RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP12 (Homo sapiens)

Ensembl gene IDs: ENSG00000131016

Ensembl transcript IDs: ENST00000253332.5, ENST00000354675.10, ENST00000359755.5, ENST00000402676.7, ENST00000490177.1

Found 1038 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTACAAAAAGCAGTCATAAAGCAGCTACTCATGGAATCGCAACTGTaGTGGCCAGCGAGCACCTGGCCACAGGTGGTAGGAAAAGACAAA +
Preference number: 1 (lower is better)
Translates to: VQKAVIKQLLMESQL*WPASTWPQVVGKDK
Trigger: TTTGTCTTTTCCTACCACCTGTGGCCAGGTGCTCGCTGGCCATCACAGTTGCGATTCCATGAGTAGCTGCTTTATGACTGCTTTTTGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR CCA 90 bp CCAGCGAGCACCTGGCCACAGGTGGTAGGAAAAGACAAACGCGGGTaGAATTTAAACAAAAACGTCAATTTCCCACAAACTACACAAATC +
Preference number: 1 (lower is better)
Translates to: PASTWPQVVGKDKRG*NLNKNVNFPQTTQI
Trigger: GATTTGTGTAGTTTGTGGGAAATTGACGTTTTTGTTTAAATTCCACCCGCGTTTGTCTTTTCCTACCACCTGTGGCCAGGTGCTCGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR TCA 90 bp ATGAAGCCTCAGGATTGTCAGGGGCTCTCTAGAAATGAGATCAGTTaGTGTGCCTGCTCTCCAATTCTCAAAGTTCTGAAATACTGGTCT +
Preference number: 1 (lower is better)
Translates to: MKPQDCQGLSRNEIS*CACSPILKVLKYWS
Trigger: AGACCAGTATTTCAGAACTTTGAGAATTGGAGAGCAGGCACATCAACTGATCTCATTTCTAGAGAGCCCCTGACAATCCTGAGGCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR CCA 90 bp AATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTCGGCCATaGCTTCCTCTGAACACACAAACCAGTGACAAGGGGTTTCATGTA +
Preference number: 1 (lower is better)
Translates to: NLKSYWFISGKLSRP*LPLNTQTSDKGFHV
Trigger: TACATGAAACCCCTTGTCACTGGTTTGTGTGTTCAGAGGAAGCCATGGCCGAGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR CCA 90 bp ACCAGATGGTACAATTGTAGCAAGAACGTCAATCTGAAAAGCTACTaGTTTATTTCAGGAAAGCTATCTCGGCCATGGCTTCCTCTGAAC +
Preference number: 1 (lower is better)
Translates to: TRWYNCSKNVNLKSY*FISGKLSRPWLPLN
Trigger: GTTCAGAGGAAGCCATGGCCGAGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACAATTGTACCATCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR TCA 90 bp GAAATGAGATCAGTTGATGTGCCTGCTCTCCAATTCTCAAAGTTCTaGAATACTGGTCTTCAGTCTCAGCAGCAGCATTCATTTTCTTCT +
Preference number: 1 (lower is better)
Translates to: EMRSVDVPALQFSKF*NTGLQSQQQHSFSS
Trigger: AGAAGAAAATGAATGCTGCTGCTGAGACTGAAGACCAGTATTTCAGAACTTTGAGAATTGGAGAGCAGGCACATCAACTGATCTCATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR TCA 90 bp TTTCAGGAATTACCAGATGGTACAATTGTAGCAAGAACGTCAATCTaGAAAGCTACTGGTTTATTTCAGGAAAGCTATCTCGGCCATGGC +
Preference number: 1 (lower is better)
Translates to: FQELPDGTIVARTSI*KATGLFQESYLGHG
Trigger: GCCATGGCCGAGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACAATTGTACCATCTGGTAATTCCTGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR TCA 90 bp GAAAGCTATATGCCAGGCCAGTTCTGTGTGTCAAGAGTAGATAAGTaGCACTATTCTTCGTGTGACAATTGTCTGACAAAACCCTTAATG +
Preference number: 1 (lower is better)
Translates to: ESYMPGQFCVSRVDK*HYSSCDNCLTKPLM
Trigger: CATTAAGGGTTTTGTCAGACAATTGTCACACGAAGAATAGTGTCACTTATCTACTCTTGACACACAGAACTGGCCTGGCATATAGCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR CCA 90 bp TCAGAAAGTTCTAGCTTATCAATCATTATCTTTAGAATTCTAATGTaGTACACATATGTCCCAGGCTTCCTGGTATCTAATAAAACCAGC +
Preference number: 1 (lower is better)
Translates to: SESSSLSIIIFRILM*YTYVPGFLVSNKTS
Trigger: GCTGGTTTTATTAGATACCAGGAAGCCTGGGACATATGTGTACCACATTAGAATTCTAAAGATAATGATTGATAAGCTAGAACTTTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAAAGCTCCCCAAGCCTaGACTATGGCACATGCCCCA +
Preference number: 2 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVKAPQA*TMAHAP
Trigger: TGGGGCATGTGCCATAGTGCAGGCTTGGGGAGCTTT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTGCACTATGGCACATaGCCCATCATATACTGTGTG +
Preference number: 2 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLHYGT*PIIYCV
Trigger: CACACAGTATATGATGGGGCATGTGCCATAGTGCAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAAAGCTCCCCAAGCCTaGACTATGGCACATGCCCCA +
Preference number: 2 (lower is better)
Translates to: PNECVATLFLKEWHKYGTKAPQA*TMAHAP
Trigger: TGGGGCATGTGCCATAGTGCAGGCTTGGGGAGCTTT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCCCAAGCCTGCACTATaGCACATGCCCCATCATATA +
Preference number: 2 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSPKPAL*HMPHHI
Trigger: TATATGATGGGGCATGTGCCATAGTGCAGGCTTGGG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAGAAATGAGATCAGTTaGTGTGCCTGCTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVRNEIS*CACSPI
Trigger: AATTGGAGAGCAGGCACATCAACTGATCTCATTTCT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCCAAGCCTGCACTATaGCACATGCCCCATCATATA +
Preference number: 2 (lower is better)
Translates to: PNECVATLFLKEWHKYGTPKPAL*HMPHHI
Trigger: TATATGATGGGGCATGTGCCATAGTGCAGGCTTGGG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCCCAAGCCTGCACTATaGCACATGCCCCATCATATA +
Preference number: 2 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIPKPAL*HMPHHI
Trigger: TATATGATGGGGCATGTGCCATAGTGCAGGCTTGGG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACGTGGGTTATATAACTaGGGCTTAAAGCTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: PNECVATLFLKEWHKYGTRGLYN*GLKLPK
Trigger: CTTGGGGAGCTTTAAGCCTCAGTTATATAACCCACG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTGCACTATGGCACATaGCCCATCATATACTGTGTG +
Preference number: 2 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLHYGT*PIIYCV
Trigger: CACACAGTATATGATGGGGCATGTGCCATAGTGCAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTTGTCTTCACATTCTaGTCTTCCAAACAGACAATG +
Preference number: 2 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLVFTF*SSKQTM
Trigger: CATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGGAAAATTGTAGGTTaGTCTTGGAAAGAGGAAATG +
Preference number: 2 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGKIVG*SWKEEM
Trigger: CATTTCCTCTTTCCAAGACCAACCTACAATTTTCCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTAAGCTATCTCGGCCATaGCTTCCTCTGAACACACAA +
Preference number: 2 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIKLSRP*LPLNTQ
Trigger: TTGTGTGTTCAGAGGAAGCCATGGCCGAGATAGCTT...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCAATTCTCAAAGTTCTaGAATACTGGTCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVQFSKF*NTGLQS
Trigger: AGACTGAAGACCAGTATTTCAGAACTTTGAGAATTG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAGAAATGAGATCAGTTaGTGTGCCTGCTCTCCAATT +
Preference number: 2 (lower is better)
Translates to: LSRENCRLVLERGNVKWLRNEIS*CACSPI
Trigger: AATTGGAGAGCAGGCACATCAACTGATCTCATTTCT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACGTGTAATAGGAAAGTaGCCAATTTCAGAGTACCAC +
Preference number: 2 (lower is better)
Translates to: PNECVATLFLKEWHKYGTRVIGK*PISEYH
Trigger: GTGGTACTCTGAAATTGGTCACTTTCCTATTACACG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACACAGAATGTCTTCCTaGCATAGAGAGGAAGTCAAT +
Preference number: 2 (lower is better)
Translates to: KENIGTIYLCTERGNSWVHRMSS*HREEVN
Trigger: ATTGACTTCCTCTCTATGGCAGGAAGACATTCTGTG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTTGTCTTCACATTCTaGTCTTCCAAACAGACAATG +
Preference number: 2 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLVFTF*SSKQTM
Trigger: CATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGGGAAAATTGTAGGTTaGTCTTGGAAAGAGGAAATG +
Preference number: 2 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSGKIVG*SWKEEM
Trigger: CATTTCCTCTTTCCAAGACCAACCTACAATTTTCCC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCAATTCTCAAAGTTCTaGAATACTGGTCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: LSRENCRLVLERGNVKWLQFSKF*NTGLQS
Trigger: AGACTGAAGACCAGTATTTCAGAACTTTGAGAATTG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR TCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTACACTATTCTTCGTGTaGCAATTGTCTGACAAAACC +
Preference number: 2 (lower is better)
Translates to: NLPQTELGIKYCLRLEVITLFFV*QLSDKT
Trigger: GGTTTTGTCAGACAATTGTCACACGAAGAATAGTGT...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTTGTCTTCACATTCTaGTCTTCCAAACAGACAATG +
Preference number: 2 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLVFTF*SSKQTM
Trigger: CATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTAGAATGGCACAAATATaGCACAAACACAATCCAGTA +
Preference number: 2 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSRMAQI*HKHNPV
Trigger: TACTGGATTGTGTTTGTGCCATATTTGTGCCATTCT...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACAATTCTCAAAGTTCTaGAATACTGGTCTTCAGTCT +
Preference number: 2 (lower is better)
Translates to: PNECVATLFLKEWHKYGTQFSKF*NTGLQS
Trigger: AGACTGAAGACCAGTATTTCAGAACTTTGAGAATTG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTTTCTAACCTCCACTaGGTTAGAAAGAAAAATTTC +
Preference number: 2 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLSNLH*VRKKNF
Trigger: GAAATTTTTCTTTCTAACCCAGTGGAGGTTAGAAAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR TCA 72 bp GCAGTCATAAAGCAGCTACTCATGGAATCGCAACTGTaGTGGCCAGCGAGCACCTGGCCACAGGTGGTAGGA +
Preference number: 3 (lower is better)
Translates to: AVIKQLLMESQL*WPASTWPQVVG
Trigger: TCCTACCACCTGTGGCCAGGTGCTCGCTGGCCATCACAGTTGCGATTCCATGAGTAGCTGCTTTATGACTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR TCA 72 bp CATCTAGGAGGCTCTGTTTTTCGTGGGTTATATAACTaGGGCTTAAAGCTCCCCAAGCCTGCACTATGGCAC +
Preference number: 3 (lower is better)
Translates to: HLGGSVFRGLYN*GLKLPKPALWH
Trigger: GTGCCATAGTGCAGGCTTGGGGAGCTTTAAGCCTCAGTTATATAACCCACGAAAAACAGAGCCTCCTAGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR CCA 72 bp AGCTACTGGTTTATTTCAGGAAAGCTATCTCGGCCATaGCTTCCTCTGAACACACAAACCAGTGACAAGGGG +
Preference number: 3 (lower is better)
Translates to: SYWFISGKLSRP*LPLNTQTSDKG
Trigger: CCCCTTGTCACTGGTTTGTGTGTTCAGAGGAAGCCATGGCCGAGATAGCTTTCCTGAAATAAACCAGTAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR TCA 72 bp ATCTCGGCCATGGCTTCCTCTGAACACACAAACCAGTaGCAAGGGGTTTCATGTAATGACTACATCAGAAAG +
Preference number: 3 (lower is better)
Translates to: ISAMASSEHTNQ*QGVSCNDYIRK
Trigger: CTTTCTGATGTAGTCATTACATGAAACCCCTTGTCACTGGTTTGTGTGTTCAGAGGAAGCCATGGCCGAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR TCA 72 bp TCAGTTGATGTGCCTGCTCTCCAATTCTCAAAGTTCTaGAATACTGGTCTTCAGTCTCAGCAGCAGCATTCA +
Preference number: 3 (lower is better)
Translates to: SVDVPALQFSKF*NTGLQSQQQHS
Trigger: TGAATGCTGCTGCTGAGACTGAAGACCAGTATTTCAGAACTTTGAGAATTGGAGAGCAGGCACATCAACTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR TCA 72 bp CAGGATTGTCAGGGGCTCTCTAGAAATGAGATCAGTTaGTGTGCCTGCTCTCCAATTCTCAAAGTTCTGAAA +
Preference number: 3 (lower is better)
Translates to: QDCQGLSRNEIS*CACSPILKVLK
Trigger: TTTCAGAACTTTGAGAATTGGAGAGCAGGCACATCAACTGATCTCATTTCTAGAGAGCCCCTGACAATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR CCA 72 bp ACCTGGCCACAGGTGGTAGGAAAAGACAAACGCGGGTaGAATTTAAACAAAAACGTCAATTTCCCACAAACT +
Preference number: 3 (lower is better)
Translates to: TWPQVVGKDKRG*NLNKNVNFPQT
Trigger: AGTTTGTGGGAAATTGACGTTTTTGTTTAAATTCCACCCGCGTTTGTCTTTTCCTACCACCTGTGGCCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR TCA 72 bp ATGCCAGGCCAGTTCTGTGTGTCAAGAGTAGATAAGTaGCACTATTCTTCGTGTGACAATTGTCTGACAAAA +
Preference number: 3 (lower is better)
Translates to: MPGQFCVSRVDK*HYSSCDNCLTK
Trigger: TTTTGTCAGACAATTGTCACACGAAGAATAGTGTCACTTATCTACTCTTGACACACAGAACTGGCCTGGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR CCA 72 bp TACAATTGTAGCAAGAACGTCAATCTGAAAAGCTACTaGTTTATTTCAGGAAAGCTATCTCGGCCATGGCTT +
Preference number: 3 (lower is better)
Translates to: YNCSKNVNLKSY*FISGKLSRPWL
Trigger: AAGCCATGGCCGAGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACAATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR CCA 72 bp AATTTTCAAACTGGAGTACCAAGTTTGAGTAAAATCTaGAAAGCTATATGCCAGGCCAGTTCTGTGTGTCAA +
Preference number: 3 (lower is better)
Translates to: NFQTGVPSLSKI*KAICQASSVCQ
Trigger: TTGACACACAGAACTGGCCTGGCATATAGCTTTCCAGATTTTACTCAAACTTGGTACTCCAGTTTGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGGGAAAATTGTAGGTaGGTCTTGGAAAGAGGAAAT +
Preference number: 3 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSRENCR*VLERGN
Trigger: ATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
3UTR-3UTR CAA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTAGGGAAAATTGTAGGTaGGTCTTGGAAAGAGGAAAT +
Preference number: 3 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSRENCR*VLERGN
Trigger: ATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCT...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
3UTR-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGGGAAAATTGTAGGTaGGTCTTGGAAAGAGGAAAT +
Preference number: 3 (lower is better)
Translates to: PNECVATLFLKEWHKYGTRENCR*VLERGN
Trigger: ATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCGCCCAGCCTGCGAATaGAGGAGACGCGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVRPACE*RRRARG
Trigger: GCCGCGAGCGCGTCTCCTTCATTCGCAGGCTGGGCG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGCCGGCTCCTGTGGGTaGGCTTGCTCGGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVAGSCG*ACSEAV
Trigger: GACCGCCTCCGAGCAAGCCCACCCACAGGAGCCGGC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGGATCAGAGCGGACTaGGCGCCCAGACACTCCCGG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGIRAD*APRHSR
Trigger: CCGGGAGTGTCTGGGCGCTCAGTCCGCTCTGATCCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354675.10
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCGCCGCCAGCCGACTaGGAACGCGCCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSPPAD*ERAQPA
Trigger: CGCAGGCTGGGCGCGTTCGCAGTCGGCTGGCGGCGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTCGCCGCCAGCCGACTaGGAACGCGCCCAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSSPPAD*ERAQPA
Trigger: CGCAGGCTGGGCGCGTTCGCAGTCGGCTGGCGGCGA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTGCTCCGGGCTGCGCTaGTCGGTGGAGCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLCSGLR*SVELPA
Trigger: CGCCGGGAGCTCCACCGAGCAGCGCAGCCCGGAGCA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCGCTGCGGGGCGAACTaGCGCTTGGGTGCACGTGCT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVRCGAN*RLGARA
Trigger: AGCACGTGCACCCAAGCGGCAGTTCGCCCCGCAGCG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359755.5
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTGGCTGCGCTGCTCGGTaGAGCTCCCGGCGCCCATGG +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSGCAAR*SSRRPW
Trigger: CCATGGGCGCCGGGAGCTCCACCGAGCAGCGCAGCC...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGGCTCCTCAGGGGATaGGGCAGAGCTCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGLLRG*GRALAL
Trigger: AAGGGCGAGAGCTCTGCCTCATCCCCTGAGGAGCCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATGCTCCGGGCTGCGCTaGTCGGTGGAGCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLCSGLR*SVELPA
Trigger: CGCCGGGAGCTCCACCGAGCAGCGCAGCCCGGAGCA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCGGCTGCTCCGGGCTaGGCTGCTCGGTGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLAAAPG*AARWSS
Trigger: GGAGCTCCACCGAGCAGCGCAGCCCGGAGCAGCCGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGTGGTCGCCAGCCCCTaGTGCTCCCTCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVVVASP*CSLPFI
Trigger: GATGAAGGGGAGGGAGCAGCAGGGGCTGGCGACCAC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGCTGCGCTGCTCGGTaGAGCTCCCGGCGCCCATGG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGCAAR*SSRRPW
Trigger: CCATGGGCGCCGGGAGCTCCACCGAGCAGCGCAGCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCCGGCTCCTGTGGGTaGGCTTGCTCGGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLAGSCG*ACSEAV
Trigger: GACCGCCTCCGAGCAAGCCCACCCACAGGAGCCGGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCGCCCAGCCTGCGAATaGAGGAGACGCGCTCGCGGC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFRPACE*RRRARG
Trigger: GCCGCGAGCGCGTCTCCTTCATTCGCAGGCTGGGCG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGACACCTCAGTGGCTaGCTTCTGCTCGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGHLSG*LLLGLL
Trigger: GAGCAGCCCGAGCAGAAGGCAGCCACTGAGGTGTCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGCTTAGCGGGTCCCTaGCCTCCCCGGCAGACGCCT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSLAGP*PPRQTP
Trigger: AGGCGTCTGCCGGGGAGGGCAGGGACCCGCTAAGCT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354675.10
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGCTCCCGGCGCCCATaGCTCCTCCGCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSSRRP*LLRTSP
Trigger: GGGAGAAGTGCGGAGGAGCCATGGGCGCCGGGAGCT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGTCCGAGGCAGCGATaGCGGGGTCCGCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGPRQR*RGPRWC
Trigger: ACACCACCGCGGACCCCGCCATCGCTGCCTCGGACC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGCCGGCTCCTGTGGGTaGGCTTGCTCGGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFAGSCG*ACSEAV
Trigger: GACCGCCTCCGAGCAAGCCCACCCACAGGAGCCGGC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCCGGCTCCTGTGGGTaGGCTTGCTCGGAGGCGGTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLAGSCG*ACSEAV
Trigger: GACCGCCTCCGAGCAAGCCCACCCACAGGAGCCGGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGATAACCGGGGCTCGTaGGCACTTTCTGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVDNRGS*ALSAGS
Trigger: GGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGACAGTCGGGCCCTGTaGGCACAGCATCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVDSRAL*AQHLPL
Trigger: CAGGGGAAGATGCTGTGCCCACAGGGCCCGACTGTC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGGCTCCTCAGGGGATaGGGCAGAGCTCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGLLRG*GRALAL
Trigger: AAGGGCGAGAGCTCTGCCTCATCCCCTGAGGAGCCC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGTGGTCGCCAGCCCCTaGTGCTCCCTCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLVVASP*CSLPFI
Trigger: GATGAAGGGGAGGGAGCAGCAGGGGCTGGCGACCAC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGTGGTCGCCAGCCCCTaGTGCTCCCTCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSVVASP*CSLPFI
Trigger: GATGAAGGGGAGGGAGCAGCAGGGGCTGGCGACCAC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTCCTGTGGGTGGGCTTaGTCGGAGGCGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSCGWA*SEAVSF
Trigger: GAAACTGACCGCCTCCGAGCAAGCCCACCCACAGGA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTCGTGGGCACTTTCTaGCGGCTCCTGTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLVGTF*RLLWVG
Trigger: GCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGAGCTCTCGCCCTTTTaGTCCTCCTGGCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVELSPF*SSWLSG
Trigger: TCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGTAGGGCTTCCAGCTTaGTCCGGGGAGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVVGLPA*SGEELP
Trigger: GGGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTAC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTGGGTTGTGCCTGGTaGGTCAAAGTCGGCTACGGG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLGCAW*VKVGYG
Trigger: CCCGTAGCCGACTTTGACGCACCAGGCACAACCCAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACGTGTCCGCCATCGCTaGGGGGCGAACTGCCGCTTG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLRVRHR*GANCRL
Trigger: CAAGCGGCAGTTCGCCCCGCAGCGATGGCGGACACG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359755.5
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGCTCCCGGCGCCCATaGCTCCTCCGCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSSRRP*LLRTSP
Trigger: GGGAGAAGTGCGGAGGAGCCATGGGCGCCGGGAGCT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTCTTCTGTAGGAGCTTaGTGGCGGGGTCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSSVGA*WRGPRQ
Trigger: CTGCCTCGGACCCCGCCACCAAGCTCCTACAGAAGA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTCCAGCCCCAAGGCTaGGGTCCTTGTGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLQPQG*GPCGRQ
Trigger: CTGGCGACCACAAGGACCCCAGCCTTGGGGCTGGAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTCCAGCCCCAAGGCTaGGGTCCTTGTGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLQPQG*GPCGRQ
Trigger: CTGGCGACCACAAGGACCCCAGCCTTGGGGCTGGAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTCTGCCGGCTCCTGTaGGTGGGCTTGCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFCRLL*VGLLGG
Trigger: GCCTCCGAGCAAGCCCACCCACAGGAGCCGGCAGAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCTGCCGGCTCCTGTaGGTGGGCTTGCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFCRLL*VGLLGG
Trigger: GCCTCCGAGCAAGCCCACCCACAGGAGCCGGCAGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGGCTCCTCAGGGGATaGGGCAGAGCTCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGLLRG*GRALAL
Trigger: AAGGGCGAGAGCTCTGCCTCATCCCCTGAGGAGCCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGGCTCCTCAGGGGATaGGGCAGAGCTCTCGCCCTT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGLLRG*GRALAL
Trigger: AAGGGCGAGAGCTCTGCCTCATCCCCTGAGGAGCCC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCCTTTTCCAGACACGTaGTCTCCTCGGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVPFPDT*SPRAPQ
Trigger: CTGAGGAGCCCGAGGAGATCACGTGTCTGGAAAAGG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGTGTCGATTTTGCCTaGCAGTCGGGCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGVDFA*QSGPVG
Trigger: GCCCACAGGGCCCGACTGTCAGGCAAAATCGACACC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGTGGTCGCCAGCCCCTaGTGCTCCCTCCCCTTCATC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTVVASP*CSLPFI
Trigger: GATGAAGGGGAGGGAGCAGCAGGGGCTGGCGACCAC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTCGTGGGCACTTTCTaGCGGCTCCTGTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLVGTF*RLLWVG
Trigger: GCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTCGTGGGCACTTTCTaGCGGCTCCTGTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLVGTF*RLLWVG
Trigger: GCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCTCGTGGGCACTTTCTaGCGGCTCCTGTGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVILVGTF*RLLWVG
Trigger: GCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGCTTCCCCATCCTGCTaGACCTCGGCTAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVASPSC*TSAKPF
Trigger: AAAGGGCTTAGCCGAGGTGCAGCAGGATGGGGAAGC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGGACACCTCAGTGGCTaGCTTCTGCTCGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSGHLSG*LLLGLL
Trigger: GAGCAGCCCGAGCAGAAGGCAGCCACTGAGGTGTCC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGACACCTCAGTGGCTaGCTTCTGCTCGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGHLSG*LLLGLL
Trigger: GAGCAGCCCGAGCAGAAGGCAGCCACTGAGGTGTCC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTCTGTAGGAGCTTGGTaGCGGGGTCCGAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSSVGAW*RGPRQR
