RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP10 (Homo sapiens)

Ensembl gene IDs: ENSG00000108599

Ensembl transcript IDs: ENST00000225737.11, ENST00000395536.7, ENST00000460046.2, ENST00000571858.1, ENST00000572155.1, ENST00000572341.5, ENST00000576896.5, ENST00000578898.1, ENST00000582611.5, ENST00000583951.1

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTaGCTCTCGGTGGGGCTGACTCACCTGCTTTGGAAGGACAAAGCA +
Preference number: 1 (lower is better)
Translates to: CSAEAASTTLPLKAA*LSVGLTHLLWKDKA
Trigger: TGCTTTGTCCTTCCAAAGCAGGTGAGTCAGCCCCACCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR TCA 90 bp ATACGTTTGAAGTTCTGGGTTACCTTCTCCATGGTTGTCCAGGCCTaGCGTAATGGAGTTGTGAAACAGTTGGGGAGTGGCCCACCTTCC +
Preference number: 1 (lower is better)
Translates to: IRLKFWVTFSMVVQA*RNGVVKQLGSGPPS
Trigger: GGAAGGTGGGCCACTCCCCAACTGTTTCACAACTCCATTACGTCAGGCCTGGACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR TCA 90 bp CTGTCCTGCTACTTGAAAAGGAGTCCATGTTGGCAGAAATGGCATTaGTTGCAACATGACTTGGTCCTGCAGCCTCCAGCAAGGCATGAT +
Preference number: 1 (lower is better)
Translates to: LSCYLKRSPCWQKWH*LQHDLVLQPPARHD
Trigger: ATCATGCCTTGCTGGAGGCTGCAGGACCAAGTCATGTTGCAATCAATGCCATTTCTGCCAACATGGACTCCTTTTCAAGTAGCAGGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
3UTR TCA 90 bp CTCCATGTGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTaGAAAGGAGTCCATGTTGGCAGAAATGGCATTGATTGCAACATG +
Preference number: 1 (lower is better)
Translates to: LHVAWLLLKCGCPAT*KGVHVGRNGIDCNM
Trigger: CATGTTGCAATCAATGCCATTTCTGCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAGCCACATGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571858.1
3UTR GCA 90 bp ACCAGGCCAGACTCAAGGCCTCTGCTCTTAATCACTTTGCTGGACTaGTTCAATTTCCACTGTGCTATTCTGCTTGGTTTTCCCACCTTA +
Preference number: 1 (lower is better)
Translates to: TRPDSRPLLLITLLD*FNFHCAILLGFPTL
Trigger: TAAGGTGGGAAAACCAAGCAGAATAGCACAGTGGAAATTGAAGCAGTCCAGCAAAGTGATTAAGAGCAGAGGCCTTGAGTCTGGCCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR GCA 90 bp TGTAGAGGAAGATTCTTGGGTTTCCATGGAAACTTGGTGAGTTCCTaGTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTC +
Preference number: 1 (lower is better)
Translates to: CRGRFLGFHGNLVSS*SGHFKTERMGTVTF
Trigger: GAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTTTCCATGGAAACCCAAGAATCTTCCTCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR CCA 90 bp TCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCTTTTTaGCAGCAAGCTGAGACTGGAAGTTATCTGCTGCCAACCAGAATT +
Preference number: 1 (lower is better)
Translates to: SWHHSVPPVHHIGPF*QQAETGSYLLPTRI
Trigger: AATTCTGGTTGGCAGCAGATAACTTCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR TCA 90 bp TGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGTGCAGTGAGTaGGTCTCTTACTATCCTAAAGAAAGGAGAAGAAAGACGACCAAC +
Preference number: 1 (lower is better)
Translates to: CVIPMQKPTEQKCSE*VSYYPKERRRKTTN
Trigger: GTTGGTCGTCTTTCTTCTCCTTTCTTTAGGATAGTAAGAGACTCACTCACTGCACTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR TCA 90 bp GACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGCTTaGTTTGGTCTCTTGAGTCTGGTAGTCCAGACAAGATCTGCCCAG +
Preference number: 1 (lower is better)
Translates to: DNSVVQDLFKGLRKA*FGLLSLVVQTRSAQ
Trigger: CTGGGCAGATCTTGTCTGGACTACCAGACTCAAGAGACCAAATCAAGCCTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
3UTR GCA 90 bp GTTTCATGCTTTTTAGATGGAGAGACAGGCTCAGCCAGTGAGCTCTaGTTCACTGTGTTTAGACTGTGTGCTCTTATTCGCGACCAAGTT +
Preference number: 1 (lower is better)
Translates to: VSCFLDGETGSASEL*FTVFRLCALIRDQV
Trigger: AACTTGGTCGCGAATAAGAGCACACAGTCTAAACACAGTGAAGCAGAGCTCACTGGCTGAGCCTGTCTCTCCATCTAAAAAGCATGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR TCA 90 bp TTGGAAGGACAAAGCAAACCACCTCTGGCACCTGCTTTACAATGCTaGTTAGGGATGAGTTACCACTACGAGTGTGCATCAAGTATCAGT +
Preference number: 1 (lower is better)
Translates to: LEGQSKPPLAPALQC*LGMSYHYECASSIS
Trigger: ACTGATACTTGATGCACACTCGTAGTGGTAACTCATCCCTAATCAGCATTGTAAAGCAGGTGCCAGAGGTGGTTTGCTTTGTCCTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR GCA 90 bp AGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTaGTTCCCAGAGGATGTGGTCCCTGTCTATTCCAGTAGGCTAAAA +
Preference number: 1 (lower is better)
Translates to: SYHYECASSISSMLI*FPEDVVPVYSSRLK
Trigger: TTTTAGCCTACTGGAATAGACAGGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR GCA 90 bp TTTGATTTCCTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATTaGCCCAAGTCACTGACTCTTCCAAATGTCATCTTCCCGGCATAT +
Preference number: 1 (lower is better)
Translates to: FDFLTSGSGSDSRMN*PKSLTLPNVIFPAY
Trigger: ATATGCCGGGAAGATGACATTTGGAAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAGGAAATCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578898.1
3UTR TCA 90 bp ACAGTTCCACTGGTCAGCACTTCAATCTGGTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTAAAGTGCTCTTGCTCCATTGCACTA +
Preference number: 1 (lower is better)
Translates to: TVPLVSTSIWYLQKW*LRRNSLKCSCSIAL
Trigger: TAGTGCAATGGAGCAAGAGCACTTTAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATACCAGATTGAAGTGCTGACCAGTGGAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR GCA 90 bp ACCTGCTTTACAATGCTGATTAGGGATGAGTTACCACTACGAGTGTaGATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGT +
Preference number: 1 (lower is better)
Translates to: TCFTMLIRDELPLRV*IKYQFYAYLLPRGC
Trigger: ACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTCATCCCTAATCAGCATTGTAAAGCAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CCA 90 bp GAACATCATGTGCATCAATTATGCCTACAGGTAACTGCATTATGGTaGAAGTCTAGGATTGTCTCCCATTCTCTCCTGGAAACAACAGTG +
Preference number: 1 (lower is better)
Translates to: EHHVHQLCLQVTALW*KSRIVSHSLLETTV
Trigger: CACTGTTGTTTCCAGGAGAGAATGGGAGACAATCCTAGACTTCCACCATAATGCAGTTACCTGTAGGCATAATTGATGCACATGATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR GCA 90 bp GTATCTTTAAGACTCTCACTGTGTGAACATCATGTGCATCAATTATaGCTACAGGTAACTGCATTATGGTGGAAGTCTAGGATTGTCTCC +
Preference number: 1 (lower is better)
Translates to: VSLRLSLCEHHVHQL*LQVTALWWKSRIVS
Trigger: GGAGACAATCCTAGACTTCCACCATAATGCAGTTACCTGTAGGCATAATTGATGCACATGATGTTCACACAGTGAGAGTCTTAAAGATAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR GCA 90 bp GCCTCTGCTCTTAATCACTTTGCTGGACTGCTTCAATTTCCACTGTaGTATTCTGCTTGGTTTTCCCACCTTATATTTTATGAGTTCTAC +
Preference number: 1 (lower is better)
Translates to: ASALNHFAGLLQFPL*YSAWFSHLIFYEFY
Trigger: GTAGAACTCATAAAATATAAGGTGGGAAAACCAAGCAGAATAGCACAGTGGAAATTGAAGCAGTCCAGCAAAGTGATTAAGAGCAGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR TCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGGGCTCTCGGTGGGGCTaGCTCACCTGCTTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKGSRWG*LTCFGR
Trigger: CCTTCCAAAGCAGGTGAGTCAGCCCCACCGAGAGCC...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CAA 90 bp GCCACTCAAAGCTGCCTGGCTCTCGGTGGGGCTGACTCACCTGCTTaGGAAGGACAAAGCAAACCACCTCTGGCACCTGCTTTACAATGC +
Preference number: 2 (lower is better)
Translates to: ATQSCLALGGADSPA*EGQSKPPLAPALQC
Trigger: GCATTGTAAAGCAGGTGCCAGAGGTGGTTTGCTTTGTCCTTCCAAAGCAGGTGAGTCAGCCCCACCGAGAGCCAGGCAGCTTTGAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTGACTCACCTGCTTTaGAAGGACAAAGCAAACCAC +
Preference number: 2 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWLTHLL*KDKANH
Trigger: GTGGTTTGCTTTGTCCTTCCAAAGCAGGTGAGTCAG...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR TCA 90 bp TCCATGTGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGGGAATGTACGGATATTaGAGGGCCGGGTGCGGTGGC +
Preference number: 2 (lower is better)
Translates to: SMWLGCFLSVAVLLLEKEGMYGY*RAGCGG
Trigger: GCCACCGCACCCGGCCCTTCAATATCCGTACATTCC...CTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAGCCACATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
3UTR-3UTR TCA 90 bp TGGAAACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACGACAGGCTCAGCCAGTaGGCTCTGCTTCACTGTGTT +
Preference number: 2 (lower is better)
Translates to: WKLGEFLLWPFQDGENGHDRLSQ*ALLHCV
Trigger: AACACAGTGAAGCAGAGCTCACTGGCTGAGCCTGTC...GTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR GCA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGAGTTCTATGCTTATCTaGTTCCCAGAGGATGTGGTC +
Preference number: 2 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKSSMLI*FPEDVV
Trigger: GACCACATCCTCTGGGAAGCAGATAAGCATAGAACT...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CCA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGAAAGCAAACCACCTCTaGCACCTGCTTTACAATGCT +
Preference number: 2 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKKANHL*HLLYNA
Trigger: AGCATTGTAAAGCAGGTGCCAGAGGTGGTTTGCTTT...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR GCA 90 bp AACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCTCAGCCAGTGAGCTCTaGTTCACTGTGTTTAGACTG +
Preference number: 2 (lower is better)
Translates to: NLVSSCSGHFKTERMGTVSASEL*FTVFRL
Trigger: CAGTCTAAACACAGTGAAGCAGAGCTCACTGGCTGA...GACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR CCA 90 bp GTTATGTGGCACGTGACTGTACATACCAGGCCAGACTCAAGGCCTCTGCTCTTAATCCAAGAGGATGTGTaGCTTGGAGGGAGAAGTACT +
Preference number: 2 (lower is better)
Translates to: VMWHVTVHTRPDSRPLLLIQEDV*LGGRST
Trigger: AGTACTTCTCCCTCCAAGCCACACATCCTCTTGGAT...TAAGAGCAGAGGCCTTGAGTCTGGCCTGGTATGTACAGTCACGTGCCACATAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR CCA 90 bp ATGTGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCGATTGCAACATGACTTaGTCCTGCAGCCTCCAGCAA +
Preference number: 2 (lower is better)
Translates to: MWLGCFLSVAVLLLEKESDCNMT*SCSLQQ
Trigger: TTGCTGGAGGCTGCAGGACCAAGTCATGTTGCAATC...GGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAGCCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
3UTR-3UTR TCA 90 bp AACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCTCGCGACCAAGTTGTTaGATGAAAACTTTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: NLVSSCSGHFKTERMGTVSRPSC*MKTFSL
Trigger: GAGGCTGAAAGTTTTCATTCAACAACTTGGTCGCGA...GACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR CCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAACCACAGGGGCAAAAGTaGAGTCATCGCTATTTCTTT +
Preference number: 2 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQPQGQK*SHRYFF
Trigger: AAAGAAATAGCGATGACTCCACTTTTGCCCCTGTGG...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CCA 90 bp GAAGTAAGGGAGGACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGGCCTCCATGTGGCTTaGCTGCTTCTTAAGTGTGGC +
Preference number: 2 (lower is better)
Translates to: EVREDNSVVQDLFKGLRKGLHVA*LLLKCG
Trigger: GCCACACTTAAGAAGCAGCCAAGCCACATGGAGGCC...CTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTCCTCCCTTACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
3UTR-3UTR TCA 90 bp TTCCATGAATTGAATGAAGTAAGGGAGGACAATAGTGTCGTGCAAGACTTGTTCCCCAGGTCACCAAAATaGGCGGCCTCCATGTGGCTT +
Preference number: 2 (lower is better)
Translates to: FHELNEVREDNSVVQDLFPRSPK*AASMWL
Trigger: AAGCCACATGGAGGCCGCTCATTTTGGTGACCTGGG...GAACAAGTCTTGCACGACACTATTGTCCTCCCTTACTTCATTCAATTCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572341.5
3UTR-3UTR GCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGTGTGTGAACATCATGTaGATCAATTATGCCTACAGG +
Preference number: 2 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKCVNIM*INYAYR
Trigger: CCTGTAGGCATAATTGATGCACATGATGTTCACACA...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR GCA 90 bp ACATCAGGTTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTGACTCTTTTCTGGATCCAGACTTaGCGCATCCACAATTATCGC +
Preference number: 2 (lower is better)
Translates to: TSGSGSDSRMNCPKSLTLFWIQT*RIHNYR
Trigger: GCGATAATTGTGGATGCGGCAAGTCTGGATCCAGAA...AAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578898.1
3UTR-3UTR CCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATACCACTCAAAGCTGCCTaGCTCTCGGTGGGGCTGACT +
Preference number: 2 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIPLKAA*LSVGLT
Trigger: AGTCAGCCCCACCGAGAGCCAGGCAGCTTTGAGTGG...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CCA 90 bp TTTGATACGTTTGAAGTTCTGGGTTACCTTCTCCATGGTTGTCCAGGCCTGACGAGAGGATGTGTGGCTTaGAGGGAGAAGTACTTGTCA +
Preference number: 2 (lower is better)
Translates to: FDTFEVLGYLLHGCPGLTRGCVA*REKYLS
Trigger: TGACAAGTACTTCTCCCTCCAAGCCACACATCCTCT...CGTCAGGCCTGGACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR CAA 90 bp AGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAAGATTCTaGGGTTTCCATGGAAACTTGGTGAGTTCCTGCTCTGGCCATTTC +
Preference number: 2 (lower is better)
Translates to: SGTISTGYCKCRGRF*GFHGNLVSSCSGHF
Trigger: GAAATGGCCAGAGCAGGAACTCACCAAGTTTCCATGGAAACCCAAGAATCTTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR TCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATACTCAATCATGTGCATTaGGGAAGCGCTGGCGCCACG +
