Pregenerated sensors for AKAP1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000263004Ensembl transcript IDs: ENST00000576313.1, ENST00000576871.1, ENST00000656535.1
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCTTTTCCAGGGCGCTCTCCGTCCCGAGGCAGGAGATGGCCTGGTTaGCCCTTCGAGACAAGGCGGCAAAACCGGTGCTGGGCTTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: PFPGRSPSRGRRWPG*PFETRRQNRCWACG Trigger: CCCGCAAGCCCAGCACCGGTTTTGCCGCCTTGTCTCGAAGGGTCAACCAGGCCATCTCCTGCCTCGGGACGGAGAGCGCCCTGGAAAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS CCA 90 bp | TCCGCCTTTTCCAGGGCGCTCTCCGTCCCGAGGCAGGAGATGGCCTaGTTGACCCTTCGAGACAAGGCGGCAAAACCGGTGCTGGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SAFSRALSVPRQEMA*LTLRDKAAKPVLGL Trigger: CAAGCCCAGCACCGGTTTTGCCGCCTTGTCTCGAAGGGTCAACCAGGCCATCTCCTGCCTCGGGACGGAGAGCGCCCTGGAAAAGGCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS TCA 90 bp | AGTGGCAGTTGGTTAATCCATGGGTTCCAAGTCAGATGGCTTGGGTaGAAATCTTGCCATCGCTCTTGTGTGACTAAGGTCGGCCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGSWLIHGFQVRWLG*KSCHRSCVTKVGPS Trigger: GGAGGGGCCGACCTTAGTCACACAAGAGCGATGGCAAGATTTTCACCCAAGCCATCTGACTTGGAACCCATGGATTAACCAACTGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS GCA 90 bp | GCCGGCATCTGTTTCTGTATAAACTGCTCCCTTGGTCTCTGGATTTaGCTCCAGTGGCAGTTGGTTAATCCATGGGTTCCAAGTCAGATG | + |
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Preference number: 5 (lower is better) Translates to: AGICFCINCSLGLWI*LQWQLVNPWVPSQM Trigger: CATCTGACTTGGAACCCATGGATTAACCAACTGCCACTGGAGGCAAATCCAGAGACCAAGGGAGCAGTTTATACAGAAACAGATGCCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS CCA 90 bp | TGTTTCTGTATAAACTGCTCCCTTGGTCTCTGGATTTGCCTCCAGTaGCAGTTGGTTAATCCATGGGTTCCAAGTCAGATGGCTTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: CFCINCSLGLWICLQ*QLVNPWVPSQMAWV Trigger: CACCCAAGCCATCTGACTTGGAACCCATGGATTAACCAACTGCCACTGGAGGCAAATCCAGAGACCAAGGGAGCAGTTTATACAGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS TCA 90 bp | CTGCAAAGAATCTTCTCAAAACTGGGTAAAGCCTGCATTCCAAACTaGCTTCATCACGGAACCCCCTTCCAAACAATACTTTCCAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: LQRIFSKLGKACIPN*LHHGTPFQTILSSL Trigger: AAGGCTGGAAAGTATTGTTTGGAAGGGGGTTCCGTGATGAAGTCAGTTTGGAATGCAGGCTTTACCCAGTTTTGAGAAGATTCTTTGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS CCA 90 bp | GCCTCTTCCTTACTTCTGGTGGTTTGCTGGCGATCTGGCATTCTTTaGCTTATAGATATATTAATCCAATTTTCTGTCGTCACATGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ASSLLLVVCWRSGIL*LIDILIQFSVVTWC Trigger: GCACCATGTGACGACAGAAAATTGGATTAATATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAGGAAGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS CCA 90 bp | GTAGGGGAATCCTTCTTTGCCTCTTCCTTACTTCTGGTGGTTTGCTaGCGATCTGGCATTCTTTGGCTTATAGATATATTAATCCAATTT | + |
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Preference number: 5 (lower is better) Translates to: VGESFFASSLLLVVC*RSGILWLIDILIQF Trigger: AAATTGGATTAATATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAGGAAGAGGCAAAGAAGGATTCCCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS CCA 90 bp | ATCCTTCTTTGCCTCTTCCTTACTTCTGGTGGTTTGCTGGCGATCTaGCATTCTTTGGCTTATAGATATATTAATCCAATTTTCTGTCGT | + |
