RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AKAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000121057

Ensembl transcript IDs: ENST00000314126.4, ENST00000337714.8, ENST00000481416.5, ENST00000539273.5, ENST00000570423.5, ENST00000571629.5, ENST00000572156.1, ENST00000572557.5, ENST00000572814.1, ENST00000573085.1, ENST00000573326.1, ENST00000574683.1, ENST00000575186.5, ENST00000575322.1, ENST00000576295.5, ENST00000576591.1, ENST00000621116.4

Found 1152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGTCGAGGCTGCGCAGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAATGACC +
Preference number: 1 (lower is better)
Translates to: WSRLRSAWKVGCVCC*TNRCPALTWLTTMT
Trigger: GGTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTGCGCAGCCTCGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR GCA 90 bp TGCTGGTCGAGGCTGCGCAGCGCGTGGAAGGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAATG +
Preference number: 1 (lower is better)
Translates to: CWSRLRSAWKVGCVC*CTNRCPALTWLTTM
Trigger: CATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTGCGCAGCCTCGACCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR GCA 90 bp ATCTGCTGGTCGAGGCTGCGCAGCGCGTGGAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACA +
Preference number: 1 (lower is better)
Translates to: ICWSRLRSAWKVGCV*CCTNRCPALTWLTT
Trigger: TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTGCGCAGCCTCGACCAGCAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR GCA 90 bp CGCAGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTGACCACAATGACCTCCACGGTGATG +
Preference number: 1 (lower is better)
Translates to: RSAWKVGCVCCCTNR*PALTWLTTMTSTVM
Trigger: CATCACCGTGGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR CCA 90 bp CCCTCTTATATCCGCCGTAGTCCACGTATCGAATCTCCACTTCGTTaGTCTCCTCGTAGGAGGCAACCACTTGGGCTCGCCACCAGGCCC +
Preference number: 1 (lower is better)
Translates to: PSYIRRSPRIESPLR*SPRRRQPLGLATRP
Trigger: GGGCCTGGTGGCGAGCCCAAGTGGTTGCCTCCTACGAGGAGACCAACGAAGTGGAGATTCGATACGTGGACTACGGCGGATATAAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR CCA 90 bp TACCATACAGTCACCTGTCCAGTGTGCAGGAAGCCACAGGGGCCCTaGCCAGAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTT +
Preference number: 1 (lower is better)
Translates to: YHTVTCPVCRKPQGP*PEGPRAEAALQSLL
Trigger: AAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTCTGGCCAGGGCCCCTGTGGCTTCCTGCACACTGGACAGGTGACTGTATGGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR TCA 90 bp TCGTCTGACAGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTaGAACGGCAGGGTGACAAAGTCAGACCTGATTTGCCGGAGCACG +
Preference number: 1 (lower is better)
Translates to: SSDRGITLSRRTSAP*NGRVTKSDLICRST
Trigger: CGTGCTCCGGCAAATCAGGTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCTGTCAGACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR CCA 90 bp TTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTCATaGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTCTGACAGGG +
Preference number: 1 (lower is better)
Translates to: LSPEQAVLYSPSSRS*RHLLPVKTGHRLTG
Trigger: CCCTGTCAGACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
3UTR GCA 90 bp TGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTAAGTGCTTTGGCACCTCGATCTCCC +
Preference number: 1 (lower is better)
Translates to: WHQMFASENSHSAPA*QLADRLSALAPRSP
Trigger: GGGAGATCGAGGTGCCAAAGCACTTAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR GCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCTCTCAGTCTTCTTGAGACTGCAACA +
Preference number: 1 (lower is better)
Translates to: LDLPDDEVDLLRVGA*LGILEALSLLETAT
Trigger: TGTTGCAGTCTCAAGAAGACTGAGAGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR CCA 90 bp AGATCTGGACGCTCTGGGTGTAAGGCAGGGTTGAAATGTAGATCTTaGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCT +
Preference number: 1 (lower is better)
Translates to: RSGRSGCKAGLKCRS*HQMFASENSHSAPA
Trigger: AGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTACATTTCAACCCTGCCTTACACCCAGAGCGTCCAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR TCA 90 bp GCCTTCTATGTGGCAGATCTGGACGCTCTGGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCAC +
Preference number: 1 (lower is better)
Translates to: AFYVADLDALGVRQG*NVDLGTRCLLQKTH
Trigger: GTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTACATTTCAACCCTGCCTTACACCCAGAGCGTCCAGATCTGCCACATAGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR TCA 90 bp GCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTaGCATGTGGCTGGAAGAATCTTGAGTTCCCTTTGTTCTCCAGTG +
Preference number: 1 (lower is better)
Translates to: AKSRSCTAEFTSTYR*HVAGRILSSLCSPV
Trigger: CACTGGAGAACAAAGGGAACTCAAGATTCTTCCAGCCACATGTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR CAA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTaGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATGAGC +
Preference number: 2 (lower is better)
Translates to: GCVCCCTNRCPALTW*TTMTSTVMPSGSMS
Trigger: GCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR CAA 90 bp TGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATaGACCTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGC +
Preference number: 2 (lower is better)
Translates to: WKVGCVCCCTNRCPA*TWLTTMTSTVMPSG
Trigger: GCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR GCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACACATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 2 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR GCA 90 bp CAGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTGAAACGGCAGGGTGACTGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTG +
Preference number: 2 (lower is better)
Translates to: QGHHTVQKDFCSLKRQGDCCTNR*PALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCA...GTCACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR GCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCA +
Preference number: 2 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDGCVCC*TNRCPA
Trigger: TGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR CCA 90 bp GGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAAGACCGTTATTTCCACTaGGGTGGGCAAGGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: GSSMGVKGLCSSCLPTGQDRYFH*GGQGGD
Trigger: ATCCCCACCTTGCCCACCCCAGTGGAAATAACGGTC...TTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR GCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACCATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 2 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR GCA 90 bp AGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAAGCAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGC +
Preference number: 2 (lower is better)
Translates to: SSQITVSTIQSPVQCAGSKVGCV*CCTNRC
Trigger: GCACCTGTTCGTGCAGCAGCACACACACCCTACCTT...GCTTCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR CCA 90 bp AGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAAGCTGCCCGGCATTGACCTaGTTGACCACAATGACCTCC +
Preference number: 2 (lower is better)
Translates to: SSQITVSTIQSPVQCAGSCPALT*LTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCA...GCTTCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR CCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCAAGCCACAGGGGCCCTaGCCAGAGGGGCCAAGAGCA +
Preference number: 2 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFKPQGP*PEGPRA
Trigger: TGCTCTTGGCCCCTCTGGCCAGGGCCCCTGTGGCTT...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR TCA 90 bp ATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTAGCTCTCAGTCTTCTTaGGACTGCAACAGCTATCCA +
Preference number: 2 (lower is better)
Translates to: ISQMMRSTFLGLEPAWAFSSQSS*DCNSYP
Trigger: TGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCT...AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR CCA 90 bp AGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAAGCAATTACAACCAGGCTTaGCAGGATACCAGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SSQITVSTIQSPVQCAGSNYNQA*QDTSSP
Trigger: AGGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATT...GCTTCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR TCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACTGTTCATCTTTGACTTaGGTGCCAAGCCCAATTTCA +
Preference number: 2 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDCSSLT*VPSPIS
Trigger: TGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACA...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAAGCAACATACATCCCTaGCCTGTCTGCCAGTTTGTT +
Preference number: 2 (lower is better)
Translates to: KQHTSLACLPVCLVFAGESNIHP*PVCQFV
Trigger: AACAAACTGGCAGACAGGCCAGGGATGTATGTTGCT...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR CAA 90 bp AGCCTTCTATGTGGCAGATCTGGACGCTCTGGGTGTAAGGCAGGGTaGAAATGTAGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCA +
Preference number: 2 (lower is better)
Translates to: SLLCGRSGRSGCKAG*KCRSWHQMFASENS
Trigger: TGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTACATTTCAACCCTGCCTTACACCCAGAGCGTCCAGATCTGCCACATAGAAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR CCA 90 bp GGCATTGACCTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATTTGAAATGTAGATCTTaGCACCAGATGTTTGCTTCA +
Preference number: 2 (lower is better)
Translates to: GIDLVDHNDLHGDAIRQHLKCRS*HQMFAS
Trigger: TGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA...ATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAGGTCAATGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR CCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTTTATTTCCACTGGGGTaGGCAAGGTGGGGATTCCAG +
Preference number: 2 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLLFPLG*ARWGFQ
Trigger: CTGGAATCCCCACCTTGCCCACCCCAGTGGAAATAA...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR CCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTGAATCTCCACTTCGTTaGTCTCCTCGTAGGAGGCAA +
Preference number: 2 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLESPLR*SPRRRQ
Trigger: TTGCCTCCTACGAGGAGACCAACGAAGTGGAGATTC...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR TCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACC +
Preference number: 2 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPGVRQG*NVDLGT
Trigger: GGTGCCAAGATCTACATTTCAACCCTGCCTTACACC...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR TCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCATCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR TCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCACTTCTACCTACAGGTaGCATGTGGCTGGAAGAATC +
Preference number: 2 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFTSTYR*HVAGRI
Trigger: GATTCTTCCAGCCACATGTCACCTGTAGGTAGAAGT...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR GCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCGCCAAGAGCAGAAGCTaGACTGCAGAGTTTACTTCT +
Preference number: 2 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFAKSRS*TAEFTS
Trigger: AGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGC...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR TCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACTCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CCA 90 bp TTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCAATAGGACTACAGTATaGAGAAAGAAAGGACTTTCT +
Preference number: 2 (lower is better)
Translates to: LDCNLSPEQAVLYSPSSRNRTTV*RKKGLS
Trigger: AGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATT...GCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
3UTR-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTTCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: LVKHYPLALRREPIVPSFSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGATCTCAGGAAGCAGCATaGGGGTCAAAGGCTTGTGTA +
Preference number: 2 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGSQEAA*GSKACV
Trigger: TACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
3UTR-3UTR TCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGATCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR TCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAACTTCTACCTACAGGTaGCATGTGGCTGGAAGAATC +
Preference number: 2 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGTSTYR*HVAGRI
Trigger: GATTCTTCCAGCCACATGTCACCTGTAGGTAGAAGT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR TCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTGTTCATCTTTGACTTaGGTGCCAAGCCCAATTTCA +
Preference number: 2 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFCSSLT*VPSPIS
Trigger: TGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACA...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR TCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTTCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 2 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCAAAGAAAGGACTTTCTaGAGAGGACAATGTTTGTTA +
Preference number: 2 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPKERTF*RGQCLL
Trigger: TAACAAACATTGTCCTCTCCAGAAAGTCCTTTCTTT...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR TCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTTGTTCATCTTTGACTTaGGTGCCAAGCCCAATTTCA +
Preference number: 2 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCCSSLT*VPSPIS
Trigger: TGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACA...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAAATAGGACTACAGTATaGAGAAAGAAAGGACTTTCT +
Preference number: 2 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGNRTTV*RKKGLS
Trigger: AGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR GCA 72 bp TCGAGGCTGCGCAGCGCGTGGAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGCCCGGCATTGACCTGG +
Preference number: 3 (lower is better)
Translates to: SRLRSAWKVGCV*CCTNRCPALTW
Trigger: CCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTGCGCAGCCTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR GCA 72 bp CTGCGCAGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCATTGACCTGGTTGACC +
Preference number: 3 (lower is better)
Translates to: LRSAWKVGCVCC*TNRCPALTWLT
Trigger: GGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTGCGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR GCA 72 bp AGGCTGCGCAGCGCGTGGAAGGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCGGCATTGACCTGGTTG +
Preference number: 3 (lower is better)
Translates to: RLRSAWKVGCVC*CTNRCPALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTGCGCAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR CAA 90 bp CAGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTTCGACCTTCTTAGGGTaGGAGCCTGCCTGGGCATTT +
Preference number: 3 (lower is better)
Translates to: QRVEGRVCVLLHEQVPGISTFLG*EPAWAF
Trigger: AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGA...AATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR CAA 90 bp AGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGGCCTGCCTGGGCATTTaGGAAGCTCTCAGTCTTCTT +
Preference number: 3 (lower is better)
Translates to: SAWKVGCVCCCTNRCPALACLGI*EALSLL
Trigger: AAGAAGACTGAGAGCTTCCAAAATGCCCAGGCAGGC...CAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR CAA 90 bp GCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCGCCTGCCTGGGCATTTaGGAAGCTCTCAGTCTTCTT +
Preference number: 3 (lower is better)
Translates to: AWKVGCVCCCTNRCPALTACLGI*EALSLL
Trigger: AAGAAGACTGAGAGCTTCCAAAATGCCCAGGCAGGC...GGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR GCA 72 bp TGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTGACCACAATGACCTCC +
Preference number: 3 (lower is better)
Translates to: WKVGCVCCCTNR*PALTWLTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR CCA 72 bp ATCCGCCGTAGTCCACGTATCGAATCTCCACTTCGTTaGTCTCCTCGTAGGAGGCAACCACTTGGGCTCGCC +
Preference number: 3 (lower is better)
Translates to: IRRSPRIESPLR*SPRRRQPLGLA
Trigger: GGCGAGCCCAAGTGGTTGCCTCCTACGAGGAGACCAACGAAGTGGAGATTCGATACGTGGACTACGGCGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR CCA 72 bp GAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTCATaGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGT +
Preference number: 3 (lower is better)
Translates to: EQAVLYSPSSRS*RHLLPVKTGHR
Trigger: ACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAATACAGCACTGCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
3UTR-3UTR CAA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCGGCCTGTCTGCCAGTTaGTTTGGTTTTTGCCGGGGA +
Preference number: 3 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFGLSAS*FGFCRG
Trigger: TCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCC...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR TCA 72 bp AGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTaGAACGGCAGGGTGACAAAGTCAGACCTGATTTGC +
Preference number: 3 (lower is better)
Translates to: RGITLSRRTSAP*NGRVTKSDLIC
Trigger: GCAAATCAGGTCTGACTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR GCA 72 bp CCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCTCTCAGTCTTCTTGAG +
Preference number: 3 (lower is better)
Translates to: PDDEVDLLRVGA*LGILEALSLLE
Trigger: CTCAAGAAGACTGAGAGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR CAA 90 bp TGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAATGACTTTGTCTACATGATGTaGAGAGCCTTCTATGTGGCA +
Preference number: 3 (lower is better)
Translates to: CVLLHEQVPGIDLVDHNDFVYMM*RAFYVA
Trigger: TGCCACATAGAAGGCTCTCAACATCATGTAGACAAA...GTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR TCA 72 bp GTGGCAGATCTGGACGCTCTGGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACCAGATGTTTGCTTCAG +
Preference number: 3 (lower is better)
Translates to: VADLDALGVRQG*NVDLGTRCLLQ
Trigger: CTGAAGCAAACATCTGGTGCCAAGATCTACATTTCAACCCTGCCTTACACCCAGAGCGTCCAGATCTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR GCA 72 bp CCCTCTCAAGCAAGCAACATACATCCCTGGCCTGTCTaGCAGTTTGTTTGGTTTTTGCCGGGGAAGGAGATA +
Preference number: 3 (lower is better)
Translates to: PSQASNIHPWPV*QFVWFLPGKEI
Trigger: TATCTCCTTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTGAGAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CAA 90 bp TCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTCTGACAGTGAGGTTCAGCTCTTaGAACTTCTTCCCAATCAAG +
Preference number: 3 (lower is better)
Translates to: SSRSWRHLLPVKTGHRLTVRFSS*NFFPIK
Trigger: CTTGATTGGGAAGAAGTTCAAAGAGCTGAACCTCAC...TGTCAGACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR CAA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCCATAAGCCAGCTGGCTaGTTAAACACTATCCTTTGG +
Preference number: 3 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFHKPAG*LNTILW
Trigger: CCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATG...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CAA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATATGTCTGCCAGTTTGTTaGGTTTTTGCCGGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFICLPVC*VFAGEG
Trigger: TCCTTCCCCGGCAAAAACCAAACAAACTGGCAGACA...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR GCA 72 bp ATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTAAGTGCTTTGGCACCT +
Preference number: 3 (lower is better)
Translates to: MFASENSHSAPA*QLADRLSALAP
Trigger: AGGTGCCAAAGCACTTAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
3UTR-3UTR CAA 90 bp ACTGGTCATCGTCTGACAGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTTGGAGAGGACAATGTTaGTTATTCCGATGTTCATCT +
Preference number: 3 (lower is better)
Translates to: TGHRLTGASHCPEGLLLPWRGQC*LFRCSS
Trigger: AGATGAACATCGGAATAACAAACATTGTCCTCTCCA...AGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCTGTCAGACGATGACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR CAA 90 bp GAATCAGAGGAAGACCAGTTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGGTTAAACACTATCCTTaGGCTTTGCGAAGAGAACCC +
Preference number: 3 (lower is better)
Translates to: ESEEDQLDCNLSPEQAVLVKHYP*ALRREP
Trigger: GGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAAC...CAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
3UTR-3UTR CAA 90 bp CAAGCAAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGTTAAACACTATCCTTaGGCTTTGCGAAGAGAACCC +
Preference number: 3 (lower is better)