Trigger: TCGCTGCCTCGGACCCCGCCACCAAGCTCCTACAGA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTCCAGCCCCAAGGCTaGGGTCCTTGTGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLQPQG*GPCGRQ
Trigger: CTGGCGACCACAAGGACCCCAGCCTTGGGGCTGGAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCTCCAGCCCCAAGGCTaGGGTCCTTGTGGTCGCCAG +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVILQPQG*GPCGRQ
Trigger: CTGGCGACCACAAGGACCCCAGCCTTGGGGCTGGAG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCATTCCTCCACTGCTTaGCCAGATTCGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVHSSTA*PDSAGG
Trigger: TCCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTCTGCCGGCTCCTGTaGGTGGGCTTGCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFFCRLL*VGLLGG
Trigger: GCCTCCGAGCAAGCCCACCCACAGGAGCCGGCAGAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTCTGCCGGCTCCTGTaGGTGGGCTTGCTCGGAGGC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFCRLL*VGLLGG
Trigger: GCCTCCGAGCAAGCCCACCCACAGGAGCCGGCAGAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGAGTGGCCTCCTCTGTaGTGTCTGGGGAGTCGGTTA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVEWPPL*CLGSRL
Trigger: TAACCGACTCCCCAGACACCACAGAGGAGGCCACTC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTCTGTGCCCCCTGACTaGGTACCAGATGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSVPPD*VPDATS
Trigger: TGAGGTCGCATCTGGTACCCAGTCAGGGGGCACAGA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGACAGTCGGGCCCTGTaGGCACAGCATCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSDSRAL*AQHLPL
Trigger: CAGGGGAAGATGCTGTGCCCACAGGGCCCGACTGTC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGACACTCCCGGAGGATaGGGGAGAACCGGAGGTGCC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFDTPGG*GRTGGA
Trigger: GGCACCTCCGGTTCTCCCCCATCCTCCGGGAGTGTC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354675.10
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTCTCCTCCACGGTGCTaGCGTGGACTTCGGCCACAA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSPPRC*RGLRPQ
Trigger: TTGTGGCCGAAGTCCACGTCAGCACCGTGGAGGAGA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTGAGTGTGCTCCCCTaGTTCCTCGTCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLSVLP*FLVSSS
Trigger: GGAGGAGGAGACGAGGAATCAGGGGAGCACACTCAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTGAGTGTGCTCCCCTaGTTCCTCGTCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLSVLP*FLVSSS
Trigger: GGAGGAGGAGACGAGGAATCAGGGGAGCACACTCAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTGCTTCTGTGCCCCCTaGCTGGGTACCAGATGCGAC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLCFCAP*LGTRCD
Trigger: GTCGCATCTGGTACCCAGTCAGGGGGCACAGAAGCA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGCTTCTGTGCCCCCTaGCTGGGTACCAGATGCGAC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSCFCAP*LGTRCD
Trigger: GTCGCATCTGGTACCCAGTCAGGGGGCACAGAAGCA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGTGTCGATTTTGCCTaGCAGTCGGGCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGVDFA*QSGPVG
Trigger: GCCCACAGGGCCCGACTGTCAGGCAAAATCGACACC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGTGTCGATTTTGCCTaGCAGTCGGGCCCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGVDFA*QSGPVG
Trigger: GCCCACAGGGCCCGACTGTCAGGCAAAATCGACACC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTCCTGTGCAGAGGCCTaGGGTTCCTCTCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSCAEA*GSSPSF
Trigger: GAAAGAAGGAGAGGAACCTCAGGCCTCTGCACAGGA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTCGGGTGTCTCCTCCTaGCCATCATCTGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSGVSS*PSSVMS
Trigger: CGACATCACAGATGATGGGCAGGAGGAGACACCCGA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTCCTGTGGGTGGGCTTaGTCGGAGGCGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSCGWA*SEAVSF
Trigger: GAAACTGACCGCCTCCGAGCAAGCCCACCCACAGGA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCCTGTGGGTGGGCTTaGTCGGAGGCGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSCGWA*SEAVSF
Trigger: GAAACTGACCGCCTCCGAGCAAGCCCACCCACAGGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAGCTGGCACAGACCCTaGTGTTTCTTCCACCTCCGT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSWHRP*CFFHLR
Trigger: ACGGAGGTGGAAGAAACAGCAGGGTCTGTGCCAGCT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGTGGTCTCCTCCCATTaGTTTTGGTCCCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVVVSSH*FWSPFL
Trigger: GAGGAAGGGGGACCAAAAGCAATGGGAGGAGACCAC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGCCCCTGTTGGCCCTaGGTCTTCAACAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGPCWP*VFNRGL
Trigger: CAAGCCCCTGTTGAAGACGCAGGGCCAACAGGGGCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGCCCCTGTTGGCCCTaGGTCTTCAACAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGPCWP*VFNRGL
Trigger: CAAGCCCCTGTTGAAGACGCAGGGCCAACAGGGGCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGACACCTCAGTGGCTaGCTTCTGCTCGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGHLSG*LLLGLL
Trigger: GAGCAGCCCGAGCAGAAGGCAGCCACTGAGGTGTCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCCCGTCAGCGACAGCTaGTGCCATCATATGAACCTG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVPVSDS*CHHMNL
Trigger: CAGGTTCATATGATGGCAGCAGCTGTCGCTGACGGG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTTCTGGCCCACCGGTaGCAGGCAGCTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLLAHR*QAAGIP
Trigger: AGGAATCCCAGCTGCCTGGCACCGGTGGGCCAGAAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTTCTGGCCCACCGGTaGCAGGCAGCTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLLAHR*QAAGIP
Trigger: AGGAATCCCAGCTGCCTGGCACCGGTGGGCCAGAAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAGTCGGCTACGGGGGTaGTTCCATCAGTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSRLRG*FHQSHC
Trigger: ACAGTGAGACTGATGGAAGCACCCCCGTAGCCGACT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTGCCTCTGCTTCTGTaGCCCCTGACTGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLPLLL*PLTGYQ
Trigger: CTGGTACCCAGTCAGGGGGCACAGAAGCAGAGGCAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTGCCTCTGCTTCTGTaGCCCCTGACTGGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLPLLL*PLTGYQ
Trigger: CTGGTACCCAGTCAGGGGGCACAGAAGCAGAGGCAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCACTGGTGTCGATTTTaGCTGACAGTCGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVHWCRF*LTVGPC
Trigger: ACAGGGCCCGACTGTCAGGCAAAATCGACACCAGTG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCTGTAGGAGCTTGGTaGCGGGGTCCGAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSVGAW*RGPRQR
Trigger: TCGCTGCCTCGGACCCCGCCACCAAGCTCCTACAGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCTTCTGTAGGAGCTTaGTGGCGGGGTCCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSSVGA*WRGPRQ
Trigger: CTGCCTCGGACCCCGCCACCAAGCTCCTACAGAAGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGATAACCGGGGCTCGTaGGCACTTTCTGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTDNRGS*ALSAGS
Trigger: GGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGATAACCGGGGCTCGTaGGCACTTTCTGCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLDNRGS*ALSAGS
Trigger: GGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGTCCGGAGAATCGGCTaGAACCTGAGTGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLVRRIG*NLSVLP
Trigger: GGGGAGCACACTCAGGTTCCAGCCGATTCTCCGGAC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTGAAGCACATCTTCTaGCCCACCGGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLKHIF*PTGARQ
Trigger: CTGCCTGGCACCGGTGGGCCAGAAGATGTGCTTCAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGACAGTCGGGCCCTGTaGGCACAGCATCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTDSRAL*AQHLPL
Trigger: CAGGGGAAGATGCTGTGCCCACAGGGCCCGACTGTC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGACAGTCGGGCCCTGTaGGCACAGCATCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLDSRAL*AQHLPL
Trigger: CAGGGGAAGATGCTGTGCCCACAGGGCCCGACTGTC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCTGCCAACCGCAGGTaGTTTCGGCGGGATCAGAGC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTPANRR*FRRDQS
Trigger: GCTCTGATCCCGCCGAAACCACCTGCGGTTGGCAGG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354675.10
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGGCGAACTGCCGCTTaGGTGCACGTGCTACTCACT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGRTAA*VHVLLT
Trigger: AGTGAGTAGCACGTGCACCCAAGCGGCAGTTCGCCC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359755.5
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCTCCTCCACGGTGCTaGCGTGGACTTCGGCCACAA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSPPRC*RGLRPQ
Trigger: TTGTGGCCGAAGTCCACGTCAGCACCGTGGAGGAGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTGAGTGTGCTCCCCTaGTTCCTCGTCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLSVLP*FLVSSS
Trigger: GGAGGAGGAGACGAGGAATCAGGGGAGCACACTCAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGAATCGGCTGGAACCTaGGTGTGCTCCCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSESAGT*VCSPDS
Trigger: GGAATCAGGGGAGCACACTCAGGTTCCAGCCGATTC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGAATCGGCTGGAACCTaGGTGTGCTCCCCTGATTCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLESAGT*VCSPDS
Trigger: GGAATCAGGGGAGCACACTCAGGTTCCAGCCGATTC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTCCTTTTCCAGACACGTaGTCTCCTCGGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSPFPDT*SPRAPQ
Trigger: CTGAGGAGCCCGAGGAGATCACGTGTCTGGAAAAGG...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGAACCTGACTCTCGCTaGGCTCCTTGGACACCTCAG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSEPDSR*APWTPQ
Trigger: CTGAGGTGTCCAAGGAGCTCAGCGAGAGTCAGGTTC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATGCTTCTGTGCCCCCTaGCTGGGTACCAGATGCGAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLCFCAP*LGTRCD
Trigger: GTCGCATCTGGTACCCAGTCAGGGGGCACAGAAGCA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGAGGAGACTTAGCGTaGCTCTGCAGTTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGGDLA*LCSSRA
Trigger: TGCTCTTGAACTGCAGAGTCACGCTAAGTCTCCTCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCAGCCGCTGTTAGAGTaGATGATGCCTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVQPLLE*MMPQSS
Trigger: AGAGCTCTGAGGCATCATTCACTCTAACAGCGGCTG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGATGGAATCGCAACTGTaGTGGCCAGCGAGCACCTGG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSMESQL*WPASTW
Trigger: CCAGGTGCTCGCTGGCCATCACAGTTGCGATTCCAT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGCTTTCTTTGGATGCTaGTTCTCCAGCCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVAFFGC*FSSPKA
Trigger: AGCCTTGGGGCTGGAGAAGCAGCATCCAAAGAAAGC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTTGCATTCCTCCACTaGTTGGCCAGATTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFAFLH*LARFGW
Trigger: CCAGCCGAATCTGGCCAAGCAGTGGAGGAATGCAAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCCTGTGGGTGGGCTTaGTCGGAGGCGGTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSCGWA*SEAVSF
Trigger: GAAACTGACCGCCTCCGAGCAAGCCCACCCACAGGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTGCGAGCCACTGACTTaGTCCTCTGAGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLCEPLT*SSEGSS
Trigger: TGAGCTGCCCTCAGAGGAGCAAGTCAGTGGCTCGCA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGCGAGCCACTGACTTaGTCCTCTGAGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSCEPLT*SSEGSS
Trigger: TGAGCTGCCCTCAGAGGAGCAAGTCAGTGGCTCGCA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGAGCTCTCGCCCTTTTaGTCCTCCTGGCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLELSPF*SSWLSG
Trigger: TCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGAGCTCTCGCCCTTTTaGTCCTCCTGGCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTELSPF*SSWLSG
Trigger: TCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTGAGCTCTCGCCCTTTTaGTCCTCCTGGCTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIELSPF*SSWLSG
Trigger: TCCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTC...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGCATTTCAGAGGCTGTaGTCTCGGTGGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVAFQRL*SRWKTR
Trigger: CCTTGTCTTCCACCGAGAGCACAGCCTCTGAAATGC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTGAGGTATCCACCTTaGGCTTTGGTTCTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLRYPP*ALVLPA
Trigger: AGCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGTAGGGCTTCCAGCTTaGTCCGGGGAGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFVGLPA*SGEELP
Trigger: GGGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTAC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAGTAGGGCTTCCAGCTTaGTCCGGGGAGGAACTTCCC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVVGLPA*SGEELP
Trigger: GGGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTAC...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTCAATAATGGTAGCTaGCCTCGTCCCGTCAGCGAC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFNNGS*PRPVSD
Trigger: GTCGCTGACGGGACGAGGGCAGCTACCATTATTGAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGCCCTGCAGTTTCTaGAGCTGTCACAGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSWPCSF*SCHSFG
Trigger: CCCGAAGCTGTGACAGCTGCAGAAACTGCAGGGCCA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGCACCCAATGGCCCTaGAGTTTCTGCAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGTQWP*SFCSCH
Trigger: GTGACAGCTGCAGAAACTGCAGGGCCATTGGGTGCC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCCGACGCTTCAGCCTaGTCTTCTGGTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPDASA*SSGLSA
Trigger: GGCAGAAAGACCAGAAGAGCAGGCTGAAGCGTCGGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTGGGTTGTGCCTGGTaGGTCAAAGTCGGCTACGGG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLGCAW*VKVGYG
Trigger: CCCGTAGCCGACTTTGACGCACCAGGCACAACCCAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTGGGTTGTGCCTGGTaGGTCAAAGTCGGCTACGGG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLGCAW*VKVGYG
Trigger: CCCGTAGCCGACTTTGACGCACCAGGCACAACCCAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTGGGTTGTGCCTGGTaGGTCAAAGTCGGCTACGGG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLGCAW*VKVGYG
Trigger: CCCGTAGCCGACTTTGACGCACCAGGCACAACCCAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGACGCCTAGTCTCCTaGCTGCCAACCGCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTRRLVS*LPTAGG
Trigger: ACCACCTGCGGTTGGCAGGCAGGAGACTAGGCGTCT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354675.10
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGCAGGAGCTTCTGCTaGAGCCGACTTTCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGRSFC*SRLSAR
Trigger: GCGAGCTGAAAGTCGGCTGCAGCAGAAGCTCCTGCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTGGGTTCGCTTTCTTTaGATGCTGCTTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVWVRFL*MLLLQP
Trigger: GGGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGTCCGGAGAATCGGCTaGAACCTGAGTGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTVRRIG*NLSVLP
Trigger: GGGGAGCACACTCAGGTTCCAGCCGATTCTCCGGAC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGTCCGGAGAATCGGCTaGAACCTGAGTGTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLVRRIG*NLSVLP
Trigger: GGGGAGCACACTCAGGTTCCAGCCGATTCTCCGGAC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCCTTTTGCTCCTCCTaGCTGTCCGGAGAATCGGCT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPFCSS*LSGESA
Trigger: AGCCGATTCTCCGGACAGCCAGGAGGAGCAAAAGGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCGTTGGCCCCTGTTaGCCCTGCGTCTTCAACAGG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFVGPC*PCVFNR
Trigger: CCTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCAGAGTCATCTTCGTTaGCCCCTGTTGGCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSQSHLR*PLLALR
Trigger: ACGCAGGGCCAACAGGGGCCAACGAAGATGACTCTG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGGGAGTCGGTTAACTaGGAGACTGCTGACACCATT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGESVN*ETADTI
Trigger: AATGGTGTCAGCAGTCTCCCAGTTAACCGACTCCCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGAGTGGCCTCCTCTGTaGTGTCTGGGGAGTCGGTTA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSEWPPL*CLGSRL
Trigger: TAACCGACTCCCCAGACACCACAGAGGAGGCCACTC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTGAGTGGCCTCCTCTGTaGTGTCTGGGGAGTCGGTTA +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSEWPPL*CLGSRL
Trigger: TAACCGACTCCCCAGACACCACAGAGGAGGCCACTC...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTGAAGCACATCTTCTaGCCCACCGGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLKHIF*PTGARQ
Trigger: CTGCCTGGCACCGGTGGGCCAGAAGATGTGCTTCAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTGAAGCACATCTTCTaGCCCACCGGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLKHIF*PTGARQ
Trigger: CTGCCTGGCACCGGTGGGCCAGAAGATGTGCTTCAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTGAAGCACATCTTCTaGCCCACCGGTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLKHIF*PTGARQ
Trigger: CTGCCTGGCACCGGTGGGCCAGAAGATGTGCTTCAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTTCTGGGTTGTGCCTaGTGCGTCAAAGTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFLGCA*CVKVGY
Trigger: GTAGCCGACTTTGACGCACCAGGCACAACCCAGAAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTCACTTTGACCTCCTaGCAAGCAACCTGCTCATCG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLTLTS*QATCSS
Trigger: CGATGAGCAGGTTGCTTGCCAGGAGGTCAAAGTGAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGTCCTAAGGGACAGTTaGTGGCCCTCGGGATTCCGT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLVLRDS*WPSGFR
Trigger: ACGGAATCCCGAGGGCCACCAACTGTCCCTTAGGAC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359755.5
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTGGCCAGCGAGCACCTaGCCACAGGTGGTAGGAAAA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLWPAST*PQVVGK
Trigger: TTTTCCTACCACCTGTGGCCAGGTGCTCGCTGGCCA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGCTCAGCTACGCCATTaGTGGTGGACAGCTGACCAT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSAQLRH*WWTADH
Trigger: ATGGTCAGCTGTCCACCATCAATGGCGTAGCTGAGC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACACCCTCCTGGAGGCTaGGCTCATCTTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTHPPGG*AHLAQL
Trigger: TAGCTGAGCAAGATGAGCTCAGCCTCCAGGAGGGTG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCTGCCCATCATCTGTaGTGTCGTGAACAACCGCTG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPAHHL*CREQPL
Trigger: CAGCGGTTGTTCACGACATCACAGATGATGGGCAGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCCTCCTTCGGCTTCCTaGAACTGGTCTTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSPPSAS*NWSFCA
Trigger: GGCGCAAAAAGACCAGTTTCAGGAAGCCGAAGGAGG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGCAGGTTCAGCTTCCTaGGGTTCTGCATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVAGSAS*GSASIS
Trigger: TGAAATGGATGCAGAACCTCAGGAAGCTGAACCTGC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCTTTTCCAGACACGTaGTCTCCTCGGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLPFPDT*SPRAPQ
Trigger: CTGAGGAGCCCGAGGAGATCACGTGTCTGGAAAAGG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCACCATCTTTTTGAATaGTGCCCAGGGAGTGACACC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVHHLFE*CPGSDT
Trigger: GGTGTCACTCCCTGGGCATCATTCAAAAAGATGGTG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAGCTTCCCAAGATACTaGGGTATCCACCTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSFPRY*GIHLAL
Trigger: AAGCGCAAGGTGGATACCTCAGTATCTTGGGAAGCT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGAACCTGACTCTCGCTaGGCTCCTTGGACACCTCAG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFEPDSR*APWTPQ
Trigger: CTGAGGTGTCCAAGGAGCTCAGCGAGAGTCAGGTTC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGAACCTGACTCTCGCTaGGCTCCTTGGACACCTCAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLEPDSR*APWTPQ
Trigger: CTGAGGTGTCCAAGGAGCTCAGCGAGAGTCAGGTTC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGCTCTCTGCACAGGCTaGAGCACATCTTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFALCTG*STSSGP
Trigger: TGGGCCAGAAGATGTGCTTCAGCCTGTGCAGAGAGC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCTCTCTGCACAGGCTaGAGCACATCTTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLALCTG*STSSGP
Trigger: TGGGCCAGAAGATGTGCTTCAGCCTGTGCAGAGAGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGCTCTCTGCACAGGCTaGAGCACATCTTCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTALCTG*STSSGP
Trigger: TGGGCCAGAAGATGTGCTTCAGCCTGTGCAGAGAGC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTGCTACACTCACTTTaGCCTCCTGGCAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLLHSL*PPGKQP
Trigger: AGGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCCTGTGCAGAGGCCTaGGGTTCCTCTCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSCAEA*GSSPSF
Trigger: GAAAGAAGGAGAGGAACCTCAGGCCTCTGCACAGGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCCTGTGCTTGGGGTGTaGTCGCTTTATCTGATTCAC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVPVLGV*SLYLIH
Trigger: GTGAATCAGATAAAGCGATCACACCCCAAGCACAGG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTCGGGTGTCTCCTCCTaGCCATCATCTGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSGVSS*PSSVMS
Trigger: CGACATCACAGATGATGGGCAGGAGGAGACACCCGA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTCGGGTGTCTCCTCCTaGCCATCATCTGTGATGTCG +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSSGVSS*PSSVMS
Trigger: CGACATCACAGATGATGGGCAGGAGGAGACACCCGA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTATTTCTGCGTGGCTTTaGTCACGCTTCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVISAWL*SRFRVS
Trigger: AGAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAAT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTGCGAGCCACTGACTTaGTCCTCTGAGGGCAGCTCA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFCEPLT*SSEGSS
Trigger: TGAGCTGCCCTCAGAGGAGCAAGTCAGTGGCTCGCA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGCTGGCACAGACCCTaGTGTTTCTTCCACCTCCGT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSWHRP*CFFHLR
Trigger: ACGGAGGTGGAAGAAACAGCAGGGTCTGTGCCAGCT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGCTTCCCCATCCTGCTaGACCTCGGCTAAGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTASPSC*TSAKPF
Trigger: AAAGGGCTTAGCCGAGGTGCAGCAGGATGGGGAAGC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATGGCCCTGCAGTTTCTaGAGCTGTCACAGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTWPCSF*SCHSFG