Preference number: 2 (lower is better)
Translates to: NLHKAFLLLLSMKQCASILNHVH*GSAGAT
Trigger: CGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAG...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR TCA 90 bp TCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGCAGGTCAATTCCTTCTaGATGAGTCATAAACAACTG +
Preference number: 2 (lower is better)
Translates to: SGHFKTERMGTVTFLGKQQVNSF*MSHKQL
Trigger: CAGTTGTTTATGACTCATTCAGAAGGAATTGACCTG...CTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR GCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGTTACCACTACGAGTGTaGATCAAGTATCAGTTCTAT +
Preference number: 2 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKLPLRV*IKYQFY
Trigger: ATAGAACTGATACTTGATGCACACTCGTAGTGGTAA...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR GCA 90 bp TGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCATGAGAAATGGCATTGATTaGAACATGACTTGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: WLGCFLSVAVLLLEKESMRNGID*NMTWSC
Trigger: GCAGGACCAAGTCATGTTGCAATCAATGCCATTTCT...CATGGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
3UTR-3UTR CCA 90 bp AGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAAGATTCTTCAAGACGGAGAGAATaGGCACTGTCACATTCCTGG +
Preference number: 2 (lower is better)
Translates to: SGEAGLFLLATVSVEEDSSRRRE*ALSHSW
Trigger: CCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGA...AGAATCTTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR CAA 90 bp TGCTCCATTGCACTAAAGACTATGGACTGTGCCAAAACGAAACAGTaGGGATCCACCTGTCCATCTTCTCCACAAATCCTTGCTATGATG +
Preference number: 2 (lower is better)
Translates to: CSIALKTMDCAKTKQ*GSTCPSSPQILAMM
Trigger: CATCATAGCAAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACAGTCCATAGTCTTTAGTGCAATGGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR TCA 90 bp TGTGCCAAAACGAAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTCATAAACAACTGTGCTaGGCCAGAATCCTCCAATCT +
Preference number: 2 (lower is better)
Translates to: CAKTKQLGSTCPSSPQILHKQLC*ARILQS
Trigger: AGATTGGAGGATTCTGGCTCAGCACAGTTGTTTATG...AAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR GCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATAGTGGTCAATGGAGTGTaGTCACCAACTGGGCAGTCC +
Preference number: 2 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIVVNGV*SPTGQS
Trigger: GGACTGCCCAGTTGGTGAGCACACTCCATTGACCAC...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CCA 90 bp GTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGTGGTCCCCAGGTAACTGCATTATaGTGGAAGTCTAGGATTGTC +
Preference number: 2 (lower is better)
Translates to: VCIKYQFYAYLLPRGCGPQVTAL*WKSRIV
Trigger: GACAATCCTAGACTTCCACCATAATGCAGTTACCTG...GGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CAA 90 bp GGAGTTGTGAAACAGTTGGGGAGTGGCCCACCTTCCCTGCAGATATaGGATTCAATTTCTAATCGTACAACATCATCAAATCCAAGAGGA +
Preference number: 2 (lower is better)
Translates to: GVVKQLGSGPPSLQI*DSISNRTTSSNPRG
Trigger: TCCTCTTGGATTTGATGATGTTGTACGATTAGAAATTGAATCCAATATCTGCAGGGAAGGTGGGCCACTCCCCAACTGTTTCACAACTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR TCA 90 bp ACCCTTCTGTTAGCAGGGGAGAGAATGGTTTTAAGTATAGTGCATCTCAGGAGGTTTCATTGGCTGTGTTaGAGAATCCAACCAAGGGAA +
Preference number: 2 (lower is better)
Translates to: TLLLAGERMVLSIVHLRRFHWLC*RIQPRE
Trigger: TTCCCTTGGTTGGATTCTTCAACACAGCCAATGAAA...CCTCCTGAGATGCACTATACTTAAAACCATTCTCTCCCCTGCTAACAGAAGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR TCA 90 bp ATTTTAGCAATCTTCCAAGCTAGCTCTTCCTGGGCCTCATCAGTATTTCCTTGCATTGCCCCAAGTCACTaGCTCTTCCAAATGTCATCT +
Preference number: 2 (lower is better)
Translates to: ILAIFQASSSWASSVFPCIAPSH*LFQMSS
Trigger: AGATGACATTTGGAAGAGTCAGTGACTTGGGGCAAT...GCAAGGAAATACTGATGAGGCCCAGGAAGAGCTAGCTTGGAAGATTGCTAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578898.1
3UTR-3UTR GCA 90 bp GTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGTGGTCCCCATGTGCATCAATTATaGCTACAGGTAACTGCATTA +
Preference number: 2 (lower is better)
Translates to: VCIKYQFYAYLLPRGCGPHVHQL*LQVTAL
Trigger: TAATGCAGTTACCTGTAGGCATAATTGATGCACATG...GGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR GCA 90 bp ACCCTTCTGTTAGCAGGGGAGAGAATGGTTTTAAGTATAGTGCATCTCAGGAGGGTGAAAACTATATACTaGCATCAGAGGAAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: TLLLAGERMVLSIVHLRRVKTIY*HQRKEE
Trigger: TTCCTCCTTCCTCTGATGGCAGTATATAGTTTTCAC...CCTCCTGAGATGCACTATACTTAAAACCATTCTCTCCCCTGCTAACAGAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR GCA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTTTCCTCTCAATCATGTaGATTGAGGAAGCGCTGGCG +
Preference number: 2 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASFLSIM*IEEALA
Trigger: CGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAA...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CCA 90 bp ATTATTGCACTACCAGCTTTGATCCATTATAATCGTACAGGACCATCGTACACGCATATTGGCCCTTTTTaGCAGCAAGCTGAGACTGGA +
Preference number: 2 (lower is better)
Translates to: IIALPALIHYNRTGPSYTHIGPF*QQAETG
Trigger: TCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAATATG...CGTGTACGATGGTCCTGTACGATTATAATGGATCAAAGCTGGTAGTGCAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR CCA 90 bp ACTTCTTGTAGTTTGATACGTTTGAAGTTCTGGGTTACCTTCTCCATGGTTGTCTCCTGTCCATCATATTaGCCCTTTTTGGCAGCAAGC +
Preference number: 2 (lower is better)
Translates to: TSCSLIRLKFWVTFSMVVSCPSY*PFLAAS
Trigger: GCTTGCTGCCAAAAAGGGCCAATATGATGGACAGGA...GACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTATCAAACTACAAGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR TCA 90 bp AGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAAGATTCTGACCAAGTTGTTGAATaGAAACTTTCAGCCTCTAAC +
Preference number: 2 (lower is better)
Translates to: SGEAGLFLLATVSVEEDSDQVVE*KLSASN
Trigger: GTTAGAGGCTGAAAGTTTTCATTCAACAACTTGGTC...AGAATCTTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR GCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATAACCACCTCTGGCACCTaGTTTACAATGCTGATTAGG +
Preference number: 2 (lower is better)
Translates to: NLHKAFLLLLSMKQCASITTSGT*FTMLIR
Trigger: CCTAATCAGCATTGTAAAGCAGGTGCCAGAGGTGGT...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR GCA 90 bp AAATTTCACCAAATGCTCCATTCGCCGAAGTTCCATGAATTGAATGAAGTAAGGAGTCCAGACAAGATCTaGCCAGGTCACCAAAATGAG +
Preference number: 2 (lower is better)
Translates to: KFHQMLHSPKFHELNEVRSPDKI*PGHQNE
Trigger: CTCATTTTGGTGACCTGGGCAGATCTTGTCTGGACT...CCTTACTTCATTCAATTCATGGAACTTCGGCGAATGGAGCATTTGGTGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572341.5
3UTR-3UTR CCA 90 bp TTTGATACGTTTGAAGTTCTGGGTTACCTTCTCCATGGTTGTCCAGGCCTGACGCTTCCCTGCAGATATTaGATTCAATTTCTAATCGTA +
Preference number: 2 (lower is better)
Translates to: FDTFEVLGYLLHGCPGLTLPCRY*IQFLIV
Trigger: TACGATTAGAAATTGAATCCAATATCTGCAGGGAAG...CGTCAGGCCTGGACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR TCA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTCTGAAACTTGACCCATaGCTTGTCAGTTTCCTTCCA +
Preference number: 2 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASLKLDP*LVSFLP
Trigger: TGGAAGGAAACTGACAAGTCATGGGTCAAGTTTCAG...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR GCA 90 bp GTCATTTCTCATTGCTTCTGTAATTGGTATTGGTTTAGCAGCATCTGGAGATATAACTTGGTGAGTTCCTaGTCTGGCCATTTCAAGACG +
Preference number: 2 (lower is better)
Translates to: VISHCFCNWYWFSSIWRYNLVSS*SGHFKT
Trigger: CGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTT...ATATCTCCAGATGCTGCTAAACCAATACCAATTACAGAAGCAATGAGAAATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR CCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAGCTTCCCAGAGGATGTaGTCCCTGTCTATTCCAGTA +
Preference number: 2 (lower is better)
Translates to: FGKINIFQQKSHKCPESRASQRM*SLSIPV
Trigger: TACTGGAATAGACAGGGACCACATCCTCTGGGAAGC...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAGCTCACAGCAAAGAATaGGGGAGGCAGTCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: FGKINIFQQKSHKCPESRAHSKE*GRQSKS
Trigger: TGACTTTGACTGCCTCCCCCATTCTTTGCTGTGAGC...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR TCA 90 bp CTTCAATTTCCACTGTGCTATTCTGCTTGGTTTTCCCACCTTATATTTTATGAGTTTTTGGCAGCAAGCTaGGACTGGAAGTTATCTGCT +
Preference number: 2 (lower is better)
Translates to: LQFPLCYSAWFSHLIFYEFLAAS*DWKLSA
Trigger: AGCAGATAACTTCCAGTCTCAGCTTGCTGCCAAAAA...CTCATAAAATATAAGGTGGGAAAACCAAGCAGAATAGCACAGTGGAAATTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR CCA 90 bp ATTATTGCACTACCAGCTTTGATCCATTATAATCGTACAGGACCATCGTACACGATACGTTTGAAGTTCTaGGTTACCTTCTCCATGGTT +
Preference number: 2 (lower is better)
Translates to: IIALPALIHYNRTGPSYTIRLKF*VTFSMV
Trigger: AACCATGGAGAAGGTAACCCAGAACTTCAAACGTAT...CGTGTACGATGGTCCTGTACGATTATAATGGATCAAAGCTGGTAGTGCAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR TCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGACAGAAGTGCAGTGAGTaGGTCTCTTACTATCCTAAA +
Preference number: 2 (lower is better)
Translates to: FGKINIFQQKSHKCPESRQKCSE*VSYYPK
Trigger: TTTAGGATAGTAAGAGACTCACTCACTGCACTTCTG...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CAA 90 bp ATAACAGAGGTGGTACATAGTACCAAAAACTTACACAAAGCCTTTTaGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATACAATCAAAT +
Preference number: 2 (lower is better)
Translates to: ITEVVHSTKNLHKAF*LLLSMKQCASIQSN
Trigger: ATTTGATTGTATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTTGGTACTATGTACCACCTCTGTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CCA 72 bp GAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTaGCTCTCGGTGGGGCTGACTCACCTGCTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: EAASTTLPLKAA*LSVGLTHLLWK
Trigger: CTTCCAAAGCAGGTGAGTCAGCCCCACCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR TCA 72 bp CGCTGCCACTCAAAGCTGCCTGGCTCTCGGTGGGGCTaGCTCACCTGCTTTGGAAGGACAAAGCAAACCACC +
Preference number: 3 (lower is better)
Translates to: RCHSKLPGSRWG*LTCFGRTKQTT
Trigger: GGTGGTTTGCTTTGTCCTTCCAAAGCAGGTGAGTCAGCCCCACCGAGAGCCAGGCAGCTTTGAGTGGCAGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR TCA 72 bp TCTCCATGGTTGTCCAGGCCTGACGTAATGGAGTTGTaGAACAGTTGGGGAGTGGCCCACCTTCCCTGCAGA +
Preference number: 3 (lower is better)
Translates to: SPWLSRPDVMEL*NSWGVAHLPCR
Trigger: TCTGCAGGGAAGGTGGGCCACTCCCCAACTGTTTCACAACTCCATTACGTCAGGCCTGGACAACCATGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR CAA 90 bp GTTATGTGGCACGTGACTGTACATACCAGGCCAGACTCAAGGCCTCTGCTCTTACTCCTGTCCATCATATaGGCCCTTTTTGGCAGCAAG +
Preference number: 3 (lower is better)
Translates to: VMWHVTVHTRPDSRPLLLLLSII*ALFGSK
Trigger: CTTGCTGCCAAAAAGGGCCAATATGATGGACAGGAG...TAAGAGCAGAGGCCTTGAGTCTGGCCTGGTATGTACAGTCACGTGCCACATAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR TCA 72 bp CGCAGTCCACTGTTGACTAAAATGTTATGTGGCACGTaGCTGTACATACCAGGCCAGACTCAAGGCCTCTGC +
Preference number: 3 (lower is better)
Translates to: RSPLLTKMLCGT*LYIPGQTQGLC
Trigger: GCAGAGGCCTTGAGTCTGGCCTGGTATGTACAGTCACGTGCCACATAACATTTTAGTCAACAGTGGACTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR CCA 72 bp TTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTaGCGCCACGTGGTCAATGGAGTGTGCTCACCAACT +
Preference number: 3 (lower is better)
Translates to: FLSSQSCALRKR*RHVVNGVCSPT
Trigger: AGTTGGTGAGCACACTCCATTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CCA 72 bp CATTCTGTGCCTCCTGTCCATCATATTGGCCCTTTTTaGCAGCAAGCTGAGACTGGAAGTTATCTGCTGCCA +
Preference number: 3 (lower is better)
Translates to: HSVPPVHHIGPF*QQAETGSYLLP
Trigger: TGGCAGCAGATAACTTCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAATATGATGGACAGGAGGCACAGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR CAA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCGGTGGAAGTCTAGGATaGTCTCCCATTCTCTCCTGG +
Preference number: 3 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPGGSLG*SPILSW
Trigger: CCAGGAGAGAATGGGAGACAATCCTAGACTTCCACC...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CAA 90 bp TTCCTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTGATTCTGGATCCAGACTaGCCGCATCCACAATTATCG +
Preference number: 3 (lower is better)
Translates to: FLTSGSGSDSRMNCPKSLILDPD*PHPQLS
Trigger: CGATAATTGTGGATGCGGCAAGTCTGGATCCAGAAT...CAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
3UTR TCA 72 bp CAAAGCAAACCACCTCTGGCACCTGCTTTACAATGCTaGTTAGGGATGAGTTACCACTACGAGTGTGCATCA +
Preference number: 3 (lower is better)
Translates to: QSKPPLAPALQC*LGMSYHYECAS
Trigger: TGATGCACACTCGTAGTGGTAACTCATCCCTAATCAGCATTGTAAAGCAGGTGCCAGAGGTGGTTTGCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR TCA 72 bp TCCTGTCCATCATATTGGCCCTTTTTGGCAGCAAGCTaGGACTGGAAGTTATCTGCTGCCAACCAGAATTGT +