Translates to: QASNIHPWPVCQFVWFLPVKHYP*ALRREP
Trigger: GGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAAC...CGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CAA 90 bp AAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGACACTATCCTTTGGCTTaGCGAAGAGAACCCATAGTT +
Preference number: 3 (lower is better)
Translates to: KSSQITVSTIQSPVQCAGHYPLA*RREPIV
Trigger: AACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTG...TCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CAA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCTGTCTGCCAGTTTGTTaGGTTTTTGCCGGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPCLPVC*VFAGEG
Trigger: TCCTTCCCCGGCAAAAACCAAACAAACTGGCAGACA...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CAA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTTAAACACTATCCTTaGGCTTTGCGAAGAGAACCC +
Preference number: 3 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPVKHYP*ALRREP
Trigger: GGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAAC...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR CCA 72 bp TGCAGAGTTTACTTCTACCTACAGGTGACATGTGGCTaGAAGAATCTTGAGTTCCCTTTGTTCTCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: CRVYFYLQVTCG*KNLEFPLFSSV
Trigger: TACACTGGAGAACAAAGGGAACTCAAGATTCTTCCAGCCACATGTCACCTGTAGGTAGAAGTAAACTCTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CAA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGGAGAGGACAATGTTaGTTATTCCGATGTTCATCT +
Preference number: 3 (lower is better)
Translates to: TAENQHKPAGLLNTILWLWRGQC*LFRCSS
Trigger: AGATGAACATCGGAATAACAAACATTGTCCTCTCCA...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR TCA 72 bp CTTCTACCTACAGGTGACATGTGGCTGGAAGAATCTTaGGTTCCCTTTGTTCTCCAGTGTATCTTGTACAAA +
Preference number: 3 (lower is better)
Translates to: LLPTGDMWLEES*VPFVLQCILYK
Trigger: TTTGTACAAGATACACTGGAGAACAAAGGGAACTCAAGATTCTTCCAGCCACATGTCACCTGTAGGTAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR-3UTR CAA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCCTTGGCACCAGATGTTaGCTTCAGAAAACTCACATA +
Preference number: 3 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPLGTRC*LQKTHI
Trigger: TATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAG...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481416.5
3UTR-3UTR CAA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCATGTTCATCTTTGACTaGAGTGCCAAGCCCAATTTC +
Preference number: 3 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPMFIFD*SAKPNF
Trigger: GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACAT...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR TCA 72 bp GGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAATTTCAACAGTGCAAA +
Preference number: 3 (lower is better)
Translates to: GEDNVCYSDVHL*LECQAQFQQCK
Trigger: TTTGCACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CAA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGATGTTCATCTTTGACTaGAGTGCCAAGCCCAATTTC +
Preference number: 3 (lower is better)
Translates to: FSIGLQYGERKDFLERTMMFIFD*SAKPNF
Trigger: GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACAT...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CAA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTTAAACACTATCCTTaGGCTTTGCGAAGAGAACCC +
Preference number: 3 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGVKHYP*ALRREP
Trigger: GGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAAC...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CAA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGATGTTCATCTTTGACTaGAGTGCCAAGCCCAATTTC +
Preference number: 3 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEMFIFD*SAKPNF
Trigger: GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACAT...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CAA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCATGTTCATCTTTGACTaGAGTGCCAAGCCCAATTTC +
Preference number: 3 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFMFIFD*SAKPNF
Trigger: GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACAT...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CAA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTTGGAGAGGACAATGTTaGTTATTCCGATGTTCATCT +
Preference number: 3 (lower is better)
Translates to: LVKHYPLALRREPIVPSFWRGQC*LFRCSS
Trigger: AGATGAACATCGGAATAACAAACATTGTCCTCTCCA...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CAA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTGGAGAGGACAATGTTaGTTATTCCGATGTTCATCT +
Preference number: 3 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEWRGQC*LFRCSS
Trigger: AGATGAACATCGGAATAACAAACATTGTCCTCTCCA...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
3UTR-3UTR CAA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTGGAGAGGACAATGTTaGTTATTCCGATGTTCATCT +
Preference number: 3 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFWRGQC*LFRCSS
Trigger: AGATGAACATCGGAATAACAAACATTGTCCTCTCCA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp AGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGGTCTGCGACTGGGGGTaGTGGCGCCGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: SAWKVGCVCCCTNRCPALVCDWG*WRRIVL
Trigger: AAGGACGATGCGGCGCCAGCACCCCCAGTCGCAGAC...CAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp CTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGACTGGCAGTGGCGGGGTaGTGGCCTTGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVDHNDLHGDAIRQHEPGLAVAG*WPCPWG
Trigger: GCCCCAGGGACAAGGCCATCACCCCGCCACTGCCAG...TCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp TGCTGGTCGAGGCTGCGCAGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGCTAAAGAGGCCAGGCTaGGGCCCTTGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CWSRLRSAWKVGCVCCCTLKRPG*GPCCSP
Trigger: TGGAGAACAGCAAGGGCCCCAGCCTGGCCTCTTTAG...CGTGCAGCAGCACACACACCCTACCTTCCACGCGCTGCGCAGCCTCGACCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACATGCGACTGGGGGTGCTaGCGCCGCATCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTCDWGC*RRIVLC
Trigger: GCAAAGGACGATGCGGCGCCAGCACCCCCAGTCGCA...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCCAGAGGTACATCTGCTaGTCGAGGCTGCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: AWKVGCVCCCTNRCPALTQRYIC*SRLRSA
Trigger: CGCGCTGCGCAGCCTCGACCAGCAGATGTACCTCTG...GGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR TCA 90 bp GCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCCCCCACCACCTGGGATaGGCTGCTCTTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: AWKVGCVCCCTNRCPALTPHHLG*AALPLI
Trigger: GATAAGGGGAAGAGCAGCTCATCCCAGGTGGTGGGG...GGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp ACTGGTCATCGTCTGACAGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTCTGGCAGTGGCGGGGTaGTGGCCTTGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TGHRLTGASHCPEGLLLPLAVAG*WPCPWG
Trigger: GCCCCAGGGACAAGGCCATCACCCCGCCACTGCCAG...AGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCTGTCAGACGATGACCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp TCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTCTGACAGGGGCAAGCCACAGGGGCCCTaGCCAGAGGGGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SLMAASASGENWSSSDRGKPQGP*PEGPRA
Trigger: TGCTCTTGGCCCCTCTGGCCAGGGCCCCTGTGGCTT...GCCCCTGTCAGACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp AGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGCCATGGCTCAGGTGTTaGTCCCAGCCCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: SAWKVGCVCCCTNRCPALPWLRC*SQPSLS
Trigger: ACTGAGGCTGGGCTGGGACCAACACCTGAGCCATGG...CAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp GTTGAGAGCCTTCTATGTGGCAGATCTGGACGCTCTGGGTGTAAGGCAGGGTTGCTGGGCTTTGGCGTCTaGGACTGGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: VESLLCGRSGRSGCKAGLLGFGV*DWGCWR
Trigger: GCGCCAGCACCCCCAGTCGCAGACGCCAAAGCCCAG...CAACCCTGCCTTACACCCAGAGCGTCCAGATCTGCCACATAGAAGGCTCTCAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGGCAACAGCTGCCTCTaGTGTGGCAGGCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: EGRVCVLLHEQVPGIDLVGNSCL*CGRLRS
Trigger: ACTGCGGAGCCTGCCACAGCAGAGGCAGCTGTTGCC...AACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGGCVCC*TNRCPA
Trigger: TGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTVGCVC*CTNRCP
Trigger: CGGGCACCTGTTCGTGCAGCAGCACACACACCCTAC...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCCAGCTGCCTCTGCTGTaGCAGGCTCCGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGQLPLL*QAPQCL
Trigger: CAGACACTGCGGAGCCTGCCACAGCAGAGGCAGCTG...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCCCGGCAACTCTTCACTaGGGGTGGTCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGPATLH*GWSVPG
Trigger: GCCTGGCACTGACCACCCCCAGTGAAGAGTTGCCGG...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGGCACCAGCCTCCACCTaGTGCTCATCATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DAIRQHEPGCHRQRRQCQAPAST*CSSWLL
Trigger: CAGCAGCCATGATGAGCAGCAGGTGGAGGCTGGTGC...CTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCCTGGGCTTTGGCGTCTaGGACTGGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFLGFGV*DWGCWR
Trigger: GCGCCAGCACCCCCAGTCGCAGACGCCAAAGCCCAG...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTCACGACCTGCAACCTTaGCAACCGTGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: EGRVCVLLHEQVPGIDLVHDLQP*QPWWPA
Trigger: TGCTGGCCACCACGGTTGGCAAGGTTGCAGGTCGTG...AACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAAGGCCTCGCTCCACATCTTCCACCAGGATaGCTGCCCGGTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: GVKGLCSSCLPTGQGLAPHLPPG*LPGPAT
Trigger: AGTTGCCGGACCGGGCAGGCATCCTGGTGGAAGATG...TGGAGCGAGGCCTTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACACTAAAGAGGCCAGGCTaGGGCCCTTGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTLKRPG*GPCCSP
Trigger: TGGAGAACAGCAAGGGCCCCAGCCTGGCCTCTTTAG...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AAGGCCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACTTTGGCGTCTGCGACTaGGGGTGCTGGCGCCGCATC +
Preference number: 4 (lower is better)
Translates to: KASLHQGPVYQHHFISNHFGVCD*GCWRRI
Trigger: GATGCGGCGCCAGCACCCCCAGTCGCAGACGCCAAA...GTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp GAGGTACATCTGCTGGTCGAGGCTGCGCAGCGCGTGGAAGGTAGGGTGTGTGTGTCGACACCTCTATCCTaGGCTTTGGCGTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: EVHLLVEAAQRVEGRVCVSTPLS*ALASAT
Trigger: AGTCGCAGACGCCAAAGCCCAGGATAGAGGTGTCGA...CACACACACCCTACCTTCCACGCGCTGCGCAGCCTCGACCAGCAGATGTACCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCGCCCTTGGAGCTGACTaGCCTGACACACACGACCTG +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGALGAD*PDTHDL
Trigger: CAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGC...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGACAGCTGCCTCTGCTGTaGCAGGCTCCGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVDHNDLHGDAIRQHEPGQLPLL*QAPQCL
Trigger: CAGACACTGCGGAGCCTGCCACAGCAGAGGCAGCTG...TCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGGCTTCCGGTGAAAACTaGTCATCGTCTGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: SAWKVGCVCCCTNRCPALASGEN*SSSDRG
Trigger: GCCCCTGTCAGACGATGACCAGTTTTCACCGGAAGC...CAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp GGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAAGGCCTCGCTCCACCGTCATCTCGCTCATaGCGGCATCTGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: GVKGLCSSCLPTGQGLAPPSSRS*RHLLPV
Trigger: CACCGGAAGCAGATGCCGCCATGAGCGAGATGACGG...TGGAGCGAGGCCTTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
3UTR CAA 72 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATaGACCTGGTTGACCACAATGACCTCCACGGTGATG +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPA*TWLTTMTSTVM
Trigger: CATCACCGTGGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGAATGCCCGAGGACTCTaGTCTTCGGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: DAIRQHEPGCHRQRRQCQNARGL*SSARWV
Trigger: CACCCACCTTGCCGAAGATCAGAGTCCTCGGGCATT...CTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGTGAACAATGCTGGGGGCTCTaGAGGCAGCTTGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: PSGSMSQDVIGREGSASEQCWGL*RQLAHG
Trigger: ACCGTGAGCAAGCTGCCTGCAGAGCCCCCAGCATTG...TTCACTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAATGACAGAGCTACGCTTCTCTaGGGGGACTACGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: CVLLHEQVPGIDLVDHNDRATLL*GDYGVA
Trigger: GGCTACCCCGTAGTCCCCGCAGAGAAGCGTAGCTCT...GTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAATGACCGCCGCATCGTCCTTTaGCAGCTCTGTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: CVLLHEQVPGIDLVDHNDRRIVL*QLCVSR
Trigger: TCGGCTCACACAGAGCTGGCAAAGGACGATGCGGCG...GTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GTTGAGAGCCTTCTATGTGGCAGATCTGGACGCTCTGGGTGTAAGGCAGGGTTGGGCAACAGCTGCCTCTaGTGTGGCAGGCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: VESLLCGRSGRSGCKAGLGNSCL*CGRLRS
Trigger: ACTGCGGAGCCTGCCACAGCAGAGGCAGCTGTTGCC...CAACCCTGCCTTACACCCAGAGCGTCCAGATCTGCCACATAGAAGGCTCTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp AGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAAGCCGGCGGGGCAACAGCTaGCTCTGCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SSQITVSTIQSPVQCAGSRRGNS*LCCGRL
Trigger: GAGCCTGCCACAGCAGAGGCAGCTGTTGCCCCGCCG...GCTTCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTCCACCAGGATGCCTaGCCGGTCCGGCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SISQMMRSTFLGLEPAWAFHQDA*PVRQLF
Trigger: GAAGAGTTGCCGGACCGGGCAGGCATCCTGGTGGAA...TGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGTGAACATCTTCCACCAGGATaGCTGCCCGGTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: PSGSMSQDVIGREGSASEHLPPG*LPGPAT
Trigger: AGTTGCCGGACCGGGCAGGCATCCTGGTGGAAGATG...TTCACTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTTGGGTCACCTGTCCAGTGTaGAGGAAGCCACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: SQMMRSTFLGLEPAWAFWVTCPV*RKPQGP
Trigger: GGGCCCCTGTGGCTTCCTGCACACTGGACAGGTGAC...CCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CAGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTGAAACGGCAGGGTGACCAAGGTGGGTGTGTCTaGAGCAATGCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QGHHTVQKDFCSLKRQGDQGGCV*SNAGGS
Trigger: AGAGCCCCCAGCATTGCTCCAGACACACCCACCTTG...GTCACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGTGAATGGCTGGACCTTCCTTaGCACCCTGCTGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: PSGSMSQDVIGREGSASEWLDLP*HPAEGG
Trigger: TCCCCCTTCAGCAGGGTGCCAAGGAAGGTCCAGCCA...TTCACTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGGACTACGGGGTAGCCTaGCTGGACCTTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: NDLHGDAIRQHEPGCHRQDYGVA*LDLPWH
Trigger: GTGCCAAGGAAGGTCCAGCCAGGCTACCCCGTAGTC...CTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp TCTCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGTGCGACTGGGGGTGCTaGCGCCGCATCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SQEAAWGSKACVVAVYPLCDWGC*RRIVLC
Trigger: GCAAAGGACGATGCGGCGCCAGCACCCCCAGTCGCA...CAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGTGAAGGGCACAGTACTTTCTaGCAGTGGCGGGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: PSGSMSQDVIGREGSASEGHSTF*QWRGDG
Trigger: GCCATCACCCCGCCACTGCCAGAAAGTACTGTGCCC...TTCACTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCCGGGCGAGCCGAGGGTaGGAAGTTGGGCGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCRASRG*EVGRGS
Trigger: GGAGCCTCGCCCAACTTCTCACCCTCGGCTCGCCCG...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR GCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCCCAAGCTCTCCTCATTaGCCAGTTCTCCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGPSSPH*PVLPRH
Trigger: GTGTCGAGGGAGAACTGGGCAATGAGGAGAGCTTGG...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGCTGACACACACGACCTaGAACCTTGCCAACCGTGGT +
Preference number: 4 (lower is better)
Translates to: DAIRQHEPGCHRQRRQCQLTHTT*NLANRG
Trigger: ACCACGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAG...CTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACGGCAACAGCTGCCTCTaGTGTGGCAGGCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDGNSCL*CGRLRS
Trigger: ACTGCGGAGCCTGCCACAGCAGAGGCAGCTGTTGCC...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTGGGCATTTTGGAAGCTCTCAGTCTTCTTGAGACTGCAACAGCTATCCACGGACGGCGGGGCAACAGCTaGCTCTGCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LGILEALSLLETATAIHGRRGNS*LCCGRL
Trigger: GAGCCTGCCACAGCAGAGGCAGCTGTTGCCCCGCCG...TCCGTGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCTTCCAAAATGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTCATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 4 (lower is better)
Translates to: EGRVCVLLHEQVPGIDLVHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...AACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp ACTGGTCATCGTCTGACAGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TGHRLTGASHCPEGLLLPVGCVC*CTNRCP
Trigger: CGGGCACCTGTTCGTGCAGCAGCACACACACCCTAC...AGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCTGTCAGACGATGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAGTGTGGACACTACTTTaGGACAGACGTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTVWTLL*DRRLPR
Trigger: CCGTGGAAGACGTCTGTCCCAAAGTAGTGTCCACAC...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GTGCTGTATTCCCCGTCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGACTACGGGGTAGCCTaGCTGGACCTTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: VLYSPSSRSWRHLLPVKTDYGVA*LDLPWH
Trigger: GTGCCAAGGAAGGTCCAGCCAGGCTACCCCGTAGTC...AGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAATACAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACACTCGCCCTTGGAGCTGACTaGCCTGACACACACGACCTG +
Preference number: 4 (lower is better)
Translates to: PRSTRDRFINTTSSPTTLALGAD*PDTHDL
Trigger: CAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGC...GAGTGTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp TGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAATGACCCCTGGGGCTCGAGCTaGTCTCTGTGCAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CVLLHEQVPGIDLVDHNDPWGSS*SLCKSL
Trigger: AAGACTCTTGCACAGAGACCAGCTCGAGCCCCAGGG...GTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTAGTACTTTCTGGCAGTaGCGGGGTGATGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: EGRVCVLLHEQVPGIDLVSTFWQ*RGDGLV
Trigger: GACAAGGCCATCACCCCGCCACTGCCAGAAAGTACT...AACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGCTGCTTCCGCATCCATaGTCCATCCATCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: NDLHGDAIRQHEPGCHRQLLPHP*SIHPQP
Trigger: GGGCTGAGGATGGATGGACCATGGATGCGGAAGCAG...CTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGCTGAACTGTCTACGCTaGGGTCAGCACTCGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SAWKVGCVCCCTNRCPALLNCLR*GQHSKN
Trigger: GTTTTTCGAGTGCTGACCCCAGCGTAGACAGTTCAG...CAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCCAGAGGTACATCTGCTaGTCGAGGCTGCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFQRYIC*SRLRSA
Trigger: CGCGCTGCGCAGCCTCGACCAGCAGATGTACCTCTG...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp GTGCTGTATTCCCCGTCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTAATGCCCGAGGACTCTaGTCTTCGGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLYSPSSRSWRHLLPVKTNARGL*SSARWV
Trigger: CACCCACCTTGCCGAAGATCAGAGTCCTCGGGCATT...AGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAATACAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR TCA 90 bp GCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCAAGACAGTTTTCTGGTaGACTGGGACACAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AWKVGCVCCCTNRCPALTKTVFW*TGTQLS
Trigger: AGAGAGCTGTGTCCCAGTTCACCAGAAAACTGTCTT...GGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAAGGCCTCGCTCCAACTTTGGCTGCTGTCTaGCATGCAGGTGACACAGGT +
Preference number: 4 (lower is better)
Translates to: GVKGLCSSCLPTGQGLAPTLAAV*HAGDTG
Trigger: ACCTGTGTCACCTGCATGTCAGACAGCAGCCAAAGT...TGGAGCGAGGCCTTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGCTGGCAGTGGCGGGGTaGTGGCCTTGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQLAVAG*WPCPWG
Trigger: GCCCCAGGGACAAGGCCATCACCCCGCCACTGCCAG...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTCTCAGCCCCCAAGTCTaGCAACTCCCCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: ISQMMRSTFLGLEPAWAFLSPQV*QLPLQH