Trigger: CCCGAAGCTGTGACAGCTGCAGAAACTGCAGGGCCA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTGGCCCTGCAGTTTCTaGAGCTGTCACAGCTTCGGG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFWPCSF*SCHSFG
Trigger: CCCGAAGCTGTGACAGCTGCAGAAACTGCAGGGCCA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGCACCCAATGGCCCTaGAGTTTCTGCAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGTQWP*SFCSCH
Trigger: GTGACAGCTGCAGAAACTGCAGGGCCATTGGGTGCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGCACCCAATGGCCCTaGAGTTTCTGCAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGTQWP*SFCSCH
Trigger: GTGACAGCTGCAGAAACTGCAGGGCCATTGGGTGCC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTCTTTCACTTTTTCTaGCACTGCCTGGAGGACCTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLFHFF*HCLEDL
Trigger: GAGGTCCTCCAGGCAGTGGCAGAAAAAGTGAAAGAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCCGACGCTTCAGCCTaGTCTTCTGGTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLPDASA*SSGLSA
Trigger: GGCAGAAAGACCAGAAGAGCAGGCTGAAGCGTCGGG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCCGACGCTTCAGCCTaGTCTTCTGGTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTPDASA*SSGLSA
Trigger: GGCAGAAAGACCAGAAGAGCAGGCTGAAGCGTCGGG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCCCGACGCTTCAGCCTaGTCTTCTGGTCTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFPDASA*SSGLSA
Trigger: GGCAGAAAGACCAGAAGAGCAGGCTGAAGCGTCGGG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAGTCGGCTACGGGGGTaGTTCCATCAGTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSRLRG*FHQSHC
Trigger: ACAGTGAGACTGATGGAAGCACCCCCGTAGCCGACT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTAGTCGGCTACGGGGGTaGTTCCATCAGTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSSRLRG*FHQSHC
Trigger: ACAGTGAGACTGATGGAAGCACCCCCGTAGCCGACT...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCGTCTTTCTGGGTTGTaGCTGGTGCGTCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSRLSGL*LVRQSR
Trigger: CCGACTTTGACGCACCAGGCACAACCCAGAAAGACG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTACTGCTGACTTCCTTTaGCCCATCTATGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVTADFL*PIYDGH
Trigger: GTGCCCATCATAGATGGGGCAAAGGAAGTCAGCAGT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCACTGGTGTCGATTTTaGCTGACAGTCGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLHWCRF*LTVGPC
Trigger: ACAGGGCCCGACTGTCAGGCAAAATCGACACCAGTG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCAAGGCAGGAGCTTCTaGTGCAGCCGACTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSQGRSF*CSRLSA
Trigger: AGCTGAAAGTCGGCTGCAGCAGAAGCTCCTGCCTTG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACATTCCTCCACTGCTTaGCCAGATTCGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTHSSTA*PDSAGG
Trigger: TCCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCATTCCTCCACTGCTTaGCCAGATTCGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFHSSTA*PDSAGG
Trigger: TCCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCATTCCTCCACTGCTTaGCCAGATTCGGCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIHSSTA*PDSAGG
Trigger: TCCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCCACGGTGCTGACGTaGACTTCGGCCACAACCTCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSTVLT*TSATTS
Trigger: AGAGGTTGTGGCCGAAGTCCACGTCAGCACCGTGGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCCACGGTGCTGACGTaGACTTCGGCCACAACCTCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSTVLT*TSATTS
Trigger: AGAGGTTGTGGCCGAAGTCCACGTCAGCACCGTGGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTATCCACGGTGCTGACGTaGACTTCGGCCACAACCTCT +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVSTVLT*TSATTS
Trigger: AGAGGTTGTGGCCGAAGTCCACGTCAGCACCGTGGA...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCTTCACCAGCTCCTTaGCAGGTTCAGCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLASPAP*QVQLPE
Trigger: CTCAGGAAGCTGAACCTGCCAAGGAGCTGGTGAAGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCCCTTTTGCTCCTCCTaGCTGTCCGGAGAATCGGCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFPFCSS*LSGESA
Trigger: AGCCGATTCTCCGGACAGCCAGGAGGAGCAAAAGGG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCCTTTTGCTCCTCCTaGCTGTCCGGAGAATCGGCT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTPFCSS*LSGESA
Trigger: AGCCGATTCTCCGGACAGCCAGGAGGAGCAAAAGGG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCCCTTTTGCTCCTCCTaGCTGTCCGGAGAATCGGCT +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIPFCSS*LSGESA
Trigger: AGCCGATTCTCCGGACAGCCAGGAGGAGCAAAAGGG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTACCGGGTTCAGTGTCTaGAGTGGAATGTTCTACACC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVTGFSV*SGMFYT
Trigger: GGTGTAGAACATTCCACTCCAGACACTGAACCCGGT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTCGTTGGCCCCTGTTaGCCCTGCGTCTTCAACAGG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFFVGPC*PCVFNR
Trigger: CCTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTATTCGTTGGCCCCTGTTaGCCCTGCGTCTTCAACAGG +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVFVGPC*PCVFNR
Trigger: CCTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAA...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACAGAGTCATCTTCGTTaGCCCCTGTTGGCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTQSHLR*PLLALR
Trigger: ACGCAGGGCCAACAGGGGCCAACGAAGATGACTCTG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCAGAGTCATCTTCGTTaGCCCCTGTTGGCCCTGCGT +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIQSHLR*PLLALR
Trigger: ACGCAGGGCCAACAGGGGCCAACGAAGATGACTCTG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGAGTGGCCTCCTCTGTaGTGTCTGGGGAGTCGGTTA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLEWPPL*CLGSRL
Trigger: TAACCGACTCCCCAGACACCACAGAGGAGGCCACTC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTACAATCTCGTCTTTCTaGGTTGTGCCTGGTGCGTCA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVTISSF*VVPGAS
Trigger: TGACGCACCAGGCACAACCCAGAAAGACGAGATTGT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCTGTGCCCCCTGACTaGGTACCAGATGCGACCTCA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSVPPD*VPDATS
Trigger: TGAGGTCGCATCTGGTACCCAGTCAGGGGGCACAGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCCCTCTTCCTCAGATaGGAGGACGACCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSLFLR*EDDLFQ
Trigger: CTGGAAGAGGTCGTCCTCCCATCTGAGGAAGAGGGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTAAGGGACAGTTGGTaGCCCTCGGGATTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLRDSW*PSGFRV
Trigger: GACACGGAATCCCGAGGGCCACCAACTGTCCCTTAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359755.5
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCTGCCCATCATCTGTaGTGTCGTGAACAACCGCTG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTPAHHL*CREQPL
Trigger: CAGCGGTTGTTCACGACATCACAGATGATGGGCAGG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCTGCCCATCATCTGTaGTGTCGTGAACAACCGCTG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLPAHHL*CREQPL
Trigger: CAGCGGTTGTTCACGACATCACAGATGATGGGCAGG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCCTGCCCATCATCTGTaGTGTCGTGAACAACCGCTG +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIPAHHL*CREQPL
Trigger: CAGCGGTTGTTCACGACATCACAGATGATGGGCAGG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCTCCTTCGGCTTCCTaGAACTGGTCTTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTPPSAS*NWSFCA
Trigger: GGCGCAAAAAGACCAGTTTCAGGAAGCCGAAGGAGG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCCTCCTTCGGCTTCCTaGAACTGGTCTTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFPPSAS*NWSFCA
Trigger: GGCGCAAAAAGACCAGTTTCAGGAAGCCGAAGGAGG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACCTCCTTCGGCTTCCTaGAACTGGTCTTTTTGCGCC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVPPSAS*NWSFCA
Trigger: GGCGCAAAAAGACCAGTTTCAGGAAGCCGAAGGAGG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCACTGACTTGCTCCTCTaGGGGCAGCTCAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLTDLLL*GQLNFL
Trigger: GAGAAAGTTGAGCTGCCCTCAGAGGAGCAAGTCAGT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGGAGGAGACTTAGCGTaGCTCTGCAGTTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSGGDLA*LCSSRA
Trigger: TGCTCTTGAACTGCAGAGTCACGCTAAGTCTCCTCC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTCTCCCTTTCGACTTaGACTACCATCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFSLST*TTISLS
Trigger: GGAGAGAGAGATGGTAGTTCAAGTCGAAAGGGAGAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCCTGTGCAGAGGCCTaGGGTTCCTCTCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSCAEA*GSSPSF
Trigger: GAAAGAAGGAGAGGAACCTCAGGCCTCTGCACAGGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCCTGTGCAGAGGCCTaGGGTTCCTCTCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSCAEA*GSSPSF
Trigger: GAAAGAAGGAGAGGAACCTCAGGCCTCTGCACAGGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAGTATCAGCCAGGGCTaGGTTCTGGTTTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSISQG*VLVFRV
Trigger: GACCCTGAAAACCAGAACTCAGCCCTGGCTGATACT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGTATCAGCCAGGGCTaGGTTCTGGTTTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSISQG*VLVFRV
Trigger: GACCCTGAAAACCAGAACTCAGCCCTGGCTGATACT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCTTTCTTTGGATGCTaGTTCTCCAGCCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLAFFGC*FSSPKA
Trigger: AGCCTTGGGGCTGGAGAAGCAGCATCCAAAGAAAGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTTGCATTCCTCCACTaGTTGGCCAGATTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFAFLH*LARFGW
Trigger: CCAGCCGAATCTGGCCAAGCAGTGGAGGAATGCAAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTTGCATTCCTCCACTaGTTGGCCAGATTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFAFLH*LARFGW
Trigger: CCAGCCGAATCTGGCCAAGCAGTGGAGGAATGCAAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTCGGAGGCAACCTCTaGCTTTCCGTCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLGGNL*LSVFFC
Trigger: ACAGAAGAAGACGGAAAGGCAGAGGTTGCCTCCGAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTCCACCTCCGTTTTCTaGTCTTCGGTTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSTSVF*SSVLSS
Trigger: GGAGGAGAGAACCGAAGAGCAGAAAACGGAGGTGGA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCTGGCACAGACCCTaGTGTTTCTTCCACCTCCGT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSWHRP*CFFHLR
Trigger: ACGGAGGTGGAAGAAACAGCAGGGTCTGTGCCAGCT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAAGCTGGCACAGACCCTaGTGTTTCTTCCACCTCCGT +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVSWHRP*CFFHLR
Trigger: ACGGAGGTGGAAGAAACAGCAGGGTCTGTGCCAGCT...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCATTTCAGAGGCTGTaGTCTCGGTGGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLAFQRL*SRWKTR
Trigger: CCTTGTCTTCCACCGAGAGCACAGCCTCTGAAATGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTGAGGTATCCACCTTaGGCTTTGGTTCTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLRYPP*ALVLPA
Trigger: AGCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTGTGGTCTCCTCCCATTaGTTTTGGTCCCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIVVSSH*FWSPFL
Trigger: GAGGAAGGGGGACCAAAAGCAATGGGAGGAGACCAC...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGGGAGGAACTTCCCTaGCCTGGATCATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGEELP*PGSCSW
Trigger: CCAAGAACATGATCCAGGGCAGGGAAGTTCCTCCCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGGGAGGAACTTCCCTaGCCTGGATCATGTTCTTGG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGEELP*PGSCSW
Trigger: CCAAGAACATGATCCAGGGCAGGGAAGTTCCTCCCC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCCCGTCAGCGACAGCTaGTGCCATCATATGAACCTG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFPVSDS*CHHMNL
Trigger: CAGGTTCATATGATGGCAGCAGCTGTCGCTGACGGG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCCCGTCAGCGACAGCTaGTGCCATCATATGAACCTG +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIPVSDS*CHHMNL
Trigger: CAGGTTCATATGATGGCAGCAGCTGTCGCTGACGGG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTCAATAATGGTAGCTaGCCTCGTCCCGTCAGCGAC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFNNGS*PRPVSD
Trigger: GTCGCTGACGGGACGAGGGCAGCTACCATTATTGAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAGTCGGCTACGGGGGTaGTTCCATCAGTCTCACTGT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSRLRG*FHQSHC
Trigger: ACAGTGAGACTGATGGAAGCACCCCCGTAGCCGACT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACGTCTTTCTGGGTTGTaGCTGGTGCGTCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTRLSGL*LVRQSR
Trigger: CCGACTTTGACGCACCAGGCACAACCCAGAAAGACG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCGTCTTTCTGGGTTGTaGCTGGTGCGTCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFRLSGL*LVRQSR
Trigger: CCGACTTTGACGCACCAGGCACAACCCAGAAAGACG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACGTCTTTCTGGGTTGTaGCTGGTGCGTCAAAGTCGG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLRLSGL*LVRQSR
Trigger: CCGACTTTGACGCACCAGGCACAACCCAGAAAGACG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACACTGGTGTCGATTTTaGCTGACAGTCGGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTHWCRF*LTVGPC
Trigger: ACAGGGCCCGACTGTCAGGCAAAATCGACACCAGTG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGTGTTTCATCCTGTaGAGAGGCCTGAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSWCFIL*RGLRFL
Trigger: GAGGAACCTCAGGCCTCTGCACAGGATGAAACACCA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAAAGCTCCCCAAGCCTaGACTATGGCACATGCCCCA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLKAPQA*TMAHAP
Trigger: TGGGGCATGTGCCATAGTGCAGGCTTGGGGAGCTTT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTCAGGGCTCCTTTCTaGCCATTTAGGTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFRAPF*PFRSPS
Trigger: GGAGGGTGACCTAAATGGCCAGAAAGGAGCCCTGAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCAGGGCTCCTTTCTaGCCATTTAGGTCACCCTCC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFRAPF*PFRSPS
Trigger: GGAGGGTGACCTAAATGGCCAGAAAGGAGCCCTGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCGCTTTCTTTaGATGCTGCTTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSWVRFL*MLLLQP
Trigger: GGGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTGGGTTCGCTTTCTTTaGATGCTGCTTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSWVRFL*MLLLQP
Trigger: GGGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTGGCCAGATTCGGCTaGGGGAGAAATTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLARFG*GRNFCV
Trigger: CACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAACCAATTCTTCAGCTaGCACAGACCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVNQFFS*HRPCCF
Trigger: GAAACAGCAGGGTCTGTGCCAGCTGAAGAATTGGTT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGCTTCACCAGCTCCTTaGCAGGTTCAGCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTASPAP*QVQLPE
Trigger: CTCAGGAAGCTGAACCTGCCAAGGAGCTGGTGAAGC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCTTCACCAGCTCCTTaGCAGGTTCAGCTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLASPAP*QVQLPE
Trigger: CTCAGGAAGCTGAACCTGCCAAGGAGCTGGTGAAGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTGGTTCTTCCGGCTTTaGCTCTTCCACGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLWFFRL*LFHAPF
Trigger: AAAGGGAGCGTGGAAGAGCCAAAGCCGGAAGAACCA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGTTCTTCCGGCTTTaGCTCTTCCACGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSWFFRL*LFHAPF
Trigger: AAAGGGAGCGTGGAAGAGCCAAAGCCGGAAGAACCA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCCTGGATCATGTTCTTaGGAACCAGCAAGGATCCCG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSPGSCS*EPARIP
Trigger: CGGGATCCTTGCTGGTTCCCAAGAACATGATCCAGG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCACCAGACCCAGCTATaGAGTCTTCGCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVHQTQL*SLRFSL
Trigger: AAGAGAAAAGCGAAGACTCCATAGCTGGGTCTGGTG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGTTCAGTGTCTGGAGTaGAATGTTCTACACCAGACC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVVQCLE*NVLHQT
Trigger: GGTCTGGTGTAGAACATTCCACTCCAGACACTGAAC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTGGGGAGTCGGTTAACTaGGAGACTGCTGACACCATT +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSGESVN*ETADTI
Trigger: AATGGTGTCAGCAGTCTCCCAGTTAACCGACTCCCC...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTTCTGGGTTGTGCCTaGTGCGTCAAAGTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFLGCA*CVKVGY
Trigger: GTAGCCGACTTTGACGCACCAGGCACAACCCAGAAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTTTCTGGGTTGTGCCTaGTGCGTCAAAGTCGGCTAC +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSFLGCA*CVKVGY
Trigger: GTAGCCGACTTTGACGCACCAGGCACAACCCAGAAA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCTGGAACACAAAACTaGAAGGTGCTGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPGTQN*KVLEAS
Trigger: AGAGGCCTCCAGCACCTTCCAGTTTTGTGTTCCAGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCCTGGAACACAAAACTaGAAGGTGCTGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSPGTQN*KVLEAS
Trigger: AGAGGCCTCCAGCACCTTCCAGTTTTGTGTTCCAGG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCTCTCCACGGGGGATaGAGGAGACTTAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSLHGG*RRLSVT
Trigger: AGTCACGCTAAGTCTCCTCCATCCCCCGTGGAGAGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCTCTCCACGGGGGATaGAGGAGACTTAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSLHGG*RRLSVT
Trigger: AGTCACGCTAAGTCTCCTCCATCCCCCGTGGAGAGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCTCTCCACGGGGGATaGAGGAGACTTAGCGTGACT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSLHGG*RRLSVT
Trigger: AGTCACGCTAAGTCTCCTCCATCCCCCGTGGAGAGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGGCACATTCACTGTCTaGAGGAGCTGCTTACTGACC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSGTFTV*RSCLLT
Trigger: GGTCAGTAAGCAGCTCCTCCAGACAGTGAATGTGCC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTGGCACATTCACTGTCTaGAGGAGCTGCTTACTGACC +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSGTFTV*RSCLLT
Trigger: GGTCAGTAAGCAGCTCCTCCAGACAGTGAATGTGCC...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCACAGCATCTTCCCCTaGATGAGCGGCAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLHSIFP*MSGKVF
Trigger: GAAGACTTTGCCGCTCATCCAGGGGAAGATGCTGTG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTCACTTTGACCTCCTaGCAAGCAACCTGCTCATCG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLTLTS*QATCSS
Trigger: CGATGAGCAGGTTGCTTGCCAGGAGGTCAAAGTGAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCCTGTCCAGCGTCCTaGCTGTCAGCTTTTATCACG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSCPAS*LSAFIT
Trigger: CGTGATAAAAGCTGACAGCCAGGACGCTGGACAGGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTCCTGTCCAGCGTCCTaGCTGTCAGCTTTTATCACG +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSSCPAS*LSAFIT
Trigger: CGTGATAAAAGCTGACAGCCAGGACGCTGGACAGGA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCCCTCTTCCTCAGATaGGAGGACGACCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSLFLR*EDDLFQ
Trigger: CTGGAAGAGGTCGTCCTCCCATCTGAGGAAGAGGGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTATCCCTCTTCCTCAGATaGGAGGACGACCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVSLFLR*EDDLFQ
Trigger: CTGGAAGAGGTCGTCCTCCCATCTGAGGAAGAGGGA...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTATCTGGGGACTCTTTaGTTAAGCCTCCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVYLGTL*LSLLRH
Trigger: ATGCCTCAGGAGGCTTAACCAAAGAGTCCCCAGATA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTGATGGTGGACAGCTaGCCATTCTTCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLMVDS*PFFCRS
Trigger: GCTCCTACAGAAGAATGGTCAGCTGTCCACCATCAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTGATGGTGGACAGCTaGCCATTCTTCTGTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLMVDS*PFFCRS
Trigger: GCTCCTACAGAAGAATGGTCAGCTGTCCACCATCAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTGACTTGCTCCTCTaGGGGCAGCTCAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTDLLL*GQLNFL
Trigger: GAGAAAGTTGAGCTGCCCTCAGAGGAGCAAGTCAGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAACTGACTTGCTCCTCTaGGGGCAGCTCAACTTTCTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLTDLLL*GQLNFL
Trigger: GAGAAAGTTGAGCTGCCCTCAGAGGAGCAAGTCAGT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTACTGGTCAGCCTCTTaGGTCCCCTCAGTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFYWSAS*VPSVFD
Trigger: GTCAAAGACTGAGGGGACTCAAGAGGCTGACCAGTA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATACTGGTCAGCCTCTTaGGTCCCCTCAGTCTTTGAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLYWSAS*VPSVFD
Trigger: GTCAAAGACTGAGGGGACTCAAGAGGCTGACCAGTA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGAGGAGACTTAGCGTaGCTCTGCAGTTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGGDLA*LCSSRA
Trigger: TGCTCTTGAACTGCAGAGTCACGCTAAGTCTCCTCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGAGGAGACTTAGCGTaGCTCTGCAGTTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGGDLA*LCSSRA
Trigger: TGCTCTTGAACTGCAGAGTCACGCTAAGTCTCCTCC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACAGCCGCTGTTAGAGTaGATGATGCCTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLQPLLE*MMPQSS
Trigger: AGAGCTCTGAGGCATCATTCACTCTAACAGCGGCTG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCAGCCGCTGTTAGAGTaGATGATGCCTCAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFQPLLE*MMPQSS
Trigger: AGAGCTCTGAGGCATCATTCACTCTAACAGCGGCTG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAGTATCAGCCAGGGCTaGGTTCTGGTTTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSISQG*VLVFRV
Trigger: GACCCTGAAAACCAGAACTCAGCCCTGGCTGATACT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGTATCAGCCAGGGCTaGGTTCTGGTTTTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSISQG*VLVFRV
Trigger: GACCCTGAAAACCAGAACTCAGCCCTGGCTGATACT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCTGTGCTTGGGGTGTaGTCGCTTTATCTGATTCAC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPVLGV*SLYLIH
Trigger: GTGAATCAGATAAAGCGATCACACCCCAAGCACAGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGCCATGGCTTCCTCTaGACACACAAACCAGTGACA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGHGFL*THKPVT
Trigger: TGTCACTGGTTTGTGTGTTCAGAGGAAGCCATGGCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAGGCTGAGCTCATCTTaGTCAGCTACGCCATTGATG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLRLSSS*SATPLM
Trigger: CATCAATGGCGTAGCTGAGCAAGATGAGCTCAGCCT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCTTTCTTTGGATGCTaGTTCTCCAGCCCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLAFFGC*FSSPKA
