACGGGGAGCCTTGCAGGATGTTTTGCTGGA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTAGCCAGAAGAGATGCTaGATCAGGGCATGGCTCTAT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFSQKRC*IRAWLY
Trigger: ATAGAGCCATGCCCTGATGCAGCATCTCTTCTGGCT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTCACATTCTGGGCTCTaGTTGGAAGCCAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWSHSGL*LEARRD
Trigger: ATCTCTTCTGGCTTCCAAGCAGAGCCCAGAATGTGA...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACATTGAGGTACACTCTCTaGCCAGTCCAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTLRYTL*PVQHPG
Trigger: TCCTGGATGTTGGACTGGGCAGAGAGTGTACCTCAA...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTGTGGACAAAAGCACTaGAATTTGCACAAGTATAGG +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSCGQKH*NLHKYR
Trigger: CCTATACTTGTGCAAATTGCAGTGCTTTTGTCCACA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CCTGAACCCACTTCTCAGCCAGCTGTCCTAGCTTCAGAGCACAGCTTCTGCCTGTCATATATTACTTCTTaGCGTTTGACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: PEPTSQPAVLASEHSFCLSYITS*RLTTSF
Trigger: GAAAGATGTGGTCAAACGGCAAGAAGTAATATATGA...CAGGCAGAAGCTGTGCTCTGAAGCTAGGACAGCTGGCTGAGAAGTGGGTTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGTTTCAACCTTCCTGCTaGATTCTTCAGAAACACACT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEFQPSC*ILQKHT
Trigger: AGTGTGTTTCTGAAGAATGCAGCAGGAAGGTTGAAA...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGATAAATATCTCCATCTaGAAGGCCAGCTTGCAATTC +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEINISI*KASLQF
Trigger: GAATTGCAAGCTGGCCTTGCAGATGGAGATATTTAT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACCCAAAACGCAGAGGGTaGACATCGTTCTGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYPKRRG*TSFCSV
Trigger: GACACTGCAGAACGATGTGCACCCTCTGCGTTTTGG...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ACAAAACAACTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCACGGGAAGGCCCTCTTTaGAAGCACAGAGCTGCACCT +
Preference number: 4 (lower is better)
Translates to: TKQLQQPKEFPHDTSFQSREGPL*KHRAAP
Trigger: AGGTGCAGCTCTGTGCTTCCAAAGAGGGCCTTCCCG...TGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAGTTGTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGATATATTCTCTCTTCTaGGCTCAGCCATACCTTGTA +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEIYSLF*AQPYLV
Trigger: TACAAGGTATGGCTGAGCCCAGAAGAGAGAATATAT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGGAATCAGGATGTCTTaGGTGTTGTGTGATATATTC +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSGIRMS*VLCDIF
Trigger: GAATATATCACACAACACCCAAGACATCCTGATTCC...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAGCTCAACAAGACGTTTaGAATCAGGATGTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SPCVYADRSPCTYTDQVQAQQDV*NQDVLG
Trigger: ACCCAAGACATCCTGATTCCAAACGTCTTGTTGAGC...TTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCTTTCAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGCTTCATCGTCTATTTaGGCTTCCTCAGCGTCACCC +
Preference number: 4 (lower is better)
Translates to: LFQPLGIPDVSKTITCTYASSSI*ASSASP
Trigger: GGGTGACGCTGAGGAAGCCCAAATAGACGATGAAGC...GTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTGAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTCTCCTCCACGTCGCCTaGGTCAGCAGGCTCACTCTC +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCLLHVA*VSRLTL