Trigger: GTGCTGAAGGGGGAGTTGTCAGACTTGGGGGCTGAG...AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCTGTAAGTTAGCGGTCTaGACTGTCTACGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGCKLAV*TVYAGV
Trigger: GACCCCAGCGTAGACAGTTCAGACCGCTAACTTACA...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TCTCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGCACCAGCCTCCACCTaGTGCTCATCATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SQEAAWGSKACVVAVYPLAPAST*CSSWLL
Trigger: CAGCAGCCATGATGAGCAGCAGGTGGAGGCTGGTGC...CAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp ATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTCCCACCTGTCTCTCTTaGCCTCTCCCCAGAGCTACG +
Preference number: 4 (lower is better)
Translates to: ISQMMRSTFLGLEPAWAFPTCLS*PLPRAT
Trigger: CGTAGCTCTGGGGAGAGGGCAAGAGAGACAGGTGGG...AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGACCAGGCTGGGGCCCTTaGTGTTCTCCAATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LVDHNDLHGDAIRQHEPGPGWGP*CSPIPR
Trigger: TCTTGGAATTGGAGAACAGCAAGGGCCCCAGCCTGG...TCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACACCACCTGGGATGAGCTaGTCTTCCCCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTPPGMS*SSPYLL
Trigger: AAGAAGATAAGGGGAAGAGCAGCTCATCCCAGGTGG...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GGCATTGACCTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATACATACTCTTCCTCCTaGACTGGCCCCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: GIDLVDHNDLHGDAIRQHTYSSS*TGPTTW
Trigger: CCAGGTGGTGGGGCCAGTGCAGGAGGAAGAGTATGT...ATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAGGTCAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACCATCTTCCACCAGGATaGCTGCCCGGTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDHLPPG*LPGPAT
Trigger: AGTTGCCGGACCGGGCAGGCATCCTGGTGGAAGATG...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCCTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGLRVGA*LGILEA
Trigger: AGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAG...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GTTGAGAGCCTTCTATGTGGCAGATCTGGACGCTCTGGGTGTAAGGCAGGGTTGTGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VESLLCGRSGRSGCKAGLCCTNR*PALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCA...CAACCCTGCCTTACACCCAGAGCGTCCAGATCTGCCACATAGAAGGCTCTCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAATGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: GSSMGVKGLCSSCLPTGQCCTNR*PALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCA...TTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR GCA 90 bp AATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGC +
Preference number: 4 (lower is better)
Translates to: NDLHGDAIRQHEPGCHRQKVGCV*CCTNRC
Trigger: GCACCTGTTCGTGCAGCAGCACACACACCCTACCTT...CTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCGTCCAGAAGGACTTCTaGTCCCTGAAACGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: QEAAWGSKACVVAVYPLGVQKDF*SLKRQG
Trigger: ACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGAC...GCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGGCAGCTTGCTCACGGTaGACAGTTCCTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: DAIRQHEPGCHRQRRQCQAACSR*TVPFLE
Trigger: CTCCAGAAAAGGAACTGTCCACCGTGAGCAAGCTGC...CTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTTGGAAGCTCTCCAAGGTGGGTGTGTCTaGAGCAATGCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: DEVDLLRVGACLGILEALQGGCV*SNAGGS
Trigger: AGAGCCCCCAGCATTGCTCCAGACACACCCACCTTG...GAGAGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CAAGCAAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGTGCGACTGGGGGTGCTaGCGCCGCATCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: QASNIHPWPVCQFVWFLPCDWGC*RRIVLC
Trigger: GCAAAGGACGATGCGGCGCCAGCACCCCCAGTCGCA...CGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTCAACCTTGCCAACCGTaGTGGCCAGCACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: ISQMMRSTFLGLEPAWAFQPCQP*WPAPVR
Trigger: CCGAACAGGTGCTGGCCACCACGGTTGGCAAGGTTG...AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCCAACCTTGCCAACCGTaGTGGCCAGCACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFQPCQP*WPAPVR
Trigger: CCGAACAGGTGCTGGCCACCACGGTTGGCAAGGTTG...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACTGGTCATCGTCTGACAGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTTGTCCTTGGTGGGGCTaGACAGAAGGCTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: TGHRLTGASHCPEGLLLPCPWWG*TEGSSG
Trigger: GCCTGAAGAGCCTTCTGTCCAGCCCCACCAAGGACA...AGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCTGTCAGACGATGACCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp AATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGTTGGCTTACTGTCCTTaGTGGGGCTGGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: NDLHGDAIRQHEPGCHRQLAYCP*WGWTEG
Trigger: GCCTTCTGTCCAGCCCCACCAAGGACAGTAAGCCAA...CTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAACCAAAGGGACACTTTaGCTGCTGTCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTTKGTL*LLSDMQ
Trigger: CTGCATGTCAGACAGCAGCCAAAGTGTCCCTTTGGT...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAGTACTTTCTGGCAGTaGCGGGGTGATGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: QEAAWGSKACVVAVYPLGSTFWQ*RGDGLV
Trigger: GACAAGGCCATCACCCCGCCACTGCCAGAAAGTACT...GCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp TCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCTGCTTCCGCATCCATaGTCCATCCATCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: SGSSMGVKGLCSSCLPTGLLPHP*SIHPQP
Trigger: GGGCTGAGGATGGATGGACCATGGATGCGGAAGCAG...CCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCCTGGGGTGGGCAAGGTaGGGATTCCAGGCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFLGWAR*GFQAES
Trigger: ACTCTCAGCCTGGAATCCCCACCTTGCCCACCCCAG...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTCTGACACCGTCATCTCGCTCATaGCGGCATCTGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: SSRSWRHLLPVKTGHRLTPSSRS*RHLLPV
Trigger: CACCGGAAGCAGATGCCGCCATGAGCGAGATGACGG...TGTCAGACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCTGTGAGCCGACTCGATaGACCTACTTGGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGCEPTR*TYLATS
Trigger: AGAAGTTGCCAAGTAGGTTCATCGAGTCGGCTCACA...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp AATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGTTTGCCAGCTCTGTGTaGGCCGACTCGATGAACCTA +
Preference number: 4 (lower is better)
Translates to: NDLHGDAIRQHEPGCHRQFASSV*ADSMNL
Trigger: TAGGTTCATCGAGTCGGCTCACACAGAGCTGGCAAA...CTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp CCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGTGAAACTTTGGCTGCTGTCTaGCATGCAGGTGACACAGGT +
Preference number: 4 (lower is better)
Translates to: PSGSMSQDVIGREGSASETLAAV*HAGDTG
Trigger: ACCTGTGTCACCTGCATGTCAGACAGCAGCCAAAGT...TTCACTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp TGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAATGACGCTGCAACTCCTGAATaGTCTGCTTCCGCATCCATG +
Preference number: 4 (lower is better)
Translates to: CVLLHEQVPGIDLVDHNDAATPE*SASASM
Trigger: CATGGATGCGGAAGCAGATCATTCAGGAGTTGCAGC...GTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CAGCGCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGAAGTAATTACACCTTaGTGGGTAGTGCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: QRVEGRVCVLLHEQVPGIEVITP*WVVLGS
Trigger: AGAACCGAGCACTACCCAGCAAGGTGTAATTACTTC...AATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp AACTCACATAGCGCCCCTGCTTGCCAATTAGCCGACCGACTAAGTGCTTTGGCAGCTCTGCAGGCAGCTTaGTCACGGTGGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: NSHSAPACQLADRLSALAALQAA*SRWTVP
Trigger: AGGAACTGTCCACCGTGAGCAAGCTGCCTGCAGAGC...TGCCAAAGCACTTAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATGTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp AGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAAGCAGAGCTACGCTTCTCTaGGGGGACTACGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSQITVSTIQSPVQCAGSRATLL*GDYGVA
Trigger: GGCTACCCCGTAGTCCCCGCAGAGAAGCGTAGCTCT...GCTTCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GGCATTGACCTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATCCAGGCTGGGGCCCTTaGTGTTCTCCAATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GIDLVDHNDLHGDAIRQHPGWGP*CSPIPR
Trigger: TCTTGGAATTGGAGAACAGCAAGGGCCCCAGCCTGG...ATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAGGTCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCGTCTGCGACTGGGGGTaGTGGCGCCGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCVCDWG*WRRIVL
Trigger: AAGGACGATGCGGCGCCAGCACCCCCAGTCGCAGAC...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCGGCGGGGCAACAGCTaGCTCTGCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLRRGNS*LCCGRL
Trigger: GAGCCTGCCACAGCAGAGGCAGCTGTTGCCCCGCCG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAAGCTTCCACCAGGATGCCTaGCCGGTCCGGCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SSQITVSTIQSPVQCAGSFHQDA*PVRQLF
Trigger: GAAGAGTTGCCGGACCGGGCAGGCATCCTGGTGGAA...GCTTCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTCACATCTTCCACCAGGATaGCTGCCCGGTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: DCNLSPEQAVLYSPSSRSHLPPG*LPGPAT
Trigger: AGTTGCCGGACCGGGCAGGCATCCTGGTGGAAGATG...TGAGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR GCA 90 bp AATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGTCGAGCTGGTCTCTGTaGAAGAGTCTTCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: NDLHGDAIRQHEPGCHRQSSWSL*KSLQAL
Trigger: CAGGGCTTGAAGACTCTTGCACAGAGACCAGCTCGA...CTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp AACTCACATAGCGCCCCTGCTTGCCAATTAGCCGACCGACTAAGTGCTTTGGCAACCTCGTTATCAAAGTaGCCCGCTTTCCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: NSHSAPACQLADRLSALATSLSK*PAFPGV
Trigger: CACCCCCGGGAAAGCGGGGCACTTTGATAACGAGGT...TGCCAAAGCACTTAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATGTGAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TCTCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGACCTCGTTATCAAAGTaGCCCGCTTTCCCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SQEAAWGSKACVVAVYPLTSLSK*PAFPGV
Trigger: CACCCCCGGGAAAGCGGGGCACTTTGATAACGAGGT...CAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp TCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 4 (lower is better)
Translates to: SGSSMGVKGLCSSCLPTGHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...CCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR GCA 90 bp CTGGGCATTTTGGAAGCTCTCAGTCTTCTTGAGACTGCAACAGCTATCCACGGAGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LGILEALSLLETATAIHGGCVCC*TNRCPA
Trigger: TGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC...TCCGTGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCTTCCAAAATGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CTGAATCAGAGGAAGACCAGTTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LNQRKTSWTVTCHLSKQCGCVCC*TNRCPA
Trigger: TGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC...GCACTGCTTGCTCAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTGATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR GCA 90 bp AAGGCCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACGTCCAGAAGGACTTCTaGTCCCTGAAACGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: KASLHQGPVYQHHFISNHVQKDF*SLKRQG
Trigger: ACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGAC...GTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR GCA 90 bp ATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTGGCCAGGAATCAGAGTaGTGGAGCCATGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: ISQMMRSTFLGLEPAWAFGQESE*WSHGSG
Trigger: ACCTGAGCCATGGCTCCAGCACTCTGATTCCTGGCC...AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGAAAGAGCGAACGGAACTaGATTGCCATCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVDHNDLHGDAIRQHEPGKSERN*IAILEA
Trigger: AGCCTCCAGGATGGCAATCCAGTTCCGTTCGCTCTT...TCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCCTAAAGAGGCCAGGCTaGGGCCCTTGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFLKRPG*GPCCSP
Trigger: TGGAGAACAGCAAGGGCCCCAGCCTGGCCTCTTTAG...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCAGAACCTGTAAGTTTTGGCGTCTGCGACTaGGGGTGCTGGCGCCGCATC +
Preference number: 4 (lower is better)
Translates to: RLQQLSTESMLFLSEPVSFGVCD*GCWRRI
Trigger: GATGCGGCGCCAGCACCCCCAGTCGCAGACGCCAAA...ACTTACAGGTTCTGACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGGAGGCCCTTGGAGCTGACTaGCCTGACACACACGACCTG +
Preference number: 4 (lower is better)
Translates to: NIHPWPVCQFVWFLPGKEALGAD*PDTHDL
Trigger: CAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGC...CTCCTTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGGAGGCCAGGGAGATGTaGTGTGCAGAGATATTTGGC +
Preference number: 4 (lower is better)
Translates to: NDLHGDAIRQHEPGCHRQEAREM*CAEIFG
Trigger: GCCAAATATCTCTGCACACCACATCTCCCTGGCCTC...CTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTCAACTCTTCACTGGGGGTaGTCAGTGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: DCNLSPEQAVLYSPSSRSTLHWG*SVPGRR
Trigger: CCTCCTGCCTGGCACTGACCACCCCCAGTGAAGAGT...TGAGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp CTCAGTCTTCTTGAGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCCCGGCAACTCTTCACTaGGGGTGGTCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSLLETATAIHGIHAVPVPATLH*GWSVPG
Trigger: GCCTGGCACTGACCACCCCCAGTGAAGAGTTGCCGG...GACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCTCAAGAAGACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp ACTCCACAGCTGAATCAGAGGAAGACCAGTTGGACTGTAACTTGTCACCTGAGCCCGGCAACTCTTCACTaGGGGTGGTCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: TPQLNQRKTSWTVTCHLSPATLH*GWSVPG
Trigger: GCCTGGCACTGACCACCCCCAGTGAAGAGTTGCCGG...GCTCAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTGATTCAGCTGTGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATACCGGCAACTCTTCACTaGGGGTGGTCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFIPATLH*GWSVPG
Trigger: GCCTGGCACTGACCACCCCCAGTGAAGAGTTGCCGG...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCTTATTTCCACTGGGGTaGGCAAGGTGGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: QEAAWGSKACVVAVYPLGLFPLG*ARWGFQ
Trigger: CTGGAATCCCCACCTTGCCCACCCCAGTGGAAATAA...GCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp GTGCTGTATTCCCCGTCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGCTTCCGGTGAAAACTaGTCATCGTCTGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLYSPSSRSWRHLLPVKTASGEN*SSSDRG
Trigger: GCCCCTGTCAGACGATGACCAGTTTTCACCGGAAGC...AGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAATACAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACGGGGCTGGGCGACCTTaGGTGGGACGCGCTCGGGTC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDGAGRP*VGRARV
Trigger: GACCCGAGCGCGTCCCACCCAAGGTCGCCCAGCCCC...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAATCTTCCCAGTTCCCCTaGCTCGCCGCACGGAACTCC +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGESSQFP*LAARNS
Trigger: GGAGTTCCGTGCGGCGAGCCAGGGGAACTGGGAAGA...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR TCA 90 bp CTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATGAGCCAGGAGCCATCCTGGAGGCTTaGAGTAATTACACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LVDHNDLHGDAIRQHEPGAILEA*SNYTLL
Trigger: CAGCAAGGTGTAATTACTTCAAGCCTCCAGGATGGC...TCCTGGCTCATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp AGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCAGAACCTGTAAGTCGGGGAGAGGTTCCTTaGTGGCAGGGTCAGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RLQQLSTESMLFLSEPVSRGEVP*WQGQPS
Trigger: TGAGGGCTGACCCTGCCATCAAGGAACCTCTCCCCG...ACTTACAGGTTCTGACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GTTGAGAGCCTTCTATGTGGCAGATCTGGACGCTCTGGGTGTAAGGCAGGGTTGTGTCTGACATGCAGGTaGCACAGGTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: VESLLCGRSGRSGCKAGLCLTCR*HRWHLP
Trigger: TGGAAGATGCCACCTGTGTCACCTGCATGTCAGACA...CAACCCTGCCTTACACCCAGAGCGTCCAGATCTGCCACATAGAAGGCTCTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAATGTCTGACATGCAGGTaGCACAGGTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: GSSMGVKGLCSSCLPTGQCLTCR*HRWHLP
Trigger: TGGAAGATGCCACCTGTGTCACCTGCATGTCAGACA...TTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp GTGCTGTATTCCCCGTCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTTGTCTGACATGCAGGTaGCACAGGTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: VLYSPSSRSWRHLLPVKTCLTCR*HRWHLP
Trigger: TGGAAGATGCCACCTGTGTCACCTGCATGTCAGACA...AGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAATACAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCTGGCAGTGGCGGGGTaGTGGCCTTGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDLAVAG*WPCPWG
Trigger: GCCCCAGGGACAAGGCCATCACCCCGCCACTGCCAG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCTGGCAGTGGCGGGGTaGTGGCCTTGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKLAVAG*WPCPWG
Trigger: GCCCCAGGGACAAGGCCATCACCCCGCCACTGCCAG...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAACTCAGCCCCCAAGTCTaGCAACTCCCCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGELSPQV*QLPLQH
Trigger: GTGCTGAAGGGGGAGTTGTCAGACTTGGGGGCTGAG...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACACTCGCTGCAACTCCTGAATaGTCTGCTTCCGCATCCATG +
Preference number: 4 (lower is better)
Translates to: PRSTRDRFINTTSSPTTLAATPE*SASASM
Trigger: CATGGATGCGGAAGCAGATCATTCAGGAGTTGCAGC...GAGTGTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR TCA 90 bp CCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACACTCTGGAGCTGCAACTCCTaGATGATCTGCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: PRSTRDRFINTTSSPTTLWSCNS*MICFRI
Trigger: GATGCGGAAGCAGATCATTCAGGAGTTGCAGCTCCA...GAGTGTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp GACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTCAGCTCTGCAGGCAGCTTaGTCACGGTGGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: DCNLSPEQAVLYSPSSRSALQAA*SRWTVP
Trigger: AGGAACTGTCCACCGTGAGCAAGCTGCCTGCAGAGC...TGAGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAACAATGCTGGGGGCTCTaGAGGCAGCTTGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEQCWGL*RQLAHG
Trigger: ACCGTGAGCAAGCTGCCTGCAGAGCCCCCAGCATTG...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAACTTGGCAACTTCTCTaGTACATACTCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTTWQLL*YILFLL
Trigger: CAGGAGGAAGAGTATGTAGCAGAGAAGTTGCCAAGT...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCACTGGGCTTTGGCGTCTaGGACTGGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPLGFGV*DWGCWR
Trigger: GCGCCAGCACCCCCAGTCGCAGACGCCAAAGCCCAG...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AACTCACATAGCGCCCCTGCTTGCCAATTAGCCGACCGACTAAGTGCTTTGGCACCAAGCTCTCCTCATTaGCCAGTTCTCCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: NSHSAPACQLADRLSALAPSSPH*PVLPRH
Trigger: GTGTCGAGGGAGAACTGGGCAATGAGGAGAGCTTGG...TGCCAAAGCACTTAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATGTGAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCCTGACACACACGACCTaGAACCTTGCCAACCGTGGT +
Preference number: 4 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFLTHTT*NLANRG
Trigger: ACCACGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAG...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAATCGAGCTGGTCTCTGTaGAAGAGTCTTCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GSSMGVKGLCSSCLPTGQSSWSL*KSLQAL
Trigger: CAGGGCTTGAAGACTCTTGCACAGAGACCAGCTCGA...TTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR GCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATAGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFIVGCVC*CTNRCP
Trigger: CGGGCACCTGTTCGTGCAGCAGCACACACACCCTAC...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TCTCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQEAAWGSKACVVAVYPLKVGCV*CCTNRC
Trigger: GCACCTGTTCGTGCAGCAGCACACACACCCTACCTT...CAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR GCA 90 bp GAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGCCAAGAGCAGAAGCTaGACTGCAGAGTTTACTTCT +
Preference number: 4 (lower is better)
Translates to: EGRVCVLLHEQVPGIDLVAKSRS*TAEFTS