Trigger: AGCCTTGGGGCTGGAGAAGCAGCATCCAAAGAAAGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCGCTTTCTTTGGATaGTGCTTCTCCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFAFFG*CFSSPK
Trigger: CTTGGGGCTGGAGAAGCAGCATCCAAAGAAAGCGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTTTTGCATTCCTCCACTaGTTGGCCAGATTCGGCTGG +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIFAFLH*LARFGW
Trigger: CCAGCCGAATCTGGCCAAGCAGTGGAGGAATGCAAA...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTCGGAGGCAACCTCTaGCTTTCCGTCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLGGNL*LSVFFC
Trigger: ACAGAAGAAGACGGAAAGGCAGAGGTTGCCTCCGAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTCGGAGGCAACCTCTaGCTTTCCGTCTTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLGGNL*LSVFFC
Trigger: ACAGAAGAAGACGGAAAGGCAGAGGTTGCCTCCGAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCCACCTCCGTTTTCTaGTCTTCGGTTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSTSVF*SSVLSS
Trigger: GGAGGAGAGAACCGAAGAGCAGAAAACGGAGGTGGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCCACCTCCGTTTTCTaGTCTTCGGTTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSTSVF*SSVLSS
Trigger: GGAGGAGAGAACCGAAGAGCAGAAAACGGAGGTGGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTTCCACCTCCGTTTTCTaGTCTTCGGTTCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVISTSVF*SSVLSS
Trigger: GGAGGAGAGAACCGAAGAGCAGAAAACGGAGGTGGA...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTTAGTGGACTTCCCTaGACCTTCATTCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFSGLP*TFILSC
Trigger: ACAGGAGAGAATGAAGGTGCAGGGAAGTCCACTAAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGCATTTCAGAGGCTGTaGTCTCGGTGGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFAFQRL*SRWKTR
Trigger: CCTTGTCTTCCACCGAGAGCACAGCCTCTGAAATGC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCATTTCAGAGGCTGTaGTCTCGGTGGAAGACAAGG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLAFQRL*SRWKTR
Trigger: CCTTGTCTTCCACCGAGAGCACAGCCTCTGAAATGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTGAGGTATCCACCTTaGGCTTTGGTTCTTCCGGCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLRYPP*ALVLPA
Trigger: AGCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGTCAGCGACAGCTGCTaGCATCATATGAACCTGACT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLVSDSC*HHMNLT
Trigger: AGTCAGGTTCATATGATGGCAGCAGCTGTCGCTGAC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCACTTTTTCTGCCACTaGCTGGAGGACCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLHFFCH*LEDLLS
Trigger: ACTCAAGAGGTCCTCCAGGCAGTGGCAGAAAAAGTG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCACAAAACTGGAAGGTaGTGGAGGCCTCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLHKTGR*WRPLFL
Trigger: CAGAAAGAGAGGCCTCCAGCACCTTCCAGTTTTGTG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCACAAAACTGGAAGGTaGTGGAGGCCTCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSHKTGR*WRPLFL
Trigger: CAGAAAGAGAGGCCTCCAGCACCTTCCAGTTTTGTG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTGGTGTTTCATCCTGTaGAGAGGCCTGAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFWCFIL*RGLRFL
Trigger: GAGGAACCTCAGGCCTCTGCACAGGATGAAACACCA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATGGTGTTTCATCCTGTaGAGAGGCCTGAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTWCFIL*RGLRFL
Trigger: GAGGAACCTCAGGCCTCTGCACAGGATGAAACACCA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTTGGTGTTTCATCCTGTaGAGAGGCCTGAGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIWCFIL*RGLRFL
Trigger: GAGGAACCTCAGGCCTCTGCACAGGATGAAACACCA...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAGCAGAACTAGGTATTaGCAACTCCAGTTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSRTRY*QLQFQV
Trigger: AACCTGGAACTGGAGTTGGCAATACCTAGTTCTGCT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCCAATATCATTAGCCTaGGACTCAGTGGGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVPISLA*DSVGCV
Trigger: AACACAACCCACTGAGTCCCAGGCTAATGATATTGG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATGGGTTCGCTTTCTTTaGATGCTGCTTCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTWVRFL*MLLLQP
Trigger: GGGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGGAGAAATTTCTGCGTaGCTTTGCTCACGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSGEISA*LCSRFR
Trigger: CCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGAGAAATTTCTGCGTaGCTTTGCTCACGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGEISA*LCSRFR
Trigger: CCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTGGCCAGATTCGGCTaGGGGAGAAATTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLARFG*GRNFCV
Trigger: CACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTGGCCAGATTCGGCTaGGGGAGAAATTTCTGCGTG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLARFG*GRNFCV
Trigger: CACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTGGTTCTTCCGGCTTTaGCTCTTCCACGCTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFWFFRL*LFHAPF
Trigger: AAAGGGAGCGTGGAAGAGCCAAAGCCGGAAGAACCA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCCACCTTGCGCTTTaGTTCTTCCGGCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFIHLAL*FFRLWL
Trigger: GAGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGAT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAATCCACCTTGCGCTTTaGTTCTTCCGGCTTTGGCTC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTIHLAL*FFRLWL
Trigger: GAGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGAT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTCATCAGCTTTCTGGTaGTCTCCTCCCATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSSAFW*SPPIAF
Trigger: AAAAGCAATGGGAGGAGACCACCAGAAAGCTGATGA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCTGGATCATGTTCTTaGGAACCAGCAAGGATCCCG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLPGSCS*EPARIP
Trigger: CGGGATCCTTGCTGGTTCCCAAGAACATGATCCAGG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGAACTTCCCTGCCCTaGATCATGTTCTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGTSLP*IMFLGT
Trigger: GGTTCCCAAGAACATGATCCAGGGCAGGGAAGTTCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGAACTTCCCTGCCCTaGATCATGTTCTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGTSLP*IMFLGT
Trigger: GGTTCCCAAGAACATGATCCAGGGCAGGGAAGTTCC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGACCGGGTTCAGTGTCTaGAGTGGAATGTTCTACACC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSTGFSV*SGMFYT
Trigger: GGTGTAGAACATTCCACTCCAGACACTGAACCCGGT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCACCGGGTTCAGTGTCTaGAGTGGAATGTTCTACACC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLTGFSV*SGMFYT
Trigger: GGTGTAGAACATTCCACTCCAGACACTGAACCCGGT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTCTTGTTTCCCATCTaGCCTTTTCTTCCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFLFPI*PFLPSS
Trigger: GGACGAAGGAAGAAAAGGCCAGATGGGAAACAAGAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGGGAGTCGGTTAACTaGGAGACTGCTGACACCATT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGESVN*ETADTI
Trigger: AATGGTGTCAGCAGTCTCCCAGTTAACCGACTCCCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTTTTCAAAGCTTTCTaGGGTGGTCTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFFKAF*GGLPHH
Trigger: GTGGTGGGGCAGACCACCCCAGAAAGCTTTGAAAAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTTTTCAAAGCTTTCTaGGGTGGTCTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFFKAF*GGLPHH
Trigger: GTGGTGGGGCAGACCACCCCAGAAAGCTTTGAAAAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTTCGGCTTGACAAGTaGTTACAAGCTCACTGGACT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFRLDK*LQAHWT
Trigger: AGTCCAGTGAGCTTGTAACCACTTGTCAAGCCGAAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCTGGAACACAAAACTaGAAGGTGCTGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLPGTQN*KVLEAS
Trigger: AGAGGCCTCCAGCACCTTCCAGTTTTGTGTTCCAGG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCCTGGAACACAAAACTaGAAGGTGCTGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFPGTQN*KVLEAS
Trigger: AGAGGCCTCCAGCACCTTCCAGTTTTGTGTTCCAGG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGCACATTCACTGTCTaGAGGAGCTGCTTACTGACC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGTFTV*RSCLLT
Trigger: GGTCAGTAAGCAGCTCCTCCAGACAGTGAATGTGCC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGCACATTCACTGTCTaGAGGAGCTGCTTACTGACC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGTFTV*RSCLLT
Trigger: GGTCAGTAAGCAGCTCCTCCAGACAGTGAATGTGCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACACAGCATCTTCCCCTaGATGAGCGGCAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLHSIFP*MSGKVF
Trigger: GAAGACTTTGCCGCTCATCCAGGGGAAGATGCTGTG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCACAGCATCTTCCCCTaGATGAGCGGCAAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFHSIFP*MSGKVF
Trigger: GAAGACTTTGCCGCTCATCCAGGGGAAGATGCTGTG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCCTGTCCAGCGTCCTaGCTGTCAGCTTTTATCACG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSCPAS*LSAFIT
Trigger: CGTGATAAAAGCTGACAGCCAGGACGCTGGACAGGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCCTGTCCAGCGTCCTaGCTGTCAGCTTTTATCACG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSCPAS*LSAFIT
Trigger: CGTGATAAAAGCTGACAGCCAGGACGCTGGACAGGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGCCAGGGCTGAGTTCTaGTTTTCAGGGTCATCAACA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSARAEF*FSGSST
Trigger: TGTTGATGACCCTGAAAACCAGAACTCAGCCCTGGC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCCAAGCCTGCACTATaGCACATGCCCCATCATATA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPKPAL*HMPHHI
Trigger: TATATGATGGGGCATGTGCCATAGTGCAGGCTTGGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGCAGGTTCAGCTTCCTaGGGTTCTGCATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFAGSAS*GSASIS
Trigger: TGAAATGGATGCAGAACCTCAGGAAGCTGAACCTGC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTGCAGGTTCAGCTTCCTaGGGTTCTGCATCCATTTCA +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIAGSAS*GSASIS
Trigger: TGAAATGGATGCAGAACCTCAGGAAGCTGAACCTGC...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACACCATCTTTTTGAATaGTGCCCAGGGAGTGACACC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTHHLFE*CPGSDT
Trigger: GGTGTCACTCCCTGGGCATCATTCAAAAAGATGGTG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACACCATCTTTTTGAATaGTGCCCAGGGAGTGACACC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLHHLFE*CPGSDT
Trigger: GGTGTCACTCCCTGGGCATCATTCAAAAAGATGGTG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCTTCCCAAGATACTaGGGTATCCACCTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSFPRY*GIHLAL
Trigger: AAGCGCAAGGTGGATACCTCAGTATCTTGGGAAGCT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAGCTTCCCAAGATACTaGGGTATCCACCTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSFPRY*GIHLAL
Trigger: AAGCGCAAGGTGGATACCTCAGTATCTTGGGAAGCT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGCTTCCCAAGATACTaGGGTATCCACCTTGCGCTT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSFPRY*GIHLAL
Trigger: AAGCGCAAGGTGGATACCTCAGTATCTTGGGAAGCT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTCAGTTTTTGCCTCCTaGGCATCTACTTTCAACACT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSVFAS*ASTFNT
Trigger: AGTGTTGAAAGTAGATGCTCAGGAGGCAAAAACTGA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTATGCTCTCTGTGACTTaGGGAGCTTTTTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVMLSVT*GAFSKL
Trigger: AAGCTTTGAAAAAGCTCCTCAAGTCACAGAGAGCAT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGCTAAGGTTTCGGCTTaGCAAGTGGTTACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSAKVSA*QVVTSS
Trigger: TGAGCTTGTAACCACTTGTCAAGCCGAAACCTTAGC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCTAAGGTTTCGGCTTaGCAAGTGGTTACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLAKVSA*QVVTSS
Trigger: TGAGCTTGTAACCACTTGTCAAGCCGAAACCTTAGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGATACAGTTTCCACTaGCACCTCTTTATCTGTATG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGYSFH*HLFICM
Trigger: CATACAGATAAAGAGGTGTCAGTGGAAACTGTATCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCTCCCTTTCGACTTaGACTACCATCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFSLST*TTISLS
Trigger: GGAGAGAGAGATGGTAGTTCAAGTCGAAAGGGAGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTCTCCCTTTCGACTTaGACTACCATCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFSLST*TTISLS
Trigger: GGAGAGAGAGATGGTAGTTCAAGTCGAAAGGGAGAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCTTTGCCCCATCTATaGTGGGCACATTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTPLPHL*WAHSLS
Trigger: AGACAGTGAATGTGCCCATCATAGATGGGGCAAAGG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCCTTTGCCCCATCTATaGTGGGCACATTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFPLPHL*WAHSLS
Trigger: AGACAGTGAATGTGCCCATCATAGATGGGGCAAAGG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCTTTGCCCCATCTATaGTGGGCACATTCACTGTCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLPLPHL*WAHSLS
Trigger: AGACAGTGAATGTGCCCATCATAGATGGGGCAAAGG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTCCTTCCAAACTGCTaGCTTCCTTTGCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFLPNC*LPLPHL
Trigger: TAGATGGGGCAAAGGAAGTCAGCAGTTTGGAAGGAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCATCTTCCCCTGGATaGGCGGCAAAGTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLASSPG*AAKSSF
Trigger: AAATGAAGACTTTGCCGCTCATCCAGGGGAAGATGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGCATCTTCCCCTGGATaGGCGGCAAAGTCTTCATTT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFASSPG*AAKSSF
Trigger: AAATGAAGACTTTGCCGCTCATCCAGGGGAAGATGC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATTGCTACACTCACTTTaGCCTCCTGGCAAGCAACCT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLLHSL*PPGKQP
Trigger: AGGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCACCTCTTCCAGCTGCTaGTCATTTACAGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLTSSSC*SFTVEP
Trigger: AGGTTCCACTGTAAATGATCAGCAGCTGGAAGAGGT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTGTGATCGCTTTATCTaGTTCACTGTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVCDRFI*FTVHFS
Trigger: GGAAAAGTGCACAGTGAATCAGATAAAGCGATCACA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCTGTGCTTGGGGTGTaGTCGCTTTATCTGATTCAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLPVLGV*SLYLIH
Trigger: GTGAATCAGATAAAGCGATCACACCCCAAGCACAGG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCGTGGGTTATATAACTaGGGCTTAAAGCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLRGLYN*GLKLPK
Trigger: CTTGGGGAGCTTTAAGCCTCAGTTATATAACCCACG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCGTGGGTTATATAACTaGGGCTTAAAGCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSRGLYN*GLKLPK
Trigger: CTTGGGGAGCTTTAAGCCTCAGTTATATAACCCACG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGCTGAGCTCATCTTaGTCAGCTACGCCATTGATG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFRLSSS*SATPLM
Trigger: CATCAATGGCGTAGCTGAGCAAGATGAGCTCAGCCT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTCGCTTTCTTTGGATaGTGCTTCTCCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFAFFG*CFSSPK
Trigger: CTTGGGGCTGGAGAAGCAGCATCCAAAGAAAGCGAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATTCGCTTTCTTTGGATaGTGCTTCTCCAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTFAFFG*CFSSPK
Trigger: CTTGGGGCTGGAGAAGCAGCATCCAAAGAAAGCGAA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAATTTCTGCGTGGCTTTaGTCACGCTTCAGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLISAWL*SRFRVS
Trigger: AGAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAAT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAGCTTCCTGAGGTTCTaGATCCATTTCAACCAATTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSFLRF*IHFNQF
Trigger: GAATTGGTTGAAATGGATGCAGAACCTCAGGAAGCT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGTCAGCGACAGCTGCTaGCATCATATGAACCTGACT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLVSDSC*HHMNLT
Trigger: AGTCAGGTTCATATGATGGCAGCAGCTGTCGCTGAC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACACTTTTTCTGCCACTaGCTGGAGGACCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLHFFCH*LEDLLS
Trigger: ACTCAAGAGGTCCTCCAGGCAGTGGCAGAAAAAGTG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACACTTTTTCTGCCACTaGCTGGAGGACCTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVHFFCH*LEDLLS
Trigger: ACTCAAGAGGTCCTCCAGGCAGTGGCAGAAAAAGTG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTCTTTCACTTTTTCTaGCACTGCCTGGAGGACCTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLFHFF*HCLEDL
Trigger: GAGGTCCTCCAGGCAGTGGCAGAAAAAGTGAAAGAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACTCTTTCACTTTTTCTaGCACTGCCTGGAGGACCTC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVLFHFF*HCLEDL
Trigger: GAGGTCCTCCAGGCAGTGGCAGAAAAAGTGAAAGAG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACACAAAACTGGAAGGTaGTGGAGGCCTCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTHKTGR*WRPLFL
Trigger: CAGAAAGAGAGGCCTCCAGCACCTTCCAGTTTTGTG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGACTGTCTGGAGGAGCTaGTTACTGACCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSTVWRS*LLTSSD
Trigger: ATCTGAAGAGGTCAGTAAGCAGCTCCTCCAGACAGT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCACTGTCTGGAGGAGCTaGTTACTGACCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLTVWRS*LLTSSD
Trigger: ATCTGAAGAGGTCAGTAAGCAGCTCCTCCAGACAGT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTGCTGACTTCCTTTaGCCCATCTATGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTADFL*PIYDGH
Trigger: GTGCCCATCATAGATGGGGCAAAGGAAGTCAGCAGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAACTGCTGACTTCCTTTaGCCCATCTATGATGGGCAC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVTADFL*PIYDGH
Trigger: GTGCCCATCATAGATGGGGCAAAGGAAGTCAGCAGT...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCCTGGCAAGCAACCTaGTCATCGACTTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSWQAT*SSTSSD
Trigger: GTCAGATGAAGTCGATGAGCAGGTTGCTTGCCAGGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCCTGGCAAGCAACCTaGTCATCGACTTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSWQAT*SSTSSD
Trigger: GTCAGATGAAGTCGATGAGCAGGTTGCTTGCCAGGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTATCCTGGCAAGCAACCTaGTCATCGACTTCATCTGAC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVSWQAT*SSTSSD
Trigger: GTCAGATGAAGTCGATGAGCAGGTTGCTTGCCAGGA...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTGCACTATGGCACATaGCCCATCATATACTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLHYGT*PIIYCV
Trigger: CACACAGTATATGATGGGGCATGTGCCATAGTGCAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGTCCGAGTCCCCATTTaGTTTCCTGCAGATTGTGTT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSVRVPI*FPADCV
Trigger: AACACAATCTGCAGGAAAGCAAATGGGGACTCGGAC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCACAGAATGTCTTCCTaGCATAGAGAGGAAGTCAAT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVHRMSS*HREEVN
Trigger: ATTGACTTCCTCTCTATGGCAGGAAGACATTCTGTG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCACAGTGAGTAGCTaGACAGTGTCAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFTVSS*TVSGFS
Trigger: AGAGAAGCCTGACACTGTCCAGCTACTCACTGTGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGAGAAATTTCTGCGTaGCTTTGCTCACGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGEISA*LCSRFR
Trigger: CCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTGGAGAAATTTCTGCGTaGCTTTGCTCACGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIGEISA*LCSRFR
Trigger: CCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCC...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAACCAATTCTTCAGCTaGCACAGACCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSNQFFS*HRPCCF
Trigger: GAAACAGCAGGGTCTGTGCCAGCTGAAGAATTGGTT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAACCAATTCTTCAGCTaGCACAGACCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLNQFFS*HRPCCF
Trigger: GAAACAGCAGGGTCTGTGCCAGCTGAAGAATTGGTT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGTTCAGTGTCTGGAGTaGAATGTTCTACACCAGACC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSVQCLE*NVLHQT
Trigger: GGTCTGGTGTAGAACATTCCACTCCAGACACTGAAC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTTTTCAAAGCTTTCTaGGGTGGTCTGCCCCACCAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFFKAF*GGLPHH
Trigger: GTGGTGGGGCAGACCACCCCAGAAAGCTTTGAAAAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACAATCTCGTCTTTCTaGGTTGTGCCTGGTGCGTCA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTISSF*VVPGAS
Trigger: TGACGCACCAGGCACAACCCAGAAAGACGAGATTGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAACAATCTCGTCTTTCTaGGTTGTGCCTGGTGCGTCA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLTISSF*VVPGAS
Trigger: TGACGCACCAGGCACAACCCAGAAAGACGAGATTGT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTACAATCTCGTCTTTCTaGGTTGTGCCTGGTGCGTCA +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVITISSF*VVPGAS
Trigger: TGACGCACCAGGCACAACCCAGAAAGACGAGATTGT...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTACCTCATTCTCCTCATaGATTTCCACAATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVTSFSS*ISTISS
Trigger: AGACGAGATTGTGGAAATCCATGAGGAGAATGAGGT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTCATTCACATGGGTTaGCTCTGCTTCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFIHMG*LCFCFL
Trigger: GAGAAAACAGAAGCAGAGCCAACCCATGTGAATGAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAGCAGATACTATCACTaGTGTCGATTTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSRYYH*CRFCLT
Trigger: TGTCAGGCAAAATCGACACCAGTGATAGTATCTGCT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTCTGTACGTACAAACTaGTCAACGGCTGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSSVRTN*STAVWM
Trigger: CATCCAGACAGCCGTTGACCAGTTTGTACGTACAGA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGCTGATCATTTACAGTaGAACCTTCTACCTCAACAG +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVADHLQ*NLLPQQ
Trigger: CTGTTGAGGTAGAAGGTTCCACTGTAAATGATCAGC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCCAGGGCTGAGTTCTaGTTTTCAGGGTCATCAACA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLARAEF*FSGSST
Trigger: TGTTGATGACCCTGAAAACCAGAACTCAGCCCTGGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTATCTGGGGACTCTTTaGTTAAGCCTCCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLYLGTL*LSLLRH