Trigger: GAGAGTGAGCCTGCTGACCCAGGCGACGTGGAGGAG...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTCAGCTCATACTCCGGTaGTTCATTTCTGCATCGCTG +
Preference number: 4 (lower is better)
Translates to: IEVVHITSFIHIKPSLTGQLILR*FISASL
Trigger: CAGCGATGCAGAAATGAACCACCGGAGTATGAGCTG...ACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361243.6
CDS-3UTR CCA 90 bp TGCAAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTTTGTCCAATCCAGGATaGCTGATTGTCATTAATGAG +
Preference number: 4 (lower is better)
Translates to: CKTRVVCARDGFRGKPVSLSNPG*LIVINE
Trigger: CTCATTAATGACAATCAGCCATCCTGGATTGGACAA...AGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGCTTGATGGAGAACATGGTGTCCCGGCGTGGAAACAGTATGGGGAATTCAGTCTCTATTGGCAAATATTaGGGTGGTAGCGGTTTCATC +
Preference number: 4 (lower is better)
Translates to: SLMENMVSRRGNSMGNSVSIGKY*GGSGFI
Trigger: GATGAAACCGCTACCACCCCAATATTTGCCAATAGA...GACTGAATTCCCCATACTGTTTCCACGCCGGGACACCATGTTCTCCATCAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TTCTTCTGGCATTCCCCGTGTGTATATGCAGACAGGTCCCCATGTACGTACACACTGCTTCCAGCTGTTTaGACTCAATCTCAAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FFWHSPCVYADRSPCTYTLLPAV*TQSQSL
Trigger: GAGACTTTGAGATTGAGTCCAAACAGCTGGAAGCAG...TGTGTACGTACATGGGGACCTGTCTGCATATACACACGGGGAATGCCAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGTGGAAGAATTGGCTATaGATACTGATCAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWWKNWL*ILISSS
Trigger: GGATGAGCTGATCAGTATCCATAGCCAATTCTTCCA...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGACCCTGATTTGGCTATaGAAGGTGCAGATGGCGAGG +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRTLIWL*KVQMAR
Trigger: CCTCGCCATCTGCACCTTCCATAGCCAAATCAGGGT...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CTCCTTCCCCACCCGACACTCAATATCATCTGTTGCTTATTGTCCAGGACCTGGGGTTCAGACCTTACTTaGATACACTCTTTCAGCCTT +
Preference number: 4 (lower is better)
Translates to: LLPHPTLNIICCLLSRTWGSDLT*IHSFSL
Trigger: AAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACC...CCAGGTCCTGGACAATAAGCAACAGATGATATTGAGTGTCGGGTGGGGAAGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp AGATCGAGGTGGTGCACATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTGGCCCCTTCTGAGTaGTCAGTGACAATCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RSRWCTSRLLYTSSLLSLVAPSE*SVTIKR
Trigger: CCTTTTGATTGTCACTGACCACTCAGAAGGGGCCAC...CAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGATGTGCACCACCTCGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTCTCCAGATCTGCACTaGCAGGAACTGCTACACATG +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCSPDLH*QELLHM
Trigger: CATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGA...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATAATGGTGAGTAGGCCTCTTCACTTTATCCATGGCCAAAACATGTGGGTAAACCCTGCACACACCAGCTaGGGAAAGCCTCAAGTGAAC +
Preference number: 4 (lower is better)
Translates to: IMVSRPLHFIHGQNMWVNPAHTS*GKPQVN
Trigger: GTTCACTTGAGGCTTTCCCCAGCTGGTGTGTGCAGG...GTTTACCCACATGTTTTGGCCATGGATAAAGTGAAGAGGCCTACTCACCATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGGTGGACAGCAACTTCTaGATCAAGTTCTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWVDSNF*IKFWPL