Trigger: AGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGC...AACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp AAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAGGTAGTGCTCGGTTCTaGCACCAAGGGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: KSSQITVSTIQSPVQCAGGSARF*HQGWGR
Trigger: TCGCCCCCACCCTTGGTGGCAGAACCGAGCACTACC...TCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GCGTGGAAGGTAGGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCACTGGATTGCCATCCTaGAGGCTTGAAGTAATTACA +
Preference number: 4 (lower is better)
Translates to: AWKVGCVCCCTNRCPALTTGLPS*RLEVIT
Trigger: TGTAATTACTTCAAGCCTCCAGGATGGCAATCCAGT...GGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCCTACCTTCCACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACACTCGTGTGGACACTACTTTaGGACAGACGTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: PRSTRDRFINTTSSPTTLVWTLL*DRRLPR
Trigger: CCGTGGAAGACGTCTGTCCCAAAGTAGTGTCCACAC...GAGTGTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp TCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTTGGGCAGCTTGCTCACGGTaGACAGTTCCTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQMMRSTFLGLEPAWAFWAACSR*TVPFLE
Trigger: CTCCAGAAAAGGAACTGTCCACCGTGAGCAAGCTGC...CCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGATCTCTGCGTGTTCCTaGTCGCAATCTCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: DAIRQHEPGCHRQRRQCQISACS*SQSHVC
Trigger: ACAGACATGAGATTGCGACCAGGAACACGCAGAGAT...CTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAACAACCTTGCCAACCGTaGTGGCCAGCACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEQPCQP*WPAPVR
Trigger: CCGAACAGGTGCTGGCCACCACGGTTGGCAAGGTTG...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTAGGCTCCGCAGTGTCTaGGCCCAAGACAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: ISQMMRSTFLGLEPAWAFRLRSV*AQDSFL
Trigger: CAGAAAACTGTCTTGGGCCCAGACACTGCGGAGCCT...AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTCATGTCCTTGGTGGGGCTaGACAGAAGGCTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: DCNLSPEQAVLYSPSSRSCPWWG*TEGSSG
Trigger: GCCTGAAGAGCCTTCTGTCCAGCCCCACCAAGGACA...TGAGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GATGCCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGGTGTGCAGAGATATTTaGCTTACTGTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: DAIRQHEPGCHRQRRQCQVCRDI*LTVLGG
Trigger: CCCACCAAGGACAGTAAGCCAAATATCTCTGCACAC...CTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCCAATACTCTTCACTGGGGGTaGTCAGTGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LGTRCLLQKTHIAPLLANTLHWG*SVPGRR
Trigger: CCTCCTGCCTGGCACTGACCACCCCCAGTGAAGAGT...ATTGGCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGGGCACAGTACTTTCTaGCAGTGGCGGGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEGHSTF*QWRGDG
Trigger: GCCATCACCCCGCCACTGCCAGAAAGTACTGTGCCC...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGAATCAGAGGAAGACCAGTTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCGGGCACAGTACTTTCTaGCAGTGGCGGGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: LNQRKTSWTVTCHLSKQCGHSTF*QWRGDG
Trigger: GCCATCACCCCGCCACTGCCAGAAAGTACTGTGCCC...GCACTGCTTGCTCAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTGATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCAGGCTGCGCAGCGCGTaGAAGGTAGGGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCRLRSA*KVGCVC
Trigger: GCACACACACCCTACCTTCCACGCGCTGCGCAGCCT...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCTGGGCGACCTTGGGTaGGACGCGCTCGGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKLGDLG*DALGSA
Trigger: GGCTGACCCGAGCGCGTCCCACCCAAGGTCGCCCAG...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621116.4
3UTR CAA 72 bp AAAAGACTCTCAGGAAGCAGCATGGGGGTCAAAGGCTaGTGTAGTAGCTGTCTACCCACTGGGCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KRLSGSSMGVKG*CSSCLPTGQGL
Trigger: GAGGCCTTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGAGTCTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp AGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCAGAACCTGTAAGTCCCCACCACCTGGGATaGGCTGCTCTTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: RLQQLSTESMLFLSEPVSPHHLG*AALPLI
Trigger: GATAAGGGGAAGAGCAGCTCATCCCAGGTGGTGGGG...ACTTACAGGTTCTGACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACTGTCTGACATGCAGGTaGCACAGGTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDCLTCR*HRWHLP
Trigger: TGGAAGATGCCACCTGTGTCACCTGCATGTCAGACA...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTTGGAGTGCTGAAAGAATCTaGGCAGTGTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SQMMRSTFLGLEPAWAFWSAERI*AVSWRS
Trigger: GCTTCTCCAGGACACTGCTCAGATTCTTTCAGCACT...CCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp TCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGAGTGCTGAAAGAATCTaGGCAGTGTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SGSSMGVKGLCSSCLPTGSAERI*AVSWRS
Trigger: GCTTCTCCAGGACACTGCTCAGATTCTTTCAGCACT...CCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCTGGCAGTGGCGGGGTaGTGGCCTTGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNLAVAG*WPCPWG
Trigger: GCCCCAGGGACAAGGCCATCACCCCGCCACTGCCAG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCTGGCAGTGGCGGGGTaGTGGCCTTGTCCCTGGGGC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFLAVAG*WPCPWG
Trigger: GCCCCAGGGACAAGGCCATCACCCCGCCACTGCCAG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGTCAGAACCTCCTGAATaGTCTGCTTCCGCATCCATG +
Preference number: 4 (lower is better)
Translates to: SGSSMGVKGLCSSCLPTGSEPPE*SASASM
Trigger: CATGGATGCGGAAGCAGATCATTCAGGAGGTTCTGA...CCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573326.1
CDS-3UTR TCA 90 bp TTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCAGTTCCCCTCCCCACTaGCCAAGGTCAGATGTGATG +
Preference number: 4 (lower is better)
Translates to: LDCNLSPEQAVLYSPSSRSSPPH*PRSDVM
Trigger: CATCACATCTGACCTTGGTCAGTGGGGAGGGGAACT...GCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp CAAGCAAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGCTCTGCAGGCAGCTTaGTCACGGTGGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: QASNIHPWPVCQFVWFLPALQAA*SRWTVP
Trigger: AGGAACTGTCCACCGTGAGCAAGCTGCCTGCAGAGC...CGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCCAATGCTGGGGGCTCTaGAGGCAGCTTGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCQCWGL*RQLAHG
Trigger: ACCGTGAGCAAGCTGCCTGCAGAGCCCCCAGCATTG...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CCATCAGGCAGCATGAGCCAGGATGTCATCGGCAGAGAAGGCAGTGCCAGTGAACTGAAGGGGGAATCTTaGTTACACACCTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: PSGSMSQDVIGREGSASELKGES*LHTSAD
Trigger: ATCAGCTGAGGTGTGTAAGCAAGATTCCCCCTTCAG...TTCACTGGCACTGCCTTCTCTGCCGATGACATCCTGGCTCATGCTGCCTGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCAGAGCTACGCTTCTCTaGGGGGACTACGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCRATLL*GDYGVA
Trigger: GGCTACCCCGTAGTCCCCGCAGAGAAGCGTAGCTCT...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCCCCACCTGTCTCTCTTaGCCTCTCCCCAGAGCTACG +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCPTCLS*PLPRAT
Trigger: CGTAGCTCTGGGGAGAGGGCAAGAGAGACAGGTGGG...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACTGGTCATCGTCTGACAGGGGCATCACACTGTCCAGAAGGACTTCTGCTCCCTCCACCTGGGATGAGCTaGTCTTCCCCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: TGHRLTGASHCPEGLLLPPPGMS*SSPYLL
Trigger: AAGAAGATAAGGGGAAGAGCAGCTCATCCCAGGTGG...AGGGAGCAGAAGTCCTTCTGGACAGTGTGATGCCCCTGTCAGACGATGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp AAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGACGCCGCATCGTCCTTTaGCAGCTCTGTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: KSSQITVSTIQSPVQCAGRRIVL*QLCVSR
Trigger: TCGGCTCACACAGAGCTGGCAAAGGACGATGCGGCG...TCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCTGGGCTTTGGCGTCTaGGACTGGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDLGFGV*DWGCWR
Trigger: GCGCCAGCACCCCCAGTCGCAGACGCCAAAGCCCAG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCGGCGGGGCAACAGCTaGCTCTGCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDRRGNS*LCCGRL
Trigger: GAGCCTGCCACAGCAGAGGCAGCTGTTGCCCCGCCG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAATGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGECCTNR*PALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCA...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCGGCTACCATCGGGGTaGGGGATGCGGAGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLERLPSG*GMRSPR
Trigger: GCGCGGACTCCGCATCCCGCACCCCGATGGTAGCCG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000337714.8
CDS-3UTR GCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGGTCACCTGTCCAGTGTaGAGGAAGCCACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQVTCPV*RKPQGP
Trigger: GGGCCCCTGTGGCTTCCTGCACACTGGACAGGTGAC...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACACTCGTAATTACACCTTGCTaGGTAGTGCTCGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: PRSTRDRFINTTSSPTTLVITPC*VVLGSA
Trigger: GGCAGAACCGAGCACTACCCAGCAAGGTGTAATTAC...GAGTGTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp GATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTTGGAAGCTCTCACCTGCTGCTCATCATaGCTGCTGACATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: DEVDLLRVGACLGILEALTCCSS*LLTWPF
Trigger: AAAAGGCCATGTCAGCAGCCATGATGAGCAGCAGGT...GAGAGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACGTGTGGACACTACTTTaGGACAGACGTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDVWTLL*DRRLPR
Trigger: CCGTGGAAGACGTCTGTCCCAAAGTAGTGTCCACAC...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTCGATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCCCTCAGCTGATTTGCTaGAGAATAGTACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: LDLPDDEVDLLRVGACLGPQLIC*RIVHPL
Trigger: CAAAGGGTGTACTATTCTCCAGCAAATCAGCTGAGG...GCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGATCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp AAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGATGGCTGGACCTTCCTTaGCACCCTGCTGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: KSSQITVSTIQSPVQCAGWLDLP*HPAEGG
Trigger: TCCCCCTTCAGCAGGGTGCCAAGGAAGGTCCAGCCA...TCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GGGTGTGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACACTCGATGAACCTACTTaGCAACTTCTCTGCTACATA +
Preference number: 4 (lower is better)
Translates to: GCVCCCTNRCPALTWLTTLDEPT*QLLCYI
Trigger: TATGTAGCAGAGAAGTTGCCAAGTAGGTTCATCGAG...TGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTTTTGGCGTCTGCGACTaGGGGTGCTGGCGCCGCATC +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLFGVCD*GCWRRI
Trigger: GATGCGGCGCCAGCACCCCCAGTCGCAGACGCCAAA...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCTGTCCTTGGTGGGGCTaGACAGAAGGCTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RSWHQMFASENSHSAPACCPWWG*TEGSSG
Trigger: GCCTGAAGAGCCTTCTGTCCAGCCCCACCAAGGACA...GCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp TCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTCTGACAGAGGCCAGGGAGATGTaGTGTGCAGAGATATTTGGC +
Preference number: 4 (lower is better)
Translates to: SSRSWRHLLPVKTGHRLTEAREM*CAEIFG
Trigger: GCCAAATATCTCTGCACACCACATCTCCCTGGCCTC...TGTCAGACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCGAGGCCAGGGAGATGTaGTGTGCAGAGATATTTGGC +
Preference number: 4 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFEAREM*CAEIFG
Trigger: GCCAAATATCTCTGCACACCACATCTCCCTGGCCTC...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGCCGGCAACTCTTCACTaGGGGTGGTCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQPATLH*GWSVPG
Trigger: GCCTGGCACTGACCACCCCCAGTGAAGAGTTGCCGG...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACACTCACCAAAGGGACACTTTaGCTGCTGTCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: PRSTRDRFINTTSSPTTLTKGTL*LLSDMQ
Trigger: CTGCATGTCAGACAGCAGCCAAAGTGTCCCTTTGGT...GAGTGTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATACCCTGGGGCTCGAGCTaGTCTCTGTGCAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFIPWGSS*SLCKSL
Trigger: AAGACTCTTGCACAGAGACCAGCTCGAGCCCCAGGG...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAACTGCTTCCGCATCCATaGTCCATCCATCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGELLPHP*SIHPQP
Trigger: GGGCTGAGGATGGATGGACCATGGATGCGGAAGCAG...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTAGGCTGCGCAGCGCGTaGAAGGTAGGGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLRLRSA*KVGCVC
Trigger: GCACACACACCCTACCTTCCACGCGCTGCGCAGCCT...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCAGAGGTACATCTGCTaGTCGAGGCTGCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLQRYIC*SRLRSA
Trigger: CGCGCTGCGCAGCCTCGACCAGCAGATGTACCTCTG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CCTCGCTCCACCAGGGACCGGTTTATCAACACCACTTCATCTCCAACCACACTCTCTCAGGAAGCAGCATaGGGGTCAAAGGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: PRSTRDRFINTTSSPTTLSQEAA*GSKACV
Trigger: TACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA...GAGTGTGGTTGGAGATGAAGTGGTGTTGATAAACCGGTCCCTGGTGGAGCGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp CTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCCAATTCCTTGGCACCCTGCTaGAGGGGGAATCTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LGTRCLLQKTHIAPLLANSLAPC*RGNLAY
Trigger: GTAAGCAAGATTCCCCCTTCAGCAGGGTGCCAAGGA...ATTGGCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCCCCACCACCTGGGATaGGCTGCTCTTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLPHHLG*AALPLI
Trigger: GATAAGGGGAAGAGCAGCTCATCCCAGGTGGTGGGG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTTTGCCAGCTCTGTGTaGGCCGACTCGATGAACCTA +
Preference number: 4 (lower is better)
Translates to: LDCNLSPEQAVLYSPSSRFASSV*ADSMNL
Trigger: TAGGTTCATCGAGTCGGCTCACACAGAGCTGGCAAA...GCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR TCA 90 bp TGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTTCAGCACCCCATTGCTaGAGGGCACAGTACTTTCTG +
Preference number: 4 (lower is better)
Translates to: WTVTCHLSKQCCIPRHLASAPHC*RAQYFL
Trigger: CAGAAAGTACTGTGCCCTTCAGCAATGGGGTGCTGA...AGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp AACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGGAGTCAGCACCCCATTGCTaGAGGGCACAGTACTTTCTG +
Preference number: 4 (lower is better)
Translates to: NIHPWPVCQFVWFLPGKESAPHC*RAQYFL
Trigger: CAGAAAGTACTGTGCCCTTCAGCAATGGGGTGCTGA...CTCCTTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TCAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGAGCTCTCAGTCTTCTTaGGACTGCAACAGCTATCCA +
Preference number: 4 (lower is better)
Translates to: SGSSMGVKGLCSSCLPTGSSQSS*DCNSYP
Trigger: TGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCT...CCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp TGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTCCTGTCAGAACCTCCTaGATGATCTGCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: WTVTCHLSKQCCIPRHLAPVRTS*MICFRI
Trigger: GATGCGGAAGCAGATCATTCAGGAGGTTCTGACAGG...AGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573326.1
CDS-3UTR TCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCAGGGGCGGCACAGATaGCCGTTATTTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLQGRHR*PLFPLG
Trigger: CCCCAGTGGAAATAACGGTCATCTGTGCCGCCCCTG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp GTGCTGTATTCCCCGTCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTTCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: VLYSPSSRSWRHLLPVKTSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...AGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAATACAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR GCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGCAATGCTGGGGGCTCTaGAGGCAGCTTGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQQCWGL*RQLAHG
Trigger: ACCGTGAGCAAGCTGCCTGCAGAGCCCCCAGCATTG...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCCCCGTCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGACACCTCAGCTGATTTaGTGGAGAATAGTACACCCT +
Preference number: 4 (lower is better)
Translates to: FPVISLMAASASGENWSSTPQLI*WRIVHP
Trigger: AGGGTGTACTATTCTCCAGCAAATCAGCTGAGGTGT...CGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp GATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTTGGAAGCTCTCCTGAAGGGGGAATCTTaGTTACACACCTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: DEVDLLRVGACLGILEALLKGES*LHTSAD
Trigger: ATCAGCTGAGGTGTGTAAGCAAGATTCCCCCTTCAG...GAGAGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CAAGCAAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGCCAGGCTGGGGCCCTTaGTGTTCTCCAATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QASNIHPWPVCQFVWFLPPGWGP*CSPIPR
Trigger: TCTTGGAATTGGAGAACAGCAAGGGCCCCAGCCTGG...CGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTGAAATGTAGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCGTCTGCGACTGGGGGTaGTGGCGCCGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LKCRSWHQMFASENSHSAVCDWG*WRRIVL
Trigger: AAGGACGATGCGGCGCCAGCACCCCCAGTCGCAGAC...GGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGGTCTGCGACTGGGGGTaGTGGCGCCGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKVCDWG*WRRIVL
Trigger: AAGGACGATGCGGCGCCAGCACCCCCAGTCGCAGAC...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAACCAAGCTCTCCTCATTaGCCAGTTCTCCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEPSSPH*PVLPRH
Trigger: GTGTCGAGGGAGAACTGGGCAATGAGGAGAGCTTGG...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCCTGACACACACGACCTaGAACCTTGCCAACCGTGGT +
Preference number: 4 (lower is better)
Translates to: RSWHQMFASENSHSAPACLTHTT*NLANRG
Trigger: ACCACGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAG...GCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCCTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LDCNLSPEQAVLYSPSSRLRVGA*LGILEA
Trigger: AGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAG...GCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp ATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTGTAATTACACCTTGCTaGGTAGTGCTCGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: ISQMMRSTFLGLEPAWAFVITPC*VVLGSA
Trigger: GGCAGAACCGAGCACTACCCAGCAAGGTGTAATTAC...AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACACCTGCTGCTCATCATaGCTGCTGACATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDTCCSS*LLTWPF
Trigger: AAAAGGCCATGTCAGCAGCCATGATGAGCAGCAGGT...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGGAGGCAGCTTGCTCACGGTaGACAGTTCCTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: NIHPWPVCQFVWFLPGKEAACSR*TVPFLE
Trigger: CTCCAGAAAAGGAACTGTCCACCGTGAGCAAGCTGC...CTCCTTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGTTTGGCGTCTGCGACTaGGGGTGCTGGCGCCGCATC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKFGVCD*GCWRRI
Trigger: GATGCGGCGCCAGCACCCCCAGTCGCAGACGCCAAA...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTTGGACTTGGGAGATTATCTaGAAGGCAGCCCGCTTAATC +
Preference number: 4 (lower is better)
Translates to: SQMMRSTFLGLEPAWAFWTWEII*KAARLI
Trigger: GATTAAGCGGGCTGCCTTCCAGATAATCTCCCAAGT...CCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp TGTGTGCTGCTGCACGAACAGGTGCCCGGCATTGACCTGGTTGACCACAATGACGCTTCTGAGATCACTTaGGAGATTATCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CVLLHEQVPGIDLVDHNDASEIT*EIIWKA
Trigger: TGCCTTCCAGATAATCTCCCAAGTGATCTCAGAAGC...GTCATTGTGGTCAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CAAGCAAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGAGGCTCCGCAGTGTCTaGGCCCAAGACAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: QASNIHPWPVCQFVWFLPRLRSV*AQDSFL
Trigger: CAGAAAACTGTCTTGGGCCCAGACACTGCGGAGCCT...CGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCACAGCTGCCTCTGCTGTaGCAGGCTCCGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPQLPLL*QAPQCL
Trigger: CAGACACTGCGGAGCCTGCCACAGCAGAGGCAGCTG...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGATGTCCTTGGTGGGGCTaGACAGAAGGCTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KSSQITVSTIQSPVQCAGCPWWG*TEGSSG
Trigger: GCCTGAAGAGCCTTCTGTCCAGCCCCACCAAGGACA...TCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCTTGGCTTACTGTCCTTaGTGGGGCTGGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RSWHQMFASENSHSAPACLAYCP*WGWTEG