Trigger: ATGCCTCAGGAGGCTTAACCAAAGAGTCCCCAGATA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCCCAAGCCTGCACTATaGCACATGCCCCATCATATA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFPKPAL*HMPHHI
Trigger: TATATGATGGGGCATGTGCCATAGTGCAGGCTTGGG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCATCTGTGATGTCGTaGACAACCGCTGACTTAGTA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSSVMS*TTADLV
Trigger: TACTAAGTCAGCGGTTGTTCACGACATCACAGATGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTCATCTGTGATGTCGTaGACAACCGCTGACTTAGTA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSSVMS*TTADLV
Trigger: TACTAAGTCAGCGGTTGTTCACGACATCACAGATGA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACATCTTTCTTCACAGTaGGTAGCTGGACAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLHLSSQ*VAGQCQ
Trigger: CTGACACTGTCCAGCTACTCACTGTGAAGAAAGATG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCATCTTTCTTCACAGTaGGTAGCTGGACAGTGTCAG +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIHLSSQ*VAGQCQ
Trigger: CTGACACTGTCCAGCTACTCACTGTGAAGAAAGATG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAAGAGGTTCTGTCACTaGAGCAGATATCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLKRFCH*SRYPRR
Trigger: CCTTCTTGGATATCTGCTTCAGTGACAGAACCTCTT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAAGAGGTTCTGTCACTaGAGCAGATATCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSKRFCH*SRYPRR
Trigger: CCTTCTTGGATATCTGCTTCAGTGACAGAACCTCTT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGCTAAGGTTTCGGCTTaGCAAGTGGTTACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTAKVSA*QVVTSS
Trigger: TGAGCTTGTAACCACTTGTCAAGCCGAAACCTTAGC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGCTAAGGTTTCGGCTTaGCAAGTGGTTACAAGCTCA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFAKVSA*QVVTSS
Trigger: TGAGCTTGTAACCACTTGTCAAGCCGAAACCTTAGC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAGTCCCCTCAGTCTTTaGCAGAATGGATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSPLSL*QNGYSF
Trigger: GAAACTGTATCCATTCTGTCAAAGACTGAGGGGACT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGTCCCCTCAGTCTTTaGCAGAATGGATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSPLSL*QNGYSF
Trigger: GAAACTGTATCCATTCTGTCAAAGACTGAGGGGACT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATTCTCCCTTTCGACTTaGACTACCATCTCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTFSLST*TTISLS
Trigger: GGAGAGAGAGATGGTAGTTCAAGTCGAAAGGGAGAA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTCCTTCCAAACTGCTaGCTTCCTTTGCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFFLPNC*LPLPHL
Trigger: TAGATGGGGCAAAGGAAGTCAGCAGTTTGGAAGGAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTCCTTCCAAACTGCTaGCTTCCTTTGCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFLPNC*LPLPHL
Trigger: TAGATGGGGCAAAGGAAGTCAGCAGTTTGGAAGGAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATTCCTTCCAAACTGCTaGCTTCCTTTGCCCCATCTA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTFLPNC*LPLPHL
Trigger: TAGATGGGGCAAAGGAAGTCAGCAGTTTGGAAGGAA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCAACGGCTGTCTGGATaGTGTTTTGGACAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSQRLSG*CFGQVY
Trigger: GTAAACTTGTCCAAAACATCATCCAGACAGCCGTTG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCAACGGCTGTCTGGATaGTGTTTTGGACAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLQRLSG*CFGQVY
Trigger: GTAAACTTGTCCAAAACATCATCCAGACAGCCGTTG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAACCTCTTCCAGCTGCTaGTCATTTACAGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTTSSSC*SFTVEP
Trigger: AGGTTCCACTGTAAATGATCAGCAGCTGGAAGAGGT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAACCTCTTCCAGCTGCTaGTCATTTACAGTGGAACCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLTSSSC*SFTVEP
Trigger: AGGTTCCACTGTAAATGATCAGCAGCTGGAAGAGGT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACGTGGGTTATATAACTaGGGCTTAAAGCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLRGLYN*GLKLPK
Trigger: CTTGGGGAGCTTTAAGCCTCAGTTATATAACCCACG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCGTGGGTTATATAACTaGGGCTTAAAGCTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIRGLYN*GLKLPK
Trigger: CTTGGGGAGCTTTAAGCCTCAGTTATATAACCCACG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTTAGTGGACTTCCCTaGACCTTCATTCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFSGLP*TFILSC
Trigger: ACAGGAGAGAATGAAGGTGCAGGGAAGTCCACTAAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAACTGTCTGGAGGAGCTaGTTACTGACCTCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLTVWRS*LLTSSD
Trigger: ATCTGAAGAGGTCAGTAAGCAGCTCCTCCAGACAGT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGCAGAACTAGGTATTaGCAACTCCAGTTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSRTRY*QLQFQV
Trigger: AACCTGGAACTGGAGTTGGCAATACCTAGTTCTGCT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTGCACTATGGCACATaGCCCATCATATACTGTGTG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLHYGT*PIIYCV
Trigger: CACACAGTATATGATGGGGCATGTGCCATAGTGCAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACTGCACTATGGCACATaGCCCATCATATACTGTGTG +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVLHYGT*PIIYCV
Trigger: CACACAGTATATGATGGGGCATGTGCCATAGTGCAG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGATCTGGAAAGCTATATaGCAGGCCAGTTCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSIWKAI*QASSVC
Trigger: ACACACAGAACTGGCCTGGCATATAGCTTTCCAGAT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCAATATCATTAGCCTaGGACTCAGTGGGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPISLA*DSVGCV
Trigger: AACACAACCCACTGAGTCCCAGGCTAATGATATTGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTCACAGTGAGTAGCTaGACAGTGTCAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFFTVSS*TVSGFS
Trigger: AGAGAAGCCTGACACTGTCCAGCTACTCACTGTGAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTTTCACAGTGAGTAGCTaGACAGTGTCAGGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIFTVSS*TVSGFS
Trigger: AGAGAAGCCTGACACTGTCCAGCTACTCACTGTGAA...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAACCAATTCTTCAGCTaGCACAGACCCTGCTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLNQFFS*HRPCCF
Trigger: GAAACAGCAGGGTCTGTGCCAGCTGAAGAATTGGTT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCATCAGCTTTCTGGTaGTCTCCTCCCATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSSAFW*SPPIAF
Trigger: AAAAGCAATGGGAGGAGACCACCAGAAAGCTGATGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCACCAGACCCAGCTATaGAGTCTTCGCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFHQTQL*SLRFSL
Trigger: AAGAGAAAAGCGAAGACTCCATAGCTGGGTCTGGTG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACACCAGACCCAGCTATaGAGTCTTCGCTTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTHQTQL*SLRFSL
Trigger: AAGAGAAAAGCGAAGACTCCATAGCTGGGTCTGGTG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAGTTCAGTGTCTGGAGTaGAATGTTCTACACCAGACC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVVQCLE*NVLHQT
Trigger: GGTCTGGTGTAGAACATTCCACTCCAGACACTGAAC...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCTTGTTTCCCATCTaGCCTTTTCTTCCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFLFPI*PFLPSS
Trigger: GGACGAAGGAAGAAAAGGCCAGATGGGAAACAAGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCAGTCTTTGACAGAATaGATACAGTTTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVQSLTE*IQFPLT
Trigger: TGTCAGTGGAAACTGTATCCATTCTGTCAAAGACTG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTCCACTTCAGTGATGTaGTTTTCTCTCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSTSVM*FSLLPG
Trigger: ACCTGGAAGGAGAGAAAACCACATCACTGAAGTGGA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCCACTTCAGTGATGTaGTTTTCTCTCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSTSVM*FSLLPG
Trigger: ACCTGGAAGGAGAGAAAACCACATCACTGAAGTGGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTGGTCAACGGCTGTCTaGATGATGTTTTGGACAAGT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLWSTAV*MMFWTS
Trigger: ACTTGTCCAAAACATCATCCAGACAGCCGTTGACCA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCTGTACGTACAAACTaGTCAACGGCTGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSVRTN*STAVWM
Trigger: CATCCAGACAGCCGTTGACCAGTTTGTACGTACAGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCTGTACGTACAAACTaGTCAACGGCTGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSVRTN*STAVWM
Trigger: CATCCAGACAGCCGTTGACCAGTTTGTACGTACAGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTCTACCTCAACAGTCATaGTCTTTTCTGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSLPQQS*SFLRLH
Trigger: GTGAAGCCTCAGAAAAGACCATGACTGTTGAGGTAG...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATATCTGGGGACTCTTTaGTTAAGCCTCCTGAGGCAT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLYLGTL*LSLLRH
Trigger: ATGCCTCAGGAGGCTTAACCAAAGAGTCCCCAGATA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAACTCCTCCTGTGCTTaGGGTGTGATCGCTTTATCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFNSSCA*GVIALS
Trigger: AGATAAAGCGATCACACCCCAAGCACAGGAGGAGTT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAACTCCTCCTGTGCTTaGGGTGTGATCGCTTTATCT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTNSSCA*GVIALS
Trigger: AGATAAAGCGATCACACCCCAAGCACAGGAGGAGTT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAACTCCTCCTGTGCTTaGGGTGTGATCGCTTTATCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLNSSCA*GVIALS
Trigger: AGATAAAGCGATCACACCCCAAGCACAGGAGGAGTT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAAAGCTATCTCGGCCATaGCTTCCTCTGAACACACAA +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVKLSRP*LPLNTQ
Trigger: TTGTGTGTTCAGAGGAAGCCATGGCCGAGATAGCTT...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTTCATCTGTGATGTCGTaGACAACCGCTGACTTAGTA +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVISSVMS*TTADLV
Trigger: TACTAAGTCAGCGGTTGTTCACGACATCACAGATGA...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAGAGGTTCTGTCACTaGAGCAGATATCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFKRFCH*SRYPRR
Trigger: CCTTCTTGGATATCTGCTTCAGTGACAGAACCTCTT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAAGAGGTTCTGTCACTaGAGCAGATATCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLKRFCH*SRYPRR
Trigger: CCTTCTTGGATATCTGCTTCAGTGACAGAACCTCTT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCAGTTTTTGCCTCCTaGGCATCTACTTTCAACACT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSVFAS*ASTFNT
Trigger: AGTGTTGAAAGTAGATGCTCAGGAGGCAAAAACTGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCATGCTCTCTGTGACTTaGGGAGCTTTTTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLMLSVT*GAFSKL
Trigger: AAGCTTTGAAAAAGCTCCTCAAGTCACAGAGAGCAT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGACTCTATGCTCTCTGTaGCTTGAGGAGCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSTLCSL*LEELFQ
Trigger: TTGAAAAAGCTCCTCAAGTCACAGAGAGCATAGAGT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGATACAGTTTCCACTaGCACCTCTTTATCTGTATG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGYSFH*HLFICM
Trigger: CATACAGATAAAGAGGTGTCAGTGGAAACTGTATCC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGTCCCCTCAGTCTTTaGCAGAATGGATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSPLSL*QNGYSF
Trigger: GAAACTGTATCCATTCTGTCAAAGACTGAGGGGACT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTAGTCCCCTCAGTCTTTaGCAGAATGGATACAGTTTC +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVISPLSL*QNGYSF
Trigger: GAAACTGTATCCATTCTGTCAAAGACTGAGGGGACT...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCAACGGCTGTCTGGATaGTGTTTTGGACAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFQRLSG*CFGQVY
Trigger: GTAAACTTGTCCAAAACATCATCCAGACAGCCGTTG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACAACGGCTGTCTGGATaGTGTTTTGGACAAGTTTAC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVQRLSG*CFGQVY
Trigger: GTAAACTTGTCCAAAACATCATCCAGACAGCCGTTG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTGTGATCGCTTTATCTaGTTCACTGTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLCDRFI*FTVHFS
Trigger: GGAAAAGTGCACAGTGAATCAGATAAAGCGATCACA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCGTGTAATAGGAAAGTaGCCAATTTCAGAGTACCAC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLRVIGK*PISEYH
Trigger: GTGGTACTCTGAAATTGGTCACTTTCCTATTACACG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGACTAGTCGGAGATTCTaGAGACTTGCTAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSTSRRF*RLARFF
Trigger: AAAGAACCTAGCAAGTCTGCAGAATCTCCGACTAGT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGCTTCCTGAGGTTCTaGATCCATTTCAACCAATTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSFLRF*IHFNQF
Trigger: GAATTGGTTGAAATGGATGCAGAACCTCAGGAAGCT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTTAGTGGACTTCCCTaGACCTTCATTCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFFSGLP*TFILSC
Trigger: ACAGGAGAGAATGAAGGTGCAGGGAAGTCCACTAAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTTAGTGGACTTCCCTaGACCTTCATTCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFSGLP*TFILSC
Trigger: ACAGGAGAGAATGAAGGTGCAGGGAAGTCCACTAAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTGAACTTGAATTTTGGTaGATACTGCCTCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSELEFW*ILPPLD
Trigger: GTCAAGAGGAGGCAGTATGCACCAAAATTCAAGTTC...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAGCAGAACTAGGTATTaGCAACTCCAGTTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSRTRY*QLQFQV
Trigger: AACCTGGAACTGGAGTTGGCAATACCTAGTTCTGCT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCATGCCATGTGTGAATaGAGTCCAGCATATAAGAGT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLHAMCE*SPAYKS
Trigger: ACTCTTATATGCTGGACTGCATTCACACATGGCATG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCAATATCATTAGCCTaGGACTCAGTGGGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLPISLA*DSVGCV
Trigger: AACACAACCCACTGAGTCCCAGGCTAATGATATTGG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGCCACAACCTCTTCTTaGTGGACTTCTATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSATTSS*WTSIFS
Trigger: TGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCCACAACCTCTTCTTaGTGGACTTCTATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLATTSS*WTSIFS
Trigger: TGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCATCAGCTTTCTGGTaGTCTCCTCCCATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSSAFW*SPPIAF
Trigger: AAAAGCAATGGGAGGAGACCACCAGAAAGCTGATGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCATCAGCTTTCTGGTaGTCTCCTCCCATTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSSAFW*SPPIAF
Trigger: AAAAGCAATGGGAGGAGACCACCAGAAAGCTGATGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTCTTGTTTCCCATCTaGCCTTTTCTTCCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFFLFPI*PFLPSS
Trigger: GGACGAAGGAAGAAAAGGCCAGATGGGAAACAAGAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTCTTGTTTCCCATCTaGCCTTTTCTTCCTTCGTCC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFLFPI*PFLPSS
Trigger: GGACGAAGGAAGAAAAGGCCAGATGGGAAACAAGAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTTCGGCTTGACAAGTaGTTACAAGCTCACTGGACT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFRLDK*LQAHWT
Trigger: AGTCCAGTGAGCTTGTAACCACTTGTCAAGCCGAAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCATTCACATGGGTTaGCTCTGCTTCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFIHMG*LCFCFL
Trigger: GAGAAAACAGAAGCAGAGCCAACCCATGTGAATGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTCATTCACATGGGTTaGCTCTGCTTCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFIHMG*LCFCFL
Trigger: GAGAAAACAGAAGCAGAGCCAACCCATGTGAATGAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCCACTTCAGTGATGTaGTTTTCTCTCCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSTSVM*FSLLPG
Trigger: ACCTGGAAGGAGAGAAAACCACATCACTGAAGTGGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCACGTCAACATTTCGGTaGCTGTTTCTTCTGTACGTA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLTSTFR*LFLLYV
Trigger: TACGTACAGAAGAAACAGCCACCGAAATGTTGACGT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGACGTCAACATTTCGGTaGCTGTTTCTTCTGTACGTA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSTSTFR*LFLLYV
Trigger: TACGTACAGAAGAAACAGCCACCGAAATGTTGACGT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTACCTCAACAGTCATaGTCTTTTCTGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLPQQS*SFLRLH
Trigger: GTGAAGCCTCAGAAAAGACCATGACTGTTGAGGTAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTACCTCAACAGTCATaGTCTTTTCTGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLPQQS*SFLRLH
Trigger: GTGAAGCCTCAGAAAAGACCATGACTGTTGAGGTAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTACCTCAACAGTCATaGTCTTTTCTGAGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLPQQS*SFLRLH
Trigger: GTGAAGCCTCAGAAAAGACCATGACTGTTGAGGTAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCTGATCATTTACAGTaGAACCTTCTACCTCAACAG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLADHLQ*NLLPQQ
Trigger: CTGTTGAGGTAGAAGGTTCCACTGTAAATGATCAGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTAGAAACCAGCACTTaGATTTCAATCTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLETST*ISISVG
Trigger: GCCAACTGAGATTGAAATCCAAGTGCTGGTTTCTAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCAGTTTTTGCCTCCTaGGCATCTACTTTCAACACT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSVFAS*ASTFNT
Trigger: AGTGTTGAAAGTAGATGCTCAGGAGGCAAAAACTGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTTCAGTTTTTGCCTCCTaGGCATCTACTTTCAACACT +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVISVFAS*ASTFNT
Trigger: AGTGTTGAAAGTAGATGCTCAGGAGGCAAAAACTGA...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATGCTCTCTGTGACTTaGGGAGCTTTTTCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFMLSVT*GAFSKL
Trigger: AAGCTTTGAAAAAGCTCCTCAAGTCACAGAGAGCAT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTCTATGCTCTCTGTaGCTTGAGGAGCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTLCSL*LEELFQ
Trigger: TTGAAAAAGCTCCTCAAGTCACAGAGAGCATAGAGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAACTCTATGCTCTCTGTaGCTTGAGGAGCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLTLCSL*LEELFQ
Trigger: TTGAAAAAGCTCCTCAAGTCACAGAGAGCATAGAGT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAACTCTATGCTCTCTGTaGCTTGAGGAGCTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVTLCSL*LEELFQ
Trigger: TTGAAAAAGCTCCTCAAGTCACAGAGAGCATAGAGT...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGATACAGTTTCCACTaGCACCTCTTTATCTGTATG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGYSFH*HLFICM
Trigger: CATACAGATAAAGAGGTGTCAGTGGAAACTGTATCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATGTGATCGCTTTATCTaGTTCACTGTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLCDRFI*FTVHFS
Trigger: GGAAAAGTGCACAGTGAATCAGATAAAGCGATCACA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTGTGATCGCTTTATCTaGTTCACTGTGCACTTTTCC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFCDRFI*FTVHFS
Trigger: GGAAAAGTGCACAGTGAATCAGATAAAGCGATCACA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGAAATGAGATCAGTTaGTGTGCCTGCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTRNEIS*CACSPI
Trigger: AATTGGAGAGCAGGCACATCAACTGATCTCATTTCT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAGAAATGAGATCAGTTaGTGTGCCTGCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLRNEIS*CACSPI
Trigger: AATTGGAGAGCAGGCACATCAACTGATCTCATTTCT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACGTGTAATAGGAAAGTaGCCAATTTCAGAGTACCAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLRVIGK*PISEYH
Trigger: GTGGTACTCTGAAATTGGTCACTTTCCTATTACACG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGAACACACAAACCAGTaGCAAGGGGTTTCATGTAAT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLEHTNQ*QGVSCN
Trigger: ATTACATGAAACCCCTTGTCACTGGTTTGTGTGTTC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTACACTATTCTTCGTGTaGCAATTGTCTGACAAAACC +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSTLFFV*QLSDKT
Trigger: GGTTTTGTCAGACAATTGTCACACGAAGAATAGTGT...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTGGAGTACCAAGTTTaGGTAAAATCTGGAAAGCTA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLEYQV*VKSGKL
Trigger: TAGCTTTCCAGATTTTACTCAAACTTGGTACTCCAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTAAAATTTCCAGCCCTTaGCTATCTGTAGTTCCAAAC +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSKISSP*LSVVPN
Trigger: GTTTGGAACTACAGATAGTCAAGGGCTGGAAATTTT...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTAGTCGGAGATTCTaGAGACTTGCTAGGTTCTTT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTSRRF*RLARFF
Trigger: AAAGAACCTAGCAAGTCTGCAGAATCTCCGACTAGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCTTCCTGAGGTTCTaGATCCATTTCAACCAATTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSFLRF*IHFNQF
Trigger: GAATTGGTTGAAATGGATGCAGAACCTCAGGAAGCT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCACCTCTTTATCTGTATaGTCTAGAGTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLTSLSV*SRVSSI
Trigger: GATGGAAGACACTCTAGAGCATACAGATAAAGAGGT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGACCTCTTTATCTGTATaGTCTAGAGTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSTSLSV*SRVSSI
Trigger: GATGGAAGACACTCTAGAGCATACAGATAAAGAGGT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGTAACAGCTGTTTCGTaGTCAAGCTTCTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFVTAVS*SSFSSF
Trigger: GAATGAAGAGAAGCTTGAGCACGAAACAGCTGTTAC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGTAACAGCTGTTTCGTaGTCAAGCTTCTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLVTAVS*SSFSSF
Trigger: GAATGAAGAGAAGCTTGAGCACGAAACAGCTGTTAC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTGTAACAGCTGTTTCGTaGTCAAGCTTCTCTTCATTC +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIVTAVS*SSFSSF
Trigger: GAATGAAGAGAAGCTTGAGCACGAAACAGCTGTTAC...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGAACTTGAATTTTGGTaGATACTGCCTCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFELEFW*ILPPLD
Trigger: GTCAAGAGGAGGCAGTATGCACCAAAATTCAAGTTC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGAACTTGAATTTTGGTaGATACTGCCTCCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLELEFW*ILPPLD
Trigger: GTCAAGAGGAGGCAGTATGCACCAAAATTCAAGTTC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACATGCCATGTGTGAATaGAGTCCAGCATATAAGAGT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLHAMCE*SPAYKS