Preference number: 3 (lower is better)
Translates to: SCPSYWPFLAAS*DWKLSAANQNC
Trigger: ACAATTCTGGTTGGCAGCAGATAACTTCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAATATGATGGACAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR TCA 72 bp TACTTGAAAAGGAGTCCATGTTGGCAGAAATGGCATTaGTTGCAACATGACTTGGTCCTGCAGCCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: YLKRSPCWQKWH*LQHDLVLQPPA
Trigger: TGCTGGAGGCTGCAGGACCAAGTCATGTTGCAATCAATGCCATTTCTGCCAACATGGACTCCTTTTCAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
3UTR TCA 72 bp ACTCTTCCAAATGTCATCTTCCCGGCATATGTCCGTTaGTATAAAGATTCTGGATCCAGACTTGCCGCATCC +
Preference number: 3 (lower is better)
Translates to: TLPNVIFPAYVR*YKDSGSRLAAS
Trigger: GGATGCGGCAAGTCTGGATCCAGAATCTTTATATCAACGGACATATGCCGGGAAGATGACATTTGGAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578898.1
3UTR TCA 72 bp GTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGCTTaGTTTGGTCTCTTGAGTCTGGTAGTCCAGACAAGA +
Preference number: 3 (lower is better)
Translates to: VVQDLFKGLRKA*FGLLSLVVQTR
Trigger: TCTTGTCTGGACTACCAGACTCAAGAGACCAAATCAAGCCTTTCTAAGACCCTTGAACAAGTCTTGCACGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
3UTR GCA 72 bp TACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTaGTTCCCAGAGGATGTGGTCCCTGTCTATTCCAGT +
Preference number: 3 (lower is better)
Translates to: YECASSISSMLI*FPEDVVPVYSS
Trigger: ACTGGAATAGACAGGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR GCA 72 bp CTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATTaGCCCAAGTCACTGACTCTTCCAAATGTCATCTTC +
Preference number: 3 (lower is better)
Translates to: LTSGSGSDSRMN*PKSLTLPNVIF
Trigger: GAAGATGACATTTGGAAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578898.1
3UTR-3UTR CAA 90 bp GTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGTGGTCCCATAGTGCTGTTTTCATaGGCTGTGTTGAAGAATCCA +
Preference number: 3 (lower is better)
Translates to: VCIKYQFYAYLLPRGCGPIVLFS*AVLKNP
Trigger: TGGATTCTTCAACACAGCCAATGAAAACAGCACTAT...GGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CAA 90 bp TGTGCCAAAACGAAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTTGTAGAGGAAGATTCTaGGGTTTCCATGGAAACTTG +
Preference number: 3 (lower is better)
Translates to: CAKTKQLGSTCPSSPQILCRGRF*GFHGNL
Trigger: CAAGTTTCCATGGAAACCCAAGAATCTTCCTCTACA...AAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR TCA 72 bp CTGGTCAGCACTTCAATCTGGTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTAAAGTGCTCTTGCTCC +
Preference number: 3 (lower is better)
Translates to: LVSTSIWYLQKW*LRRNSLKCSCS
Trigger: GGAGCAAGAGCACTTTAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATACCAGATTGAAGTGCTGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR-3UTR CAA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATAGCTGACTCACCTGCTTaGGAAGGACAAAGCAAACCA +
Preference number: 3 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIADSPA*EGQSKP
Trigger: TGGTTTGCTTTGTCCTTCCAAAGCAGGTGAGTCAGC...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR-3UTR CAA 90 bp GACTGCTTCAATTTCCACTGTGCTATTCTGCTTGGTTTTCCCACCTTATATTTTTTACCTTCTCCATGGTaGTCCAGGCCTGACGTAATG +
Preference number: 3 (lower is better)
Translates to: DCFNFHCAILLGFPTLYFLPSPW*SRPDVM
Trigger: CATTACGTCAGGCCTGGACAACCATGGAGAAGGTAA...AAAATATAAGGTGGGAAAACCAAGCAGAATAGCACAGTGGAAATTGAAGCAGTC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR GCA 72 bp ACAATGCTGATTAGGGATGAGTTACCACTACGAGTGTaGATCAAGTATCAGTTCTATGCTTATCTGCTTCCC +
Preference number: 3 (lower is better)
Translates to: TMLIRDELPLRV*IKYQFYAYLLP
Trigger: GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTCATCCCTAATCAGCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CCA 72 bp AACAGTTGGGGAGTGGCCCACCTTCCCTGCAGATATTaGATTCAATTTCTAATCGTACAACATCATCAAATC +
Preference number: 3 (lower is better)
Translates to: NSWGVAHLPCRY*IQFLIVQHHQI
Trigger: GATTTGATGATGTTGTACGATTAGAAATTGAATCCAATATCTGCAGGGAAGGTGGGCCACTCCCCAACTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR CCA 72 bp CGTACAACATCATCAAATCCAAGAGGATGTGTGGCTTaGAGGGAGAAGTACTTGTCATATAAAATCATGGCA +
Preference number: 3 (lower is better)
Translates to: RTTSSNPRGCVA*REKYLSYKIMA
Trigger: TGCCATGATTTTATATGACAAGTACTTCTCCCTCCAAGCCACACATCCTCTTGGATTTGATGATGTTGTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR CAA 90 bp ATTATTGCACTACCAGCTTTGATCCATTATAATCGTACAGGACCATCGTACACGTGGAGGGAGAAGTACTaGTCATATAAAATCATGGCA +
Preference number: 3 (lower is better)
Translates to: IIALPALIHYNRTGPSYTWREKY*SYKIMA
Trigger: TGCCATGATTTTATATGACAAGTACTTCTCCCTCCA...CGTGTACGATGGTCCTGTACGATTATAATGGATCAAAGCTGGTAGTGCAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR TCA 72 bp CTGTTAGTTCTATTATTCAGGTCAATTCCTTCTGAATaGGTCATAAACAACTGTGCTGAGCCAGAATCCTCC +
Preference number: 3 (lower is better)
Translates to: LLVLLFRSIPSE*VINNCAEPESS
Trigger: GGAGGATTCTGGCTCAGCACAGTTGTTTATGACTCATTCAGAAGGAATTGACCTGAATAATAGAACTAACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR CCA 72 bp CTAATCGTACAACATCATCAAATCCAAGAGGATGTGTaGCTTGGAGGGAGAAGTACTTGTCATATAAAATCA +
Preference number: 3 (lower is better)
Translates to: LIVQHHQIQEDV*LGGRSTCHIKS
Trigger: TGATTTTATATGACAAGTACTTCTCCCTCCAAGCCACACATCCTCTTGGATTTGATGATGTTGTACGATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR-3UTR CAA 90 bp CTTCAATTTCCACTGTGCTATTCTGCTTGGTTTTCCCACCTTATATTTTATGAGCCTTCCCTGCAGATATaGGATTCAATTTCTAATCGT +
Preference number: 3 (lower is better)
Translates to: LQFPLCYSAWFSHLIFYEPSLQI*DSISNR
Trigger: ACGATTAGAAATTGAATCCAATATCTGCAGGGAAGG...CTCATAAAATATAAGGTGGGAAAACCAAGCAGAATAGCACAGTGGAAATTGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR GCA 90 bp GTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTCTCGGGTCCAGAGGGGCCGCTaGACTAGCGCGAAAAGGGAC +
Preference number: 4 (lower is better)
Translates to: VPLKLLAPRCHSKLPGSRVQRGR*TSAKRD
Trigger: GTCCCTTTTCGCGCTAGTGCAGCGGCCCCTCTGGAC...CCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGGGCTCTCGGTGGGGCTaGCTCACCTGCTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWGSRWG*LTCFGR
Trigger: CCTTCCAAAGCAGGTGAGTCAGCCCCACCGAGAGCC...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp GTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTCTCGGAGCGCTGGCGCCACGTaGTCAATGGAGTGTGCTCAC +
Preference number: 4 (lower is better)
Translates to: VPLKLLAPRCHSKLPGSRSAGAT*SMECAH
Trigger: GTGAGCACACTCCATTGACCACGTGGCGCCAGCGCT...CCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGACCGCCTCCTCGGGATaGCCAGGCAGCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKTASSG*PGSSSR
Trigger: GCGGCTGGAGCTGCCTGGGCATCCCGAGGAGGCGGT...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGACCGCCTCCTCGGGATaGCCAGGCAGCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGHFKTERMGTVTFLGKQTASSG*PGSSSR
Trigger: GCGGCTGGAGCTGCCTGGGCATCCCGAGGAGGCGGT...CTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp GTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTCTCGGGTGGTCAATGGAGTGTaGTCACCAACTGGGCAGTCC +
Preference number: 4 (lower is better)
Translates to: VPLKLLAPRCHSKLPGSRVVNGV*SPTGQS
Trigger: GGACTGCCCAGTTGGTGAGCACACTCCATTGACCAC...CCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp GCCTCCATGTGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGCCCTTCTTCCGGGAGTaGGCCCCACCGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: ASMWLGCFLSVAVLLLEKPFFRE*APPPPR
Trigger: CCGAGGAGGCGGTGGGGCCCACTCCCGGAAGAAGGG...CTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAGCCACATGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR GCA 90 bp ATGTGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCACCGCCTCCTCGGGATaGCCAGGCAGCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: MWLGCFLSVAVLLLEKESTASSG*PGSSSR
Trigger: GCGGCTGGAGCTGCCTGGGCATCCCGAGGAGGCGGT...GGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAGCCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR CCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGAGTGTGCTCACCAACTaGGCAGTCCTGCTGATGGCT +
Preference number: 4 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWSVLTN*AVLLMA
Trigger: AGCCATCAGCAGGACTGCCCAGTTGGTGAGCACACT...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp GTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGTGGTCCCGCCGGAAGAAGGACATaGCGGGGCCCGGGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: VCIKYQFYAYLLPRGCGPAGRRT*RGPGRD
Trigger: GTCCCGACCCGGGCCCCGCCATGTCCTTCTTCCGGC...GGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTCTCGGAGTCCAGACAAGATCTaGCCAGGTCACCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: VPLKLLAPRCHSKLPGSRSPDKI*PGHQNE
Trigger: CTCATTTTGGTGACCTGGGCAGATCTTGTCTGGACT...CCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGTTCCTCTCAATCATGTaGATTGAGGAAGCGCTGGCG +
Preference number: 4 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWFLSIM*IEEALA
Trigger: CGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAA...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp ACCCTTCTGTTAGCAGGGGAGAGAATGGTTTTAAGTATAGTGCATCTCAGGAGGCCCTTCTTCCGGGAGTaGGCCCCACCGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TLLLAGERMVLSIVHLRRPFFRE*APPPPR
Trigger: CCGAGGAGGCGGTGGGGCCCACTCCCGGAAGAAGGG...CCTCCTGAGATGCACTATACTTAAAACCATTCTCTCCCCTGCTAACAGAAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGGATTGCAACATGACTTaGTCCTGCAGCCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWDCNMT*SCSLQQ
Trigger: TTGCTGGAGGCTGCAGGACCAAGTCATGTTGCAATC...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTCTCGGAGGACAATAGTGTCGTaGAAGACTTGTTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: VPLKLLAPRCHSKLPGSRRTIVS*KTCSRV
Trigger: GACCCTTGAACAAGTCTTGCACGACACTATTGTCCT...CCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGAACTTGGTGAGTTCCTaGTCTGGCCATTTCAAGACG +
Preference number: 4 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWNLVSS*SGHFKT
Trigger: CGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTT...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTCTCGGGTGCTCTTGCTCCATTaGACTAAAGACTATGGACTG +
Preference number: 4 (lower is better)
Translates to: VPLKLLAPRCHSKLPGSRVLLLH*TKDYGL
Trigger: CAGTCCATAGTCTTTAGTGCAATGGAGCAAGAGCAC...CCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp GAAGTAAGGGAGGACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGCCCTTCTTCCGGGAGTaGGCCCCACCGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: EVREDNSVVQDLFKGLRKPFFRE*APPPPR
Trigger: CCGAGGAGGCGGTGGGGCCCACTCCCGGAAGAAGGG...CTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTCCTCCCTTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR CCA 90 bp AGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAAGATTCTCCCTTCTTCCGGGAGTaGGCCCCACCGCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: SGEAGLFLLATVSVEEDSPFFRE*APPPPR
Trigger: CCGAGGAGGCGGTGGGGCCCACTCCCGGAAGAAGGG...AGAATCTTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp GTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTCTCGGAAAGCAAACCACCTCTaGCACCTGCTTTACAATGCT +
Preference number: 4 (lower is better)
Translates to: VPLKLLAPRCHSKLPGSRKANHL*HLLYNA
Trigger: AGCATTGTAAAGCAGGTGCCAGAGGTGGTTTGCTTT...CCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGGCATTGAGGAAGCGCTaGCGCCACGTGGTCAATGGA +
Preference number: 4 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKALRKR*RHVVNG
Trigger: TCCATTGACCACGTGGCGCCAGCGCTTCCTCAATGC...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATCAGAACTCCCTGGGTaGGACTCATCAGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQSELPG*DSSGGP
Trigger: TGGCCCTCCTGATGAGTCTCACCCAGGGAGTTCTGA...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCCGGCATATGTCCGTTaGTATAAAGATTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWPAYVR*YKDSGS
Trigger: GGATCCAGAATCTTTATATCAACGGACATATGCCGG...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCACTGGGCAGTCCTGCTaGTGGCTGTGTGATCCCGAT +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRTGQSC*WLCDPD
Trigger: ATCGGGATCACACAGCCATCAGCAGGACTGCCCAGT...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCTCTCGGAGAAATGGCATTGATTaGAACATGACTTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VPLKLLAPRCHSKLPGSRRNGID*NMTWSC
Trigger: GCAGGACCAAGTCATGTTGCAATCAATGCCATTTCT...CCGAGAGCCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGCCACAGGGGCAAAAGTaGAGTCATCGCTATTTCTTT +
Preference number: 4 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWPQGQK*SHRYFF
Trigger: AAAGAAATAGCGATGACTCCACTTTTGCCCCTGTGG...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAAGCGCCACGTGGTCAATaGAGTGTGCTCACCAACTGG +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQAPRGQ*SVLTNW