Trigger: GCCTTCTGTCCAGCCCCACCAAGGACAGTAAGCCAA...GCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GAATCAGAGGAAGACCAGTTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTGCCCGGCATTGACCTaGTTGACCACAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: ESEEDQLDCNLSPEQAVLCPALT*LTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCA...CAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTGATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGACCGTTATTTCCACTaGGGTGGGCAAGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEDRYFH*GGQGGD
Trigger: ATCCCCACCTTGCCCACCCCAGTGGAAATAACGGTC...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCAAGCCACAGGGGCCCTaGCCAGAGGGGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPKPQGP*PEGPRA
Trigger: TGCTCTTGGCCCCTCTGGCCAGGGCCCCTGTGGCTT...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGAAACGCCCGCGGGGCTaGGCGACCTTGGGTGGGACG +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLKRPRG*ATLGGT
Trigger: CGTCCCACCCAAGGTCGCCCAGCCCCGCGGGCGTTT...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR TCA 90 bp GACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTCATGTGAGCCGACTCGATaGACCTACTTGGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: DCNLSPEQAVLYSPSSRSCEPTR*TYLATS
Trigger: AGAAGTTGCCAAGTAGGTTCATCGAGTCGGCTCACA...TGAGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR TCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAATTTGCCAGCTCTGTGTaGGCCGACTCGATGAACCTA +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEFASSV*ADSMNL
Trigger: TAGGTTCATCGAGTCGGCTCACACAGAGCTGGCAAA...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTTGGCTGTTCGGTTGCTTCTaGGATCACTTGGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: SQMMRSTFLGLEPAWAFWLFGCF*DHLGDY
Trigger: ATAATCTCCCAAGTGATCTCAGAAGCAACCGAACAG...CCAAAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTCTCAGCCCCCAAGTCTaGCAACTCCCCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLLSPQV*QLPLQH
Trigger: GTGCTGAAGGGGGAGTTGTCAGACTTGGGGGCTGAG...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp AGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCTGGAGCTGCAACTCCTaGATGATCTGCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: RSWHQMFASENSHSAPACWSCNS*MICFRI
Trigger: GATGCGGAAGCAGATCATTCAGGAGTTGCAGCTCCA...GCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp CAAGCAAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGAAACTGGTCATCGTCTaGCAGGGGCATCACACTGTC +
Preference number: 4 (lower is better)
Translates to: QASNIHPWPVCQFVWFLPKLVIV*QGHHTV
Trigger: GACAGTGTGATGCCCCTGTCAGACGATGACCAGTTT...CGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CAGGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCTGTTCATCTTTGACTTaGGTGCCAAGCCCAATTTCA +
Preference number: 4 (lower is better)
Translates to: QEAAWGSKACVVAVYPLGCSSLT*VPSPIS
Trigger: TGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACA...GCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp TCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTCTGACATCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: SSRSWRHLLPVKTGHRLTSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...TGTCAGACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCAGTTCCCCTCCCCACTaGCCAAGGTCAGATGTGATG +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCSSPPH*PRSDVM
Trigger: CATCACATCTGACCTTGGTCAGTGGGGAGGGGAACT...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATATGTACACACGACCTTTaGAAAGTAAACGCCCGCGGG +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFICTHDL*KVNARG
Trigger: CCCGCGGGCGTTTACTTTTCAAAGGTCGTGTGTACA...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR TCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAACGCTCCGGTTAAGTTaGGGTGCAGAGAGGCGACCC +
Preference number: 4 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPTLRLS*GAERRP
Trigger: GGGTCGCCTCTCTGCACCTCAACTTAACCGGAGCGT...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR GCA 90 bp GGAAGCAGCATGGGGGTCAAAGGCTTGTGTAGTAGCTGTCTACCCACTGGGCAAGAAGTAATTACACCTTaGTGGGTAGTGCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: GSSMGVKGLCSSCLPTGQEVITP*WVVLGS
Trigger: AGAACCGAGCACTACCCAGCAAGGTGTAATTACTTC...TTGCCCAGTGGGTAGACAGCTACTACACAAGCCTTTGACCCCCATGCTGCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCGCACCAGCCTCCACCTaGTGCTCATCATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFAPAST*CSSWLL
Trigger: CAGCAGCCATGATGAGCAGCAGGTGGAGGCTGGTGC...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCAGAGCTACGCTTCTCTaGGGGGACTACGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFRATLL*GDYGVA
Trigger: GGCTACCCCGTAGTCCCCGCAGAGAAGCGTAGCTCT...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTCGCCGCATCGTCCTTTaGCAGCTCTGTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLRRIVL*QLCVSR
Trigger: TCGGCTCACACAGAGCTGGCAAAGGACGATGCGGCG...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGGCTTTGGCGTCTaGGACTGGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFLGFGV*DWGCWR
Trigger: GCGCCAGCACCCCCAGTCGCAGACGCCAAAGCCCAG...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACTGGGCTTTGGCGTCTaGGACTGGGGGTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGLGFGV*DWGCWR
Trigger: GCGCCAGCACCCCCAGTCGCAGACGCCAAAGCCCAG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACGGCGGGGCAACAGCTaGCTCTGCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGRRGNS*LCCGRL
Trigger: GAGCCTGCCACAGCAGAGGCAGCTGTTGCCCCGCCG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCGGCGGGGCAACAGCTaGCTCTGCTGTGGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFRRGNS*LCCGRL
Trigger: GAGCCTGCCACAGCAGAGGCAGCTGTTGCCCCGCCG...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATACTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFILRVGA*LGILEA
Trigger: AGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAG...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLCCTNR*PALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCA...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp GCAGGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCAAGTCAGACCTGATTTaGCGGAGCACGTCTACTTTC +
Preference number: 4 (lower is better)
Translates to: AGYQFPSPLTKVRCDDHFKSDLI*RSTSTF
Trigger: GAAAGTAGACGTGCTCCGGCAAATCAGGTCTGACTT...GAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCGTCCAGAAGGACTTCTaGTCCCTGAAACGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCVQKDF*SLKRQG
Trigger: ACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGAC...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATACACCTGAGCAAGCAGTaGTGTATTCCCCGTCATCTC +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFIHLSKQ*CIPRHL
Trigger: GAGATGACGGGGAATACAGCACTGCTTGCTCAGGTG...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCGTCACCTGTCCAGTGTaGAGGAAGCCACAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPVTCPV*RKPQGP
Trigger: GGGCCCCTGTGGCTTCCTGCACACTGGACAGGTGAC...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTTTGGCGTCTGCGACTaGGGGTGCTGGCGCCGCATC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMFGVCD*GCWRRI
Trigger: GATGCGGCGCCAGCACCCCCAGTCGCAGACGCCAAA...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCAGAACCTGTAAGTTCGACACCTCTATCCTaGGCTTTGGCGTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: RLQQLSTESMLFLSEPVSSTPLS*ALASAT
Trigger: AGTCGCAGACGCCAAAGCCCAGGATAGAGGTGTCGA...ACTTACAGGTTCTGACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACGTGTGCAGAGATATTTaGCTTACTGTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDVCRDI*LTVLGG
Trigger: CCCACCAAGGACAGTAAGCCAAATATCTCTGCACAC...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGGAGACCAAAGGGACACTTTaGCTGCTGTCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: NIHPWPVCQFVWFLPGKETKGTL*LLSDMQ
Trigger: CTGCATGTCAGACAGCAGCCAAAGTGTCCCTTTGGT...CTCCTTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCCCTGGGGCTCGAGCTaGTCTCTGTGCAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLPWGSS*SLCKSL
Trigger: AAGACTCTTGCACAGAGACCAGCTCGAGCCCCAGGG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCAGAACCTGTAAGTTGCCCGGCATTGACCTaGTTGACCACAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: RLQQLSTESMLFLSEPVSCPALT*LTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCA...ACTTACAGGTTCTGACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp CAAGCAAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGTTATTTCCACTGGGGTaGGCAAGGTGGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: QASNIHPWPVCQFVWFLPLFPLG*ARWGFQ
Trigger: CTGGAATCCCCACCTTGCCCACCCCAGTGGAAATAA...CGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTCTGACAAGCAACATACATCCCTaGCCTGTCTGCCAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: SSRSWRHLLPVKTGHRLTSNIHP*PVCQFV
Trigger: AACAAACTGGCAGACAGGCCAGGGATGTATGTTGCT...TGTCAGACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACAGCAACATACATCCCTaGCCTGTCTGCCAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDSNIHP*PVCQFV
Trigger: AACAAACTGGCAGACAGGCCAGGGATGTATGTTGCT...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTCTGACAAATTACAACCAGGCTTaGCAGGATACCAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SSRSWRHLLPVKTGHRLTNYNQA*QDTSSP
Trigger: AGGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATT...TGTCAGACGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CAAGCAAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGCAGGAATCAGAGTGCTaGAGCCATGGCTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: QASNIHPWPVCQFVWFLPQESEC*SHGSGV
Trigger: AACACCTGAGCCATGGCTCCAGCACTCTGATTCCTG...CGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTTGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ATCTCCCAGATGATGAGGTCGACCTTCTTAGGGTTGGAGCCTGCCTGGGCATTTCTGTTCGGTTGCTTCTaGGATCACTTGGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: ISQMMRSTFLGLEPAWAFLFGCF*DHLGDY
Trigger: ATAATCTCCCAAGTGATCTCAGAAGCAACCGAACAG...AAATGCCCAGGCAGGCTCCAACCCTAAGAAGGTCGACCTCATCATCTGGGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATAAGTGCTGAAAGAATCTaGGCAGTGTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFISAERI*AVSWRS
Trigger: GCTTCTCCAGGACACTGCTCAGATTCTTTCAGCACT...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTGAATCAGAGGAAGACCAGTTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LNQRKTSWTVTCHLSKQCGVRQG*NVDLGT
Trigger: GGTGCCAAGATCTACATTTCAACCCTGCCTTACACC...GCACTGCTTGCTCAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTGATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR TCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCAAACTGGTCATCGTCTaGCAGGGGCATCACACTGTC +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCKLVIV*QGHHTV
Trigger: GACAGTGTGATGCCCCTGTCAGACGATGACCAGTTT...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGCGAGGCTCCAGAAGTaGAGGGGCAGCTCCGGCTCA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEARLQK*RGSSGS
Trigger: TGAGCCGGAGCTGCCCCTTCACTTCTGGAGCCTCGC...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR GCA 90 bp ATTTTGGAAGCTCTCAGTCTTCTTGAGACTGCAACAGCTATCCACGGAATCCATCCAGCCTCCACCTGCTaGTCATCATGGCTGCTGACA +
Preference number: 4 (lower is better)
Translates to: ILEALSLLETATAIHGIHPASTC*SSWLLT
Trigger: TGTCAGCAGCCATGATGAGCAGCAGGTGGAGGCTGG...ATGGATTCCGTGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCTTCCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACGCACCAGCCTCCACCTaGTGCTCATCATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDAPAST*CSSWLL
Trigger: CAGCAGCCATGATGAGCAGCAGGTGGAGGCTGGTGC...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAGAGCTACGCTTCTCTaGGGGGACTACGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDRATLL*GDYGVA
Trigger: GGCTACCCCGTAGTCCCCGCAGAGAAGCGTAGCTCT...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGAGAGCTACGCTTCTCTaGGGGGACTACGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKRATLL*GDYGVA
Trigger: GGCTACCCCGTAGTCCCCGCAGAGAAGCGTAGCTCT...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCACCTGTCTCTCTTaGCCTCTCCCCAGAGCTACG +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKPTCLS*PLPRAT
Trigger: CGTAGCTCTGGGGAGAGGGCAAGAGAGACAGGTGGG...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCGTCTGCGACTGGGGGTaGTGGCGCCGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFVCDWG*WRRIVL
Trigger: AAGGACGATGCGGCGCCAGCACCCCCAGTCGCAGAC...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGTCTGCGACTGGGGGTaGTGGCGCCGCATCGTCCTT +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEVCDWG*WRRIVL
Trigger: AAGGACGATGCGGCGCCAGCACCCCCAGTCGCAGAC...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCCAAGCTCTCCTCATTaGCCAGTTCTCCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLPSSPH*PVLPRH
Trigger: GTGTCGAGGGAGAACTGGGCAATGAGGAGAGCTTGG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCATCTTCCACCAGGATaGCTGCCCGGTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDHLPPG*LPGPAT
Trigger: AGTTGCCGGACCGGGCAGGCATCCTGGTGGAAGATG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCCTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCLRVGA*LGILEA
Trigger: AGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAG...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNGCVCC*TNRCPA
Trigger: TGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGC +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLKVGCV*CCTNRC
Trigger: GCACCTGTTCGTGCAGCAGCACACACACCCTACCTT...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp AGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCAGAACCTGTAAGTCACCTGAGCAAGCAGTaGTGTATTCCCCGTCATCTC +
Preference number: 4 (lower is better)
Translates to: RLQQLSTESMLFLSEPVSHLSKQ*CIPRHL
Trigger: GAGATGACGGGGAATACAGCACTGCTTGCTCAGGTG...ACTTACAGGTTCTGACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGTAATTACACCTTGCTaGGTAGTGCTCGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEVITPC*VVLGSA
Trigger: GGCAGAACCGAGCACTACCCAGCAAGGTGTAATTAC...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCGTGTGGACACTACTTTaGGACAGACGTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCVWTLL*DRRLPR
Trigger: CCGTGGAAGACGTCTGTCCCAAAGTAGTGTCCACAC...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAGGACAGTTCCTTTTCTaGAGGCTCTGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: KSSQITVSTIQSPVQCAGGQFLF*RLCDTG
Trigger: CCCAGTGTCACAGAGCCTCCAGAAAAGGAACTGTCC...TCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCCTAGAGGAATCGATTTaGCTTCACCACCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RSWHQMFASENSHSAPACLEESI*LHHLSG
Trigger: CCCTGACAGGTGGTGAAGCCAAATCGATTCCTCTAG...GCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GAGGGGCCAAGAGCAGAAGCTGCACTGCAGAGTTTACTTCTACCTACAGGTGACCCTCAGCTGATTTGCTaGAGAATAGTACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: EGPRAEAALQSLLLPTGDPQLIC*RIVHPL
Trigger: CAAAGGGTGTACTATTCTCCAGCAAATCAGCTGAGG...GTCACCTGTAGGTAGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGCCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ATATTGGTGAGGTTCAGCTCTTTGAACTTCTTCCCAATCAAGTTCAGCGCTTTGTGGCTGGACCTTCCTTaGCACCCTGCTGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ILVRFSSLNFFPIKFSALWLDLP*HPAEGG
Trigger: TCCCCCTTCAGCAGGGTGCCAAGGAAGGTCCAGCCA...CAAAGCGCTGAACTTGATTGGGAAGAAGTTCAAAGAGCTGAACCTCACCAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTTGCGACTGGGGGTGCTaGCGCCGCATCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSCDWGC*RRIVLC
Trigger: GCAAAGGACGATGCGGCGCCAGCACCCCCAGTCGCA...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGATGCGACTGGGGGTGCTaGCGCCGCATCGTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGCDWGC*RRIVLC
Trigger: GCAAAGGACGATGCGGCGCCAGCACCCCCAGTCGCA...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTTTGGCGTCTGCGACTaGGGGTGCTGGCGCCGCATC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFFGVCD*GCWRRI
Trigger: GATGCGGCGCCAGCACCCCCAGTCGCAGACGCCAAA...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTCGACACCTCTATCCTaGGCTTTGGCGTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQSTPLS*ALASAT
Trigger: AGTCGCAGACGCCAAAGCCCAGGATAGAGGTGTCGA...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACACTCTTCACTGGGGGTaGTCAGTGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDTLHWG*SVPGRR
Trigger: CCTCCTGCCTGGCACTGACCACCCCCAGTGAAGAGT...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGACTCTTCACTGGGGGTaGTCAGTGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKTLHWG*SVPGRR
Trigger: CCTCCTGCCTGGCACTGACCACCCCCAGTGAAGAGT...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCCGGCAACTCTTCACTaGGGGTGGTCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMPATLH*GWSVPG
Trigger: GCCTGGCACTGACCACCCCCAGTGAAGAGTTGCCGG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCCGGCAACTCTTCACTaGGGGTGGTCAGTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNPATLH*GWSVPG
Trigger: GCCTGGCACTGACCACCCCCAGTGAAGAGTTGCCGG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATAACCAAAGGGACACTTTaGCTGCTGTCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFITKGTL*LLSDMQ
Trigger: CTGCATGTCAGACAGCAGCCAAAGTGTCCCTTTGGT...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCCCTGGGGCTCGAGCTaGTCTCTGTGCAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFPWGSS*SLCKSL
Trigger: AAGACTCTTGCACAGAGACCAGCTCGAGCCCCAGGG...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGGGGCACAGTACTTTCTaGCAGTGGCGGGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKGHSTF*QWRGDG
Trigger: GCCATCACCCCGCCACTGCCAGAAAGTACTGTGCCC...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTAGGCTGCGCAGCGCGTaGAAGGTAGGGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFRLRSA*KVGCVC
Trigger: GCACACACACCCTACCTTCCACGCGCTGCGCAGCCT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGGACCGTTATTTCCACTaGGGTGGGCAAGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQDRYFH*GGQGGD
Trigger: ATCCCCACCTTGCCCACCCCAGTGGAAATAACGGTC...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGGCATTTTGGAAGCTCTCAGTCTTCTTGAGACTGCAACAGCTATCCACGGAGAATCTCCACTTCGTTaGTCTCCTCGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LGILEALSLLETATAIHGESPLR*SPRRRQ
Trigger: TTGCCTCCTACGAGGAGACCAACGAAGTGGAGATTC...TCCGTGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCTTCCAAAATGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGAAGCCACAGGGGCCCTaGCCAGAGGGGCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLKPQGP*PEGPRA
Trigger: TGCTCTTGGCCCCTCTGGCCAGGGCCCCTGTGGCTT...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
3UTR CAA 72 bp TGTGGCAGATCTGGACGCTCTGGGTGTAAGGCAGGGTaGAAATGTAGATCTTGGCACCAGATGTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: CGRSGRSGCKAG*KCRSWHQMFAS
Trigger: TGAAGCAAACATCTGGTGCCAAGATCTACATTTCAACCCTGCCTTACACCCAGAGCGTCCAGATCTGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCGCCATCCTGGAGGCTTaGAGTAATTACACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCAILEA*SNYTLL
Trigger: CAGCAAGGTGTAATTACTTCAAGCCTCCAGGATGGC...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCAATGCCCGAGGACTCTaGTCTTCGGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPNARGL*SSARWV
Trigger: CACCCACCTTGCCGAAGATCAGAGTCCTCGGGCATT...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ATTGGTGAGGTTCAGCTCTTTGAACTTCTTCCCAATCAAGTTCAGCGCTTTGTCTCCTTGGCACCCTGCTaGAGGGGGAATCTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: IGEVQLFELLPNQVQRFVSLAPC*RGNLAY
Trigger: GTAAGCAAGATTCCCCCTTCAGCAGGGTGCCAAGGA...GACAAAGCGCTGAACTTGATTGGGAAGAAGTTCAAAGAGCTGAACCTCACCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCCCCACCACCTGGGATaGGCTGCTCTTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFPHHLG*AALPLI
Trigger: GATAAGGGGAAGAGCAGCTCATCCCAGGTGGTGGGG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCCCCACCACCTGGGATaGGCTGCTCTTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMPHHLG*AALPLI
Trigger: GATAAGGGGAAGAGCAGCTCATCCCAGGTGGTGGGG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCAGTGCTGAAAGAATCTaGGCAGTGTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCSAERI*AVSWRS
Trigger: GCTTCTCCAGGACACTGCTCAGATTCTTTCAGCACT...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTCAGCACCCCATTGCTaGAGGGCACAGTACTTTCTG +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQSAPHC*RAQYFL