Trigger: TAGAGGCCAGAACTTGATCCAGAAGTTGCTGTCCAC...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCACGTCTTTTATACACATCAAGCCTTCTCTCACTGGTTTCACAAATGTTTGTACCAGGCACGCCCCATaGCCTGTGCTCATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: ITSFIHIKPSLTGFTNVCTRHAP*PVLMPS
Trigger: TGAGGGCATGAGCACAGGCCATGGGGCGTGCCTGGT...ACAAACATTTGTGAAACCAGTGAGAGAAGGCTTGATGTGTATAAAAGACGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR CCA 90 bp ATCTCAGGACTCCCAAATCGTTCAATTGGACTTGAACTCAGAAGGGAAACTGGAATGCACCTGACAGTATaGGACACCGTTCTGACGGCT +
Preference number: 4 (lower is better)
Translates to: ISGLPNRSIGLELRRETGMHLTV*DTVLTA
Trigger: AGCCGTCAGAACGGTGTCCCATACTGTCAGGTGCAT...TCCAGTTTCCCTTCTGAGTTCAAGTCCAATTGAACGATTTGGGAGTCCTGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR CCA 90 bp ATAGATTCTTACAGCCACCACCACGAACAAGACAAAACAACTCCAACAACCCAAAGCAGCAGGGTGTGGTaGCATGTGCCTGTATTCCCA +
Preference number: 4 (lower is better)
Translates to: IDSYSHHHEQDKTTPTTQSSRVW*HVPVFP
Trigger: TGGGAATACAGGCACATGCCACCACACCCTGCTGCT...TTGGGTTGTTGGAGTTGTTTTGTCTTGTTCGTGGTGGTGGCTGTAAGAATCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp ATGGGTTGTTTTGTTGCTTTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACAGCATCATGCAAACTCTaGTCTGTCCCCAATACATTC +
Preference number: 4 (lower is better)
Translates to: MGCFVALVPETPRSRWCTASCKL*SVPNTF
Trigger: GAATGTATTGGGGACAGATCAGAGTTTGCATGATGC...TGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAAAGCAACAAAACAACCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTATGTCCAACTCTCGATaGTGCCTCACAGAACAGTCT +
Preference number: 4 (lower is better)
Translates to: CRQVPMYVHRSSPKHLLFMSNSR*CLTEQS
Trigger: AGACTGTTCTGTGAGGCATCATCGAGAGTTGGACAT...AAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACATGGCATCTGGGTTCATaGGCCCATGTTCCATTTCCC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTWHLGS*AHVPFP
Trigger: GGGAAATGGAACATGGGCTCATGAACCCAGATGCCA...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp AAAACACGGGTGGTATGTGCCCGGGATGGGTTTAGAGGGAAACCAGTCTCTGAGATTACTAAATGCAAGTaGAGACTCAGCAGGTTTGTT +
Preference number: 4 (lower is better)
Translates to: KTRVVCARDGFRGKPVSEITKCK*RLSRFV
Trigger: AACAAACCTGCTGAGTCTTCACTTGCATTTAGTAAT...CTCAGAGACTGGTTTCCCTCTAAACCCATCCCGGGCACATACCACCCGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTAGTGCCTGAAACACCGAGATCGAGGTGGTGCACATCACGTCTTTTATACACACTTCTCGCCTCCTTTTaGAGCATTCATCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: LVPETPRSRWCTSRLLYTLLASF*SIHLMA
Trigger: AGCCATCAGATGAATGCTTCAAAAGGAGGCGAGAAG...TGTGTATAAAAGACGTGATGTGCACCACCTCGATCTCGGTGTTTCAGGCACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TATGCAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTGCCTTTAGGAATTCCTaGCGTGTCCAAAACCATCAC +
Preference number: 4 (lower is better)
Translates to: YADRSPCTYTDQVQNICCAFRNS*RVQNHH
Trigger: GTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGC...ACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTGTCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR TCA 90 bp TTTGTGTTCCCCCAAATAAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACAGAATGGGAGGTCTCCTaGCAACATCCCCAAGAACTC +
Preference number: 4 (lower is better)