Trigger: ACTCTTATATGCTGGACTGCATTCACACATGGCATG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCATGCCATGTGTGAATaGAGTCCAGCATATAAGAGT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFHAMCE*SPAYKS
Trigger: ACTCTTATATGCTGGACTGCATTCACACATGGCATG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGCCACAACCTCTTCTTaGTGGACTTCTATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFATTSS*WTSIFS
Trigger: TGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGCCACAACCTCTTCTTaGTGGACTTCTATTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTATTSS*WTSIFS
Trigger: TGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCTCATTCTCCTCATaGATTTCCACAATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTSFSS*ISTISS
Trigger: AGACGAGATTGTGGAAATCCATGAGGAGAATGAGGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAACCTCATTCTCCTCATaGATTTCCACAATCTCGTCT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTTSFSS*ISTISS
Trigger: AGACGAGATTGTGGAAATCCATGAGGAGAATGAGGT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATTCATTCACATGGGTTaGCTCTGCTTCTGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTFIHMG*LCFCFL
Trigger: GAGAAAACAGAAGCAGAGCCAACCCATGTGAATGAA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGCAGATACTATCACTaGTGTCGATTTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSRYYH*CRFCLT
Trigger: TGTCAGGCAAAATCGACACCAGTGATAGTATCTGCT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCAGATACTATCACTaGTGTCGATTTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSRYYH*CRFCLT
Trigger: TGTCAGGCAAAATCGACACCAGTGATAGTATCTGCT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAACGTCAACATTTCGGTaGCTGTTTCTTCTGTACGTA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLTSTFR*LFLLYV
Trigger: TACGTACAGAAGAAACAGCCACCGAAATGTTGACGT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAACGTCAACATTTCGGTaGCTGTTTCTTCTGTACGTA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTTSTFR*LFLLYV
Trigger: TACGTACAGAAGAAACAGCCACCGAAATGTTGACGT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGCTGATCATTTACAGTaGAACCTTCTACCTCAACAG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLADHLQ*NLLPQQ
Trigger: CTGTTGAGGTAGAAGGTTCCACTGTAAATGATCAGC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGCTGATCATTTACAGTaGAACCTTCTACCTCAACAG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTADHLQ*NLLPQQ
Trigger: CTGTTGAGGTAGAAGGTTCCACTGTAAATGATCAGC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTGGGAAAATTGTAGGTTaGTCTTGGAAAGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSGKIVG*SWKEEM
Trigger: CATTTCCTCTTTCCAAGACCAACCTACAATTTTCCC...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCAATTCTCAAAGTTCTaGAATACTGGTCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSQFSKF*NTGLQS
Trigger: AGACTGAAGACCAGTATTTCAGAACTTTGAGAATTG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCAAGAACGTCAATCTaGAAAGCTACTGGTTTATTT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLARTSI*KATGLF
Trigger: AAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCAAGAGTAGATAAGTaGCACTATTCTTCGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSRVDK*HYSSCD
Trigger: GTCACACGAAGAATAGTGTCACTTATCTACTCTTGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTATTACAAGAAGTGGTaGGAGTTTACAAGTCTTGCA +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSYYKKW*EFTSLA
Trigger: TGCAAGACTTGTAAACTCTCACCACTTCTTGTAATA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACCTCTTTATCTGTATaGTCTAGAGTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTSLSV*SRVSSI
Trigger: GATGGAAGACACTCTAGAGCATACAGATAAAGAGGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAACCTCTTTATCTGTATaGTCTAGAGTGTCTTCCATC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVTSLSV*SRVSSI
Trigger: GATGGAAGACACTCTAGAGCATACAGATAAAGAGGT...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTTGGACAAGTTTACTaGTTTTGGTCTCAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLFGQVY*FWSQVP
Trigger: TGGAACTTGAGACCAAAAGCAGTAAACTTGTCCAAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTATCTGATTCACTGTaGACTTTTCCTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLSDSL*TFPSCN
Trigger: ATTGCAGGAAGGAAAAGTGCACAGTGAATCAGATAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTATCTGATTCACTGTaGACTTTTCCTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLSDSL*TFPSCN
Trigger: ATTGCAGGAAGGAAAAGTGCACAGTGAATCAGATAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGACATATTCACTACTTTaGCTCAGGATTAAGCACACT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSTYSLL*LRIKHT
Trigger: AGTGTGCTTAATCCTGAGGCAAAGTAGTGAATATGT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCACATATTCACTACTTTaGCTCAGGATTAAGCACACT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLTYSLL*LRIKHT
Trigger: AGTGTGCTTAATCCTGAGGCAAAGTAGTGAATATGT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACAAAATGTAGGCACTTaGTCTGACTTCTGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLQNVGT*SDFCSL
Trigger: TAAACTGCAGAAGTCAGAGCAAGTGCCTACATTTTG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCACAACCTCTTCTTGGTaGACTTCTATTTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLTTSSW*TSIFSS
Trigger: TGATGAGAAAATAGAAGTCCACCAAGAAGAGGTTGT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCCTTGCTCTTTTCTTaGATGATCCCACACAAATTA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSLLFS*MIPHKL
Trigger: TAATTTGTGTGGGATCATCCAAGAAAAGAGCAAGGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCAGTCTTTGACAGAATaGATACAGTTTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFQSLTE*IQFPLT
Trigger: TGTCAGTGGAAACTGTATCCATTCTGTCAAAGACTG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACAGTCTTTGACAGAATaGATACAGTTTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTQSLTE*IQFPLT
Trigger: TGTCAGTGGAAACTGTATCCATTCTGTCAAAGACTG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACAGTCTTTGACAGAATaGATACAGTTTCCACTGACA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLQSLTE*IQFPLT
Trigger: TGTCAGTGGAAACTGTATCCATTCTGTCAAAGACTG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAAGTCCTTCGAAAAATaGTACGTCTTTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLKSFEK*YVFGFL
Trigger: GAGAAAACCAAAGACGTACCATTTTTCGAAGGACTT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAAGTCCTTCGAAAAATaGTACGTCTTTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSKSFEK*YVFGFL
Trigger: GAGAAAACCAAAGACGTACCATTTTTCGAAGGACTT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCAAGTTTACTGCTTTTaGTCTCAAGTTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLQVYCF*SQVPKS
Trigger: GGATTTTGGAACTTGAGACCAAAAGCAGTAAACTTG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGTCTGGATGATGTTTTaGACAAGTTTACTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLVWMMF*TSLLLL
Trigger: CAAAAGCAGTAAACTTGTCCAAAACATCATCCAGAC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTTGTCTTCACATTCTaGTCTTCCAAACAGACAATG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLVFTF*SSKQTM
Trigger: CATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCTTGTCTTCACATTCTaGTCTTCCAAACAGACAATG +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVILVFTF*SSKQTM
Trigger: CATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGGAAAATTGTAGGTTaGTCTTGGAAAGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGKIVG*SWKEEM
Trigger: CATTTCCTCTTTCCAAGACCAACCTACAATTTTCCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGGAAAATTGTAGGTTaGTCTTGGAAAGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGKIVG*SWKEEM
Trigger: CATTTCCTCTTTCCAAGACCAACCTACAATTTTCCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGGAAAATTGTAGGTTaGTCTTGGAAAGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGKIVG*SWKEEM
Trigger: CATTTCCTCTTTCCAAGACCAACCTACAATTTTCCC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAGAATGGCACAAATATaGCACAAACACAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSRMAQI*HKHNPV
Trigger: TACTGGATTGTGTTTGTGCCATATTTGTGCCATTCT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTTTAGAATTCTAATGTaGTACACATATGTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSFRILM*YTYVPG
Trigger: GCCTGGGACATATGTGTACCACATTAGAATTCTAAA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGTTTGAGTAAAATCTaGAAAGCTATATGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSLSKI*KAICQA
Trigger: GGCCTGGCATATAGCTTTCCAGATTTTACTCAAACT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR TCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACAATTCTCAAAGTTCTaGAATACTGGTCTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLQFSKF*NTGLQS
Trigger: AGACTGAAGACCAGTATTTCAGAACTTTGAGAATTG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR TCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACCAAAACTCTTTAGTTaGTGTTCAGAACTAGAAACC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVPKLFS*CSELET
Trigger: GGTTTCTAGTTCTGAACATCAACTAAAGAGTTTTGG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTTGGACAAGTTTACTaGTTTTGGTCTCAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFGQVY*FWSQVP
Trigger: TGGAACTTGAGACCAAAAGCAGTAAACTTGTCCAAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATTATCTGATTCACTGTaGACTTTTCCTTCCTGCAAT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLSDSL*TFPSCN
Trigger: ATTGCAGGAAGGAAAAGTGCACAGTGAATCAGATAA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAACATATTCACTACTTTaGCTCAGGATTAAGCACACT +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTTYSLL*LRIKHT
Trigger: AGTGTGCTTAATCCTGAGGCAAAGTAGTGAATATGT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR GCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTACATATTCACTACTTTaGCTCAGGATTAAGCACACT +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVITYSLL*LRIKHT
Trigger: AGTGTGCTTAATCCTGAGGCAAAGTAGTGAATATGT...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR GCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTACAAGTCTTGCATTaGTTTCTATTGTACATGGCT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLQVLH*FLLYMA
Trigger: AGCCATGTACAATAGAAAGCAATGCAAGACTTGTAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACAACCTCTTCTTGGTaGACTTCTATTTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTTSSW*TSIFSS
Trigger: TGATGAGAAAATAGAAGTCCACCAAGAAGAGGTTGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAACAACCTCTTCTTGGTaGACTTCTATTTTCTCATCA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLTTSSW*TSIFSS
Trigger: TGATGAGAAAATAGAAGTCCACCAAGAAGAGGTTGT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCCTTGCTCTTTTCTTaGATGATCCCACACAAATTA +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSLLFS*MIPHKL
Trigger: TAATTTGTGTGGGATCATCCAAGAAAAGAGCAAGGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCCTTGCTCTTTTCTTaGATGATCCCACACAAATTA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSLLFS*MIPHKL
Trigger: TAATTTGTGTGGGATCATCCAAGAAAAGAGCAAGGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAAAATGGTACGTCTTTaGTTTTCTCATCAGCATACT +
Preference number: 4 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSKMVRL*FSHQHT
Trigger: AGTATGCTGATGAGAAAACCAAAGACGTACCATTTT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAAAATGGTACGTCTTTaGTTTTCTCATCAGCATACT +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLKMVRL*FSHQHT
Trigger: AGTATGCTGATGAGAAAACCAAAGACGTACCATTTT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTAAAATGGTACGTCTTTaGTTTTCTCATCAGCATACT +
Preference number: 4 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSKMVRL*FSHQHT
Trigger: AGTATGCTGATGAGAAAACCAAAGACGTACCATTTT...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAAGTCCTTCGAAAAATaGTACGTCTTTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTKSFEK*YVFGFL
Trigger: GAGAAAACCAAAGACGTACCATTTTTCGAAGGACTT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTAAGTCCTTCGAAAAATaGTACGTCTTTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIKSFEK*YVFGFL
Trigger: GAGAAAACCAAAGACGTACCATTTTTCGAAGGACTT...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACAAGTTTACTGCTTTTaGTCTCAAGTTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLQVYCF*SQVPKS
Trigger: GGATTTTGGAACTTGAGACCAAAAGCAGTAAACTTG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCAAGTTTACTGCTTTTaGTCTCAAGTTCCAAAATCC +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFQVYCF*SQVPKS
Trigger: GGATTTTGGAACTTGAGACCAAAAGCAGTAAACTTG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGTCTGGATGATGTTTTaGACAAGTTTACTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLVWMMF*TSLLLL
Trigger: CAAAAGCAGTAAACTTGTCCAAAACATCATCCAGAC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGTCTGGATGATGTTTTaGACAAGTTTACTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTVWMMF*TSLLLL
Trigger: CAAAAGCAGTAAACTTGTCCAAAACATCATCCAGAC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGTCTGGATGATGTTTTaGACAAGTTTACTGCTTTTG +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFVWMMF*TSLLLL
Trigger: CAAAAGCAGTAAACTTGTCCAAAACATCATCCAGAC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTTTCTAACCTCCACTaGGTTAGAAAGAAAAATTTC +
Preference number: 4 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLSNLH*VRKKNF
Trigger: GAAATTTTTCTTTCTAACCCAGTGGAGGTTAGAAAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAGAATGGCACAAATATaGCACAAACACAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTRMAQI*HKHNPV
Trigger: TACTGGATTGTGTTTGTGCCATATTTGTGCCATTCT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGAATGGCACAAATATaGCACAAACACAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFRMAQI*HKHNPV
Trigger: TACTGGATTGTGTTTGTGCCATATTTGTGCCATTCT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTATCAGGAATTACCAGATaGTACAATTGTAGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: KENIGTIYLCTERGNSWVSGITR*YNCSKN
Trigger: GTTCTTGCTACAATTGTACCATCTGGTAATTCCTGA...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAAAAGACAAACGCGGGTaGAATTTAAACAAAAACGTC +
Preference number: 4 (lower is better)
Translates to: PNECVATLFLKEWHKYGTKDKRG*NLNKNV
Trigger: GACGTTTTTGTTTAAATTCCACCCGCGTTTGTCTTT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAAATGGTACGTCTTTaGTTTTCTCATCAGCATACT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFKMVRL*FSHQHT
Trigger: AGTATGCTGATGAGAAAACCAAAGACGTACCATTTT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTTCACTCATGTCTTTaGAAATATCAGAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLHSCL*KYQNVL
Trigger: AAGCACATTCTGATATTTCCAAAGACATGAGTGAAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTTCACTCATGTCTTTaGAAATATCAGAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLHSCL*KYQNVL
Trigger: AAGCACATTCTGATATTTCCAAAGACATGAGTGAAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCTTCACTCATGTCTTTaGAAATATCAGAATGTGCTT +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVILHSCL*KYQNVL
Trigger: AAGCACATTCTGATATTTCCAAAGACATGAGTGAAG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CCA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTTTCTAACCTCCACTaGGTTAGAAAGAAAAATTTC +
Preference number: 4 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLSNLH*VRKKNF
Trigger: GAAATTTTTCTTTCTAACCCAGTGGAGGTTAGAAAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CCA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCTTTCTAACCTCCACTaGGTTAGAAAGAAAAATTTC +
Preference number: 4 (lower is better)
Translates to: NLPQTELGIKYCLRLEVILSNLH*VRKKNF
Trigger: GAAATTTTTCTTTCTAACCCAGTGGAGGTTAGAAAG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS GCA 90 bp CCGCTGGGCTCGGGCTCAGCCGGCGTGGAGCTCCCCTCGGGCGGCTaGTCCGGGCTGCGCTGCTCGGTGGAGCTCCCGGCGCCCATGGCT +
Preference number: 5 (lower is better)
Translates to: PLGSGSAGVELPSGG*SGLRCSVELPAPMA
Trigger: AGCCATGGGCGCCGGGAGCTCCACCGAGCAGCGCAGCCCGGAGCAGCCGCCCGAGGGGAGCTCCACGCCGGCTGAGCCCGAGCCCAGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS GCA 90 bp CGGGCTCAGCCGGCGTGGAGCTCCCCTCGGGCGGCTGCTCCGGGCTaGGCTGCTCGGTGGAGCTCCCGGCGCCCATGGCTCCTCCGCACT +
Preference number: 5 (lower is better)
Translates to: RAQPAWSSPRAAAPG*AARWSSRRPWLLRT
Trigger: AGTGCGGAGGAGCCATGGGCGCCGGGAGCTCCACCGAGCAGCGCAGCCCGGAGCAGCCGCCCGAGGGGAGCTCCACGCCGGCTGAGCCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS CCA 90 bp GCGTGGAGCTCCCCTCGGGCGGCTGCTCCGGGCTGCGCTGCTCGGTaGAGCTCCCGGCGCCCATGGCTCCTCCGCACTTCTCCCGCGCCT +
Preference number: 5 (lower is better)
Translates to: AWSSPRAAAPGCAAR*SSRRPWLLRTSPAP
Trigger: AGGCGCGGGAGAAGTGCGGAGGAGCCATGGGCGCCGGGAGCTCCACCGAGCAGCGCAGCCCGGAGCAGCCGCCCGAGGGGAGCTCCACGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS GCA 90 bp TCAGCCGGCGTGGAGCTCCCCTCGGGCGGCTGCTCCGGGCTGCGCTaGTCGGTGGAGCTCCCGGCGCCCATGGCTCCTCCGCACTTCTCC +
Preference number: 5 (lower is better)
Translates to: SAGVELPSGGCSGLR*SVELPAPMAPPHFS
Trigger: GGAGAAGTGCGGAGGAGCCATGGGCGCCGGGAGCTCCACCGAGCAGCGCAGCCCGGAGCAGCCGCCCGAGGGGAGCTCCACGCCGGCTGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS CCA 90 bp GCGGCTGCTCCGGGCTGCGCTGCTCGGTGGAGCTCCCGGCGCCCATaGCTCCTCCGCACTTCTCCCGCGCCTAGCCGCCGGGTTACGCCT +
Preference number: 5 (lower is better)
Translates to: AAAPGCAARWSSRRP*LLRTSPAPSRRVTP
Trigger: AGGCGTAACCCGGCGGCTAGGCGCGGGAGAAGTGCGGAGGAGCCATGGGCGCCGGGAGCTCCACCGAGCAGCGCAGCCCGGAGCAGCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS GCA 90 bp GCGCCCGCGAGGTCCCGAGAGCGCCTTCCTTCGCCGCCAGCCGACTaGGAACGCGCCCAGCCTGCGAATGAAGGAGACGCGCTCGCGGCA +
Preference number: 5 (lower is better)
Translates to: APARSRERLPSPPAD*ERAQPANEGDALAA
Trigger: TGCCGCGAGCGCGTCTCCTTCATTCGCAGGCTGGGCGCGTTCGCAGTCGGCTGGCGGCGAAGGAAGGCGCTCTCGGGACCTCGCGGGCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS CCA 90 bp TGCCCTCCCCGGCAGACGCCTAGTCTCCTGCCTGCCAACCGCAGGTaGTTTCGGCGGGATCAGAGCGGACTGAGCGCCCAGACACTCCCG +
Preference number: 5 (lower is better)
Translates to: CPPRQTPSLLPANRR*FRRDQSGLSAQTLP
Trigger: CGGGAGTGTCTGGGCGCTCAGTCCGCTCTGATCCCGCCGAAACCACCTGCGGTTGGCAGGCAGGAGACTAGGCGTCTGCCGGGGAGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354675.10
CDS TCA 90 bp TCCTGCCTGCCAACCGCAGGTGGTTTCGGCGGGATCAGAGCGGACTaGGCGCCCAGACACTCCCGGAGGATGGGGGAGAACCGGAGGTGC +
Preference number: 5 (lower is better)
Translates to: SCLPTAGGFGGIRAD*APRHSRRMGENRRC
Trigger: GCACCTCCGGTTCTCCCCCATCCTCCGGGAGTGTCTGGGCGCTCAGTCCGCTCTGATCCCGCCGAAACCACCTGCGGTTGGCAGGCAGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354675.10
CDS GCA 90 bp AACCGGGGCTCGTGGGCACTTTCTGCCGGCTCCTGTGGGTGGGCTTaGTCGGAGGCGGTCAGTTTCTCGGAGGCAACCTCTGCCTTTCCG +
Preference number: 5 (lower is better)
Translates to: NRGSWALSAGSCGWA*SEAVSFSEATSAFP
Trigger: CGGAAAGGCAGAGGTTGCCTCCGAGAAACTGACCGCCTCCGAGCAAGCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp GCTGATAACCGGGGCTCGTGGGCACTTTCTGCCGGCTCCTGTGGGTaGGCTTGCTCGGAGGCGGTCAGTTTCTCGGAGGCAACCTCTGCC +
Preference number: 5 (lower is better)
Translates to: ADNRGSWALSAGSCG*ACSEAVSFSEATSA
Trigger: GGCAGAGGTTGCCTCCGAGAAACTGACCGCCTCCGAGCAAGCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp GTCTCTCTGTCCAACCATCTCGGGCCGGTCCTAAGGGACAGTTGGTaGCCCTCGGGATTCCGTGTCCGCCATCGCTGCGGGGCGAACTGC +
Preference number: 5 (lower is better)
Translates to: VSLSNHLGPVLRDSW*PSGFRVRHRCGANC
Trigger: GCAGTTCGCCCCGCAGCGATGGCGGACACGGAATCCCGAGGGCCACCAACTGTCCCTTAGGACCGGCCCGAGATGGTTGGACAGAGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359755.5
ENST00000490177.1
CDS CCA 90 bp AGAGTCTCTCTGTCCAACCATCTCGGGCCGGTCCTAAGGGACAGTTaGTGGCCCTCGGGATTCCGTGTCCGCCATCGCTGCGGGGCGAAC +
Preference number: 5 (lower is better)
Translates to: RVSLSNHLGPVLRDS*WPSGFRVRHRCGAN
Trigger: GTTCGCCCCGCAGCGATGGCGGACACGGAATCCCGAGGGCCACCAACTGTCCCTTAGGACCGGCCCGAGATGGTTGGACAGAGAGACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359755.5
ENST00000490177.1
CDS GCA 90 bp GACTCCCAGGTGGAAACGCCCTCCCCTTCGGTAGGGCTTCCAGCTTaGTCCGGGGAGGAACTTCCCTGCCCTGGATCATGTTCTTGGGAA +
Preference number: 5 (lower is better)
Translates to: DSQVETPSPSVGLPA*SGEELPCPGSCSWE
Trigger: TTCCCAAGAACATGATCCAGGGCAGGGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTACCGAAGGGGAGGGCGTTTCCACCTGGGAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp GAGGGCAGCTCAACTTTCTCATATTCAGCTGATAACCGGGGCTCGTaGGCACTTTCTGCCGGCTCCTGTGGGTGGGCTTGCTCGGAGGCG +
Preference number: 5 (lower is better)
Translates to: EGSSTFSYSADNRGS*ALSAGSCGWACSEA
Trigger: CGCCTCCGAGCAAGCCCACCCACAGGAGCCGGCAGAAAGTGCCCACGAGCCCCGGTTATCAGCTGAATATGAGAAAGTTGAGCTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp TCCCGTCAGCGACAGCTGCTGCCATCATATGAACCTGACTCTCGCTaGGCTCCTTGGACACCTCAGTGGCTGCCTTCTGCTCGGGCTGCT +
Preference number: 5 (lower is better)
Translates to: SRQRQLLPSYEPDSR*APWTPQWLPSARAA
Trigger: AGCAGCCCGAGCAGAAGGCAGCCACTGAGGTGTCCAAGGAGCTCAGCGAGAGTCAGGTTCATATGATGGCAGCAGCTGTCGCTGACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp TCCCCTTCGGTAGGGCTTCCAGCTTGCTCCGGGGAGGAACTTCCCTaGCCTGGATCATGTTCTTGGGAACCAGCAAGGATCCCGTCTGTC +
Preference number: 5 (lower is better)
Translates to: SPSVGLPACSGEELP*PGSCSWEPARIPSV
Trigger: GACAGACGGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGGCAGGGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTACCGAAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TTCGGTAGGGCTTCCAGCTTGCTCCGGGGAGGAACTTCCCTGCCCTaGATCATGTTCTTGGGAACCAGCAAGGATCCCGTCTGTCCCCGT +
Preference number: 5 (lower is better)
Translates to: FGRASSLLRGGTSLP*IMFLGTSKDPVCPR
Trigger: ACGGGGACAGACGGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGGCAGGGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTACCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp CAGGTACGCCACCTTCCACCTCCTGCACCGGAGTGGCCTCCTCTGTaGTGTCTGGGGAGTCGGTTAACTGGGAGACTGCTGACACCATTT +
Preference number: 5 (lower is better)
Translates to: QVRHLPPPAPEWPPL*CLGSRLTGRLLTPF
Trigger: AAATGGTGTCAGCAGTCTCCCAGTTAACCGACTCCCCAGACACCACAGAGGAGGCCACTCCGGTGCAGGAGGTGGAAGGTGGCGTACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp GCTCTTCTATGTCAGGTACGCCACCTTCCACCTCCTGCACCGGAGTaGCCTCCTCTGTGGTGTCTGGGGAGTCGGTTAACTGGGAGACTG +
Preference number: 5 (lower is better)
Translates to: ALLCQVRHLPPPAPE*PPLWCLGSRLTGRL
Trigger: CAGTCTCCCAGTTAACCGACTCCCCAGACACCACAGAGGAGGCCACTCCGGTGCAGGAGGTGGAAGGTGGCGTACCTGACATAGAAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp ATTTTAAGTAGCACTACTGTACAGGAGATCAGCTTAGCGGGTCCCTaGCCTCCCCGGCAGACGCCTAGTCTCCTGCCTGCCAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: ILSSTTVQEISLAGP*PPRQTPSLLPANRR
Trigger: CCTGCGGTTGGCAGGCAGGAGACTAGGCGTCTGCCGGGGAGGGCAGGGACCCGCTAAGCTGATCTCCTGTACAGTAGTGCTACTTAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354675.10
CDS GCA 90 bp TCTTCAGCTGGCACAGACCCTGCTGTTTCTTCCACCTCCGTTTTCTaGTCTTCGGTTCTCTCCTCCACGGTGCTGACGTGGACTTCGGCC +
Preference number: 5 (lower is better)
Translates to: SSAGTDPAVSSTSVF*SSVLSSTVLTWTSA