Trigger: CAGAAAGTACTGTGCCCTTCAGCAATGGGGTGCTGA...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCTCAGCCCCCAAGTCTaGCAACTCCCCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMLSPQV*QLPLQH
Trigger: GTGCTGAAGGGGGAGTTGTCAGACTTGGGGGCTGAG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCTCAGCCCCCAAGTCTaGCAACTCCCCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLELSPQV*QLPLQH
Trigger: GTGCTGAAGGGGGAGTTGTCAGACTTGGGGGCTGAG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCCAATAGCTCTCAGTCTTCTTaGGACTGCAACAGCTATCCA +
Preference number: 4 (lower is better)
Translates to: LGTRCLLQKTHIAPLLANSSQSS*DCNSYP
Trigger: TGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCT...ATTGGCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCGVRQG*NVDLGT
Trigger: GGTGCCAAGATCTACATTTCAACCCTGCCTTACACC...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTAGGACTTCTGCTCCCTaGAACGGCAGGGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLRTSAP*NGRVTK
Trigger: CTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCCT...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAATCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGESDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTTGAGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCAGAACCACTTCTACCTACAGGTaGCATGTGGCTGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: LLETATAIHGIHAVPVRTTSTYR*HVAGRI
Trigger: GATTCTTCCAGCCACATGTCACCTGTAGGTAGAAGT...GGTTCTGACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCTCAAGAAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR TCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCCCTCACCTCTGGCCTTaGCAACCATCTTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCPHLWP*QPSCFT
Trigger: TGTAAAGCAAGATGGTTGTCAAGGCCAGAGGTGAGG...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572557.5
CDS-3UTR GCA 90 bp AGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGTGTGCAGGAAGCGAAGTAATTACACCTTaGTGGGTAGTGCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSQITVSTIQSPVQCAGSEVITP*WVVLGS
Trigger: AGAACCGAGCACTACCCAGCAAGGTGTAATTACTTC...GCTTCCTGCACACTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCCAATTTGTACTGTCATCTCTaGGTGTTCCTGGTCGCAATC +
Preference number: 4 (lower is better)
Translates to: LGTRCLLQKTHIAPLLANLYCHL*VFLVAI
Trigger: GATTGCGACCAGGAACACGCAGAGATGACAGTACAA...ATTGGCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCCCACCTGTCTCTCTTaGCCTCTCCCCAGAGCTACG +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNPTCLS*PLPRAT
Trigger: CGTAGCTCTGGGGAGAGGGCAAGAGAGACAGGTGGG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCCCACCTGTCTCTCTTaGCCTCTCCCCAGAGCTACG +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMPTCLS*PLPRAT
Trigger: CGTAGCTCTGGGGAGAGGGCAAGAGAGACAGGTGGG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAATCCAATTCCAAGACATaGTCCCGAGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGESNSKT*SRDNRA
Trigger: AGCTCTGTTGTCTCGGGAGCATGTCTTGGAATTGGA...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCTCCAATTCCAAGACATaGTCCCGAGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RSWHQMFASENSHSAPACSNSKT*SRDNRA
Trigger: AGCTCTGTTGTCTCGGGAGCATGTCTTGGAATTGGA...GCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTCCAGGCTGGGGCCCTTaGTGTTCTCCAATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLPGWGP*CSPIPR
Trigger: TCTTGGAATTGGAGAACAGCAAGGGCCCCAGCCTGG...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGACATACTCTTCCTCCTaGACTGGCCCCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKTYSSS*TGPTTW
Trigger: CCAGGTGGTGGGGCCAGTGCAGGAGGAAGAGTATGT...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCGCCGCATCGTCCTTTaGCAGCTCTGTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLERRIVL*QLCVSR
Trigger: TCGGCTCACACAGAGCTGGCAAAGGACGATGCGGCG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCACGACCTGCAACCTTaGCAACCGTGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEHDLQP*QPWWPA
Trigger: TGCTGGCCACCACGGTTGGCAAGGTTGCAGGTCGTG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCACGACCTGCAACCTTaGCAACCGTGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMHDLQP*QPWWPA
Trigger: TGCTGGCCACCACGGTTGGCAAGGTTGCAGGTCGTG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTGGCAACAGCTGCCTCTaGTGTGGCAGGCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSGNSCL*CGRLRS
Trigger: ACTGCGGAGCCTGCCACAGCAGAGGCAGCTGTTGCC...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGGCAACAGCTGCCTCTaGTGTGGCAGGCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSGNSCL*CGRLRS
Trigger: ACTGCGGAGCCTGCCACAGCAGAGGCAGCTGTTGCC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTTTCCACCAGGATGCCTaGCCGGTCCGGCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFFHQDA*PVRQLF
Trigger: GAAGAGTTGCCGGACCGGGCAGGCATCCTGGTGGAA...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTTCCACCAGGATGCCTaGCCGGTCCGGCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEFHQDA*PVRQLF
Trigger: GAAGAGTTGCCGGACCGGGCAGGCATCCTGGTGGAA...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCCAATTATCCACGGAATCCATaGTGTTCCTGTCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: LGTRCLLQKTHIAPLLANYPRNP*CSCQNL
Trigger: CAGGTTCTGACAGGAACAGCATGGATTCCGTGGATA...ATTGGCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTCATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACTGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDCCTNR*PALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCA...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFGCVCC*TNRCPA
Trigger: TGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFGCVCC*TNRCPA
Trigger: TGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMVGCVC*CTNRCP
Trigger: CGGGCACCTGTTCGTGCAGCAGCACACACACCCTAC...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAATATCCACGGAATCCATaGTGTTCCTGTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEYPRNP*CSCQNL
Trigger: GAGGTTCTGACAGGAACAGCATGGATTCCGTGGATA...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337714.8
ENST00000621116.4
CDS-3UTR GCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGCCAAGAGCAGAAGCTaGACTGCAGAGTTTACTTCT +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEAKSRS*TAEFTS
Trigger: AGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGC...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCCAGCCCAGCCTCAGTaGTCACAGGACTGTTACCTT +
Preference number: 4 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFPAQPQ*SQDCYL
Trigger: AAGGTAACAGTCCTGTGAGCACTGAGGCTGGGCTGG...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGGTAGTGCTCGGTTCTaGCACCAAGGGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEGSARF*HQGWGR
Trigger: TCGCCCCCACCCTTGGTGGCAGAACCGAGCACTACC...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGGTAGTGCTCGGTTCTaGCACCAAGGGTGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFGSARF*HQGWGR
Trigger: TCGCCCCCACCCTTGGTGGCAGAACCGAGCACTACC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTCCGGTTAAGTTGAGGTaGAGAGAGGCGACCCGGGCG +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSPVKLR*REATRA
Trigger: CGCCCGGGTCGCCTCTCTGCACCTCAACTTAACCGG...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTGGACAGTTCCTTTTCTaGAGGCTCTGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLGQFLF*RLCDTG
Trigger: CCCAGTGTCACAGAGCCTCCAGAAAAGGAACTGTCC...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGGGACAGTTCCTTTTCTaGAGGCTCTGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQGQFLF*RLCDTG
Trigger: CCCAGTGTCACAGAGCCTCCAGAAAAGGAACTGTCC...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCAAGGTGGGTGTGTCTaGAGCAATGCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKQGGCV*SNAGGS
Trigger: AGAGCCCCCAGCATTGCTCCAGACACACCCACCTTG...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTTGGCTGGACCTTCCTTaGCACCCTGCTGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFWLDLP*HPAEGG
Trigger: TCCCCCTTCAGCAGGGTGCCAAGGAAGGTCCAGCCA...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATTGGCTGGACCTTCCTTaGCACCCTGCTGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNWLDLP*HPAEGG
Trigger: TCCCCCTTCAGCAGGGTGCCAAGGAAGGTCCAGCCA...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGGACTACGGGGTAGCCTaGCTGGACCTTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEDYGVA*LDLPWH
Trigger: GTGCCAAGGAAGGTCCAGCCAGGCTACCCCGTAGTC...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAACTTGGGAGATTATCTaGAAGGCAGCCCGCTTAATC +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGETWEII*KAARLI
Trigger: GATTAAGCGGGCTGCCTTCCAGATAATCTCCCAAGT...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTAGGCTCCGCAGTGTCTaGGCCCAAGACAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLRLRSV*AQDSFL
Trigger: CAGAAAACTGTCTTGGGCCCAGACACTGCGGAGCCT...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACAGCTGCCTCTGCTGTaGCAGGCTCCGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGQLPLL*QAPQCL
Trigger: CAGACACTGCGGAGCCTGCCACAGCAGAGGCAGCTG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTCAGCTGCCTCTGCTGTaGCAGGCTCCGCAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLQLPLL*QAPQCL
Trigger: CAGACACTGCGGAGCCTGCCACAGCAGAGGCAGCTG...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTTGAGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCAGAACCGTGTGCAGAGATATTTaGCTTACTGTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLETATAIHGIHAVPVRTVCRDI*LTVLGG
Trigger: CCCACCAAGGACAGTAAGCCAAATATCTCTGCACAC...GGTTCTGACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCTCAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCCCTGGGGCTCGAGCTaGTCTCTGTGCAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDPWGSS*SLCKSL
Trigger: AAGACTCTTGCACAGAGACCAGCTCGAGCCCCAGGG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTGGGCACAGTACTTTCTaGCAGTGGCGGGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFGHSTF*QWRGDG
Trigger: GCCATCACCCCGCCACTGCCAGAAAGTACTGTGCCC...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGGGGCACAGTACTTTCTaGCAGTGGCGGGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEGHSTF*QWRGDG
Trigger: GCCATCACCCCGCCACTGCCAGAAAGTACTGTGCCC...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCCCCGTCATCTCGCTCATGGCGGCATCTGCTTCCGGTGAAAACTGGTCATCGTTGAAATGTAGATCTTaGCACCAGATGTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FPVISLMAASASGENWSSLKCRS*HQMFAS
Trigger: TGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA...CGATGACCAGTTTTCACCGGAAGCAGATGCCGCCATGAGCGAGATGACGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp ATTTTGGAAGCTCTCAGTCTTCTTGAGACTGCAACAGCTATCCACGGAATCCATTGCCCGGCATTGACCTaGTTGACCACAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: ILEALSLLETATAIHGIHCPALT*LTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCA...ATGGATTCCGTGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCTTCCAAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTAGGCTGCGCAGCGCGTaGAAGGTAGGGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSRLRSA*KVGCVC
Trigger: GCACACACACCCTACCTTCCACGCGCTGCGCAGCCT...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGAGGCTGCGCAGCGCGTaGAAGGTAGGGTGTGTGTGC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGERLRSA*KVGCVC
Trigger: GCACACACACCCTACCTTCCACGCGCTGCGCAGCCT...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGCAGAGGTACATCTGCTaGTCGAGGCTGCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLQRYIC*SRLRSA
Trigger: CGCGCTGCGCAGCCTCGACCAGCAGATGTACCTCTG...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCTGGGGTGGGCAAGGTaGGGATTCCAGGCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFLGWAR*GFQAES
Trigger: ACTCTCAGCCTGGAATCCCCACCTTGCCCACCCCAG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCTGGGGTGGGCAAGGTaGGGATTCCAGGCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLELGWAR*GFQAES
Trigger: ACTCTCAGCCTGGAATCCCCACCTTGCCCACCCCAG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGCTTCCGGTGAAAACTaGTCATCGTCTGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPASGEN*SSSDRG
Trigger: GCCCCTGTCAGACGATGACCAGTTTTCACCGGAAGC...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCCGTCATCTCGCTCATaGCGGCATCTGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEPSSRS*RHLLPV
Trigger: CACCGGAAGCAGATGCCGCCATGAGCGAGATGACGG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTAATGCCCGAGGACTCTaGTCTTCGGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFNARGL*SSARWV
Trigger: CACCCACCTTGCCGAAGATCAGAGTCCTCGGGCATT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCCCCACCACCTGGGATaGGCTGCTCTTCCCCTTATC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEPHHLG*AALPLI
Trigger: GATAAGGGGAAGAGCAGCTCATCCCAGGTGGTGGGG...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCAAGACAGTTTTCTGGTaGACTGGGACACAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCKTVFW*TGTQLS
Trigger: AGAGAGCTGTGTCCCAGTTCACCAGAAAACTGTCTT...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCACTTTGGCTGCTGTCTaGCATGCAGGTGACACAGGT +
Preference number: 4 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFTLAAV*HAGDTG
Trigger: ACCTGTGTCACCTGCATGTCAGACAGCAGCCAAAGT...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTAGTGCTGAAAGAATCTaGGCAGTGTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLSAERI*AVSWRS
Trigger: GCTTCTCCAGGACACTGCTCAGATTCTTTCAGCACT...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp ATTGGTGAGGTTCAGCTCTTTGAACTTCTTCCCAATCAAGTTCAGCGCTTTGTCTCAGCACCCCATTGCTaGAGGGCACAGTACTTTCTG +
Preference number: 4 (lower is better)
Translates to: IGEVQLFELLPNQVQRFVSAPHC*RAQYFL
Trigger: CAGAAAGTACTGTGCCCTTCAGCAATGGGGTGCTGA...GACAAAGCGCTGAACTTGATTGGGAAGAAGTTCAAAGAGCTGAACCTCACCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCTCAGCCCCCAAGTCTaGCAACTCCCCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGELSPQV*QLPLQH
Trigger: GTGCTGAAGGGGGAGTTGTCAGACTTGGGGGCTGAG...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCCTCAGCCCCCAAGTCTaGCAACTCCCCCTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFLSPQV*QLPLQH
Trigger: GTGCTGAAGGGGGAGTTGTCAGACTTGGGGGCTGAG...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCAGGGGCGGCACAGATaGCCGTTATTTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEQGRHR*PLFPLG
Trigger: CCCCAGTGGAAATAACGGTCATCTGTGCCGCCCCTG...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCAGGGGCGGCACAGATaGCCGTTATTTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFQGRHR*PLFPLG
Trigger: CCCCAGTGGAAATAACGGTCATCTGTGCCGCCCCTG...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTCAGGGGCGGCACAGATaGCCGTTATTTCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSQGRHR*PLFPLG
Trigger: CCCCAGTGGAAATAACGGTCATCTGTGCCGCCCCTG...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCAGGACTTCTGCTCCCTaGAACGGCAGGGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPRTSAP*NGRVTK
Trigger: CTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCCT...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTACCACACTCCACAGCTaGATCAGAGGAAGACCAGTT +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLTTLHS*IRGRPV
Trigger: AACTGGTCTTCCTCTGATTCAGCTGTGGAGTGTGGT...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCACCAGCCTCCACCTaGTGCTCATCATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSAPAST*CSSWLL
Trigger: CAGCAGCCATGATGAGCAGCAGGTGGAGGCTGGTGC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGGCTCTGCAGGCAGCTTaGTCACGGTGGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMALQAA*SRWTVP
Trigger: AGGAACTGTCCACCGTGAGCAAGCTGCCTGCAGAGC...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTCAATGCTGGGGGCTCTaGAGGCAGCTTGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSQCWGL*RQLAHG
Trigger: ACCGTGAGCAAGCTGCCTGCAGAGCCCCCAGCATTG...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTCAATGCTGGGGGCTCTaGAGGCAGCTTGCTCACGGT +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLQCWGL*RQLAHG
Trigger: ACCGTGAGCAAGCTGCCTGCAGAGCCCCCAGCATTG...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCCAATACACCTCAGCTGATTTaGTGGAGAATAGTACACCCT +
Preference number: 4 (lower is better)
Translates to: LGTRCLLQKTHIAPLLANTPQLI*WRIVHP
Trigger: AGGGTGTACTATTCTCCAGCAAATCAGCTGAGGTGT...ATTGGCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCCGCCGCATCGTCCTTTaGCAGCTCTGTGTGAGCCGA +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFRRIVL*QLCVSR
Trigger: TCGGCTCACACAGAGCTGGCAAAGGACGATGCGGCG...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCACGACCTGCAACCTTaGCAACCGTGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEHDLQP*QPWWPA
Trigger: TGCTGGCCACCACGGTTGGCAAGGTTGCAGGTCGTG...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGCACGACCTGCAACCTTaGCAACCGTGGTGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLHDLQP*QPWWPA
Trigger: TGCTGGCCACCACGGTTGGCAAGGTTGCAGGTCGTG...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTTTCCACCAGGATGCCTaGCCGGTCCGGCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSFHQDA*PVRQLF
Trigger: GAAGAGTTGCCGGACCGGGCAGGCATCCTGGTGGAA...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTCCACCAGGATGCCTaGCCGGTCCGGCAACTCTTC +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLFHQDA*PVRQLF
Trigger: GAAGAGTTGCCGGACCGGGCAGGCATCCTGGTGGAA...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCATCTTCCACCAGGATaGCTGCCCGGTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFHLPPG*LPGPAT
Trigger: AGTTGCCGGACCGGGCAGGCATCCTGGTGGAAGATG...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTCATCTTCCACCAGGATaGCTGCCCGGTCCGGCAACT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSHLPPG*LPGPAT
Trigger: AGTTGCCGGACCGGGCAGGCATCCTGGTGGAAGATG...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMCCTNR*PALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCA...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFVGCVC*CTNRCP
Trigger: CGGGCACCTGTTCGTGCAGCAGCACACACACCCTAC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSVGCVC*CTNRCP
Trigger: CGGGCACCTGTTCGTGCAGCAGCACACACACCCTAC...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTAGGGTGTGTGTGCTaGTGCACGAACAGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGVGCVC*CTNRCP
Trigger: CGGGCACCTGTTCGTGCAGCAGCACACACACCCTAC...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDKVGCV*CCTNRC
Trigger: GCACCTGTTCGTGCAGCAGCACACACACCCTACCTT...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGGGCCAGGAATCAGAGTaGTGGAGCCATGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEGQESE*WSHGSG
Trigger: ACCTGAGCCATGGCTCCAGCACTCTGATTCCTGGCC...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTGCAGCTTGCTCACGGTaGACAGTTCCTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLAACSR*TVPFLE
Trigger: CTCCAGAAAAGGAACTGTCCACCGTGAGCAAGCTGC...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCTAGAGGAATCGATTTaGCTTCACCACCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLLEESI*LHHLSG
Trigger: CCCTGACAGGTGGTGAAGCCAAATCGATTCCTCTAG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGTGGCTGGACCTTCCTTaGCACCCTGCTGAAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLWLDLP*HPAEGG
Trigger: TCCCCCTTCAGCAGGGTGCCAAGGAAGGTCCAGCCA...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGACTACGGGGTAGCCTaGCTGGACCTTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSDYGVA*LDLPWH
Trigger: GTGCCAAGGAAGGTCCAGCCAGGCTACCCCGTAGTC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCGACTACGGGGTAGCCTaGCTGGACCTTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFDYGVA*LDLPWH
Trigger: GTGCCAAGGAAGGTCCAGCCAGGCTACCCCGTAGTC...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGACTACGGGGTAGCCTaGCTGGACCTTCCTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGDYGVA*LDLPWH
Trigger: GTGCCAAGGAAGGTCCAGCCAGGCTACCCCGTAGTC...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCTAAAGAGGCCAGGCTaGGGCCCTTGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMLKRPG*GPCCSP
Trigger: TGGAGAACAGCAAGGGCCCCAGCCTGGCCTCTTTAG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAGCAACATACATCCCTGGCCTGTCTGCCAGTTTGTTTGGTTTTTGCCGGGGAAGCTTCTGAGATCACTTaGGAGATTATCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KQHTSLACLPVCLVFAGEASEIT*EIIWKA