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Preference number: 5 (lower is better) Translates to: ILLCLFLTSGGLLAI*HSLAYRYINPIFCR Trigger: ACGACAGAAAATTGGATTAATATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAGGAAGAGGCAAAGAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS GCA 90 bp | TTATTTAGCTCTTACTGGAAATCATATTGGTCTGTGGAAGTGCTTTaGAAAGTGTGTTCCATCAGCCAGGAGAAAGTTTTCATACTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LFSSYWKSYWSVEVL*KVCSISQEKVFILH Trigger: GTGAAGTATGAAAACTTTCTCCTGGCTGATGGAACACACTTTGCAAAGCACTTCCACAGACCAATATGATTTCCAGTAAGAGCTAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS GCA 90 bp | AAAATTTATTTAGCTCTTACTGGAAATCATATTGGTCTGTGGAAGTaGTTTGCAAAGTGTGTTCCATCAGCCAGGAGAAAGTTTTCATAC | + |
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Preference number: 5 (lower is better) Translates to: KIYLALTGNHIGLWK*FAKCVPSARRKFSY Trigger: GTATGAAAACTTTCTCCTGGCTGATGGAACACACTTTGCAAAGCACTTCCACAGACCAATATGATTTCCAGTAAGAGCTAAATAAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS CCA 90 bp | ACTAACAAAATTTATTTAGCTCTTACTGGAAATCATATTGGTCTGTaGAAGTGCTTTGCAAAGTGTGTTCCATCAGCCAGGAGAAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: TNKIYLALTGNHIGL*KCFAKCVPSARRKF Trigger: AAACTTTCTCCTGGCTGATGGAACACACTTTGCAAAGCACTTCCACAGACCAATATGATTTCCAGTAAGAGCTAAATAAATTTTGTTAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS CAA 90 bp | GCCTTTTCCAGGGCGCTCTCCGTCCCGAGGCAGGAGATGGCCTGGTaGACCCTTCGAGACAAGGCGGCAAAACCGGTGCTGGGCTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: AFSRALSVPRQEMAW*TLRDKAAKPVLGLR Trigger: CCGCAAGCCCAGCACCGGTTTTGCCGCCTTGTCTCGAAGGGTCAACCAGGCCATCTCCTGCCTCGGGACGGAGAGCGCCCTGGAAAAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS CAA 72 bp | AGGGCGCTCTCCGTCCCGAGGCAGGAGATGGCCTGGTaGACCCTTCGAGACAAGGCGGCAAAACCGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RALSVPRQEMAW*TLRDKAAKPVL Trigger: CAGCACCGGTTTTGCCGCCTTGTCTCGAAGGGTCAACCAGGCCATCTCCTGCCTCGGGACGGAGAGCGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS CAA 90 bp | GCCTGGTTGACCCTTCGAGACAAGGCGGCAAAACCGGTGCTGGGCTaGCGGGGCAGGGAATCAAGGTTCCTCCGGTTGCTGTACCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: AWLTLRDKAAKPVLG*RGRESRFLRLLYRP Trigger: GGGACGGTACAGCAACCGGAGGAACCTTGATTCCCTGCCCCGCAAGCCCAGCACCGGTTTTGCCGCCTTGTCTCGAAGGGTCAACCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS GCA 72 bp | CCCTTCGAGACAAGGCGGCAAAACCGGTGCTGGGCTTaGGGGGCAGGGAATCAAGGTTCCTCCGGTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: PFETRRQNRCWA*GAGNQGSSGCC Trigger: ACAGCAACCGGAGGAACCTTGATTCCCTGCCCCGCAAGCCCAGCACCGGTTTTGCCGCCTTGTCTCGAAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS CAA 72 bp | ACCCTTCGAGACAAGGCGGCAAAACCGGTGCTGGGCTaGCGGGGCAGGGAATCAAGGTTCCTCCGGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: TLRDKAAKPVLG*RGRESRFLRLL Trigger: CAGCAACCGGAGGAACCTTGATTCCCTGCCCCGCAAGCCCAGCACCGGTTTTGCCGCCTTGTCTCGAAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS CCA 72 bp | GCTCCCTTGGTCTCTGGATTTGCCTCCAGTGGCAGTTaGTTAATCCATGGGTTCCAAGTCAGATGGCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: APLVSGFASSGS*LIHGFQVRWLG Trigger: CCCAAGCCATCTGACTTGGAACCCATGGATTAACCAACTGCCACTGGAGGCAAATCCAGAGACCAAGGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS CAA 72 bp | TGCTCCCTTGGTCTCTGGATTTGCCTCCAGTGGCAGTaGGTTAATCCATGGGTTCCAAGTCAGATGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CSLGLWICLQWQ*VNPWVPSQMAW Trigger: CCAAGCCATCTGACTTGGAACCCATGGATTAACCAACTGCCACTGGAGGCAAATCCAGAGACCAAGGGAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS GCA 72 bp | TGGGAAGAAGTCCAAATCAAGGTGTCAGCAGGGCCATaGTCCCTCTCTGAAACCTGTAGGGGAATCCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: WEEVQIKVSAGP*SLSETCRGILL Trigger: AAGAAGGATTCCCCTACAGGTTTCAGAGAGGGAGCATGGCCCTGCTGACACCTTGATTTGGACTTCTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS GCA 72 bp | TGTTTCTGTATAAACTGCTCCCTTGGTCTCTGGATTTaGCTCCAGTGGCAGTTGGTTAATCCATGGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: CFCINCSLGLWI*LQWQLVNPWVP Trigger: TGGAACCCATGGATTAACCAACTGCCACTGGAGGCAAATCCAGAGACCAAGGGAGCAGTTTATACAGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000576313.1 ENST00000576871.1 ENST00000656535.1 |
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| CDS TCA 72 bp | TCTGAGGTACTGGGGGTTAGGGTTTCAACGTTCTTTTaGAGGGACCTAATTCCACCCATAACAGACCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SEVLGVRVSTFF*RDLIPPITDLF Trigger: AAACAGGTCTGTTATGGGTGGAATTAGGTCCCTTCAAAAGAACGTTGAAACCCTAACCCCCAGTACCTCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000576313.1 |
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| CDS CAA 72 bp | GGAATCCTTCTTTGCCTCTTCCTTACTTCTGGTGGTTaGCTGGCGATCTGGCATTCTTTGGCTTATAGATAT | + |
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Preference number: 6 (lower is better) Translates to: GILLCLFLTSGG*LAIWHSLAYRY Trigger: ATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAGGAAGAGGCAAAGAAGGATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS TCA 72 bp | ATCTTCTCAAAACTGGGTAAAGCCTGCATTCCAAACTaGCTTCATCACGGAACCCCCTTCCAAACAATACTT | + |
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Preference number: 6 (lower is better) Translates to: IFSKLGKACIPN*LHHGTPFQTIL Trigger: AAGTATTGTTTGGAAGGGGGTTCCGTGATGAAGTCAGTTTGGAATGCAGGCTTTACCCAGTTTTGAGAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS GCA 72 bp | GAATCCTTCTTTGCCTCTTCCTTACTTCTGGTGGTTTaGTGGCGATCTGGCATTCTTTGGCTTATAGATATA | + |
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Preference number: 6 (lower is better) Translates to: ESFFASSLLLVV*WRSGILWLIDI Trigger: TATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAGGAAGAGGCAAAGAAGGATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS GCA 72 bp | TTAGCTCTTACTGGAAATCATATTGGTCTGTGGAAGTaGTTTGCAAAGTGTGTTCCATCAGCCAGGAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LALTGNHIGLWK*FAKCVPSARRK Trigger: CTTTCTCCTGGCTGATGGAACACACTTTGCAAAGCACTTCCACAGACCAATATGATTTCCAGTAAGAGCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS CAA 90 bp | TGCCTCTTCCTTACTTCTGGTGGTTTGCTGGCGATCTGGCATTCTTaGGCTTATAGATATATTAATCCAATTTTCTGTCGTCACATGGTG | + |