Trigger: GGCCGAAGTCCACGTCAGCACCGTGGAGGAGAGAACCGAAGAGCAGAAAACGGAGGTGGAAGAAACAGCAGGGTCTGTGCCAGCTGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp CCTCTGCTCTCTGCACAGGCTGAAGCACATCTTCTGGCCCACCGGTaGCAGGCAGCTGGGATTCCTCTTTCACTTTTTCTGCCACTGCCT +
Preference number: 5 (lower is better)
Translates to: PLLSAQAEAHLLAHR*QAAGIPLSLFLPLP
Trigger: AGGCAGTGGCAGAAAAAGTGAAAGAGGAATCCCAGCTGCCTGGCACCGGTGGGCCAGAAGATGTGCTTCAGCCTGTGCAGAGAGCAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp ACTCAGACAGAGGGACCACGGCCGGGACATCAGAGTCATCTTCGTTaGCCCCTGTTGGCCCTGCGTCTTCAACAGGGGCTTGTTCTTGTT +
Preference number: 5 (lower is better)
Translates to: TQTEGPRPGHQSHLR*PLLALRLQQGLVLV
Trigger: AACAAGAACAAGCCCCTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAAGATGACTCTGATGTCCCGGCCGTGGTCCCTCTGTCTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp TTCTCTCCATCGGAAGTAGCTCCTTCTTCAGCTTCCCCATCCTGCTaGACCTCGGCTAAGCCCTTTTCCAGACACGTGATCTCCTCGGGC +
Preference number: 5 (lower is better)
Translates to: FSPSEVAPSSASPSC*TSAKPFSRHVISSG
Trigger: GCCCGAGGAGATCACGTGTCTGGAAAAGGGCTTAGCCGAGGTGCAGCAGGATGGGGAAGCTGAAGAAGGAGCTACTTCCGATGGAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp AGATGCTTCGGTTCCTTCTTCGGCACCCAATGGCCCTGCAGTTTCTaGAGCTGTCACAGCTTCGGGGGTCAATTCCGCCTCACTAACGAC +
Preference number: 5 (lower is better)
Translates to: RCFGSFFGTQWPCSF*SCHSFGGQFRLTND
Trigger: GTCGTTAGTGAGGCGGAATTGACCCCCGAAGCTGTGACAGCTGCAGAAACTGCAGGGCCATTGGGTGCCGAAGAAGGAACCGAAGCATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp CCAGCTTGCTCCGGGGAGGAACTTCCCTGCCCTGGATCATGTTCTTaGGAACCAGCAAGGATCCCGTCTGTCCCCGTCTCTTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: PACSGEELPCPGSCS*EPARIPSVPVSLSF
Trigger: AAAAGACAAAGAGACGGGGACAGACGGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGGCAGGGAAGTTCCTCCCCGGAGCAAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TGCACCGGAGTGGCCTCCTCTGTGGTGTCTGGGGAGTCGGTTAACTaGGAGACTGCTGACACCATTTCTGTGGTCTCTTCAGCAGCAGAT +
Preference number: 5 (lower is better)
Translates to: CTGVASSVVSGESVN*ETADTISVVSSAAD
Trigger: ATCTGCTGCTGAAGAGACCACAGAAATGGTGTCAGCAGTCTCCCAGTTAACCGACTCCCCAGACACCACAGAGGAGGCCACTCCGGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp GCATTCCTCCACTGCTTGGCCAGATTCGGCTGGGGGAGAAATTTCTaGGTGGCTTTGCTCACGCTTCAGGGTCTCTTCGGGTTTCTCTGT +
Preference number: 5 (lower is better)
Translates to: AFLHCLARFGWGRNF*VALLTLQGLFGFLC
Trigger: ACAGAGAAACCCGAAGAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
ENST00000490177.1
CDS GCA 90 bp ACCGGTGCCAGGCAGCTGGGATTCCTCTTTCACTTTTTCTGCCACTaGCTGGAGGACCTCTTGAGTCCGCCTCTCTTGCTCTTCTATGTC +
Preference number: 5 (lower is better)
Translates to: TGARQLGFLFHFFCH*LEDLLSPPLLLFYV
Trigger: GACATAGAAGAGCAAGAGAGGCGGACTCAAGAGGTCCTCCAGGCAGTGGCAGAAAAAGTGAAAGAGGAATCCCAGCTGCCTGGCACCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TGGTCTTTCTGCCTCTGCTCTCTGCACAGGCTGAAGCACATCTTCTaGCCCACCGGTGCCAGGCAGCTGGGATTCCTCTTTCACTTTTTC +
Preference number: 5 (lower is better)
Translates to: WSFCLCSLHRLKHIF*PTGARQLGFLFHFF
Trigger: GAAAAAGTGAAAGAGGAATCCCAGCTGCCTGGCACCGGTGGGCCAGAAGATGTGCTTCAGCCTGTGCAGAGAGCAGAGGCAGAAAGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp TGGGTGGGCTTGCTCGGAGGCGGTCAGTTTCTCGGAGGCAACCTCTaGCTTTCCGTCTTCTTCTGTGTCTACTTTTTCTGGCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: WVGLLGGGQFLGGNL*LSVFFCVYFFWLLF
Trigger: GAACAAGAGCCAGAAAAAGTAGACACAGAAGAAGACGGAAAGGCAGAGGTTGCCTCCGAGAAACTGACCGCCTCCGAGCAAGCCCACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp TTCTTCAATAATGGTAGCTGCCCTCGTCCCGTCAGCGACAGCTGCTaGCATCATATGAACCTGACTCTCGCTGAGCTCCTTGGACACCTC +
Preference number: 5 (lower is better)
Translates to: FFNNGSCPRPVSDSC*HHMNLTLAELLGHL
Trigger: GAGGTGTCCAAGGAGCTCAGCGAGAGTCAGGTTCATATGATGGCAGCAGCTGTCGCTGACGGGACGAGGGCAGCTACCATTATTGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp CCTTTCTTCAATAATGGTAGCTGCCCTCGTCCCGTCAGCGACAGCTaGTGCCATCATATGAACCTGACTCTCGCTGAGCTCCTTGGACAC +
Preference number: 5 (lower is better)
Translates to: PFFNNGSCPRPVSDS*CHHMNLTLAELLGH
Trigger: GTGTCCAAGGAGCTCAGCGAGAGTCAGGTTCATATGATGGCAGCAGCTGTCGCTGACGGGACGAGGGCAGCTACCATTATTGAAGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp CTCCTCATGGATTTCCACAATCTCGTCTTTCTGGGTTGTGCCTGGTaGGTCAAAGTCGGCTACGGGGGTGCTTCCATCAGTCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: LLMDFHNLVFLGCAW*VKVGYGGASISLTV
Trigger: GACAGTGAGACTGATGGAAGCACCCCCGTAGCCGACTTTGACGCACCAGGCACAACCCAGAAAGACGAGATTGTGGAAATCCATGAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TCCTCCACTGCTTGGCCAGATTCGGCTGGGGGAGAAATTTCTGCGTaGCTTTGCTCACGCTTCAGGGTCTCTTCGGGTTTCTCTGTAGAT +
Preference number: 5 (lower is better)
Translates to: SSTAWPDSAGGEISA*LCSRFRVSSGFSVD
Trigger: ATCTACAGAGAAACCCGAAGAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAAGCAGTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
ENST00000490177.1
CDS CCA 90 bp TTCTCCTTCCTCTTTGCATTCCTCCACTGCTTGGCCAGATTCGGCTaGGGGAGAAATTTCTGCGTGGCTTTGCTCACGCTTCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: FSFLFAFLHCLARFG*GRNFCVALLTLQGL
Trigger: GAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATGCAAAGAGGAAGGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp GATGCGACCTCATTCTCCTCATGGATTTCCACAATCTCGTCTTTCTaGGTTGTGCCTGGTGCGTCAAAGTCGGCTACGGGGGTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: DATSFSSWISTISSF*VVPGASKSATGVLP
Trigger: TGGAAGCACCCCCGTAGCCGACTTTGACGCACCAGGCACAACCCAGAAAGACGAGATTGTGGAAATCCATGAGGAGAATGAGGTCGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TCTGTGCCCCCTGACTGGGTACCAGATGCGACCTCATTCTCCTCATaGATTTCCACAATCTCGTCTTTCTGGGTTGTGCCTGGTGCGTCA +
Preference number: 5 (lower is better)
Translates to: SVPPDWVPDATSFSS*ISTISSFWVVPGAS
Trigger: TGACGCACCAGGCACAACCCAGAAAGACGAGATTGTGGAAATCCATGAGGAGAATGAGGTCGCATCTGGTACCCAGTCAGGGGGCACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp TCTGTGACAATGACTTCTTCTTCCTCCTGGCTGTTTAGGGCTCCTTaGCCGTTCAGGGCTCCTTTCTGGCCATTTAGGTCACCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SVTMTSSSSWLFRAP*PFRAPFWPFRSPSW
Trigger: CCAGGAGGGTGACCTAAATGGCCAGAAAGGAGCCCTGAACGGTCAAGGAGCCCTAAACAGCCAGGAGGAAGAAGAAGTCATTGTCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS TCA 90 bp CTTCCACCTCCGTTTTCTGCTCTTCGGTTCTCTCCTCCACGGTGCTaGCGTGGACTTCGGCCACAACCTCTTCTTGGTGGACTTCTATTT +
Preference number: 5 (lower is better)
Translates to: LPPPFSALRFSPPRC*RGLRPQPLLGGLLF
Trigger: AAATAGAAGTCCACCAAGAAGAGGTTGTGGCCGAAGTCCACGTCAGCACCGTGGAGGAGAGAACCGAAGAGCAGAAAACGGAGGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp TGGGATTCCTCTTTCACTTTTTCTGCCACTGCCTGGAGGACCTCTTaGGTCCGCCTCTCTTGCTCTTCTATGTCAGGTACGCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: WDSSFTFSATAWRTS*VRLSCSSMSGTPPS
Trigger: GGAAGGTGGCGTACCTGACATAGAAGAGCAAGAGAGGCGGACTCAAGAGGTCCTCCAGGCAGTGGCAGAAAAAGTGAAAGAGGAATCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp CCTCATTCTCCTCATGGATTTCCACAATCTCGTCTTTCTGGGTTGTaGCTGGTGCGTCAAAGTCGGCTACGGGGGTGCTTCCATCAGTCT +
Preference number: 5 (lower is better)
Translates to: PHSPHGFPQSRLSGL*LVRQSRLRGCFHQS
Trigger: AGACTGATGGAAGCACCCCCGTAGCCGACTTTGACGCACCAGGCACAACCCAGAAAGACGAGATTGTGGAAATCCATGAGGAGAATGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp CTCTCTTTCTGTGCAGGAACTGCCTCTGCTTCTGTGCCCCCTGACTaGGTACCAGATGCGACCTCATTCTCCTCATGGATTTCCACAATC +
Preference number: 5 (lower is better)
Translates to: LSFCAGTASASVPPD*VPDATSFSSWISTI
Trigger: GATTGTGGAAATCCATGAGGAGAATGAGGTCGCATCTGGTACCCAGTCAGGGGGCACAGAAGCAGAGGCAGTTCCTGCACAGAAAGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp TCCTCTTTGGCTGAAGTAATTGGTGTTTCATCCTGTGCAGAGGCCTaGGGTTCCTCTCCTTCTTTCTCCGTTTCCTGTCCAGCGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SSLAEVIGVSSCAEA*GSSPSFSVSCPASW
Trigger: CCAGGACGCTGGACAGGAAACGGAGAAAGAAGGAGAGGAACCTCAGGCCTCTGCACAGGATGAAACACCAATTACTTCAGCCAAAGAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp ACTGCTTGGCCAGATTCGGCTGGGGGAGAAATTTCTGCGTGGCTTTaGTCACGCTTCAGGGTCTCTTCGGGTTTCTCTGTAGATTGTTTG +
Preference number: 5 (lower is better)
Translates to: TAWPDSAGGEISAWL*SRFRVSSGFSVDCL
Trigger: CAAACAATCTACAGAGAAACCCGAAGAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATTTCTCCCCCAGCCGAATCTGGCCAAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
ENST00000490177.1
CDS CCA 90 bp TCCTCCACGGTGCTGACGTGGACTTCGGCCACAACCTCTTCTTGGTaGACTTCTATTTTCTCATCAAACACTTCTGTCGCCAACGGAGCA +
Preference number: 5 (lower is better)
Translates to: SSTVLTWTSATTSSW*TSIFSSNTSVANGA
Trigger: TGCTCCGTTGGCGACAGAAGTGTTTGATGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGCCGAAGTCCACGTCAGCACCGTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp CTCTCCTCCACGGTGCTGACGTGGACTTCGGCCACAACCTCTTCTTaGTGGACTTCTATTTTCTCATCAAACACTTCTGTCGCCAACGGA +
Preference number: 5 (lower is better)
Translates to: LSSTVLTWTSATTSS*WTSIFSSNTSVANG
Trigger: TCCGTTGGCGACAGAAGTGTTTGATGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGCCGAAGTCCACGTCAGCACCGTGGAGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp ACCTCCGTTTTCTGCTCTTCGGTTCTCTCCTCCACGGTGCTGACGTaGACTTCGGCCACAACCTCTTCTTGGTGGACTTCTATTTTCTCA +
Preference number: 5 (lower is better)
Translates to: TSVFCSSVLSSTVLT*TSATTSSWWTSIFS
Trigger: TGAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGCCGAAGTCCACGTCAGCACCGTGGAGGAGAGAACCGAAGAGCAGAAAACGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp ATTCTCCTCATGGATTTCCACAATCTCGTCTTTCTGGGTTGTGCCTaGTGCGTCAAAGTCGGCTACGGGGGTGCTTCCATCAGTCTCACT +
Preference number: 5 (lower is better)
Translates to: ILLMDFHNLVFLGCA*CVKVGYGGASISLT
Trigger: AGTGAGACTGATGGAAGCACCCCCGTAGCCGACTTTGACGCACCAGGCACAACCCAGAAAGACGAGATTGTGGAAATCCATGAGGAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp CAGATACTATCACTGGTGTCGATTTTGCCTGACAGTCGGGCCCTGTaGGCACAGCATCTTCCCCTGGATGAGCGGCAAAGTCTTCATTTT +
Preference number: 5 (lower is better)
Translates to: QILSLVSILPDSRAL*AQHLPLDERQSLHF
Trigger: AAAATGAAGACTTTGCCGCTCATCCAGGGGAAGATGCTGTGCCCACAGGGCCCGACTGTCAGGCAAAATCGACACCAGTGATAGTATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCCAAGGCTGGGGTCCTaGTGGTCGCCAGCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVPRLGS*WSPAPA
Trigger: AGCAGGGGCTGGCGACCACAAGGACCCCAGCCTTGG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp TCATTCACATGGGTTGGCTCTGCTTCTGTTTTCTCCCTTTCGACTTaGACTACCATCTCTCTCTCCACGGGGGATGGAGGAGACTTAGCG +
Preference number: 5 (lower is better)
Translates to: SFTWVGSASVFSLST*TTISLSTGDGGDLA
Trigger: CGCTAAGTCTCCTCCATCCCCCGTGGAGAGAGAGATGGTAGTTCAAGTCGAAAGGGAGAAAACAGAAGCAGAGCCAACCCATGTGAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp CCACCTCCCTCTTCCTCAGATGGGAGGACGACCTCTTCCAGCTGCTaGTCATTTACAGTGGAACCTTCTACCTCAACAGTCATGGTCTTT +
Preference number: 5 (lower is better)
Translates to: PPPSSSDGRTTSSSC*SFTVEPSTSTVMVF
Trigger: AAAGACCATGACTGTTGAGGTAGAAGGTTCCACTGTAAATGATCAGCAGCTGGAAGAGGTCGTCCTCCCATCTGAGGAAGAGGGAGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp TTTGAGCTTCACCAGCTCCTTGGCAGGTTCAGCTTCCTGAGGTTCTaGATCCATTTCAACCAATTCTTCAGCTGGCACAGACCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: FELHQLLGRFSFLRF*IHFNQFFSWHRPCC
Trigger: ACAGCAGGGTCTGTGCCAGCTGAAGAATTGGTTGAAATGGATGCAGAACCTCAGGAAGCTGAACCTGCCAAGGAGCTGGTGAAGCTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp GGGTGTCTCCTCCTGCCCATCATCTGTGATGTCGTGAACAACCGCTaGCTTAGTAGCCATCTCTTTATCGGAGTCTCTTTTGCTCACATC +
Preference number: 5 (lower is better)
Translates to: GCLLLPIICDVVNNR*LSSHLFIGVSFAHI
Trigger: GATGTGAGCAAAAGAGACTCCGATAAAGAGATGGCTACTAAGTCAGCGGTTGTTCACGACATCACAGATGATGGGCAGGAGGAGACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
ENST00000490177.1
CDS TCA 90 bp CACGTTTCTTTGAGCTTCACCAGCTCCTTGGCAGGTTCAGCTTCCTaGGGTTCTGCATCCATTTCAACCAATTCTTCAGCTGGCACAGAC +
Preference number: 5 (lower is better)
Translates to: HVSLSFTSSLAGSAS*GSASISTNSSAGTD
Trigger: GTCTGTGCCAGCTGAAGAATTGGTTGAAATGGATGCAGAACCTCAGGAAGCTGAACCTGCCAAGGAGCTGGTGAAGCTCAAAGAAACGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp TCCTTTGCCCCATCTATGATGGGCACATTCACTGTCTGGAGGAGCTaGTTACTGACCTCTTCAGATACGGTAACAGCTGTTTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: SFAPSMMGTFTVWRS*LLTSSDTVTAVSCS
Trigger: TGAGCACGAAACAGCTGTTACCGTATCTGAAGAGGTCAGTAAGCAGCTCCTCCAGACAGTGAATGTGCCCATCATAGATGGGGCAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TTTCTCCCTTTCGACTTGAACTACCATCTCTCTCTCCACGGGGGATaGAGGAGACTTAGCGTGACTCTGCAGTTCAAGAGCATCATCCTT +
Preference number: 5 (lower is better)
Translates to: FLPFDLNYHLSLHGG*RRLSVTLQFKSIIL
Trigger: AAGGATGATGCTCTTGAACTGCAGAGTCACGCTAAGTCTCCTCCATCCCCCGTGGAGAGAGAGATGGTAGTTCAAGTCGAAAGGGAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp CTGCTGACTTCCTTTGCCCCATCTATGATGGGCACATTCACTGTCTaGAGGAGCTGCTTACTGACCTCTTCAGATACGGTAACAGCTGTT +
Preference number: 5 (lower is better)
Translates to: LLTSFAPSMMGTFTV*RSCLLTSSDTVTAV
Trigger: AACAGCTGTTACCGTATCTGAAGAGGTCAGTAAGCAGCTCCTCCAGACAGTGAATGTGCCCATCATAGATGGGGCAAAGGAAGTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCCAAGGCTGGGGTCCTaGTGGTCGCCAGCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSPRLGS*WSPAPA
Trigger: AGCAGGGGCTGGCGACCACAAGGACCCCAGCCTTGG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCAAGGCTGGGGTCCTaGTGGTCGCCAGCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPRLGS*WSPAPA
Trigger: AGCAGGGGCTGGCGACCACAAGGACCCCAGCCTTGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAGAGCTCTCGCCCTTTaGCTCCTCCTGGCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVRALAL*LLLAVR
Trigger: CCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp ATCCCACACAAATTAAAGCTTCCCAAGATACTGAGGTATCCACCTTaGGCTTTGGTTCTTCCGGCTTTGGCTCTTCCACGCTCCCTTTCA +
Preference number: 5 (lower is better)
Translates to: IPHKLKLPKILRYPP*ALVLPALALPRSLS
Trigger: TGAAAGGGAGCGTGGAAGAGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAGTATCTTGGGAAGCTTTAATTTGTGTGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp AACTCCTCCTGTGCTTGGGGTGTGATCGCTTTATCTGATTCACTGTaGACTTTTCCTTCCTGCAATTCTACTTCCTGGGCATCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: NSSCAWGVIALSDSL*TFPSCNSTSWASSF
Trigger: GAAGGAGGATGCCCAGGAAGTAGAATTGCAGGAAGGAAAAGTGCACAGTGAATCAGATAAAGCGATCACACCCCAAGCACAGGAGGAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCAAGGCTGGGGTCCTaGTGGTCGCCAGCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTPRLGS*WSPAPA
Trigger: AGCAGGGGCTGGCGACCACAAGGACCCCAGCCTTGG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTTCGTTGGCCCCTGTaGGCCCTGCGTCTTCAACAG +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLRWPL*ALRLQQ
Trigger: CTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp TCGATTATTTCGGGTGTCTCCTCCTGCCCATCATCTGTGATGTCGTaGACAACCGCTGACTTAGTAGCCATCTCTTTATCGGAGTCTCTT +
Preference number: 5 (lower is better)
Translates to: SIISGVSSCPSSVMS*TTADLVAISLSESL
Trigger: AAGAGACTCCGATAAAGAGATGGCTACTAAGTCAGCGGTTGTTCACGACATCACAGATGATGGGCAGGAGGAGACACCCGAAATAATCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
ENST00000490177.1
CDS TCA 90 bp TCCATCACCATCTCCTGTGATTTTACCCCAGCTAAGGTTTCGGCTTaGCAAGTGGTTACAAGCTCACTGGACTCTATGCTCTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: SITISCDFTPAKVSA*QVVTSSLDSMLSVT
Trigger: AGTCACAGAGAGCATAGAGTCCAGTGAGCTTGTAACCACTTGTCAAGCCGAAACCTTAGCTGGGGTAAAATCACAGGAGATGGTGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp AGGAGCTGCTTACTGACCTCTTCAGATACGGTAACAGCTGTTTCGTaGTCAAGCTTCTCTTCATTCACATGGGTTGGCTCTGCTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RSCLLTSSDTVTAVS*SSFSSFTWVGSASV
Trigger: AACAGAAGCAGAGCCAACCCATGTGAATGAAGAGAAGCTTGAGCACGAAACAGCTGTTACCGTATCTGAAGAGGTCAGTAAGCAGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp AATGTGCACCTGCAGGCTCCAACGTTTCACCTGTTTCTAAAATGTTaGCAGTTTCTCCTAAGACCTTTTCCTCCTCTGCAGCCGCTGTTA +
Preference number: 5 (lower is better)
Translates to: NVHLQAPTFHLFLKC*QFLLRPFPPLQPLL
Trigger: TAACAGCGGCTGCAGAGGAGGAAAAGGTCTTAGGAGAAACTGCCAACATTTTAGAAACAGGTGAAACGTTGGAGCCTGCAGGTGCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGCATTCCTCCACTGCTaGGCCAGATTCGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLAFLHC*ARFGWG
Trigger: CCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATGC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGCATTCCTCCACTGCTaGGCCAGATTCGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSAFLHC*ARFGWG
Trigger: CCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATGC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGTAGGGCTTCCAGCTaGCTCCGGGGAGGAACTTCC +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGRASS*LRGGTS
Trigger: GGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTACC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGGTAGGGCTTCCAGCTaGCTCCGGGGAGGAACTTCC +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSGRASS*LRGGTS
Trigger: GGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTACC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGGGCGAACTGCCGCTaGGGTGCACGTGCTACTCAC +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGANCR*GARATH
Trigger: GTGAGTAGCACGTGCACCCAAGCGGCAGTTCGCCCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359755.5
CDS TCA 90 bp CAGTTTCTCCTAAGACCTTTTCCTCCTCTGCAGCCGCTGTTAGAGTaGATGATGCCTCAGAGCTCTGAACTTGAATTTTGGTGCATACTG +
Preference number: 5 (lower is better)
Translates to: QFLLRPFPPLQPLLE*MMPQSSELEFWCIL
Trigger: CAGTATGCACCAAAATTCAAGTTCAGAGCTCTGAGGCATCATTCACTCTAACAGCGGCTGCAGAGGAGGAAAAGGTCTTAGGAGAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp GTCCCCCTTCCTCATCAGAAGAGGACCCTCTCCTTGCTCTTTTCTTaGATGATCCCACACAAATTAAAGCTTCCCAAGATACTGAGGTAT +
Preference number: 5 (lower is better)
Translates to: VPLPHQKRTLSLLFS*MIPHKLKLPKILRY
Trigger: ATACCTCAGTATCTTGGGAAGCTTTAATTTGTGTGGGATCATCCAAGAAAAGAGCAAGGAGAGGGTCCTCTTCTGATGAGGAAGGGGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp CAGCATACTGGTCAGCCTCTTGAGTCCCCTCAGTCTTTGACAGAATaGATACAGTTTCCACTGACACCTCTTTATCTGTATGCTCTAGAG +
Preference number: 5 (lower is better)
Translates to: QHTGQPLESPQSLTE*IQFPLTPLYLYALE
Trigger: CTCTAGAGCATACAGATAAAGAGGTGTCAGTGGAAACTGTATCCATTCTGTCAAAGACTGAGGGGACTCAAGAGGCTGACCAGTATGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp GGTAACAGCTGTTTCGTGCTCAAGCTTCTCTTCATTCACATGGGTTaGCTCTGCTTCTGTTTTCTCCCTTTCGACTTGAACTACCATCTC +
Preference number: 5 (lower is better)
Translates to: GNSCFVLKLLFIHMG*LCFCFLPFDLNYHL
Trigger: GAGATGGTAGTTCAAGTCGAAAGGGAGAAAACAGAAGCAGAGCCAACCCATGTGAATGAAGAGAAGCTTGAGCACGAAACAGCTGTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TTATCACGTGAGCTTGTGTCTGTAACTCAGACGTCAACATTTCGGTaGCTGTTTCTTCTGTACGTACAAACTGGTCAACGGCTGTCTGGA +
Preference number: 5 (lower is better)
Translates to: LSRELVSVTQTSTFR*LFLLYVQTGQRLSG
Trigger: TCCAGACAGCCGTTGACCAGTTTGTACGTACAGAAGAAACAGCCACCGAAATGTTGACGTCTGAGTTACAGACACAAGCTCACGTGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTCTTCTGTAGGAGCTaGGTGGCGGGGTCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSFFCRS*VAGSEA
Trigger: TGCCTCGGACCCCGCCACCAAGCTCCTACAGAAGAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGCATTCCTCCACTGCTaGGCCAGATTCGGCTGGGGG +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTAFLHC*ARFGWG
Trigger: CCCCCAGCCGAATCTGGCCAAGCAGTGGAGGAATGC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGAGCTCTCGCCCTTTaGCTCCTCCTGGCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFRALAL*LLLAVR
Trigger: CCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAGAGCTCTCGCCCTTTaGCTCCTCCTGGCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLRALAL*LLLAVR
Trigger: CCGGACAGCCAGGAGGAGCAAAAGGGCGAGAGCTCT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTACTGAGGTATCCACCTaGCGCTTTGGTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVTEVST*RFGSSG
Trigger: GCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAGT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGTAGGGCTTCCAGCTaGCTCCGGGGAGGAACTTCC +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGRASS*LRGGTS
Trigger: GGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTACC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGTAGGGCTTCCAGCTaGCTCCGGGGAGGAACTTCC +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGRASS*LRGGTS
Trigger: GGAAGTTCCTCCCCGGAGCAAGCTGGAAGCCCTACC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTTCGTTGGCCCCTGTaGGCCCTGCGTCTTCAACAG +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLRWPL*ALRLQQ
Trigger: CTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCAGAGTCATCTTCGTaGGCCCCTGTTGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSESSS*APVGPA
Trigger: CGCAGGGCCAACAGGGGCCAACGAAGATGACTCTGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGCCTGGAGGACCTCTaGAGTCCGCCTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSCLEDL*SPPLLL
Trigger: GAGCAAGAGAGGCGGACTCAAGAGGTCCTCCAGGCA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTTGCCTGGAGGACCTCTaGAGTCCGCCTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSCLEDL*SPPLLL
Trigger: GAGCAAGAGAGGCGGACTCAAGAGGTCCTCCAGGCA...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGTCCTAAGGGACAGTaGGTGGCCCTCGGGATTCCG +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGPKGQ*VALGIP
Trigger: CGGAATCCCGAGGGCCACCAACTGTCCCTTAGGACC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359755.5
CDS TCA 90 bp AAATCCCATTTTCAGGCTCTAAATCCTCAATTGCTACACTCACTTTaGCCTCCTGGCAAGCAACCTGCTCATCGACTTCATCTGACTTCC +
Preference number: 5 (lower is better)
Translates to: KSHFQALNPQLLHSL*PPGKQPAHRLHLTS
Trigger: GGAAGTCAGATGAAGTCGATGAGCAGGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAATTGAGGATTTAGAGCCTGAAAATGGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS GCA 90 bp AAATCCTCAATTGCTACACTCACTTTGACCTCCTGGCAAGCAACCTaGTCATCGACTTCATCTGACTTCCACTTCAGTGATGTGGTTTTC +
Preference number: 5 (lower is better)
Translates to: KSSIATLTLTSWQAT*SSTSSDFHFSDVVF
Trigger: GAAAACCACATCACTGAAGTGGAAGTCAGATGAAGTCGATGAGCAGGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAATTGAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TTTTCAGGCTCTAAATCCTCAATTGCTACACTCACTTTGACCTCCTaGCAAGCAACCTGCTCATCGACTTCATCTGACTTCCACTTCAGT +
Preference number: 5 (lower is better)
Translates to: FSGSKSSIATLTLTS*QATCSSTSSDFHFS
Trigger: ACTGAAGTGGAAGTCAGATGAAGTCGATGAGCAGGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAATTGAGGATTTAGAGCCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp TCGGTGGCTGTTTCTTCTGTACGTACAAACTGGTCAACGGCTGTCTaGATGATGTTTTGGACAAGTTTACTGCTTTTGGTCTCAAGTTCC +
Preference number: 5 (lower is better)
Translates to: SVAVSSVRTNWSTAV*MMFWTSLLLLVSSS
Trigger: GGAACTTGAGACCAAAAGCAGTAAACTTGTCCAAAACATCATCCAGACAGCCGTTGACCAGTTTGTACGTACAGAAGAAACAGCCACCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp GACTTTGCAGATTCTCTCTCTTGTTTCTGTAACTCCTCCTGTGCTTaGGGTGTGATCGCTTTATCTGATTCACTGTGCACTTTTCCTTCC +