Translates to: FVFPQIKGIRRFRPYLDTEWEVS*QHPQEL
Trigger: GAGTTCTTGGGGATGTTGTCAGGAGACCTCCCATTC...TGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTTATTTGGGGGAACACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTCAAGCCTTCTAGACTaGAACTTCTCCTATGAATGG +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEASSLLD*NFSYEW
Trigger: CCATTCATAGGAGAAGTTTCAGTCTAGAAGGCTTGA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394518.7
CDS-3UTR TCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCCTGCTACTCTCCTCATaGAGAGCATGTCACTTTCTA +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPLLLSS*RACHFL
Trigger: TAGAAAGTGACATGCTCTTCATGAGGAGAGTAGCAG...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR TCA 90 bp CTCATGAAGAGCATGTCACTTTCTACACTTGAGAGATCAAATCTGAAATCCAGACACCTGTGGGGAGAGTaGCTTGTGGTCTGCTTACCC +
Preference number: 4 (lower is better)
Translates to: LMKSMSLSTLERSNLKSRHLWGE*LVVCLP
Trigger: GGGTAAGCAGACCACAAGTCACTCTCCCCACAGGTG...TCTGGATTTCAGATTTGATCTCTCAAGTGTAGAAAGTGACATGCTCTTCATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp CTCCAACAACCCAAAGAATTCCCTCATGATACCTCTTTCCAGTCAGACTTCCCCTTGGAAGCACAGAGCTaGACCTTCACTGTTTCACAA +
Preference number: 4 (lower is better)
Translates to: LQQPKEFPHDTSFQSDFPLEAQS*TFTVSQ
Trigger: TTGTGAAACAGTGAAGGTGCAGCTCTGTGCTTCCAA...GGGGAAGTCTGACTGGAAAGAGGTATCATGAGGGAATTCTTTGGGTTGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560302.5
CDS-3UTR GCA 90 bp ATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGTTTTGTGTTCCCCCTGGGCAGCACTGAGTaGTCTCAGTCTCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: MYVHRSSPKHLLFGFVFPLGSTE*SQSLQK
Trigger: CTTCTGAAGAGACTGAGAGCACTCAGTGCTGCCCAG...GGGGAACACAAAACCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGCCTTTAGGAATTCCTGACGTGTCCAAAACCATCACCTGTACTTACGAGGCCTTGACATGCAGAGTCTaGACAAAGTTTATCGTCTCC +
Preference number: 4 (lower is better)
Translates to: QPLGIPDVSKTITCTYEALTCRV*TKFIVS
Trigger: GGAGACGATAAACTTTGTGCAGACTCTGCATGTCAA...GGCCTCGTAAGTACAGGTGATGGTTTTGGACACGTCAGGAATTCCTAAAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361243.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AAAAGGCATTCGGAGGTTCAGACCTTACTTGGATACACTCTTTCAGCCTTTAGGTTGAGGTACACTCTCTaGCCAGTCCAACATCCAGGA +
Preference number: 4 (lower is better)
Translates to: KRHSEVQTLLGYTLSAFRLRYTL*PVQHPG
Trigger: TCCTGGATGTTGGACTGGGCAGAGAGTGTACCTCAA...CCTAAAGGCTGAAAGAGTGTATCCAAGTAAGGTCTGAACCTCCGAATGCCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361243.6
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp AGCTCCTCTCCAGATCTGCACTGGCAGGAACTGCTACACATGGCTTCACCCTTCTCATATATTACTTCTTaGCGTTTGACCACATCTTTC +
Preference number: 4 (lower is better)
Translates to: SSSPDLHWQELLHMASPFSYITS*RLTTSF
Trigger: GAAAGATGTGGTCAAACGGCAAGAAGTAATATATGA...GAAGGGTGAAGCCATGTGTAGCAGTTCCTGCCAGTGCAGATCTGGAGAGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394510.6
ENST00000394518.7
CDS-3UTR GCA 90 bp CAGACAGGTCCCCATGTACGTACACAGATCAAGTCCAAAACATCTGCTGTTTGGACCTTTCTCCTCATGTaGCACTTCTCTCACAATCAG +
Preference number: 4 (lower is better)
Translates to: QTGPHVRTQIKSKTSAVWTFLLM*HFSHNQ
Trigger: CTGATTGTGAGAGAAGTGGCACATGAGGAGAAAGGT...CCAAACAGCAGATGTTTTGGACTTGATCTGTGTACGTACATGGGGACCTG