Trigger: CCAGTTGGTGAGCACACTCCATTGACCACGTGGCGC...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGGCATTGATTGCAACATaGCTTGGTCCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKALIAT*LGPAAS
Trigger: GGAGGCTGCAGGACCAAGTCATGTTGCAATCAATGC...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp ACCAAAATGAGCGGCCTCCATGTGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGGCTGTCCTGCTACTTaGAAAGGAGTCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: TKMSGLHVAWLLLKCGCPGCPAT*KGVHVG
Trigger: GCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCC...AGGACAGCCACACTTAAGAAGCAGCCAAGCCACATGGAGGCCGCTCATTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR TCA 90 bp AACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCGACAGGCTCAGCCAGTaGGCTCTGCTTCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: NLVSSCSGHFKTERMGTVDRLSQ*ALLHCV
Trigger: AACACAGTGAAGCAGAGCTCACTGGCTGAGCCTGTC...GACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp AACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCTCCAGGTCACCAAAATaGGCGGCCTCCATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: NLVSSCSGHFKTERMGTVSRSPK*AASMWL
Trigger: AAGCCACATGGAGGCCGCTCATTTTGGTGACCTGGA...GACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp TTCCATGAATTGAATGAAGTAAGGGAGGACAATAGTGTCGTGCAAGACTTGTTCACCGCCTCCTCGGGATaGCCAGGCAGCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: FHELNEVREDNSVVQDLFTASSG*PGSSSR
Trigger: GCGGCTGGAGCTGCCTGGGCATCCCGAGGAGGCGGT...GAACAAGTCTTGCACGACACTATTGTCCTCCCTTACTTCATTCAATTCATGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR CCA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGTCCTGTCCATCATATTaGCCCTTTTTGGCAGCAAGC +
Preference number: 4 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKSCPSY*PFLAAS
Trigger: GCTTGCTGCCAAAAAGGGCCAATATGATGGACAGGA...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAAGAAACAGTTGGGGAGTaGCCCACCTTCCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQETVGE*PTFPAD
Trigger: ATCTGCAGGGAAGGTGGGCCACTCCCCAACTGTTTC...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGGGAATGTACGGATATTaGAGCTTTAATGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWGMYGY*SFNGLH
Trigger: GTGAAGTCCATTAAAGCTTCAATATCCGTACATTCC...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGCATAAACAACTGTGCTaGGCCAGAATCCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKHKQLC*ARILQS
Trigger: AGATTGGAGGATTCTGGCTCAGCACAGTTGTTTATG...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCATGTTGGCAGAAGGAATGTACGGATATTaGAGGGCCGGGTGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: CFLSVAVLLLEKESMLAEGMYGY*RAGCGG
Trigger: GCCACCGCACCCGGCCCTTCAATATCCGTACATTCC...TTCTGCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR GCA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGGATTCTCGGATGAATTaGCCCAAGTCACTGACTCTT +
Preference number: 4 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKDSRMN*PKSLTL
Trigger: AAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATC...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGCCAAAACGAAACAGTTaGGATCCACCTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKPKRNS*DPPVHL
Trigger: AAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGG...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGGGTAAACAGTTCCACTaGTCAGCACTTCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKGKQFH*SALQSG
Trigger: ACCAGATTGAAGTGCTGACCAGTGGAACTGTTTACC...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TCTGCCCAGGTCACCAAAATGAGCGGCCTCCATGTGGCTTGGCTGCTTCTTAAGTGGCAGAAATGGCATTaGTTGCAACATGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: SAQVTKMSGLHVAWLLLKWQKWH*LQHDLV
Trigger: GACCAAGTCATGTTGCAATCAATGCCATTTCTGCCA...CTTAAGAAGCAGCCAAGCCACATGGAGGCCGCTCATTTTGGTGACCTGGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR TCA 90 bp TCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGTCCATGGAAACTTGGTaGGTTCCTGCTCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: SGHFKTERMGTVTFLGKQSMETW*VPALAI
Trigger: AATGGCCAGAGCAGGAACTCACCAAGTTTCCATGGA...CTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp TTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTGACTCTTCCAAATGTTCAGAACTCCCTGGGTaGGACTCATCAGGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FRLRFSDELPQVTDSSKCSELPG*DSSGGP
Trigger: TGGCCCTCCTGATGAGTCTCACCCAGGGAGTTCTGA...ACATTTGGAAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR GCA 90 bp CAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATGGAGTGTGCTCATCTTCTCTTGTTCTTTaGCTTTCACTTTCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: QSCALRKRWRHVVNGVCSSSLVL*LSLSAG
Trigger: TCCGGCGGAAAGTGAAAGGCAAAGAACAAGAGAAGA...TGAGCACACTCCATTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGTTCTGGATCCAGACTTaGCGCATCCACAATTATCGC +
Preference number: 4 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKFWIQT*RIHNYR
Trigger: GCGATAATTGTGGATGCGGCAAGTCTGGATCCAGAA...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp CAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATGGAGTGTGCTCAAGTTCTATGCTTATCTaGTTCCCAGAGGATGTGGTC +
Preference number: 4 (lower is better)
Translates to: QSCALRKRWRHVVNGVCSSSMLI*FPEDVV
Trigger: GACCACATCCTCTGGGAAGCAGATAAGCATAGAACT...TGAGCACACTCCATTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp CTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGATTGCAACATGACTTaGTCCTGCAGCCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LWPFQDGENGHCHIPGKADCNMT*SCSLQQ
Trigger: TTGCTGGAGGCTGCAGGACCAAGTCATGTTGCAATC...TGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCAAGCTAGCTCTTCCTaGGCCTCATCAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKQASSS*ASSVFP
Trigger: AGGAAATACTGATGAGGCCCAGGAAGAGCTAGCTTG...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCGCTTCCCAGAGGATGTaGTCCCTGTCTATTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRASQRM*SLSIPV
Trigger: TACTGGAATAGACAGGGACCACATCCTCTGGGAAGC...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp GATTGCAACATGACTTGGTCCTGCAGCCTCCAGCAAGGCATGATTTTTAGTGCTGGCTGTCCTGCTACTTaGAAAGGAGTCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: DCNMTWSCSLQQGMIFSAGCPAT*KGVHVG
Trigger: GCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCC...AGCACTAAAAATCATGCCTTGCTGGAGGCTGCAGGACCAAGTCATGTTGCAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR TCA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCCCCAGGTCACCAAAATaGGCGGCCTCCATGTGGCTT +
Preference number: 4 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPPRSPK*AASMWL
Trigger: AAGCCACATGGAGGCCGCTCATTTTGGTGACCTGGG...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp ATTAACTCTCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGAAACTTGACCCATaGCTTGTCAGTTTCCTTCCA +
Preference number: 4 (lower is better)
Translates to: INSHPVPLKLLAPRCHSKLKLDP*LVSFLP
Trigger: TGGAAGGAAACTGACAAGTCATGGGTCAAGTTTCAG...CTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGAGAGTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCCTCAATCATGTGCATTaGGGAAGCGCTGGCGCCACG +
Preference number: 4 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPLNHVH*GSAGAT
Trigger: CGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAG...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TCTGCCCAGGTCACCAAAATGAGCGGCCTCCATGTGGCTTGGCTGCTTCTTAAGCAAAATTTCACCAAATaGTCCATTCGCCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SAQVTKMSGLHVAWLLLKQNFTK*SIRRSS
Trigger: GGAACTTCGGCGAATGGAGCATTTGGTGAAATTTTG...CTTAAGAAGCAGCCAAGCCACATGGAGGCCGCTCATTTTGGTGACCTGGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR GCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCTCAGCCAGTGAGCTCTaGTTCACTGTGTTTAGACTG +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRSASEL*FTVFRL
Trigger: CAGTCTAAACACAGTGAAGCAGAGCTCACTGGCTGA...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TGGAAACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTCAGCCAGTGAGCTCTaGTTCACTGTGTTTAGACTG +
Preference number: 4 (lower is better)
Translates to: WKLGEFLLWPFQDGENGHSASEL*FTVFRL
Trigger: CAGTCTAAACACAGTGAAGCAGAGCTCACTGGCTGA...GTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp TGGAAACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACAACTTGGTGAGTTCCTaGTCTGGCCATTTCAAGACG +
Preference number: 4 (lower is better)
Translates to: WKLGEFLLWPFQDGENGHNLVSS*SGHFKT
Trigger: CGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTT...GTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAAAGAAAGACGACCAACTaGACACTTTCCAGCTCACAG +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQRKTTN*TLSSSQ
Trigger: CTGTGAGCTGGAAAGTGTGCAGTTGGTCGTCTTTCT...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCATGGATTGCAACATGACTTaGTCCTGCAGCCTCCAGCAA +
Preference number: 4 (lower is better)
Translates to: WLGCFLSVAVLLLEKESMDCNMT*SCSLQQ
Trigger: TTGCTGGAGGCTGCAGGACCAAGTCATGTTGCAATC...CATGGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR CCA 90 bp GGGAGGACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGCTTGATGGCCTCCATGTGGCTTaGCTGCTTCTTAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GRTIVSCKTCSRVLERLDGLHVA*LLLKCG
Trigger: GCCACACTTAAGAAGCAGCCAAGCCACATGGAGGCC...ATCAAGCCTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR CCA 90 bp CAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATGGAGTGTGCTCAGTAGAGGAAGATTCTTaGGTTTCCATGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: QSCALRKRWRHVVNGVCSVEEDS*VSMETW
Trigger: CCAAGTTTCCATGGAAACCCAAGAATCTTCCTCTAC...TGAGCACACTCCATTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCATGTTGGCAGAAGCATTGATTGCAACATaGCTTGGTCCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CFLSVAVLLLEKESMLAEALIAT*LGPAAS
Trigger: GGAGGCTGCAGGACCAAGTCATGTTGCAATCAATGC...TTCTGCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR TCA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCGACAGGCTCAGCCAGTaGGCTCTGCTTCACTGTGTT +
Preference number: 4 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPDRLSQ*ALLHCV
Trigger: AACACAGTGAAGCAGAGCTCACTGGCTGAGCCTGTC...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp CTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCACATAAACAACTGTGCTaGGCCAGAATCCTCCAATCT +
Preference number: 4 (lower is better)
Translates to: LWPFQDGENGHCHIPGKAHKQLC*ARILQS
Trigger: AGATTGGAGGATTCTGGCTCAGCACAGTTGTTTATG...TGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATTTTTGGCAGCAAGCTaGGACTGGAAGTTATCTGCT +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQFLAAS*DWKLSA
Trigger: AGCAGATAACTTCCAGTCTCAGCTTGCTGCCAAAAA...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAAATTGCCCCAAGTCACTaGCTCTTCCAAATGTCATCT +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQIAPSH*LFQMSS
Trigger: AGATGACATTTGGAAGAGTCAGTGACTTGGGGCAAT...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp CAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATGGAGTGTGCTCAGAACATGGATCCTTTTaGTTTCCTTACATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: QSCALRKRWRHVVNGVCSEHGSF*FPYIRF
Trigger: GAACCTGATGTAAGGAAATCAAAAGGATCCATGTTC...TGAGCACACTCCATTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TGGAAACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACAGGACAATAGTGTCGTaGAAGACTTGTTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: WKLGEFLLWPFQDGENGHRTIVS*KTCSRV
Trigger: GACCCTTGAACAAGTCTTGCACGACACTATTGTCCT...GTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp CAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATGGAGTGTGCTCATGTGTGAACATCATGTaGATCAATTATGCCTACAGG +
Preference number: 4 (lower is better)
Translates to: QSCALRKRWRHVVNGVCSCVNIM*INYAYR
Trigger: CCTGTAGGCATAATTGATGCACATGATGTTCACACA...TGAGCACACTCCATTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGTTACCACTACGAGTGTaGATCAAGTATCAGTTCTAT +
Preference number: 4 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKLPLRV*IKYQFY
Trigger: ATAGAACTGATACTTGATGCACACTCGTAGTGGTAA...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTGCTGCCACTCAAAGCTaGCTGGCTCTCGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASAATQS*LALGGA
Trigger: AGCCCCACCGAGAGCCAGGCAGCTTTGAGTGGCAGC...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp AGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAAGATTCTGCATTGATTGCAACATaGCTTGGTCCTGCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SGEAGLFLLATVSVEEDSALIAT*LGPAAS
Trigger: GGAGGCTGCAGGACCAAGTCATGTTGCAATCAATGC...AGAATCTTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp TGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCATGTCTTCTCTTGTTCTTTaGCTTTCACTTTCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: WLGCFLSVAVLLLEKESMSSLVL*LSLSAG