Trigger: TGCCTTCCAGATAATCTCCCAAGTGATCTCAGAAGC...TTCCCCGGCAAAAACCAAACAAACTGGCAGACAGGCCAGGGATGTATGTTGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACAACCTTGCCAACCGTaGTGGCCAGCACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGQPCQP*WPAPVR
Trigger: CCGAACAGGTGCTGGCCACCACGGTTGGCAAGGTTG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTCAACCTTGCCAACCGTaGTGGCCAGCACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSQPCQP*WPAPVR
Trigger: CCGAACAGGTGCTGGCCACCACGGTTGGCAAGGTTG...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGCAACCTTGCCAACCGTaGTGGCCAGCACCTGTTCGG +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLQPCQP*WPAPVR
Trigger: CCGAACAGGTGCTGGCCACCACGGTTGGCAAGGTTG...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGCCCTTGGAGCTGACTaGCCTGACACACACGACCTG +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFALGAD*PDTHDL
Trigger: CAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGCCCTTGGAGCTGACTaGCCTGACACACACGACCTG +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLALGAD*PDTHDL
Trigger: CAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGC...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTGCCCTTGGAGCTGACTaGCCTGACACACACGACCTG +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLALGAD*PDTHDL
Trigger: CAGGTCGTGTGTGTCAGGCCAGTCAGCTCCAAGGGC...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGTTGGCTTACTGTCCTTaGTGGGGCTGGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKLAYCP*WGWTEG
Trigger: GCCTTCTGTCCAGCCCCACCAAGGACAGTAAGCCAA...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCGTGTGCAGAGATATTTaGCTTACTGTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCVCRDI*LTVLGG
Trigger: CCCACCAAGGACAGTAAGCCAAATATCTCTGCACAC...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCACTCTTCACTGGGGGTaGTCAGTGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFTLHWG*SVPGRR
Trigger: CCTCCTGCCTGGCACTGACCACCCCCAGTGAAGAGT...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGAGTACTTTCTGGCAGTaGCGGGGTGATGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKSTFWQ*RGDGLV
Trigger: GACAAGGCCATCACCCCGCCACTGCCAGAAAGTACT...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGGGCACAGTACTTTCTaGCAGTGGCGGGGTGATGGC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFGHSTF*QWRGDG
Trigger: GCCATCACCCCGCCACTGCCAGAAAGTACTGTGCCC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCTGCTTCCGCATCCATaGTCCATCCATCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLELLPHP*SIHPQP
Trigger: GGGCTGAGGATGGATGGACCATGGATGCGGAAGCAG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTCTGGGGTGGGCAAGGTaGGGATTCCAGGCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLLGWAR*GFQAES
Trigger: ACTCTCAGCCTGGAATCCCCACCTTGCCCACCCCAG...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGCTGGGGTGGGCAAGGTaGGGATTCCAGGCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLLGWAR*GFQAES
Trigger: ACTCTCAGCCTGGAATCCCCACCTTGCCCACCCCAG...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGGCTTCCGGTGAAAACTaGTCATCGTCTGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKASGEN*SSSDRG
Trigger: GCCCCTGTCAGACGATGACCAGTTTTCACCGGAAGC...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTCCGTCATCTCGCTCATaGCGGCATCTGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSPSSRS*RHLLPV
Trigger: CACCGGAAGCAGATGCCGCCATGAGCGAGATGACGG...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCCGTCATCTCGCTCATaGCGGCATCTGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSPSSRS*RHLLPV
Trigger: CACCGGAAGCAGATGCCGCCATGAGCGAGATGACGG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCCATGGCTCAGGTGTTaGTCCCAGCCCAGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSPWLRC*SQPSLS
Trigger: ACTGAGGCTGGGCTGGGACCAACACCTGAGCCATGG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGAGTGCTGGAGCCATaGCTCAGGTGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLERVLEP*LRCWSQ
Trigger: CTGGGACCAACACCTGAGCCATGGCTCCAGCACTCT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCCTCAGCAGCATGGCTaGGCCAGGAATCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNPQQHG*ARNQSA
Trigger: AGCACTCTGATTCCTGGCCCAGCCATGCTGCTGAGG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGAGCCCGAAACACGGTTaGATCACAACCGGCCGATGT +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKSPKHG*ITTGRC
Trigger: ACATCGGCCGGTTGTGATCCAACCGTGTTTCGGGCT...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621116.4
CDS-3UTR TCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGAATGCCCGAGGACTCTaGTCTTCGGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLNARGL*SSARWV
Trigger: CACCCACCTTGCCGAAGATCAGAGTCCTCGGGCATT...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTAATGCCCGAGGACTCTaGTCTTCGGCAAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFNARGL*SSARWV
Trigger: CACCCACCTTGCCGAAGATCAGAGTCCTCGGGCATT...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTCCTTGGCACCCTGCTaGAGGGGGAATCTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLESLAPC*RGNLAY
Trigger: GTAAGCAAGATTCCCCCTTCAGCAGGGTGCCAAGGA...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTTCCTTGGCACCCTGCTaGAGGGGGAATCTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFSLAPC*RGNLAY
Trigger: GTAAGCAAGATTCCCCCTTCAGCAGGGTGCCAAGGA...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TTGAAATGTAGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCTGTAAGTTAGCGGTCTaGACTGTCTACGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LKCRSWHQMFASENSHSACKLAV*TVYAGV
Trigger: GACCCCAGCGTAGACAGTTCAGACCGCTAACTTACA...GGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTAGCTCTCAGTCTTCTTaGGACTGCAACAGCTATCCA +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLSSQSS*DCNSYP
Trigger: TGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCT...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACTTCTGCTCCCTaGAACGGCAGGGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLERTSAP*NGRVTK
Trigger: CTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCCT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATAGGACTTCTGCTCCCTaGAACGGCAGGGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNRTSAP*NGRVTK
Trigger: CTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCCT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAACCACACTCCACAGCTaGATCAGAGGAAGACCAGTT +
Preference number: 4 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPTTLHS*IRGRPV
Trigger: AACTGGTCTTCCTCTGATTCAGCTGTGGAGTGTGGT...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ATTTTGGAAGCTCTCAGTCTTCTTGAGACTGCAACAGCTATCCACGGAATCCATACCACACTCCACAGCTaGATCAGAGGAAGACCAGTT +
Preference number: 4 (lower is better)
Translates to: ILEALSLLETATAIHGIHTTLHS*IRGRPV
Trigger: AACTGGTCTTCCTCTGATTCAGCTGTGGAGTGTGGT...ATGGATTCCGTGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCTTCCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR TCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTACCACACTCCACAGCTaGATCAGAGGAAGACCAGTT +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLTTLHS*IRGRPV
Trigger: AACTGGTCTTCCTCTGATTCAGCTGTGGAGTGTGGT...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCCTGAAACGGCAGGGTaGCAAAGTCAGACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDPETAG*QSQTFH
Trigger: GTGGAAAGTCTGACTTTGTCACCCTGCCGTTTCAGG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573326.1
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTGCTCTGCAGGCAGCTTaGTCACGGTGGACAGTTCCT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSALQAA*SRWTVP
Trigger: AGGAACTGTCCACCGTGAGCAAGCTGCCTGCAGAGC...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCACCACCTGGGATGAGCTaGTCTTCCCCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPPPGMS*SSPYLL
Trigger: AAGAAGATAAGGGGAAGAGCAGCTCATCCCAGGTGG...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTACATACTCTTCCTCCTaGACTGGCCCCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLTYSSS*TGPTTW
Trigger: CCAGGTGGTGGGGCCAGTGCAGGAGGAAGAGTATGT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAACATACTCTTCCTCCTaGACTGGCCCCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGTYSSS*TGPTTW
Trigger: CCAGGTGGTGGGGCCAGTGCAGGAGGAAGAGTATGT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTACATACTCTTCCTCCTaGACTGGCCCCACCACCTGG +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFTYSSS*TGPTTW
Trigger: CCAGGTGGTGGGGCCAGTGCAGGAGGAAGAGTATGT...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCCAAGCTCTCCTCATTaGCCAGTTCTCCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEPSSPH*PVLPRH
Trigger: GTGTCGAGGGAGAACTGGGCAATGAGGAGAGCTTGG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCTGACACACACGACCTaGAACCTTGCCAACCGTGGT +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLELTHTT*NLANRG
Trigger: ACCACGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCTGACACACACGACCTaGAACCTTGCCAACCGTGGT +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMLTHTT*NLANRG
Trigger: ACCACGGTTGGCAAGGTTGCAGGTCGTGTGTGTCAG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTGGCAACAGCTGCCTCTaGTGTGGCAGGCTCCGCAGT +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCGNSCL*CGRLRS
Trigger: ACTGCGGAGCCTGCCACAGCAGAGGCAGCTGTTGCC...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGTCGAGCTGGTCTCTGTaGAAGAGTCTTCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKSSWSL*KSLQAL
Trigger: CAGGGCTTGAAGACTCTTGCACAGAGACCAGCTCGA...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTGCTGCACGAACAGGTaGCCGGCATTGACCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFCCTNR*PALTWL
Trigger: CAACCAGGTCAATGCCGGGCACCTGTTCGTGCAGCA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTGGGTGTGTGTGCTGCTaGACGAACAGGTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCGCVCC*TNRCPA
Trigger: TGCCGGGCACCTGTTCGTGCAGCAGCACACACACCC...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNKVGCV*CCTNRC
Trigger: GCACCTGTTCGTGCAGCAGCACACACACCCTACCTT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGAAGGTAGGGTGTGTGTaGTGCTGCACGAACAGGTGC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMKVGCV*CCTNRC
Trigger: GCACCTGTTCGTGCAGCAGCACACACACCCTACCTT...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTCCAGAAGGACTTCTaGTCCCTGAAACGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNVQKDF*SLKRQG
Trigger: ACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGAC...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGGTCCAGAAGGACTTCTaGTCCCTGAAACGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEVQKDF*SLKRQG
Trigger: ACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGAC...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCACCTGAGCAAGCAGTaGTGTATTCCCCGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKHLSKQ*CIPRHL
Trigger: GAGATGACGGGGAATACAGCACTGCTTGCTCAGGTG...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGGCCAGGAATCAGAGTaGTGGAGCCATGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSGQESE*WSHGSG
Trigger: ACCTGAGCCATGGCTCCAGCACTCTGATTCCTGGCC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCACAGGTGCCAGGAATaGCTTCCTGGGTACATGGAG +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFHRCQE*LPGYME
Trigger: CTCCATGTACCCAGGAAGGCATTCCTGGCACCTGTG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572557.5
CDS-3UTR CCA 90 bp TTGAAATGTAGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCGGACAGTTCCTTTTCTaGAGGCTCTGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: LKCRSWHQMFASENSHSAGQFLF*RLCDTG
Trigger: CCCAGTGTCACAGAGCCTCCAGAAAAGGAACTGTCC...GGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp ATATTGGTGAGGTTCAGCTCTTTGAACTTCTTCCCAATCAAGTTCAGCGCTTTGGGACAGTTCCTTTTCTaGAGGCTCTGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: ILVRFSSLNFFPIKFSALGQFLF*RLCDTG
Trigger: CCCAGTGTCACAGAGCCTCCAGAAAAGGAACTGTCC...CAAAGCGCTGAACTTGATTGGGAAGAAGTTCAAAGAGCTGAACCTCACCAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACGGACAGTTCCTTTTCTaGAGGCTCTGTGACACTGGG +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDGQFLF*RLCDTG
Trigger: CCCAGTGTCACAGAGCCTCCAGAAAAGGAACTGTCC...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCAAGGTGGGTGTGTCTaGAGCAATGCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFQGGCV*SNAGGS
Trigger: AGAGCCCCCAGCATTGCTCCAGACACACCCACCTTG...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCAAGGTGGGTGTGTCTaGAGCAATGCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSQGGCV*SNAGGS
Trigger: AGAGCCCCCAGCATTGCTCCAGACACACCCACCTTG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACAAGGTGGGTGTGTCTaGAGCAATGCTGGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGQGGCV*SNAGGS
Trigger: AGAGCCCCCAGCATTGCTCCAGACACACCCACCTTG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTCTAGAGGAATCGATTTaGCTTCACCACCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLLEESI*LHHLSG
Trigger: CCCTGACAGGTGGTGAAGCCAAATCGATTCCTCTAG...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTTGCCCTCAGCTGATTTGCTaGAGAATAGTACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: AENQHKPAGLLNTILWLCPQLIC*RIVHPL
Trigger: CAAAGGGTGTACTATTCTCCAGCAAATCAGCTGAGG...GCAAAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCTAAAGAGGCCAGGCTaGGGCCCTTGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSLKRPG*GPCCSP
Trigger: TGGAGAACAGCAAGGGCCCCAGCCTGGCCTCTTTAG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCTAAAGAGGCCAGGCTaGGGCCCTTGCTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGELKRPG*GPCCSP
Trigger: TGGAGAACAGCAAGGGCCCCAGCCTGGCCTCTTTAG...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GAATCAGAGGAAGACCAGTTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGCTCGATGAACCTACTTaGCAACTTCTCTGCTACATA +
Preference number: 4 (lower is better)
Translates to: ESEEDQLDCNLSPEQAVLLDEPT*QLLCYI
Trigger: TATGTAGCAGAGAAGTTGCCAAGTAGGTTCATCGAG...CAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTGATTC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTTCGACACCTCTATCCTaGGCTTTGGCGTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFSTPLS*ALASAT
Trigger: AGTCGCAGACGCCAAAGCCCAGGATAGAGGTGTCGA...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTCGACACCTCTATCCTaGGCTTTGGCGTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMSTPLS*ALASAT
Trigger: AGTCGCAGACGCCAAAGCCCAGGATAGAGGTGTCGA...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTAGGCTCCGCAGTGTCTaGGCCCAAGACAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFRLRSV*AQDSFL
Trigger: CAGAAAACTGTCTTGGGCCCAGACACTGCGGAGCCT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGTGTCCTTGGTGGGGCTaGACAGAAGGCTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGECPWWG*TEGSSG
Trigger: GCCTGAAGAGCCTTCTGTCCAGCCCCACCAAGGACA...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGTGTCCTTGGTGGGGCTaGACAGAAGGCTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLCPWWG*TEGSSG
Trigger: GCCTGAAGAGCCTTCTGTCCAGCCCCACCAAGGACA...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGCCCTGGGGCTCGAGCTaGTCTCTGTGCAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLPWGSS*SLCKSL
Trigger: AAGACTCTTGCACAGAGACCAGCTCGAGCCCCAGGG...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACCCTGGGGCTCGAGCTaGTCTCTGTGCAAGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGPWGSS*SLCKSL
Trigger: AAGACTCTTGCACAGAGACCAGCTCGAGCCCCAGGG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGTACTTTCTGGCAGTaGCGGGGTGATGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLESTFWQ*RGDGLV
Trigger: GACAAGGCCATCACCCCGCCACTGCCAGAAAGTACT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGCTTCCGCATCCATaGTCCATCCATCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFLLPHP*SIHPQP
Trigger: GGGCTGAGGATGGATGGACCATGGATGCGGAAGCAG...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCTGCTTCCGCATCCATaGTCCATCCATCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGELLPHP*SIHPQP
Trigger: GGGCTGAGGATGGATGGACCATGGATGCGGAAGCAG...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGCTGCTTCCGCATCCATaGTCCATCCATCCTCAGCCC +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLLLPHP*SIHPQP
Trigger: GGGCTGAGGATGGATGGACCATGGATGCGGAAGCAG...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTGCCCGGCATTGACCTaGTTGACCACAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLECPALT*LTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCA...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTGCCCGGCATTGACCTaGTTGACCACAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMCPALT*LTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCA...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCGCTAGCCCAGGCGGGTaGAACACAGAGACATTAAAT +
Preference number: 4 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFASPGG*NTETLN
Trigger: ATTTAATGTCTCTGTGTTCCACCCGCCTGGGCTAGC...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337714.8
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGTTATTTCCACTGGGGTaGGCAAGGTGGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKLFPLG*ARWGFQ
Trigger: CTGGAATCCCCACCTTGCCCACCCCAGTGGAAATAA...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAGCTGAGAACCAGCATAAGCCAGCTGGCTTGTTAAACACTATCCTTTGGCTTCAGAGGAAGACCAGTTaGACTGTAACTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: TAENQHKPAGLLNTILWLQRKTS*TVTCHL
Trigger: CAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTG...AAGCCAAAGGATAGTGTTTAACAAGCCAGCTGGCTTATGCTGGTTCTCAGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp GGCATTGACCTGGTTGACCACAATGACCTCCACGGTGATGCCATCAGGCAGCATAATAGGACTACAGTATaGAGAAAGAAAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: GIDLVDHNDLHGDAIRQHNRTTV*RKKGLS
Trigger: AGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATT...ATGCTGCCTGATGGCATCACCGTGGAGGTCATTGTGGTCAACCAGGTCAATGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGAGAGTGCTGGAGCCATaGCTCAGGTGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGERVLEP*LRCWSQ
Trigger: CTGGGACCAACACCTGAGCCATGGCTCCAGCACTCT...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAGAGTGCTGGAGCCATaGCTCAGGTGTTGGTCCCAG +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFRVLEP*LRCWSQ
Trigger: CTGGGACCAACACCTGAGCCATGGCTCCAGCACTCT...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ATATTGGTGAGGTTCAGCTCTTTGAACTTCTTCCCAATCAAGTTCAGCGCTTTGCAGGAATCAGAGTGCTaGAGCCATGGCTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: ILVRFSSLNFFPIKFSALQESEC*SHGSGV
Trigger: AACACCTGAGCCATGGCTCCAGCACTCTGATTCCTG...CAAAGCGCTGAACTTGATTGGGAAGAAGTTCAAAGAGCTGAACCTCACCAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCCTCAGCAGCATGGCTaGGCCAGGAATCAGAGTGCT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSPQQHG*ARNQSA
Trigger: AGCACTCTGATTCCTGGCCCAGCCATGCTGCTGAGG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTGACTTTCCACTGGGGTaGGCAAGGTGGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLDFPLG*ARWGFQ
Trigger: CTGGAATCCCCACCTTGCCCACCCCAGTGGAAAGTC...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573326.1
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTAGTCAGACTTTCCACTaGGGTGGGCAAGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFSQTFH*GGQGGD
Trigger: ATCCCCACCTTGCCCACCCCAGTGGAAAGTCTGACT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573326.1
CDS-3UTR TCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTCCTTGGCACCCTGCTaGAGGGGGAATCTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFSLAPC*RGNLAY
Trigger: GTAAGCAAGATTCCCCCTTCAGCAGGGTGCCAAGGA...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTTCCTTGGCACCCTGCTaGAGGGGGAATCTTGCTTAC +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSSLAPC*RGNLAY
Trigger: GTAAGCAAGATTCCCCCTTCAGCAGGGTGCCAAGGA...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTTTTGCCAGCTCTGTGTaGGCCGACTCGATGAACCTA +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFFASSV*ADSMNL
Trigger: TAGGTTCATCGAGTCGGCTCACACAGAGCTGGCAAA...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATTGTCTGACATGCAGGTaGCACAGGTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNCLTCR*HRWHLP
Trigger: TGGAAGATGCCACCTGTGTCACCTGCATGTCAGACA...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTACTTTGGCTGCTGTCTaGCATGCAGGTGACACAGGT +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFTLAAV*HAGDTG