Preference number: 5 (lower is better)
Translates to: DFADSLSCFCNSSCA*GVIALSDSLCTFPS
Trigger: GGAAGGAAAAGTGCACAGTGAATCAGATAAAGCGATCACACCCCAAGCACAGGAGGAGTTACAGAAACAAGAGAGAGAATCTGCAAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTCTTCTGTAGGAGCTaGGTGGCGGGGTCCGAGGCA +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLFFCRS*VAGSEA
Trigger: TGCCTCGGACCCCGCCACCAAGCTCCTACAGAAGAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTGAAACTGGTCTTTTaGCGCCAGCCGGCCCAACCT +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLKLVF*RQPAQP
Trigger: AGGTTGGGCCGGCTGGCGCAAAAAGACCAGTTTCAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGACAAGGTAGCGCTCTaGACCTTGTCCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVDKVAL*TLSSSS
Trigger: AGATGAGCTGGACAAGGTCAAGAGCGCTACCTTGTC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTATCCACCTTGCGCTTaGGTTCTTCCGGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVYPPCA*VLPALA
Trigger: AGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGATA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTCTGTCCCCGTCTCTTaGTCTTTTCCGGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVSVPVS*SFPASS
Trigger: TGATGAGGCCGGAAAAGACAAAGAGACGGGGACAGA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTTCGTTGGCCCCTGTaGGCCCTGCGTCTTCAACAG +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLRWPL*ALRLQQ
Trigger: CTGTTGAAGACGCAGGGCCAACAGGGGCCAACGAAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCAGAGTCATCTTCGTaGGCCCCTGTTGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSESSS*APVGPA
Trigger: CGCAGGGCCAACAGGGGCCAACGAAGATGACTCTGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCAGAGTCATCTTCGTaGGCCCCTGTTGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSESSS*APVGPA
Trigger: CGCAGGGCCAACAGGGGCCAACGAAGATGACTCTGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTGCCTGGAGGACCTCTaGAGTCCGCCTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFCLEDL*SPPLLL
Trigger: GAGCAAGAGAGGCGGACTCAAGAGGTCCTCCAGGCA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATGCCTGGAGGACCTCTaGAGTCCGCCTCTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTCLEDL*SPPLLL
Trigger: GAGCAAGAGAGGCGGACTCAAGAGGTCCTCCAGGCA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCACTGGTGTCGATTTaGCCTGACAGTCGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSLVSI*PDSRAL
Trigger: CAGGGCCCGACTGTCAGGCAAAATCGACACCAGTGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp CAGATTCTCTCTCTTGTTTCTGTAACTCCTCCTGTGCTTGGGGTGTaGTCGCTTTATCTGATTCACTGTGCACTTTTCCTTCCTGCAATT +
Preference number: 5 (lower is better)
Translates to: QILSLVSVTPPVLGV*SLYLIHCALFLPAI
Trigger: AATTGCAGGAAGGAAAAGTGCACAGTGAATCAGATAAAGCGATCACACCCCAAGCACAGGAGGAGTTACAGAAACAAGAGAGAGAATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTGAAACTGGTCTTTTaGCGCCAGCCGGCCCAACCT +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLKLVF*RQPAQP
Trigger: AGGTTGGGCCGGCTGGCGCAAAAAGACCAGTTTCAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGTGGTCTCCTCCCATaGCTTTTGGTCCCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGGLLP*LLVPLP
Trigger: AGGAAGGGGGACCAAAAGCAATGGGAGGAGACCACC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGTGGTCTCCTCCCATaGCTTTTGGTCCCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGGLLP*LLVPLP
Trigger: AGGAAGGGGGACCAAAAGCAATGGGAGGAGACCACC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAGGTGGTCTCCTCCCATaGCTTTTGGTCCCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: KENIGTIYLCTERGNSWVGGLLP*LLVPLP
Trigger: AGGAAGGGGGACCAAAAGCAATGGGAGGAGACCACC...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCCCTGGATCATGTTCTaGGGAACCAGCAAGGATCCC +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSPWIMF*GTSKDP
Trigger: GGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCCCTGGATCATGTTCTaGGGAACCAGCAAGGATCCC +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLPWIMF*GTSKDP
Trigger: GGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTGCTCTGCGCTTTTTaGGGCTTGCTGTGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLLCAF*GLLCLH
Trigger: ATGGAGGCACAGCAAGCCCAAAAAAGCGCAGAGCAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTGAGTCCGCCTCTCTaGCTCTTCTATGTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLSPPL*LFYVRY
Trigger: GTACCTGACATAGAAGAGCAAGAGAGGCGGACTCAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCACTGGTGTCGATTTaGCCTGACAGTCGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSLVSI*PDSRAL
Trigger: CAGGGCCCGACTGTCAGGCAAAATCGACACCAGTGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCACTGGTGTCGATTTaGCCTGACAGTCGGGCCCTG +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSLVSI*PDSRAL
Trigger: CAGGGCCCGACTGTCAGGCAAAATCGACACCAGTGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTATTGCTACACTCACTTaGACCTCCTGGCAAGCAACC +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVIATLT*TSWQAT
Trigger: GGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAAT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTTGTCCCACTGCGGTaGACTCTGACTCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLVPLR*TLTPLW
Trigger: CCAAAGAGGAGTCAGAGTCAACCGCAGTGGGACAAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTTGTCCCACTGCGGTaGACTCTGACTCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLVPLR*TLTPLW
Trigger: CCAAAGAGGAGTCAGAGTCAACCGCAGTGGGACAAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCTTCTGGCACAGACTTaGTTCCAGCTCCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLLAQT*FQLHLP
Trigger: AGGGAGGTGGAGCTGGAACAAAGTCTGTGCCAGAAG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCCTTCTGGCACAGACTTaGTTCCAGCTCCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLLAQT*FQLHLP
Trigger: AGGGAGGTGGAGCTGGAACAAAGTCTGTGCCAGAAG...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTGGGTTCGCTTTCTTaGGATGCTGCTTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLGSLS*DAASPA
Trigger: GGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTGGGTTCGCTTTCTTaGGATGCTGCTTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLGSLS*DAASPA
Trigger: GGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGAATTTCTGCGTGGCTTaGCTCACGCTTCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSNFCVA*LTLQGL
Trigger: GAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCAATTTCTGCGTGGCTTaGCTCACGCTTCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLNFCVA*LTLQGL
Trigger: GAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGGCGTCACCATCTTTTaGAATGATGCCCAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSGVTIF*NDAQGV
Trigger: CACTCCCTGGGCATCATTCAAAAAGATGGTGACGCC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGTAGCGCTCTTGACCTaGTCCAGCTCATCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVVALLT*SSSSSL
Trigger: TAAAGAAGATGAGCTGGACAAGGTCAAGAGCGCTAC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATTGGTTCTTCCGGCTTaGGCTCTTCCACGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLVLPA*ALPRSL
Trigger: AAGGGAGCGTGGAAGAGCCAAAGCCGGAAGAACCAA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTGGTTCTTCCGGCTTaGGCTCTTCCACGCTCCCTT +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLVLPA*ALPRSL
Trigger: AAGGGAGCGTGGAAGAGCCAAAGCCGGAAGAACCAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTGAGGTATCCACCTaGCGCTTTGGTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFTEVST*RFGSSG
Trigger: GCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAGT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAACTGAGGTATCCACCTaGCGCTTTGGTTCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTTEVST*RFGSSG
Trigger: GCCGGAAGAACCAAAGCGCAAGGTGGATACCTCAGT...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAAGAGGACCCTCTCCTaGCTCTTTTCTTGGATGATC +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVKRTLS*LFSWMI
Trigger: GATCATCCAAGAAAAGAGCAAGGAGAGGGTCCTCTT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTCCTCCCATTGCTTTaGGTCCCCCTTCCTCATCAG +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLLPLL*VPLPHQ
Trigger: CTGATGAGGAAGGGGGACCAAAAGCAATGGGAGGAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACTCCTCCCATTGCTTTaGGTCCCCCTTCCTCATCAG +
Preference number: 5 (lower is better)
Translates to: KENIGTIYLCTERGNSWVLLPLL*VPLPHQ
Trigger: CTGATGAGGAAGGGGGACCAAAAGCAATGGGAGGAG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTCTGTCCCCGTCTCTTaGTCTTTTCCGGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLSVPVS*SFPASS
Trigger: TGATGAGGCCGGAAAAGACAAAGAGACGGGGACAGA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCCCTGGATCATGTTCTaGGGAACCAGCAAGGATCCC +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFPWIMF*GTSKDP
Trigger: GGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACCCTGGATCATGTTCTaGGGAACCAGCAAGGATCCC +
Preference number: 5 (lower is better)
Translates to: KENIGTIYLCTERGNSWVPWIMF*GTSKDP
Trigger: GGGATCCTTGCTGGTTCCCAAGAACATGATCCAGGG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTAACAGGGGCTTGTTCTaGTTTCCCATCTGGCCTTTT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVNRGLF*FPIWPF
Trigger: AAAAGGCCAGATGGGAAACAAGAACAAGCCCCTGTT...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTCTGCTCTGCGCTTTTTaGGGCTTGCTGTGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLLCAF*GLLCLH
Trigger: ATGGAGGCACAGCAAGCCCAAAAAAGCGCAGAGCAG...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACTGCTCTGCGCTTTTTaGGGCTTGCTGTGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTLLCAF*GLLCLH
Trigger: ATGGAGGCACAGCAAGCCCAAAAAAGCGCAGAGCAG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCTGCTCTGCGCTTTTTaGGGCTTGCTGTGCCTCCAT +
Preference number: 5 (lower is better)
Translates to: NLPQTELGIKYCLRLEVILLCAF*GLLCLH
Trigger: ATGGAGGCACAGCAAGCCCAAAAAAGCGCAGAGCAG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGCTTCAGCTTCTACTaGTTCAAGAGGTTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGFSFY*FKRFCH
Trigger: GTGACAGAACCTCTTGAACAAGTAGAAGCTGAAGCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTCTCGTCTTTCTGGGTaGTGCCTGGTGCGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSSRLSG*CLVRQS
Trigger: ACTTTGACGCACCAGGCACAACCCAGAAAGACGAGA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACTTGTCCCACTGCGGTaGACTCTGACTCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLVPLR*TLTPLW
Trigger: CCAAAGAGGAGTCAGAGTCAACCGCAGTGGGACAAG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTCTTCTGGCACAGACTTaGTTCCAGCTCCACCTCCCT +
Preference number: 5 (lower is better)
Translates to: NLPQTELGIKYCLRLEVILLAQT*FQLHLP
Trigger: AGGGAGGTGGAGCTGGAACAAAGTCTGTGCCAGAAG...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGTATCTGGGGACTCTTaGGTTAAGCCTCCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLVSGDS*VKPPEA
Trigger: TGCCTCAGGAGGCTTAACCAAAGAGTCCCCAGATAC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS TCA 90 bp TGGCTGTTTCTTCTGTACGTACAAACTGGTCAACGGCTGTCTGGATaGTGTTTTGGACAAGTTTACTGCTTTTGGTCTCAAGTTCCAAAA +
Preference number: 5 (lower is better)
Translates to: WLFLLYVQTGQRLSG*CFGQVYCFWSQVPK
Trigger: TTTTGGAACTTGAGACCAAAAGCAGTAAACTTGTCCAAAACATCATCCAGACAGCCGTTGACCAGTTTGTACGTACAGAAGAAACAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS CCA 90 bp CCAGCTGCTGATCATTTACAGTGGAACCTTCTACCTCAACAGTCATaGTCTTTTCTGAGGCTTCACTCATGTCTTTGGAAATATCAGAAT +
Preference number: 5 (lower is better)
Translates to: PAADHLQWNLLPQQS*SFLRLHSCLWKYQN
Trigger: ATTCTGATATTTCCAAAGACATGAGTGAAGCCTCAGAAAAGACCATGACTGTTGAGGTAGAAGGTTCCACTGTAAATGATCAGCAGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGAGGCTGAGCTCATCTaGCTCAGCTACGCCATTGAT +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFEAELI*LSYAID
Trigger: ATCAATGGCGTAGCTGAGCAAGATGAGCTCAGCCTC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253332.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAGAGGCTGAGCTCATCTaGCTCAGCTACGCCATTGAT +
Preference number: 5 (lower is better)
Translates to: KENIGTIYLCTERGNSWVEAELI*LSYAID
Trigger: ATCAATGGCGTAGCTGAGCAAGATGAGCTCAGCCTC...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATTGGGTTCGCTTTCTTaGGATGCTGCTTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLLGSLS*DAASPA
Trigger: GGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCAA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTTTGGGTTCGCTTTCTTaGGATGCTGCTTCTCCAGCC +
Preference number: 5 (lower is better)
Translates to: NLPQTELGIKYCLRLEVILGSLS*DAASPA
Trigger: GGCTGGAGAAGCAGCATCCAAAGAAAGCGAACCCAA...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAATTTCTGCGTGGCTTaGCTCACGCTTCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFNFCVA*LTLQGL
Trigger: GAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATT...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAAATTTCTGCGTGGCTTaGCTCACGCTTCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLNFCVA*LTLQGL
Trigger: GAGACCCTGAAGCGTGAGCAAAGCCACGCAGAAATT...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGGCGTCACCATCTTTTaGAATGATGCCCAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLGVTIF*NDAQGV
Trigger: CACTCCCTGGGCATCATTCAAAAAGATGGTGACGCC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGGCGTCACCATCTTTTaGAATGATGCCCAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFGVTIF*NDAQGV
Trigger: CACTCCCTGGGCATCATTCAAAAAGATGGTGACGCC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACAGGCGTCACCATCTTTTaGAATGATGCCCAGGGAGTG +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTGVTIF*NDAQGV
Trigger: CACTCCCTGGGCATCATTCAAAAAGATGGTGACGCC...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGCGTCTAACACGCTTCTaGGGCGTCACCATCTTTTTG +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSRLTRF*GVTIFL
Trigger: CAAAAAGATGGTGACGCCCAAGAAGCGTGTTAGACG...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTGACAAGGTAGCGCTCTaGACCTTGTCCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFDKVAL*TLSSSS
Trigger: AGATGAGCTGGACAAGGTCAAGAGCGCTACCTTGTC...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTTGCCCCAAACAGAACTAGGAATCAAATATTGTCTTCGACTAGAGGTAATTGACAAGGTAGCGCTCTaGACCTTGTCCAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: NLPQTELGIKYCLRLEVIDKVAL*TLSSSS
Trigger: AGATGAGCTGGACAAGGTCAAGAGCGCTACCTTGTC...AATTACCTCTAGTCGAAGACAATATTTGATTCCTAGTTCTGTTTGGGGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTATCCACCTTGCGCTTaGGTTCTTCCGGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFYPPCA*VLPALA
Trigger: AGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGATA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATATCCACCTTGCGCTTaGGTTCTTCCGGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTYPPCA*VLPALA
Trigger: AGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGATA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATATCCACCTTGCGCTTaGGTTCTTCCGGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLYPPCA*VLPALA
Trigger: AGCCAAAGCCGGAAGAACCAAAGCGCAAGGTGGATA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCTGTCCCCGTCTCTTaGTCTTTTCCGGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSVPVS*SFPASS
Trigger: TGATGAGGCCGGAAAAGACAAAGAGACGGGGACAGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTATCTGTCCCCGTCTCTTaGTCTTTTCCGGCCTCATCA +
Preference number: 5 (lower is better)
Translates to: KENIGTIYLCTERGNSWVSVPVS*SFPASS
Trigger: TGATGAGGCCGGAAAAGACAAAGAGACGGGGACAGA...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTTGAGTCCGCCTCTCTaGCTCTTCTATGTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSLSPPL*LFYVRY
Trigger: GTACCTGACATAGAAGAGCAAGAGAGGCGGACTCAA...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCTTGAGTCCGCCTCTCTaGCTCTTCTATGTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLLSPPL*LFYVRY
Trigger: GTACCTGACATAGAAGAGCAAGAGAGGCGGACTCAA...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTCCCCACCACCTTCCCTaGTGTAAAAGGCTCAGTTTT +
Preference number: 5 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSPHHLP*CKRLSF
Trigger: AAAACTGAGCCTTTTACACAAGGGAAGGTGGTGGGG...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCTCGTCTTTCTGGGTaGTGCCTGGTGCGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSRLSG*CLVRQS
Trigger: ACTTTGACGCACCAGGCACAACCCAGAAAGACGAGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTATCTCGTCTTTCTGGGTaGTGCCTGGTGCGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: KENIGTIYLCTERGNSWVSRLSG*CLVRQS
Trigger: ACTTTGACGCACCAGGCACAACCCAGAAAGACGAGA...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGAGTCCCCTCAGTCTTaGACAGAATGGATACAGTTT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVESPQS*TEWIQF
Trigger: AAACTGTATCCATTCTGTCAAAGACTGAGGGGACTC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTTTTCTCCCTTTCGACTaGAACTACCATCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVFLPFD*NYHLSL
Trigger: GAGAGAGAGATGGTAGTTCAAGTCGAAAGGGAGAAA...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTTCATTCACATGGGTaGGCTCTGCTTCTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLHSHG*ALLLFS
Trigger: AGAAAACAGAAGCAGAGCCAACCCATGTGAATGAAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCATTGCTACACTCACTTaGACCTCCTGGCAAGCAACC +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLIATLT*TSWQAT
Trigger: GGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAAT...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGATTGCTACACTCACTTaGACCTCCTGGCAAGCAACC +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSIATLT*TSWQAT
Trigger: GGTTGCTTGCCAGGAGGTCAAAGTGAGTGTAGCAAT...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGACTCTGACTCCTCTTaGGCTGAAGTAATTGGTGTT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVDSDSS*AEVIGV
Trigger: AACACCAATTACTTCAGCCAAAGAGGAGTCAGAGTC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTAGTATCTGGGGACTCTTaGGTTAAGCCTCCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLVSGDS*VKPPEA
Trigger: TGCCTCAGGAGGCTTAACCAAAGAGTCCCCAGATAC...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTAGTATCTGGGGACTCTTaGGTTAAGCCTCCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: KENIGTIYLCTERGNSWVVSGDS*VKPPEA
Trigger: TGCCTCAGGAGGCTTAACCAAAGAGTCCCCAGATAC...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS TCA 90 bp ATCATTTACAGTGGAACCTTCTACCTCAACAGTCATGGTCTTTTCTaGGGCTTCACTCATGTCTTTGGAAATATCAGAATGTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: IIYSGTFYLNSHGLF*GFTHVFGNIRMCLS
Trigger: GGACAAGCACATTCTGATATTTCCAAAGACATGAGTGAAGCCTCAGAAAAGACCATGACTGTTGAGGTAGAAGGTTCCACTGTAAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTGGGTTTCTCTGTAGATaGTTTGGGTTCGCTTTCTTT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVGFLCR*FGFAFF
Trigger: AAAGAAAGCGAACCCAAACAATCTACAGAGAAACCC...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTATCTTCTCCTTCCTCTTaGCATTCCTCCACTGCTTGG +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLSSPSS*HSSTAW
Trigger: CCAAGCAGTGGAGGAATGCAAAGAGGAAGGAGAAGA...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACATCTTCTCCTTCCTCTTaGCATTCCTCCACTGCTTGG +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTSSPSS*HSSTAW
Trigger: CCAAGCAGTGGAGGAATGCAAAGAGGAAGGAGAAGA...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTCTTCTCCTTCCTCTTaGCATTCCTCCACTGCTTGG +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFSSPSS*HSSTAW
Trigger: CCAAGCAGTGGAGGAATGCAAAGAGGAAGGAGAAGA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTATCAAGGGAAAATTGTAGGTTGGTCTTGGAAAGAGGAAATGTTAAATGGCTCGGCCACAACCTCTTCTaGGTGGACTTCTATTTTCTC +
Preference number: 5 (lower is better)
Translates to: LSRENCRLVLERGNVKWLGHNLF*VDFYFL
Trigger: GAGAAAATAGAAGTCCACCAAGAAGAGGTTGTGGCC...GAGCCATTTAACATTTCCTCTTTCCAAGACCAACCTACAATTTTCCCTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGAAACACACGTTTCTTaGAGCTTCACCAGCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSETHVS*SFTSSL
Trigger: CAAGGAGCTGGTGAAGCTCAAAGAAACGTGTGTTTC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTACGTCTAACACGCTTCTaGGGCGTCACCATCTTTTTG +
Preference number: 5 (lower is better)
Translates to: FLLLLVFTFWSSKQTMSLRLTRF*GVTIFL
Trigger: CAAAAAGATGGTGACGCCCAAGAAGCGTGTTAGACG...TAAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACGTCTAACACGCTTCTaGGGCGTCACCATCTTTTTG +
Preference number: 5 (lower is better)
Translates to: PNECVATLFLKEWHKYGTRLTRF*GVTIFL
Trigger: CAAAAAGATGGTGACGCCCAAGAAGCGTGTTAGACG...TGTGCCATATTTGTGCCATTCTTTTAAGAACAATGTTGCAACACATTCATTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AAGGAAAATATTGGAACAATTTATCTATGTACAGAGAGAGGCAACTCATGGGTACGTCTAACACGCTTCTaGGGCGTCACCATCTTTTTG +
Preference number: 5 (lower is better)
Translates to: KENIGTIYLCTERGNSWVRLTRF*GVTIFL
Trigger: CAAAAAGATGGTGACGCCCAAGAAGCGTGTTAGACG...TACCCATGAGTTGCCTCTCTCTGTACATAGATAAATTGTTCCAATATTTTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGTAGCGCTCTTGACCTaGTCCAGCTCATCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSVALLT*SSSSSL
Trigger: TAAAGAAGATGAGCTGGACAAGGTCAAGAGCGCTAC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCTCCTTGCTCTTTTCTaGGATGATCCCACACAAATT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVLLALF*DDPTQI
Trigger: AATTTGTGTGGGATCATCCAAGAAAAGAGCAAGGAG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TGTAGCAAGAACGTCAATCTGAAAAGCTACTGGTTTATTTCAGGAAAGCTATCTAAGAGGACCCTCTCCTaGCTCTTTTCTTGGATGATC +
Preference number: 5 (lower is better)
Translates to: CSKNVNLKSYWFISGKLSKRTLS*LFSWMI
Trigger: GATCATCCAAGAAAAGAGCAAGGAGAGGGTCCTCTT...AGATAGCTTTCCTGAAATAAACCAGTAGCTTTTCAGATTGACGTTCTTGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402676.7
CDS-3UTR CAA 90 bp AATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGTGGGTTCCAGGAATAAACTTCTaGATTGAGACCCAGGATTCT +
Preference number: 5 (lower is better)
Translates to: NCTLIRNVTSRRLCFSWVPGINF*IETQDS
Trigger: AGAATCCTGGGTCTCAATCAAGAAGTTTATTCCTGG...AACCCACGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTAAAGAATTGTACCTTGATCAGGAATGTTACATCTAGGAGGCTCTGTTTTTCGGGCTTCAGCTTCTACTaGTTCAAGAGGTTCTGTCAC +
Preference number: 5 (lower is better)
Translates to: LKNCTLIRNVTSRRLCFSGFSFY*FKRFCH
Trigger: GTGACAGAACCTCTTGAACAAGTAGAAGCTGAAGCC...CGAAAAACAGAGCCTCCTAGATGTAACATTCCTGATCAAGGTACAATTCTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp TTTTCTTCTACTACTTGTCTTCACATTCTGGTCTTCCAAACAGACAATGAGTTTTTGAGTCCGCCTCTCTaGCTCTTCTATGTCAGGTAC +
Preference number: 5 (lower is better)
Translates to: FSSTTCLHILVFQTDNEFLSPPL*LFYVRY
Trigger: GTACCTGACATAGAAGAGCAAGAGAGGCGGACTCAA...AAACTCATTGTCTGTTTGGAAGACCAGAATGTGAAGACAAGTAGTAGAAGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000253332.5
ENST00000354675.10
ENST00000359755.5
ENST00000402676.7
CDS-3UTR CAA 90 bp CCAAATGAATGTGTTGCAACATTGTTCTTAAAAGAATGGCACAAATATGGCACACCCCACCACCTTCCCTaGTGTAAAAGGCTCAGTTTT +