Trigger: TCCGGCGGAAAGTGAAAGGCAAAGAACAAGAGAAGA...CATGGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR GCA 90 bp TCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGCAAAATTTCACCAAATaGTCCATTCGCCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SGHFKTERMGTVTFLGKQQNFTK*SIRRSS
Trigger: GGAACTTCGGCGAATGGAGCATTTGGTGAAATTTTG...CTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCATTCTTGGGTTTCCATaGAAACTTGGTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRILGFP*KLGEFL
Trigger: CAGGAACTCACCAAGTTTCCATGGAAACCCAAGAAT...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TTCCTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTGCAAGCTAGCTCTTCCTaGGCCTCATCAGTATTTCCT +
Preference number: 4 (lower is better)
Translates to: FLTSGSGSDSRMNCPKSLQASSS*ASSVFP
Trigger: AGGAAATACTGATGAGGCCCAGGAAGAGCTAGCTTG...CAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR CCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCCAGGTAACTGCATTATaGTGGAAGTCTAGGATTGTC +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRQVTAL*WKSRIV
Trigger: GACAATCCTAGACTTCCACCATAATGCAGTTACCTG...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGGGAATGTACGGATATTaGAGCTTTAATGGACTTCAC +
Preference number: 4 (lower is better)
Translates to: SGHFKTERMGTVTFLGKQGMYGY*SFNGLH
Trigger: GTGAAGTCCATTAAAGCTTCAATATCCGTACATTCC...CTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp GTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGTGGTCCCTGGCAGAAATGGCATTaGTTGCAACATGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: VCIKYQFYAYLLPRGCGPWQKWH*LQHDLV
Trigger: GACCAAGTCATGTTGCAATCAATGCCATTTCTGCCA...GGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp CTTGGCTGCTTCTTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCATGTTGTGGCAGAAATGGCATTaGTTGCAACATGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: LGCFLSVAVLLLEKESMLWQKWH*LQHDLV
Trigger: GACCAAGTCATGTTGCAATCAATGCCATTTCTGCCA...CAACATGGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAAGAAGCAGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR TCA 90 bp TTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGCAAGTGATTGGCAGAAATGGCATTaGTTGCAACATGACTTGGTC +
Preference number: 4 (lower is better)
Translates to: FQDGENGHCHIPGKAASDWQKWH*LQHDLV
Trigger: GACCAAGTCATGTTGCAATCAATGCCATTTCTGCCA...ATCACTTGCTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp CTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCACAGGTCAATTCCTTCTaGATGAGTCATAAACAACTG +
Preference number: 4 (lower is better)
Translates to: LWPFQDGENGHCHIPGKAQVNSF*MSHKQL
Trigger: CAGTTGTTTATGACTCATTCAGAAGGAATTGACCTG...TGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCTCCATGGAAACTTGGTaGGTTCCTGCTCTGGCCATT +
Preference number: 4 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPSMETW*VPALAI
Trigger: AATGGCCAGAGCAGGAACTCACCAAGTTTCCATGGA...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp AATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCTTTTTGGCAGCTTTTTGGCAGCAAGCTaGGACTGGAAGTTATCTGCT +
Preference number: 4 (lower is better)
Translates to: NHGIILCLLSIILALFGSFLAAS*DWKLSA
Trigger: AGCAGATAACTTCCAGTCTCAGCTTGCTGCCAAAAA...GCTGCCAAAAAGGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR TCA 90 bp CTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTGACTCCGGCATATGTCCGTTaGTATAAAGATTCTGGATCC +
Preference number: 4 (lower is better)
Translates to: LTSGSGSDSRMNCPKSLTPAYVR*YKDSGS
Trigger: GGATCCAGAATCTTTATATCAACGGACATATGCCGG...AGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR TCA 90 bp GTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGTGGTCCCTGCTTCTTCTGTCGATaGAACAGTGTGCCTCTATAC +
Preference number: 4 (lower is better)
Translates to: VCIKYQFYAYLLPRGCGPCFFCR*NSVPLY
Trigger: GTATAGAGGCACACTGTTTCATCGACAGAAGAAGCA...GGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GGGAGGACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGCTTGATAGTCCAGACAAGATCTaGCCAGGTCACCAAAATGAG +
Preference number: 4 (lower is better)
Translates to: GRTIVSCKTCSRVLERLDSPDKI*PGHQNE
Trigger: CTCATTTTGGTGACCTGGGCAGATCTTGTCTGGACT...ATCAAGCCTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTCCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR GCA 90 bp AAACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTAAAGACTATGGACTGTaGCAAAACGAAACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: KLGEFLLWPFQDGENGHCKDYGL*QNETVG
Trigger: CCCAACTGTTTCGTTTTGGCACAGTCCATAGTCTTT...ACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp CTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTGACTGATTCTCGGATGAATTaGCCCAAGTCACTGACTCTT +
Preference number: 4 (lower is better)
Translates to: LTSGSGSDSRMNCPKSLTDSRMN*PKSLTL
Trigger: AAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATC...AGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR GCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCAGAGGCAGCAAGAGTTaGCCAAAACCACATTTTATT +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRRGSKS*PKPHFI
Trigger: AATAAAATGTGGTTTTGGGCAACTCTTGCTGCCTCT...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTTATGTGGCACGTGACTGTACATACCAGGCCAGACTCAAGGCCTCTGCTCTTACTTCAATTTCCACTGTaGTATTCTGCTTGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: VMWHVTVHTRPDSRPLLLLQFPL*YSAWFS
Trigger: GGAAAACCAAGCAGAATAGCACAGTGGAAATTGAAG...TAAGAGCAGAGGCCTTGAGTCTGGCCTGGTATGTACAGTCACGTGCCACATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CCA 90 bp TCACTGTGTTTAGACTGTGTGCTCTTATTCGCGACCAAGTTGTTGAATGAAAACGGCCTCCATGTGGCTTaGCTGCTTCTTAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SLCLDCVLLFATKLLNENGLHVA*LLLKCG
Trigger: GCCACACTTAAGAAGCAGCCAAGCCACATGGAGGCC...GTTTTCATTCAACAACTTGGTCGCGAATAAGAGCACACAGTCTAAACACAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp GTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGTGGTCCCTTCATGCTTTTTAGATaGAGAGACAGGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: VCIKYQFYAYLLPRGCGPFMLFR*RDRLSQ
Trigger: CTGGCTGAGCCTGTCTCTCCATCTAAAAAGCATGAA...GGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCTTTTTGGAAACAGTTGGGGAGTaGCCCACCTTCCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: YKIMASFCASCPSYWPFLETVGE*PTFPAD
Trigger: ATCTGCAGGGAAGGTGGGCCACTCCCCAACTGTTTC...CAAAAAGGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCGGAAAGTTAAGTAACTaGAGTGCAGAATTCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRGKLSN*SAEFQR
Trigger: CCTTTGGAATTCTGCACTCCAGTTACTTAACTTTCC...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CAA 72 bp AATCATGGCATCATTCTGTGCCTCCTGTCCATCATATaGGCCCTTTTTGGCAGCAAGCTGAGACTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: NHGIILCLLSII*ALFGSKLRLEV
Trigger: AACTTCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR TCA 90 bp TCACTGTGTTTAGACTGTGTGCTCTTATTCGCGACCAAGTTGTTGAATGAAAACGGCTGTCCTGCTACTTaGAAAGGAGTCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: SLCLDCVLLFATKLLNENGCPAT*KGVHVG
Trigger: GCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCC...GTTTTCATTCAACAACTTGGTCGCGAATAAGAGCACACAGTCTAAACACAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAACACAAATCCTTGCTATaGTGTCATTTCTCATTGCTT +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQHKSLL*CHFSLL
Trigger: AAGCAATGAGAAATGACATCATAGCAAGGATTTGTG...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTGACTCTTCCAAATGTATTGCCCCAAGTCACTaGCTCTTCCAAATGTCATCT +
Preference number: 4 (lower is better)
Translates to: FRLRFSDELPQVTDSSKCIAPSH*LFQMSS
Trigger: AGATGACATTTGGAAGAGTCAGTGACTTGGGGCAAT...ACATTTGGAAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR TCA 90 bp GAAGTAAGGGAGGACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGCATTGATTGCAACATaGCTTGGTCCTGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: EVREDNSVVQDLFKGLRKALIAT*LGPAAF
Trigger: AAAGGCTGCAGGACCAAGTCATGTTGCAATCAATGC...CTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTCCTCCCTTACTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR GCA 90 bp GTAAGGGAGGACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGCTTCTTCTCTTGTTCTTTaGCTTTCACTTTCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: VREDNSVVQDLFKGLRKASSLVL*LSLSAG
Trigger: TCCGGCGGAAAGTGAAAGGCAAAGAACAAGAGAAGA...AGCCTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTCCTCCCTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR GCA 90 bp GGGAGGACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGCTTGATAGGACAATAGTGTCGTaGAAGACTTGTTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: GRTIVSCKTCSRVLERLDRTIVS*KTCSRV
Trigger: GACCCTTGAACAAGTCTTGCACGACACTATTGTCCT...ATCAAGCCTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTCCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR GCA 90 bp AAACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTAGAAACTCACTAAAGTaGTCTTGCTCCATTGCACTA +
Preference number: 4 (lower is better)
Translates to: KLGEFLLWPFQDGENGHCRNSLK*SCSIAL
Trigger: TAGTGCAATGGAGCAAGAGCACTTTAGTGAGTTTCT...ACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAACATGTGCATCAATTATaGCTACAGGTAACTGCATTA +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQHVHQL*LQVTAL
Trigger: TAATGCAGTTACCTGTAGGCATAATTGATGCACATG...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAGGATGTGGTCCCCAGAAGAGCCATAAATaGCCTGAAAGCAGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: VCIKYQFYAYLLPRGCGPQKSHK*PESRKL
Trigger: CAACTTTCTGCTTTCAGGGCATTTATGGCTCTTCTG...GGGACCACATCCTCTGGGAAGCAGATAAGCATAGAACTGATACTTGATGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATAGGCCTCCATGTGGCTTaGCTGCTTCTTAAGTGTGGC +
Preference number: 4 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIGLHVA*LLLKCG
Trigger: GCCACACTTAAGAAGCAGCCAAGCCACATGGAGGCC...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TCTTTTAGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAATCAAGACGGAGAGAATaGGCACTGTCACATTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFSGEAGLFLLATVSVEESRRRE*ALSHSW
Trigger: CCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGA...TTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACTAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp TTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGCAAGTGATGTAGAGGAAGATTCTTaGGTTTCCATGGAAACTTGG +
Preference number: 4 (lower is better)
Translates to: FQDGENGHCHIPGKAASDVEEDS*VSMETW
Trigger: CCAAGTTTCCATGGAAACCCAAGAATCTTCCTCTAC...ATCACTTGCTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCTTCTGTAATTGGTATTaGTTTAGCAGCATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRFCNWY*FSSIWR
Trigger: TCTCCAGATGCTGCTAAACCAATACCAATTACAGAA...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TGGAAACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTTCTGTAATTGGTATTaGTTTAGCAGCATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: WKLGEFLLWPFQDGENGHFCNWY*FSSIWR
Trigger: TCTCCAGATGCTGCTAAACCAATACCAATTACAGAA...GTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTTTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAACATTGCTTCTGTAATTaGTATTGGTTTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQHCFCN*YWFSSI
Trigger: GATGCTGCTAAACCAATACCAATTACAGAAGCAATG...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TGTGCCAAAACGAAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTCCAAAACGAAACAGTTaGGATCCACCTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: CAKTKQLGSTCPSSPQILPKRNS*DPPVHL
Trigger: AAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGG...AAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCCTGACTCACCTGCTTTaGAAGGACAAAGCAAACCAC +
Preference number: 4 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPLTHLL*KDKANH
Trigger: GTGGTTTGCTTTGTCCTTCCAAAGCAGGTGAGTCAG...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp ATTATTGCACTACCAGCTTTGATCCATTATAATCGTACAGGACCATCGTACACGGGGTTACCTTCTCCATaGTTGTCCAGGCCTGACGTA +
Preference number: 4 (lower is better)
Translates to: IIALPALIHYNRTGPSYTGLPSP*LSRPDV
Trigger: TACGTCAGGCCTGGACAACCATGGAGAAGGTAACCC...CGTGTACGATGGTCCTGTACGATTATAATGGATCAAAGCTGGTAGTGCAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR CAA 72 bp GCACTAAAGACTATGGACTGTGCCAAAACGAAACAGTaGGGATCCACCTGTCCATCTTCTCCACAAATCCTT +
Preference number: 4 (lower is better)
Translates to: ALKTMDCAKTKQ*GSTCPSSPQIL
Trigger: AAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACAGTCCATAGTCTTTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR CAA 72 bp CCTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATaGCCCCAAGTCACTGACTCTTCCAAATGTCATCTT +
Preference number: 4 (lower is better)
Translates to: PYIRFRLRFSDE*PQVTDSSKCHL
Trigger: AAGATGACATTTGGAAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR TCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATAGGCTGTCCTGCTACTTaGAAAGGAGTCCATGTTGGC +
Preference number: 4 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIGCPAT*KGVHVG
Trigger: GCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCC...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTAAGGGAGGACAATAGTGTCGTGCAAGACTTGTTCAAGGGTCTTAGAAAGGCTAGAAATGGCATTGATTaGAACATGACTTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VREDNSVVQDLFKGLRKARNGID*NMTWSC
Trigger: GCAGGACCAAGTCATGTTGCAATCAATGCCATTTCT...AGCCTTTCTAAGACCCTTGAACAAGTCTTGCACGACACTATTGTCCTCCCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR GCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCTTCTCCACAAATCCTTaGTATGATGTCATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRFSTNP*YDVISH
Trigger: ATGAGAAATGACATCATAGCAAGGATTTGTGGAGAA...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TCCGTTGATATAAAGATTCTGGATCCAGACTTGCCGCATCCACAATTATCGCTTTTCTGGATCCAGACTTaGCGCATCCACAATTATCGC +
Preference number: 4 (lower is better)
Translates to: SVDIKILDPDLPHPQLSLFWIQT*RIHNYR
Trigger: GCGATAATTGTGGATGCGGCAAGTCTGGATCCAGAA...AAGCGATAATTGTGGATGCGGCAAGTCTGGATCCAGAATCTTTATATCAACGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR GCA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCAAAACCTTGGGTTTATaGCATACACTTCAAACACAA +
Preference number: 4 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRKTLGL*HTLQTQ
Trigger: TTGTGTTTGAAGTGTATGGCATAAACCCAAGGTTTT...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp AAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTGCTATGATGTCAGGTAAACAGTTCCACTaGTCAGCACTTCAATCTGGT +
Preference number: 4 (lower is better)
Translates to: KQLGSTCPSSPQILAMMSGKQFH*SALQSG
Trigger: ACCAGATTGAAGTGCTGACCAGTGGAACTGTTTACC...TGACATCATAGCAAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp TTGTCATATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCAGAGGATGTGTGGCTTaGAGGGAGAAGTACTTGTCA +
Preference number: 4 (lower is better)
Translates to: LSYKIMASFCASCPSYWPRGCVA*REKYLS
Trigger: TGACAAGTACTTCTCCCTCCAAGCCACACATCCTCT...GGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATATGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR TCA 90 bp TTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGCAAGTGATCACAAATCCTTGCTATaGTGTCATTTCTCATTGCTT +
Preference number: 4 (lower is better)
Translates to: FQDGENGHCHIPGKAASDHKSLL*CHFSLL
Trigger: AAGCAATGAGAAATGACATCATAGCAAGGATTTGTG...ATCACTTGCTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp TTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTGACTCTTCCAAATGTGAACATGGATCCTTTTaGTTTCCTTACATCAGGTTC +
Preference number: 4 (lower is better)
Translates to: FRLRFSDELPQVTDSSKCEHGSF*FPYIRF
Trigger: GAACCTGATGTAAGGAAATCAAAAGGATCCATGTTC...ACATTTGGAAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR TCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGACTGCTGATGGCTGTGTaGTCCCGATGCAGAAGCCAA +
Preference number: 4 (lower is better)
Translates to: FGKINIFQQKSHKCPESRLLMAV*SRCRSQ
Trigger: TTGGCTTCTGCATCGGGATCACACAGCCATCAGCAG...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTCCTGCTACTTGAAAAGGAGTCCATGTTGGCAGAAATGGCATTGATTGCAACAAGAAATGGCATTGATTaGAACATGACTTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLLLEKESMLAEMALIATRNGID*NMTWSC
Trigger: GCAGGACCAAGTCATGTTGCAATCAATGCCATTTCT...TGTTGCAATCAATGCCATTTCTGCCAACATGGACTCCTTTTCAAGTAGCAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR GCA 90 bp AGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAAGATTCTAGAAATGGCATTGATTaGAACATGACTTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGEAGLFLLATVSVEEDSRNGID*NMTWSC
Trigger: GCAGGACCAAGTCATGTTGCAATCAATGCCATTTCT...AGAATCTTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp TTTGATACGTTTGAAGTTCTGGGTTACCTTCTCCATGGTTGTCCAGGCCTGACGTTCTGTAATTGGTATTaGTTTAGCAGCATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FDTFEVLGYLLHGCPGLTFCNWY*FSSIWR
Trigger: TCTCCAGATGCTGCTAAACCAATACCAATTACAGAA...CGTCAGGCCTGGACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR CAA 72 bp ATTTCTACTGGCTACTGTAAGTGTAGAGGAAGATTCTaGGGTTTCCATGGAAACTTGGTGAGTTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ISTGYCKCRGRF*GFHGNLVSSCS
Trigger: AGAGCAGGAACTCACCAAGTTTCCATGGAAACCCAAGAATCTTCCTCTACACTTACAGTAGCCAGTAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
3UTR CAA 72 bp TTTCACCAAATGCTCCATTCGCCGAAGTTCCATGAATaGAATGAAGTAAGGGAGGACAATAGTGTCGTGCAA +
Preference number: 4 (lower is better)
Translates to: FHQMLHSPKFHE*NEVREDNSVVQ
Trigger: TTGCACGACACTATTGTCCTCCCTTACTTCATTCAATTCATGGAACTTCGGCGAATGGAGCATTTGGTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR TCA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCGACCAAGTTGTTGAATaGAAACTTTCAGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPDQVVE*KLSASN
Trigger: GTTAGAGGCTGAAAGTTTTCATTCAACAACTTGGTC...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp AAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTGCTATGATGTCAGACCAAGTTGTTGAATaGAAACTTTCAGCCTCTAAC +
Preference number: 4 (lower is better)
Translates to: KQLGSTCPSSPQILAMMSDQVVE*KLSASN
Trigger: GTTAGAGGCTGAAAGTTTTCATTCAACAACTTGGTC...TGACATCATAGCAAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp TTGTCATATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCAAAGACTATGGACTGTaGCAAAACGAAACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LSYKIMASFCASCPSYWPKDYGL*QNETVG
Trigger: CCCAACTGTTTCGTTTTGGCACAGTCCATAGTCTTT...GGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR GCA 90 bp TCACTGTGTTTAGACTGTGTGCTCTTATTCGCGACCAAGTTGTTGAATGAAAACGTGCTCTTGCTCCATTaGACTAAAGACTATGGACTG +
Preference number: 4 (lower is better)
Translates to: SLCLDCVLLFATKLLNENVLLLH*TKDYGL
Trigger: CAGTCCATAGTCTTTAGTGCAATGGAGCAAGAGCAC...GTTTTCATTCAACAACTTGGTCGCGAATAAGAGCACACAGTCTAAACACAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCAGAAACTCACTAAAGTaGTCTTGCTCCATTGCACTA +
Preference number: 4 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPRNSLK*SCSIAL
Trigger: TAGTGCAATGGAGCAAGAGCACTTTAGTGAGTTTCT...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCTTTTTGGTGGCCCACCTTCCCTaGAGATATTGGATTCAATTT +
Preference number: 4 (lower is better)
Translates to: YKIMASFCASCPSYWPFLVAHLP*RYWIQF
Trigger: AAATTGAATCCAATATCTGCAGGGAAGGTGGGCCAC...CAAAAAGGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR GCA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTACCACCTCTGGCACCTaGTTTACAATGCTGATTAGG +
Preference number: 4 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASTTSGT*FTMLIR
Trigger: CCTAATCAGCATTGTAAAGCAGGTGCCAGAGGTGGT...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TCACTGTGTTTAGACTGTGTGCTCTTATTCGCGACCAAGTTGTTGAATGAAAACTTCATGCTTTTTAGATaGAGAGACAGGCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLCLDCVLLFATKLLNENFMLFR*RDRLSQ
Trigger: CTGGCTGAGCCTGTCTCTCCATCTAAAAAGCATGAA...GTTTTCATTCAACAACTTGGTCGCGAATAAGAGCACACAGTCTAAACACAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp TCTTTTAGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAAATTCTTGGGTTTCCATaGAAACTTGGTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: SFSGEAGLFLLATVSVEEILGFP*KLGEFL
Trigger: CAGGAACTCACCAAGTTTCCATGGAAACCCAAGAAT...TTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp ACTTCTTGTAGTTTGATACGTTTGAAGTTCTGGGTTACCTTCTCCATGGTTGTCCCAAAACGAAACAGTTaGGATCCACCTGTCCATCTT +
Preference number: 4 (lower is better)
Translates to: TSCSLIRLKFWVTFSMVVPKRNS*DPPVHL
Trigger: AAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGG...GACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTATCAAACTACAAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CCA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTCATATTGGCCCTTTTTaGCAGCAAGCTGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASHIGPF*QQAETG
Trigger: TCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAATATG...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATAAAAAGACCTTCTCCATaGTTGTCCAGGCCTGACGTA +
Preference number: 4 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIKRPSP*LSRPDV
Trigger: TACGTCAGGCCTGGACAACCATGGAGAAGGTCTTTT...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp ACCCTTCTGTTAGCAGGGGAGAGAATGGTTTTAAGTATAGTGCATCTCAGGAGGTCTCCTCGAACCGAATaGATGAGATCATTCAAATAT +
Preference number: 4 (lower is better)
Translates to: TLLLAGERMVLSIVHLRRSPRTE*MRSFKY
Trigger: ATATTTGAATGATCTCATCCATTCGGTTCGAGGAGA...CCTCCTGAGATGCACTATACTTAAAACCATTCTCTCCCCTGCTAACAGAAGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CAA 72 bp AAACAGTTGGGGAGTGGCCCACCTTCCCTGCAGATATaGGATTCAATTTCTAATCGTACAACATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: KQLGSGPPSLQI*DSISNRTTSSN
Trigger: ATTTGATGATGTTGTACGATTAGAAATTGAATCCAATATCTGCAGGGAAGGTGGGCCACTCCCCAACTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR GCA 90 bp ACCCTTCTGTTAGCAGGGGAGAGAATGGTTTTAAGTATAGTGCATCTCAGGAGGGTCGATGAAACAGTGTaGCTCTATACAATCAAATAT +
Preference number: 4 (lower is better)
Translates to: TLLLAGERMVLSIVHLRRVDETV*LYTIKY
Trigger: ATATTTGATTGTATAGAGGCACACTGTTTCATCGAC...CCTCCTGAGATGCACTATACTTAAAACCATTCTCTCCCCTGCTAACAGAAGGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TCAATTTCTAATCGTACAACATCATCAAATCCAAGAGGATGTGTGGCTTGGAGGTCCACTGTGCTATTCTaGTTGGTTTTCCCACCTTAT +
Preference number: 4 (lower is better)
Translates to: SISNRTTSSNPRGCVAWRSTVLF*LVFPPY
Trigger: ATAAGGTGGGAAAACCAAGCAGAATAGCACAGTGGA...CCTCCAAGCCACACATCCTCTTGGATTTGATGATGTTGTACGATTAGAAATTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR GCA 90 bp ATTATTGCACTACCAGCTTTGATCCATTATAATCGTACAGGACCATCGTACACGATCACTTTGCTGGACTaGTTCAATTTCCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: IIALPALIHYNRTGPSYTITLLD*FNFHCA
Trigger: AGCACAGTGGAAATTGAAGCAGTCCAGCAAAGTGAT...CGTGTACGATGGTCCTGTACGATTATAATGGATCAAAGCTGGTAGTGCAATAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGATCAAGACGGAGAGAATaGGCACTGTCACATTCCTGG +
Preference number: 4 (lower is better)
Translates to: FGKINIFQQKSHKCPESRSRRRE*ALSHSW
Trigger: CCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGA...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp CCCTGCAGATATTGGATTCAATTTCTAATCGTACAACATCATCAAATCCAAGAGCATATTGGCCCTTTTTaGCAGCAAGCTGAGACTGGA +
Preference number: 4 (lower is better)
Translates to: PCRYWIQFLIVQHHQIQEHIGPF*QQAETG
Trigger: TCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAATATG...CTCTTGGATTTGATGATGTTGTACGATTAGAAATTGAATCCAATATCTGCAGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CCA 90 bp CCCTGCAGATATTGGATTCAATTTCTAATCGTACAACATCATCAAATCCAAGAGATCCAAGAGGATGTGTaGCTTGGAGGGAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: PCRYWIQFLIVQHHQIQEIQEDV*LGGRST
Trigger: AGTACTTCTCCCTCCAAGCCACACATCCTCTTGGAT...CTCTTGGATTTGATGATGTTGTACGATTAGAAATTGAATCCAATATCTGCAGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR TCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATATTTCATTGGCTGTGTTaGAGAATCCAACCAAGGGAA +
Preference number: 4 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIFHWLC*RIQPRE
Trigger: TTCCCTTGGTTGGATTCTTCAACACAGCCAATGAAA...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTCAGAAGTGCAGTGAGTaGGTCTCTTACTATCCTAAA +
Preference number: 4 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASQKCSE*VSYYPK
Trigger: TTTAGGATAGTAAGAGACTCACTCACTGCACTTCTG...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp GTCATTTCTCATTGCTTCTGTAATTGGTATTGGTTTAGCAGCATCTGGAGATATTCTTCTCTTGTTCTTTaGCTTTCACTTTCCGCCGGA +
Preference number: 4 (lower is better)
Translates to: VISHCFCNWYWFSSIWRYSSLVL*LSLSAG
Trigger: TCCGGCGGAAAGTGAAAGGCAAAGAACAAGAGAAGA...ATATCTCCAGATGCTGCTAAACCAATACCAATTACAGAAGCAATGAGAAATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATACAAAATTTCACCAAATaGTCCATTCGCCGAAGTTCC +
Preference number: 4 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIQNFTK*SIRRSS
Trigger: GGAACTTCGGCGAATGGAGCATTTGGTGAAATTTTG...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp AGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAAGATTCTTTCTCCACAAATCCTTaGTATGATGTCATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: SGEAGLFLLATVSVEEDSFSTNP*YDVISH
Trigger: ATGAGAAATGACATCATAGCAAGGATTTGTGGAGAA...AGAATCTTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATAAAAGACTATGGACTGTaGCAAAACGAAACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIKDYGL*QNETVG
Trigger: CCCAACTGTTTCGTTTTGGCACAGTCCATAGTCTTT...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTTGTTATTCCAAAACATaGAGAGGCAGCAAGAGTTGC +