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Preference number: 6 (lower is better) Translates to: CLFLTSGGLLAIWHS*AYRYINPIFCRHMV Trigger: CACCATGTGACGACAGAAAATTGGATTAATATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAGGAAGAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS TCA 72 bp | ACACTACATTCTTTCTTTGGAGATTCACAAAGGCCCTaGGAAGTCCTGCAAAGAATCTTCTCAAAACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TLHSFFGDSQRP*EVLQRIFSKLG Trigger: ACCCAGTTTTGAGAAGATTCTTTGCAGGACTTCTCAGGGCCTTTGTGAATCTCCAAAGAAAGAATGTAGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS GCA 72 bp | ATAGATATATTAATCCAATTTTCTGTCGTCACATGGTaGTGTCTCTGTGTCTCCCTGCCTTCACATGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: IDILIQFSVVTW*CLCVSLPSHGC Trigger: ACAACCATGTGAAGGCAGGGAGACACAGAGACAGCACCATGTGACGACAGAAAATTGGATTAATATATCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS CCA 72 bp | TCCTTCTTTGCCTCTTCCTTACTTCTGGTGGTTTGCTaGCGATCTGGCATTCTTTGGCTTATAGATATATTA | + |
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Preference number: 6 (lower is better) Translates to: SFFASSLLLVVC*RSGILWLIDIL Trigger: TAATATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAGGAAGAGGCAAAGAAGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS CCA 72 bp | TGCCTCTTCCTTACTTCTGGTGGTTTGCTGGCGATCTaGCATTCTTTGGCTTATAGATATATTAATCCAATT | + |
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Preference number: 6 (lower is better) Translates to: CLFLTSGGLLAI*HSLAYRYINPI Trigger: AATTGGATTAATATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAGGAAGAGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS CCA 72 bp | ATTTATTTAGCTCTTACTGGAAATCATATTGGTCTGTaGAAGTGCTTTGCAAAGTGTGTTCCATCAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: IYLALTGNHIGL*KCFAKCVPSAR Trigger: CCTGGCTGATGGAACACACTTTGCAAAGCACTTCCACAGACCAATATGATTTCCAGTAAGAGCTAAATAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS CCA 72 bp | TTTTTCTATTCTTCAGTCTGTAACAATAACTCCCTGTaGGTTAATGCCGGCATCTGTTTCTGTATAAACTGC | + |
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Preference number: 6 (lower is better) Translates to: FFYSSVCNNNSL*VNAGICFCINC Trigger: GCAGTTTATACAGAAACAGATGCCGGCATTAACCCACAGGGAGTTATTGTTACAGACTGAAGAATAGAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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| CDS CAA 72 bp | CTTACTTCTGGTGGTTTGCTGGCGATCTGGCATTCTTaGGCTTATAGATATATTAATCCAATTTTCTGTCGT | + |
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Preference number: 6 (lower is better) Translates to: LTSGGLLAIWHS*AYRYINPIFCR Trigger: ACGACAGAAAATTGGATTAATATATCTATAAGCCAAAGAATGCCAGATCGCCAGCAAACCACCAGAAGTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000576871.1 |
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| CDS CAA 90 bp | TCACAATGTTCTATGGAAGCTAAGCTGGGTGGAATAAGGCTCTATTaGGCTTTTTCTTTTTCTATTCTTCAGTCTGTAACAATAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: SQCSMEAKLGGIRLY*AFSFSILQSVTITP Trigger: GGGAGTTATTGTTACAGACTGAAGAATAGAAAAAGAAAAAGCCAAATAGAGCCTTATTCCACCCAGCTTAGCTTCCATAGAACATTGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000656535.1 |
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