Preference number: 4 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASCYSKT*RGSKSC
Trigger: GCAACTCTTGCTGCCTCTGCATGTTTTGGAATAACA...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TCAATTTCTAATCGTACAACATCATCAAATCCAAGAGGATGTGTGGCTTGGAGGTGTATCTTGCTCCATTaGACTAAAGACTATGGACTG +
Preference number: 4 (lower is better)
Translates to: SISNRTTSSNPRGCVAWRCILLH*TKDYGL
Trigger: CAGTCCATAGTCTTTAGTGCAATGGAGCAAGATACA...CCTCCAAGCCACACATCCTCTTGGATTTGATGATGTTGTACGATTAGAAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CCA 90 bp TCTTTTAGTGGAGAAGCGGGACTATTTCTACTGGCTACTGTAAGTGTAGAGGAACATTGCTTCTGTAATTaGTATTGGTTTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SFSGEAGLFLLATVSVEEHCFCN*YWFSSI
Trigger: GATGCTGCTAAACCAATACCAATTACAGAAGCAATG...TTCCTCTACACTTACAGTAGCCAGTAGAAATAGTCCCGCTTCTCCACTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAAGAGGATGTGTGGCTTaGAGGGAGAAGTACTTGTCA +
Preference number: 4 (lower is better)
Translates to: FGKINIFQQKSHKCPESRRGCVA*REKYLS
Trigger: TGACAAGTACTTCTCCCTCCAAGCCACACATCCTCT...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAATCCAAGAGGATGTGTaGCTTGGAGGGAGAAGTACT +
Preference number: 4 (lower is better)
Translates to: FGKINIFQQKSHKCPESRIQEDV*LGGRST
Trigger: AGTACTTCTCCCTCCAAGCCACACATCCTCTTGGAT...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCCTTCCCTGCAGATATTaGATTCAATTTCTAATCGTA +
Preference number: 4 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPLPCRY*IQFLIV
Trigger: TACGATTAGAAATTGAATCCAATATCTGCAGGGAAG...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGATCGCGACCAAGTTGTTaGATGAAAACTTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: FGKINIFQQKSHKCPESRSRPSC*MKTFSL
Trigger: GAGGCTGAAAGTTTTCATTCAACAACTTGGTCGCGA...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATACAGGTCAATTCCTTCTaGATGAGTCATAAACAACTG +
Preference number: 4 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIQVNSF*MSHKQL
Trigger: CAGTTGTTTATGACTCATTCAGAAGGAATTGACCTG...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR TCA 90 bp TCAATTTCTAATCGTACAACATCATCAAATCCAAGAGGATGTGTGGCTTGGAGGCACAAATCCTTGCTATaGTGTCATTTCTCATTGCTT +
Preference number: 4 (lower is better)
Translates to: SISNRTTSSNPRGCVAWRHKSLL*CHFSLL
Trigger: AAGCAATGAGAAATGACATCATAGCAAGGATTTGTG...CCTCCAAGCCACACATCCTCTTGGATTTGATGATGTTGTACGATTAGAAATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR GCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAGTGGCCCACCTTCCCTaGAGATATTGGATTCAATTT +
Preference number: 4 (lower is better)
Translates to: FGKINIFQQKSHKCPESRVAHLP*RYWIQF
Trigger: AAATTGAATCCAATATCTGCAGGGAAGGTGGGCCAC...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp TATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCTTTTTGCTGTGCTATTCTGCTTaGTTTTCCCACCTTATATTT +
Preference number: 4 (lower is better)
Translates to: YKIMASFCASCPSYWPFLLCYSA*FSHLIF
Trigger: AAATATAAGGTGGGAAAACCAAGCAGAATAGCACAG...CAAAAAGGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR CAA 72 bp GTGGTACATAGTACCAAAAACTTACACAAAGCCTTTTaGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATA +
Preference number: 4 (lower is better)
Translates to: VVHSTKNLHKAF*LLLSMKQCASI
Trigger: TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTTGGTACTATGTACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000225737.11
3UTR CAA 72 bp AGTTCTACCAATAAAACTTCTTGTAGTTTGATACGTTaGAAGTTCTGGGTTACCTTCTCCATGGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SSTNKTSCSLIR*KFWVTFSMVVQ
Trigger: CTGGACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTATCAAACTACAAGAAGTTTTATTGGTAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR CAA 72 bp CTGTGTTTAGACTGTGTGCTCTTATTCGCGACCAAGTaGTTGAATGAAAACTTTCAGCCTCTAACCAAAATT +
Preference number: 4 (lower is better)
Translates to: LCLDCVLLFATK*LNENFQPLTKI
Trigger: AATTTTGGTTAGAGGCTGAAAGTTTTCATTCAACAACTTGGTCGCGAATAAGAGCACACAGTCTAAACACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR TCA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTA +
Preference number: 4 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASYLQKW*LRRNSL
Trigger: TAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATA...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR GCA 90 bp TATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCTTTTTGTTCTCCACAAATCCTTaGTATGATGTCATTTCTCAT +
Preference number: 4 (lower is better)
Translates to: YKIMASFCASCPSYWPFLFSTNP*YDVISH
Trigger: ATGAGAAATGACATCATAGCAAGGATTTGTGGAGAA...CAAAAAGGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CCA 90 bp ACTTCTTGTAGTTTGATACGTTTGAAGTTCTGGGTTACCTTCTCCATGGTTGTCCTTCCCTGCAGATATTaGATTCAATTTCTAATCGTA +
Preference number: 4 (lower is better)
Translates to: TSCSLIRLKFWVTFSMVVLPCRY*IQFLIV
Trigger: TACGATTAGAAATTGAATCCAATATCTGCAGGGAAG...GACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTATCAAACTACAAGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CCA 90 bp AAGTACTTGTCATATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATATACGTTTGAAGTTCTaGGTTACCTTCTCCATGGTT +
Preference number: 4 (lower is better)
Translates to: KYLSYKIMASFCASCPSYIRLKF*VTFSMV
Trigger: AACCATGGAGAAGGTAACCCAGAACTTCAAACGTAT...ATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATATGACAAGTACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
3UTR CAA 72 bp CATATGTCCGTTGATATAAAGATTCTGGATCCAGACTaGCCGCATCCACAATTATCGCTTCATCAAAATTTT +
Preference number: 4 (lower is better)
Translates to: HMSVDIKILDPD*PHPQLSLHQNF
Trigger: AAAATTTTGATGAAGCGATAATTGTGGATGCGGCAAGTCTGGATCCAGAATCTTTATATCAACGGACATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR TCA 90 bp GTCATTTCTCATTGCTTCTGTAATTGGTATTGGTTTAGCAGCATCTGGAGATATTATTTACAGAAATGGTaGCTTCGCAGAAACTCACTA +
Preference number: 4 (lower is better)
Translates to: VISHCFCNWYWFSSIWRYYLQKW*LRRNSL
Trigger: TAGTGAGTTTCTGCGAAGTCACCATTTCTGTAAATA...ATATCTCCAGATGCTGCTAAACCAATACCAATTACAGAAGCAATGAGAAATGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR GCA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAGTGAAAACTATATACTaGCATCAGAGGAAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FGKINIFQQKSHKCPESRVKTIY*HQRKEE
Trigger: TTCCTCCTTCCTCTGATGGCAGTATATAGTTTTCAC...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CCA 90 bp CCCTGCAGATATTGGATTCAATTTCTAATCGTACAACATCATCAAATCCAAGAGCATTGCTTCTGTAATTaGTATTGGTTTAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: PCRYWIQFLIVQHHQIQEHCFCN*YWFSSI
Trigger: GATGCTGCTAAACCAATACCAATTACAGAAGCAATG...CTCTTGGATTTGATGATGTTGTACGATTAGAAATTGAATCCAATATCTGCAGGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR GCA 90 bp CTTCAATTTCCACTGTGCTATTCTGCTTGGTTTTCCCACCTTATATTTTATGAGTTTTTCCATGTATCTTaGTCCATTGCACTAAAGACT +
Preference number: 4 (lower is better)
Translates to: LQFPLCYSAWFSHLIFYEFFHVS*SIALKT
Trigger: AGTCTTTAGTGCAATGGAGCAAGATACATGGAAAAA...CTCATAAAATATAAGGTGGGAAAACCAAGCAGAATAGCACAGTGGAAATTGAAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS GCA 90 bp AAGGCGCTGGCCGGCACGAGCAGCTTCACCCTGCACCCCAGTCCCTaGTTCCTCAGGAGAACCCGCCACGGCCTGCGGGTTCGAGGCGAT +
Preference number: 5 (lower is better)
Translates to: KALAGTSSFTLHPSP*FLRRTRHGLRVRGD
Trigger: ATCGCCTCGAACCCGCAGGCCGTGGCGGGTTCTCCTGAGGAAGCAGGGACTGGGGTGCAGGGTGAAGCTGCTCGTGCCGGCCAGCGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572155.1
CDS GCA 90 bp GTTCTTTGCCTTTCAAGGCGCTGGCCGGCACGAGCAGCTTCACCCTaGACCCCAGTCCCTGCTTCCTCAGGAGAACCCGCCACGGCCTGC +
Preference number: 5 (lower is better)
Translates to: VLCLSRRWPARAASP*TPVPASSGEPATAC
Trigger: GCAGGCCGTGGCGGGTTCTCCTGAGGAAGCAGGGACTGGGGTGCAGGGTGAAGCTGCTCGTGCCGGCCAGCGCCTTGAAAGGCAAAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572155.1
CDS-3UTR CAA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGGGAGTTGTGAAACAGTaGGGGAGTGGCCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWGVVKQ*GSGPPS
Trigger: GGAAGGTGGGCCACTCCCCAACTGTTTCACAACTCC...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp TCACCCTGTTCCGCTGAAGCTGCTAGCACCACGCTGCCACTCAAAGCTGCCTGGGCAGTTTACAACTACTaGGCATCTCTAGCTCAGAAG +
Preference number: 5 (lower is better)
Translates to: SPCSAEAASTTLPLKAAWAVYNY*ASLAQK
Trigger: CTTCTGAGCTAGAGATGCCAAGTAGTTGTAAACTGC...CCAGGCAGCTTTGAGTGGCAGCGTGGTGCTAGCAGCTTCAGCGGAACAGGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp CAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATGGAGTGTGCTCAGCTGACTCACCTGCTTaGGAAGGACAAAGCAAACCA +
Preference number: 5 (lower is better)
Translates to: QSCALRKRWRHVVNGVCSADSPA*EGQSKP
Trigger: TGGTTTGCTTTGTCCTTCCAAAGCAGGTGAGTCAGC...TGAGCACACTCCATTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAATCTCAATCATGTGCATaGAGGAAGCGCTGGCGCCAC +
Preference number: 5 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQSQSCA*RKRWRH
Trigger: GTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGA...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAAGGTGGAAGTCTAGGATaGTCTCCCATTCTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQGGSLG*SPILSW
Trigger: CCAGGAGAGAATGGGAGACAATCCTAGACTTCCACC...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp AAGATCTGCCCAGGTCACCAAAATGAGCGGCCTCCATGTGGCTTGGCTGCTTCTAGTGTCGTGCAAGACTaGTTCAAGGGTCTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: KICPGHQNERPPCGLAASSVVQD*FKGLRK
Trigger: CTTTCTAAGACCCTTGAACAAGTCTTGCACGACACT...AGAAGCAGCCAAGCCACATGGAGGCCGCTCATTTTGGTGACCTGGGCAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR CAA 90 bp GGCAGTCCTGCTGATGGCTGTGTGATCCCGATGCAGAAGCCAACTGAGCAGAAGTGTAGAGGAAGATTCTaGGGTTTCCATGGAAACTTG +
Preference number: 5 (lower is better)
Translates to: GSPADGCVIPMQKPTEQKCRGRF*GFHGNL
Trigger: CAAGTTTCCATGGAAACCCAAGAATCTTCCTCTACA...CTTCTGCTCAGTTGGCTTCTGCATCGGGATCACACAGCCATCAGCAGGACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCGCCAAAACGAAACAGTaGGGATCCACCTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRAKTKQ*GSTCPS
Trigger: AGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGC...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAACTCCTGTCCATCATATaGGCCCTTTTTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQLLSII*ALFGSK
Trigger: CTTGCTGCCAAAAAGGGCCAATATGATGGACAGGAG...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp ACCAAAATGAGCGGCCTCCATGTGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTCCGAAGTTCCATGAATaGAATGAAGTAAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: TKMSGLHVAWLLLKCGCPPKFHE*NEVRED
Trigger: GTCCTCCCTTACTTCATTCAATTCATGGAACTTCGG...AGGACAGCCACACTTAAGAAGCAGCCAAGCCACATGGAGGCCGCTCATTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR CAA 90 bp ACCAAAATGAGCGGCCTCCATGTGGCTTGGCTGCTTCTTAAGTGTGGCTGTCCTGAAAAGGAGTCCATGTaGGCAGAAATGGCATTGATT +
Preference number: 5 (lower is better)
Translates to: TKMSGLHVAWLLLKCGCPEKESM*AEMALI
Trigger: AATCAATGCCATTTCTGCCAACATGGACTCCTTTTC...AGGACAGCCACACTTAAGAAGCAGCCAAGCCACATGGAGGCCGCTCATTTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS-3UTR CAA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAACCGAAGTTCCATGAATaGAATGAAGTAAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQPKFHE*NEVRED
Trigger: GTCCTCCCTTACTTCATTCAATTCATGGAACTTCGG...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp AACTTGGTGAGTTCCTGCTCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCCTCACTAAAGTGCTCTaGCTCCATTGCACTAAAGAC +
Preference number: 5 (lower is better)
Translates to: NLVSSCSGHFKTERMGTVLTKVL*LHCTKD
Trigger: GTCTTTAGTGCAATGGAGCAAGAGCACTTTAGTGAG...GACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGAGCAGGAACTCACCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CAA 90 bp TTGTCATATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGGCCCGGAGTTGTGAAACAGTaGGGGAGTGGCCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: LSYKIMASFCASCPSYWPGVVKQ*GSGPPS
Trigger: GGAAGGTGGGCCACTCCCCAACTGTTTCACAACTCC...GGGCCAATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATATGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp TCTGGCCATTTCAAGACGGAGAGAATGGGCACTGTCACATTCCTGGGAAAGCAGGAAAAGGAGTCCATGTaGGCAGAAATGGCATTGATT +
Preference number: 5 (lower is better)
Translates to: SGHFKTERMGTVTFLGKQEKESM*AEMALI
Trigger: AATCAATGCCATTTCTGCCAACATGGACTCCTTTTC...CTGCTTTCCCAGGAATGTGACAGTGCCCATTCTCTCCGTCTTGAAATGGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CAA 90 bp TGTGCCAAAACGAAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTGCCAAAACGAAACAGTaGGGATCCACCTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: CAKTKQLGSTCPSSPQILAKTKQ*GSTCPS
Trigger: AGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGC...AAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CAA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCTTGGGAAGAACTGCTTaGTTCAAGGTGCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPLGRTA*FKVPQG
Trigger: CCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp GAGTTACCACTACGAGTGTGCATCAAGTATCAGTTCTATGCTTATCTGCTTCCCTGGCTGTCCTGCTACTaGAAAAGGAGTCCATGTTGG +
Preference number: 5 (lower is better)
Translates to: ELPLRVCIKYQFYAYLLPWLSCY*KRSPCW
Trigger: CCAACATGGACTCCTTTTCAAGTAGCAGGACAGCCA...GGGAAGCAGATAAGCATAGAACTGATACTTGATGCACACTCGTAGTGGTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAACCTTCCCTGCAGATATaGGATTCAATTTCTAATCGT +
Preference number: 5 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQPSLQI*DSISNR
Trigger: ACGATTAGAAATTGAATCCAATATCTGCAGGGAAGG...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp ACCCTTCTGTTAGCAGGGGAGAGAATGGTTTTAAGTATAGTGCATCTCAGGAGGATTCTGGATCCAGACTaGCCGCATCCACAATTATCG +
Preference number: 5 (lower is better)
Translates to: TLLLAGERMVLSIVHLRRILDPD*PHPQLS
Trigger: CGATAATTGTGGATGCGGCAAGTCTGGATCCAGAAT...CCTCCTGAGATGCACTATACTTAAAACCATTCTCTCCCCTGCTAACAGAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp TTTCCTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATTGCCCCAAGTCACTAGATTCTCGGATGAATaGCCCCAAGTCACTGACTCT +
Preference number: 5 (lower is better)
Translates to: FPYIRFRLRFSDELPQVTRFSDE*PQVTDS
Trigger: AGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCT...AGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR CAA 90 bp TTGGGAAGAACTGCTTTGTTCAAGGTGCCACAGGGGCAAAAGTGGAGTCATCGCATAGTGCTGTTTTCATaGGCTGTGTTGAAGAATCCA +
Preference number: 5 (lower is better)
Translates to: LGRTALFKVPQGQKWSHRIVLFS*AVLKNP
Trigger: TGGATTCTTCAACACAGCCAATGAAAACAGCACTAT...GCGATGACTCCACTTTTGCCCCTGTGGCACCTTGAACAAAGCAGTTCTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp CTTTCTTTCCTCTCAATCATGTGCATTGAGGAAGCGCTGGCGCCACGTGGTCAAAACTTGACCCATGACTaGTCAGTTTCCTTCCAAATT +
Preference number: 5 (lower is better)
Translates to: LSFLSIMCIEEALAPRGQNLTHD*SVSFQI
Trigger: AATTTGGAAGGAAACTGACAAGTCATGGGTCAAGTT...TTGACCACGTGGCGCCAGCGCTTCCTCAATGCACATGATTGAGAGGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS TCA 90 bp TTCTGTGCCTCCTGTCCATCATATTGGCCCTTTTTGGCAGCAAGCTaGGACTGGAAGTTATCTGCTGCCAACCAGAATTGTAAGATATTC +
Preference number: 5 (lower is better)
Translates to: FCASCPSYWPFLAAS*DWKLSAANQNCKIF
Trigger: GAATATCTTACAATTCTGGTTGGCAGCAGATAACTTCCAGTCTCAGCTTGCTGCCAAAAAGGGCCAATATGATGGACAGGAGGCACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000225737.11
ENST00000395536.7
ENST00000460046.2
CDS GCA 90 bp TTTGATTTCCTTACATCAGGTTCAGGCTCAGATTCTCGGATGAATTaGCCCAAGTCACTGACTCTTCCAAATGTCATCTTCCTGAGACGC +
Preference number: 5 (lower is better)
Translates to: FDFLTSGSGSDSRMN*PKSLTLPNVIFLRR
Trigger: GCGTCTCAGGAAGATGACATTTGGAAGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCTGAGCCTGAACCTGATGTAAGGAAATCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583951.1
CDS-3UTR CAA 90 bp TGTGCCAAAACGAAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTAGTGTCGTGCAAGACTaGTTCAAGGGTCTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: CAKTKQLGSTCPSSPQILSVVQD*FKGLRK
Trigger: CTTTCTAAGACCCTTGAACAAGTCTTGCACGACACT...AAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CAA 90 bp TGTGCCAAAACGAAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTCCGAAGTTCCATGAATaGAATGAAGTAAGGGAGGAC +
Preference number: 5 (lower is better)
Translates to: CAKTKQLGSTCPSSPQILPKFHE*NEVRED
Trigger: GTCCTCCCTTACTTCATTCAATTCATGGAACTTCGG...AAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CAA 90 bp ATGTCACTGACTATCATTTTAGCAATCTTCCAAGCTAGCTCTTCCTGGGCCTCAATTCTGGATCCAGACTaGCCGCATCCACAATTATCG +
Preference number: 5 (lower is better)
Translates to: MSLTIILAIFQASSSWASILDPD*PHPQLS
Trigger: CGATAATTGTGGATGCGGCAAGTCTGGATCCAGAAT...TGAGGCCCAGGAAGAGCTAGCTTGGAAGATTGCTAAAATGATAGTCAGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS GCA 90 bp CTTTTTCCATGTATCTTGCTCCATTGCACTAAAGACTATGGACTGTaGCAAAACGAAACAGTTGGGATCCACCTGTCCATCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: LFPCILLHCTKDYGL*QNETVGIHLSIFST
Trigger: TGTGGAGAAGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGCACAGTCCATAGTCTTTAGTGCAATGGAGCAAGATACATGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp TTAAGTGTGGCTGTCCTGCTACTTGAAAAGGAGTCCATGTTGGCAGAAATGGCAGAAAAGGAGTCCATGTaGGCAGAAATGGCATTGATT +
Preference number: 5 (lower is better)
Translates to: LSVAVLLLEKESMLAEMAEKESM*AEMALI
Trigger: AATCAATGCCATTTCTGCCAACATGGACTCCTTTTC...TGCCATTTCTGCCAACATGGACTCCTTTTCAAGTAGCAGGACAGCCACACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS-3UTR CAA 90 bp TCAATTTCTAATCGTACAACATCATCAAATCCAAGAGGATGTGTGGCTTGGAGGGCCAAAACGAAACAGTaGGGATCCACCTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: SISNRTTSSNPRGCVAWRAKTKQ*GSTCPS
Trigger: AGATGGACAGGTGGATCCCAACTGTTTCGTTTTGGC...CCTCCAAGCCACACATCCTCTTGGATTTGATGATGTTGTACGATTAGAAATTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp ATTATTGCACTACCAGCTTTGATCCATTATAATCGTACAGGACCATCGTACACGCTCCTGTCCATCATATaGGCCCTTTTTGGCAGCAAG +
Preference number: 5 (lower is better)
Translates to: IIALPALIHYNRTGPSYTLLSII*ALFGSK
Trigger: CTTGCTGCCAAAAAGGGCCAATATGATGGACAGGAG...CGTGTACGATGGTCCTGTACGATTATAATGGATCAAAGCTGGTAGTGCAATAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp TTTGATACGTTTGAAGTTCTGGGTTACCTTCTCCATGGTTGTCCAGGCCTGACGCTTTTTCCATGTATCTaGCTCCATTGCACTAAAGAC +
Preference number: 5 (lower is better)
Translates to: FDTFEVLGYLLHGCPGLTLFPCI*LHCTKD
Trigger: GTCTTTAGTGCAATGGAGCAAGATACATGGAAAAAG...CGTCAGGCCTGGACAACCATGGAGAAGGTAACCCAGAACTTCAAACGTATCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp AAACAGTTGGGATCCACCTGTCCATCTTCTCCACAAATCCTTGCTATGATGTCATGTAGAGGAAGATTCTaGGGTTTCCATGGAAACTTG +
Preference number: 5 (lower is better)
Translates to: KQLGSTCPSSPQILAMMSCRGRF*GFHGNL
Trigger: CAAGTTTCCATGGAAACCCAAGAATCTTCCTCTACA...TGACATCATAGCAAGGATTTGTGGAGAAGATGGACAGGTGGATCCCAACTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582611.5
CDS-3UTR CAA 90 bp ACCCTTCTGTTAGCAGGGGAGAGAATGGTTTTAAGTATAGTGCATCTCAGGAGGTGGAGGGAGAAGTACTaGTCATATAAAATCATGGCA +
Preference number: 5 (lower is better)
Translates to: TLLLAGERMVLSIVHLRRWREKY*SYKIMA
Trigger: TGCCATGATTTTATATGACAAGTACTTCTCCCTCCA...CCTCCTGAGATGCACTATACTTAAAACCATTCTCTCCCCTGCTAACAGAAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAAGACCTTCTCCATGGTaGTCCAGGCCTGACGTAATG +
Preference number: 5 (lower is better)
Translates to: FGKINIFQQKSHKCPESRRPSPW*SRPDVM
Trigger: CATTACGTCAGGCCTGGACAACCATGGAGAAGGTCT...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp CTTCAATTTCCACTGTGCTATTCTGCTTGGTTTTCCCACCTTATATTTTATGAGTTACCTTCTCCATGGTaGTCCAGGCCTGACGTAATG +
Preference number: 5 (lower is better)
Translates to: LQFPLCYSAWFSHLIFYELPSPW*SRPDVM
Trigger: CATTACGTCAGGCCTGGACAACCATGGAGAAGGTAA...CTCATAAAATATAAGGTGGGAAAACCAAGCAGAATAGCACAGTGGAAATTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATAAGTGTCGTGCAAGACTaGTTCAAGGGTCTTAGAAAG +
Preference number: 5 (lower is better)
Translates to: NLHKAFLLLLSMKQCASISVVQD*FKGLRK
Trigger: CTTTCTAAGACCCTTGAACAAGTCTTGCACGACACT...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp ATGTCACTGACTATCATTTTAGCAATCTTCCAAGCTAGCTCTTCCTGGGCCTCAAGAACATGGATCCTTTaGATTTCCTTACATCAGGTT +
Preference number: 5 (lower is better)
Translates to: MSLTIILAIFQASSSWASRTWIL*ISLHQV
Trigger: AACCTGATGTAAGGAAATCAAAAGGATCCATGTTCT...TGAGGCCCAGGAAGAGCTAGCTTGGAAGATTGCTAAAATGATAGTCAGTGACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578898.1
CDS-3UTR CAA 90 bp AACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTATACAGAGGCAGCAAGAGTaGCCCAAAACCACATTTTAT +
Preference number: 5 (lower is better)
Translates to: NLHKAFLLLLSMKQCASIQRQQE*PKTTFY
Trigger: ATAAAATGTGGTTTTGGGCAACTCTTGCTGCCTCTG...TATAGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp AAAAACTTACACAAAGCCTTTTTGCTTCTTCTGTCGATGAAACAGTGTGCCTCTGAAAAGGAGTCCATGTaGGCAGAAATGGCATTGATT +
Preference number: 5 (lower is better)
Translates to: KNLHKAFLLLLSMKQCASEKESM*AEMALI
Trigger: AATCAATGCCATTTCTGCCAACATGGACTCCTTTTC...AGAGGCACACTGTTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAAGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp ATTATTGCACTACCAGCTTTGATCCATTATAATCGTACAGGACCATCGTACACGCCTTCCCTGCAGATATaGGATTCAATTTCTAATCGT +
Preference number: 5 (lower is better)
Translates to: IIALPALIHYNRTGPSYTPSLQI*DSISNR
Trigger: ACGATTAGAAATTGAATCCAATATCTGCAGGGAAGG...CGTGTACGATGGTCCTGTACGATTATAATGGATCAAAGCTGGTAGTGCAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAAGATTCTCGGATGAATaGCCCCAAGTCACTGACTCT +
Preference number: 5 (lower is better)
Translates to: FGKINIFQQKSHKCPESRRFSDE*PQVTDS
Trigger: AGAGTCAGTGACTTGGGGCAATTCATCCGAGAATCT...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS TCA 90 bp ACTGTGTTTAGACTGTGTGCTCTTATTCGCGACCAAGTTGTTGAATaGAAACTTTCAGCCTCTAACCAAAATTTCACCAAATGCTCCATT +
Preference number: 5 (lower is better)
Translates to: TVFRLCALIRDQVVE*KLSASNQNFTKCSI
Trigger: AATGGAGCATTTGGTGAAATTTTGGTTAGAGGCTGAAAGTTTTCATTCAACAACTTGGTCGCGAATAAGAGCACACAGTCTAAACACAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000225737.11
ENST00000395536.7
ENST00000572155.1
ENST00000582611.5
CDS-3UTR CAA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGACTCACTAAAGTGCTCTaGCTCCATTGCACTAAAGAC +
Preference number: 5 (lower is better)
Translates to: FGKINIFQQKSHKCPESRLTKVL*LHCTKD
Trigger: GTCTTTAGTGCAATGGAGCAAGAGCACTTTAGTGAG...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp CCCTGCAGATATTGGATTCAATTTCTAATCGTACAACATCATCAAATCCAAGAGTGGAGGGAGAAGTACTaGTCATATAAAATCATGGCA +
Preference number: 5 (lower is better)
Translates to: PCRYWIQFLIVQHHQIQEWREKY*SYKIMA
Trigger: TGCCATGATTTTATATGACAAGTACTTCTCCCTCCA...CTCTTGGATTTGATGATGTTGTACGATTAGAAATTGAATCCAATATCTGCAGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp AAGTACTTGTCATATAAAATCATGGCATCATTCTGTGCCTCCTGTCCATCATATTGTAGTTTGATACGTTaGAAGTTCTGGGTTACCTTC +
Preference number: 5 (lower is better)
Translates to: KYLSYKIMASFCASCPSYCSLIR*KFWVTF
Trigger: GAAGGTAACCCAGAACTTCAAACGTATCAAACTACA...ATATGATGGACAGGAGGCACAGAATGATGCCATGATTTTATATGACAAGTACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460046.2
CDS-3UTR CAA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGAAGAACATGGATCCTTTaGATTTCCTTACATCAGGTT +
Preference number: 5 (lower is better)
Translates to: FGKINIFQQKSHKCPESRRTWIL*ISLHQV
Trigger: AACCTGATGTAAGGAAATCAAAAGGATCCATGTTCT...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS-3UTR CAA 90 bp TTTGGAAAGATCAATATATTTCAACAGAAGAGCCATAAATGCCCTGAAAGCAGATTACACAAAGCCTTTTaGCTTCTTCTGTCGATGAAA +
Preference number: 5 (lower is better)
Translates to: FGKINIFQQKSHKCPESRLHKAF*LLLSMK
Trigger: TTTCATCGACAGAAGAAGCAAAAAGGCTTTGTGTAA...TCTGCTTTCAGGGCATTTATGGCTCTTCTGTTGAAATATATTGATCTTTCCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000225737.11
CDS GCA 72 bp GCAACCGGCCCGGACTTCCGGGTCCAGAGGGGCCGCTaGACTAGCGCGAAAAGGGACCCTTCTTCCGGGAGT +
Preference number: 6 (lower is better)
Translates to: ATGPDFRVQRGR*TSAKRDPSSGS
Trigger: ACTCCCGGAAGAAGGGTCCCTTTTCGCGCTAGTGCAGCGGCCCCTCTGGACCCGGAAGTCCGGGCCGGTTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000225737.11
ENST00000571858.1
ENST00000572341.5
ENST00000576896.5
ENST00000582611.5
CDS TCA 72 bp GAGTCCATGTTGGCAGAAATGGCATTGATTGCAACATaGCTTGGTCCTGCAGCCTTTAATGGACTTCACATC +
Preference number: 6 (lower is better)
Translates to: ESMLAEMALIAT*LGPAAFNGLHI
Trigger: GATGTGAAGTCCATTAAAGGCTGCAGGACCAAGTCATGTTGCAATCAATGCCATTTCTGCCAACATGGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572341.5
CDS TCA 72 bp AAGGTCAGGAGATCGAGACCATACTGGCTAACATGGTaGAACTCTGTCTCTACTTTAATGGACTTCACATCT +
Preference number: 6 (lower is better)
Translates to: KVRRSRPYWLTW*NSVSTLMDFTS
Trigger: AGATGTGAAGTCCATTAAAGTAGAGACAGAGTTTCACCATGTTAGCCAGTATGGTCTCGATCTCCTGACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571858.1
CDS CAA 90 bp TCTTCCCGGCATATGTCCGTTGATATAAAGATTCTGGATCCAGACTaGCCGCATCCACAATTATCGCTTCATCAAAATTTTTCAGTATTT +
Preference number: 6 (lower is better)
Translates to: SSRHMSVDIKILDPD*PHPQLSLHQNFSVF
Trigger: AAATACTGAAAAATTTTGATGAAGCGATAATTGTGGATGCGGCAAGTCTGGATCCAGAATCTTTATATCAACGGACATATGCCGGGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000225737.11
ENST00000395536.7
ENST00000578898.1
CDS CAA 72 bp TGTTTAGACTGTGTGCTCTTATTCGCGACCAAGTTGTaGAATGAAAACTTTCAGCCTCTAACCAAAATTTCA +
Preference number: 6 (lower is better)
Translates to: CLDCVLLFATKL*NENFQPLTKIS
Trigger: TGAAATTTTGGTTAGAGGCTGAAAGTTTTCATTCAACAACTTGGTCGCGAATAAGAGCACACAGTCTAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000225737.11
ENST00000395536.7
ENST00000572155.1
ENST00000582611.5