Trigger: ACCTGTGTCACCTGCATGTCAGACAGCAGCCAAAGT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TTGAAATGTAGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LKCRSWHQMFASENSHSAGVRQG*NVDLGT
Trigger: GGTGCCAAGATCTACATTTCAACCCTGCCTTACACC...GGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR TCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDGVRQG*NVDLGT
Trigger: GGTGCCAAGATCTACATTTCAACCCTGCCTTACACC...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKGVRQG*NVDLGT
Trigger: GGTGCCAAGATCTACATTTCAACCCTGCCTTACACC...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCCATCCTGGAGGCTTaGAGTAATTACACCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNAILEA*SNYTSS
Trigger: GGAGCTGGTGTAATTACTTCAAGCCTCCAGGATGGC...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000337714.8
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCCTGTCAGAACCTCCTaGATGATCTGCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFPVRTS*MICFRI
Trigger: GATGCGGAAGCAGATCATTCAGGAGGTTCTGACAGG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAGGACTTCTGCTCCCTaGAACGGCAGGGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFRTSAP*NGRVTK
Trigger: CTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCCT...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTAGGACTTCTGCTCCCTaGAACGGCAGGGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLRTSAP*NGRVTK
Trigger: CTTTGTCACCCTGCCGTTTCAGGGAGCAGAAGTCCT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAAACTGGTCATCGTCTaGCAGGGGCATCACACTGTC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEKLVIV*QGHHTV
Trigger: GACAGTGTGATGCCCCTGTCAGACGATGACCAGTTT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTAAACTGGTCATCGTCTaGCAGGGGCATCACACTGTC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFKLVIV*QGHHTV
Trigger: GACAGTGTGATGCCCCTGTCAGACGATGACCAGTTT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACACCACACTCCACAGCTaGATCAGAGGAAGACCAGTT +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDTTLHS*IRGRPV
Trigger: AACTGGTCTTCCTCTGATTCAGCTGTGGAGTGTGGT...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAAGTTCCCCTCCCCACTaGCCAAGGTCAGATGTGATG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGSSPPH*PRSDVM
Trigger: CATCACATCTGACCTTGGTCAGTGGGGAGGGGAACT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTGCACCAGCCTCCACCTaGTGCTCATCATGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCAPAST*CSSWLL
Trigger: CAGCAGCCATGATGAGCAGCAGGTGGAGGCTGGTGC...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCACTGAAGGGGGAATCTTaGTTACACACCTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPLKGES*LHTSAD
Trigger: ATCAGCTGAGGTGTGTAAGCAAGATTCCCCCTTCAG...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ATTGGTGAGGTTCAGCTCTTTGAACTTCTTCCCAATCAAGTTCAGCGCTTTGTCTCCAATTCCAAGACATaGTCCCGAGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: IGEVQLFELLPNQVQRFVSNSKT*SRDNRA
Trigger: AGCTCTGTTGTCTCGGGAGCATGTCTTGGAATTGGA...GACAAAGCGCTGAACTTGATTGGGAAGAAGTTCAAAGAGCTGAACCTCACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCCAGGCTGGGGCCCTTaGTGTTCTCCAATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFPGWGP*CSPIPR
Trigger: TCTTGGAATTGGAGAACAGCAAGGGCCCCAGCCTGG...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCCAGGCTGGGGCCCTTaGTGTTCTCCAATTCCAAGA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEPGWGP*CSPIPR
Trigger: TCTTGGAATTGGAGAACAGCAAGGGCCCCAGCCTGG...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTCCAAGCTCTCCTCATTaGCCAGTTCTCCCTCGACAC +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLPSSPH*PVLPRH
Trigger: GTGTCGAGGGAGAACTGGGCAATGAGGAGAGCTTGG...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTCGAGCTGGTCTCTGTaGAAGAGTCTTCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMSSWSL*KSLQAL
Trigger: CAGGGCTTGAAGACTCTTGCACAGAGACCAGCTCGA...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNLRVGA*LGILEA
Trigger: AGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTCATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGTCCAGAAGGACTTCTaGTCCCTGAAACGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSVQKDF*SLKRQG
Trigger: ACCCTGCCGTTTCAGGGAGCAGAAGTCCTTCTGGAC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCACCTGAGCAAGCAGTaGTGTATTCCCCGTCATCTC +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNHLSKQ*CIPRHL
Trigger: GAGATGACGGGGAATACAGCACTGCTTGCTCAGGTG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCACCTGAGCAAGCAGTaGTGTATTCCCCGTCATCTC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMHLSKQ*CIPRHL
Trigger: GAGATGACGGGGAATACAGCACTGCTTGCTCAGGTG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGCCAGCCCAGCCTCAGTaGTCACAGGACTGTTACCTT +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLPAQPQ*SQDCYL
Trigger: AAGGTAACAGTCCTGTGAGCACTGAGGCTGGGCTGG...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCCAGCCCAGCCTCAGTaGTCACAGGACTGTTACCTT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSPAQPQ*SQDCYL
Trigger: AAGGTAACAGTCCTGTGAGCACTGAGGCTGGGCTGG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGTGGTCACAACACAGGTaGCAGGAATGCCTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLWSQHR*QECLPG
Trigger: CCCAGGAAGGCATTCCTGGCACCTGTGTTGTGACCA...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572557.5
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGAAGAGCGAACGGAACTaGATTGCCATCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMKSERN*IAILEA
Trigger: AGCCTCCAGGATGGCAATCCAGTTCCGTTCGCTCTT...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGACCTGCTGCTCATCATaGCTGCTGACATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKTCCSS*LLTWPF
Trigger: AAAAGGCCATGTCAGCAGCCATGATGAGCAGCAGGT...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACACCTGCTGCTCATCATaGCTGCTGACATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDTCCSS*LLTWPF
Trigger: AAAAGGCCATGTCAGCAGCCATGATGAGCAGCAGGT...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTAGGCTCCGCAGTGTCTaGGCCCAAGACAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLRLRSV*AQDSFL
Trigger: CAGAAAACTGTCTTGGGCCCAGACACTGCGGAGCCT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAAGGCTCCGCAGTGTCTaGGCCCAAGACAGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGRLRSV*AQDSFL
Trigger: CAGAAAACTGTCTTGGGCCCAGACACTGCGGAGCCT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTTGGCTTACTGTCCTTaGTGGGGCTGGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFLAYCP*WGWTEG
Trigger: GCCTTCTGTCCAGCCCCACCAAGGACAGTAAGCCAA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGATTGGCTTACTGTCCTTaGTGGGGCTGGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGLAYCP*WGWTEG
Trigger: GCCTTCTGTCCAGCCCCACCAAGGACAGTAAGCCAA...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGTTGGCTTACTGTCCTTaGTGGGGCTGGACAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLLAYCP*WGWTEG
Trigger: GCCTTCTGTCCAGCCCCACCAAGGACAGTAAGCCAA...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGGAGGCCAGGGAGATGTaGTGTGCAGAGATATTTGGC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMEAREM*CAEIFG
Trigger: GCCAAATATCTCTGCACACCACATCTCCCTGGCCTC...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTGAGGCCAGGGAGATGTaGTGTGCAGAGATATTTGGC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFEAREM*CAEIFG
Trigger: GCCAAATATCTCTGCACACCACATCTCCCTGGCCTC...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTACTCTTCACTGGGGGTaGTCAGTGCCAGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCTLHWG*SVPGRR
Trigger: CCTCCTGCCTGGCACTGACCACCCCCAGTGAAGAGT...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAGTACTTTCTGGCAGTaGCGGGGTGATGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFSTFWQ*RGDGLV
Trigger: GACAAGGCCATCACCCCGCCACTGCCAGAAAGTACT...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGAGTACTTTCTGGCAGTaGCGGGGTGATGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGESTFWQ*RGDGLV
Trigger: GACAAGGCCATCACCCCGCCACTGCCAGAAAGTACT...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTAGTACTTTCTGGCAGTaGCGGGGTGATGGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLSTFWQ*RGDGLV
Trigger: GACAAGGCCATCACCCCGCCACTGCCAGAAAGTACT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTTGCCCGGCATTGACCTaGTTGACCACAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSCPALT*LTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCA...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTTGCCCGGCATTGACCTaGTTGACCACAATGACCTCC +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSCPALT*LTTMTS
Trigger: GGAGGTCATTGTGGTCAACCAGGTCAATGCCGGGCA...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATTTATTTCCACTGGGGTaGGCAAGGTGGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNLFPLG*ARWGFQ
Trigger: CTGGAATCCCCACCTTGCCCACCCCAGTGGAAATAA...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGACCGTTATTTCCACTaGGGTGGGCAAGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGDRYFH*GGQGGD
Trigger: ATCCCCACCTTGCCCACCCCAGTGGAAATAACGGTC...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGACCGTTATTTCCACTaGGGTGGGCAAGGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFDRYFH*GGQGGD
Trigger: ATCCCCACCTTGCCCACCCCAGTGGAAATAACGGTC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGGAATCTCCACTTCGTTaGTCTCCTCGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKESPLR*SPRRRQ
Trigger: TTGCCTCCTACGAGGAGACCAACGAAGTGGAGATTC...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGCTTCCGGTGAAAACTaGTCATCGTCTGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLASGEN*SSSDRG
Trigger: GCCCCTGTCAGACGATGACCAGTTTTCACCGGAAGC...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCTTCCGGTGAAAACTaGTCATCGTCTGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGASGEN*SSSDRG
Trigger: GCCCCTGTCAGACGATGACCAGTTTTCACCGGAAGC...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTCCGTCATCTCGCTCATaGCGGCATCTGCTTCCGGTG +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCPSSRS*RHLLPV
Trigger: CACCGGAAGCAGATGCCGCCATGAGCGAGATGACGG...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCACAGAGGAAGACCAGTTaGACTGTAACTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: LYSKKFPDHSLYHTVTCPQRKTS*TVTCHL
Trigger: CAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTG...TGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACTCTCAGGAAGCAGCATaGGGGTCAAAGGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDSQEAA*GSKACV
Trigger: TACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp GGATACCAGTTCCCCTCCCCACTGACCAAGGTCAGATGTGATGACCATTTCATATTAAACACTATCCTTTaGCTTTGCGAAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: GYQFPSPLTKVRCDDHFILNTIL*LCEENP
Trigger: TGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAA...TATGAAATGGTCATCACATCTGACCTTGGTCAGTGGGGAGGGGAACTGGTATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTCAGTCTTCTTGAGACTGCAACAGCTATCCACGGAATCCATGCTGTTCCTGTCTTAAACACTATCCTTTaGCTTTGCGAAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: LSLLETATAIHGIHAVPVLNTIL*LCEENP
Trigger: TGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAA...GACAGGAACAGCATGGATTCCGTGGATAGCTGTTGCAGTCTCAAGAAGACTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp CTGAATCAGAGGAAGACCAGTTGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTTAAACACTATCCTTTaGCTTTGCGAAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: LNQRKTSWTVTCHLSKQCLNTIL*LCEENP
Trigger: TGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAA...GCACTGCTTGCTCAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTGATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp GGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCCTTCAGGTGACATGTGGCTaGAAGAATCTTGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: GEWNRGNRTIWLKLFLFLQVTCG*KNLEFP
Trigger: AGGGAACTCAAGATTCTTCCAGCCACATGTCACCTG...AAGGAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGGCCATCCTGGAGGCTTaGAGTAATTACACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMAILEA*SNYTLL
Trigger: CAGCAAGGTGTAATTACTTCAAGCCTCCAGGATGGC...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATTGTGAGCCGACTCGATaGACCTACTTGGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNCEPTR*TYLATS
Trigger: AGAAGTTGCCAAGTAGGTTCATCGAGTCGGCTCACA...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTTTGCCAGCTCTGTGTaGGCCGACTCGATGAACCTA +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFFASSV*ADSMNL
Trigger: TAGGTTCATCGAGTCGGCTCACACAGAGCTGGCAAA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTTGCCAGCTCTGTGTaGGCCGACTCGATGAACCTA +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLFASSV*ADSMNL
Trigger: TAGGTTCATCGAGTCGGCTCACACAGAGCTGGCAAA...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAAGACAGTTTTCTGGTaGACTGGGACACAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDKTVFW*TGTQLS
Trigger: AGAGAGCTGTGTCCCAGTTCACCAGAAAACTGTCTT...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGTGTCTGACATGCAGGTaGCACAGGTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLCLTCR*HRWHLP
Trigger: TGGAAGATGCCACCTGTGTCACCTGCATGTCAGACA...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTGTCTGACATGCAGGTaGCACAGGTGGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFCLTCR*HRWHLP
Trigger: TGGAAGATGCCACCTGTGTCACCTGCATGTCAGACA...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGACTTTGGCTGCTGTCTaGCATGCAGGTGACACAGGT +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGETLAAV*HAGDTG
Trigger: ACCTGTGTCACCTGCATGTCAGACAGCAGCCAAAGT...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTACTTTGGCTGCTGTCTaGCATGCAGGTGACACAGGT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSTLAAV*HAGDTG
Trigger: ACCTGTGTCACCTGCATGTCAGACAGCAGCCAAAGT...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTTCAGCACCCCATTGCTaGAGGGCACAGTACTTTCTG +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSSAPHC*RAQYFL
Trigger: CAGAAAGTACTGTGCCCTTCAGCAATGGGGTGCTGA...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTTCAGCACCCCATTGCTaGAGGGCACAGTACTTTCTG +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSSAPHC*RAQYFL
Trigger: CAGAAAGTACTGTGCCCTTCAGCAATGGGGTGCTGA...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTCAGAACCTCCTGAATaGTCTGCTTCCGCATCCATG +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMSEPPE*SASASM
Trigger: CATGGATGCGGAAGCAGATCATTCAGGAGGTTCTGA...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTCCTGTCAGAACCTCCTaGATGATCTGCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLPVRTS*MICFRI
Trigger: GATGCGGAAGCAGATCATTCAGGAGGTTCTGACAGG...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCCTGTCAGAACCTCCTaGATGATCTGCTTCCGCATC +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSPVRTS*MICFRI
Trigger: GATGCGGAAGCAGATCATTCAGGAGGTTCTGACAGG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTAAACTGGTCATCGTCTaGCAGGGGCATCACACTGTC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFKLVIV*QGHHTV
Trigger: GACAGTGTGATGCCCCTGTCAGACGATGACCAGTTT...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATACCACACTCCACAGCTaGATCAGAGGAAGACCAGTT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNTTLHS*IRGRPV
Trigger: AACTGGTCTTCCTCTGATTCAGCTGTGGAGTGTGGT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCATCCTGGAGGCTTaGAGTAATTACACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSAILEA*SNYTLP
Trigger: GGGCAAGGTGTAATTACTTCAAGCCTCCAGGATGGC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572557.5
CDS-3UTR GCA 90 bp ATATTGGTGAGGTTCAGCTCTTTGAACTTCTTCCCAATCAAGTTCAGCGCTTTGTTGTACTGTCATCTCTaGGTGTTCCTGGTCGCAATC +
Preference number: 4 (lower is better)
Translates to: ILVRFSSLNFFPIKFSALLYCHL*VFLVAI
Trigger: GATTGCGACCAGGAACACGCAGAGATGACAGTACAA...CAAAGCGCTGAACTTGATTGGGAAGAAGTTCAAAGAGCTGAACCTCACCAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACTTGTACTGTCATCTCTaGGTGTTCCTGGTCGCAATC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDLYCHL*VFLVAI
Trigger: GATTGCGACCAGGAACACGCAGAGATGACAGTACAA...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCCACCTGGGATGAGCTaGTCTTCCCCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNPPGMS*SSPYLL
Trigger: AAGAAGATAAGGGGAAGAGCAGCTCATCCCAGGTGG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTTCGAGCTGGTCTCTGTaGAAGAGTCTTCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSSSWSL*KSLQAL
Trigger: CAGGGCTTGAAGACTCTTGCACAGAGACCAGCTCGA...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTCGAGCTGGTCTCTGTaGAAGAGTCTTCAAGCCCTG +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFSSWSL*KSLQAL
Trigger: CAGGGCTTGAAGACTCTTGCACAGAGACCAGCTCGA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCTATCCACGGAATCCATaGTGTTCCTGTCAGAACCTG +
Preference number: 4 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPYPRNP*CSCQNL
Trigger: CAGGTTCTGACAGGAACAGCATGGATTCCGTGGATA...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTCTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLLRVGA*LGILEA
Trigger: AGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAG...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACTTAGGGTTGGAGCCTaGCTGGGCATTTTGGAAGCT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGLRVGA*LGILEA
Trigger: AGCTTCCAAAATGCCCAGGCAGGCTCCAACCCTAAG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGTATCCACGGAATCCATaGTGTTCCTGTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKYPRNP*CSCQNL
Trigger: GAGGTTCTGACAGGAACAGCATGGATTCCGTGGATA...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCAAGTCAGACCTGATTTaGCGGAGCACGTCTACTTTC +
Preference number: 4 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPKSDLI*RSTSTF
Trigger: GAAAGTAGACGTGCTCCGGCAAATCAGGTCTGACTT...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAAGTCAGACCTGATTTaGCGGAGCACGTCTACTTTC +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDKSDLI*RSTSTF
Trigger: GAAAGTAGACGTGCTCCGGCAAATCAGGTCTGACTT...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCACCTGAGCAAGCAGTaGTGTATTCCCCGTCATCTC +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSHLSKQ*CIPRHL
Trigger: GAGATGACGGGGAATACAGCACTGCTTGCTCAGGTG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTAAGAGCGAACGGAACTaGATTGCCATCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLKSERN*IAILEA
Trigger: AGCCTCCAGGATGGCAATCCAGTTCCGTTCGCTCTT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGAAGAGCGAACGGAACTaGATTGCCATCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEKSERN*IAILEA
Trigger: AGCCTCCAGGATGGCAATCCAGTTCCGTTCGCTCTT...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAAAGAGCGAACGGAACTaGATTGCCATCCTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGKSERN*IAILEA
Trigger: AGCCTCCAGGATGGCAATCCAGTTCCGTTCGCTCTT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTGTGGACACTACTTTaGGACAGACGTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGVWTLL*DRRLPR
Trigger: CCGTGGAAGACGTCTGTCCCAAAGTAGTGTCCACAC...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGTGTGGACACTACTTTaGGACAGACGTCTTCCACGG +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSVWTLL*DRRLPR
Trigger: CCGTGGAAGACGTCTGTCCCAAAGTAGTGTCCACAC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTGCAGCTTGCTCACGGTaGACAGTTCCTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSAACSR*TVPFLE
Trigger: CTCCAGAAAAGGAACTGTCCACCGTGAGCAAGCTGC...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCAGCTTGCTCACGGTaGACAGTTCCTTTTCTGGAG +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSAACSR*TVPFLE
Trigger: CTCCAGAAAAGGAACTGTCCACCGTGAGCAAGCTGC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACATCTCTGCGTGTTCCTaGTCGCAATCTCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDISACS*SQSHVC
Trigger: ACAGACATGAGATTGCGACCAGGAACACGCAGAGAT...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCTAGAGGAATCGATTTaGCTTCACCACCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLELEESI*LHHLSG
Trigger: CCCTGACAGGTGGTGAAGCCAAATCGATTCCTCTAG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCTAGAGGAATCGATTTaGCTTCACCACCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFLEESI*LHHLSG
Trigger: CCCTGACAGGTGGTGAAGCCAAATCGATTCCTCTAG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTACAGCAAAAAGTTCCCAGATCACAGTCTCTACCATACAGTCACCTGTCCAGCTCGATGAACCTACTTaGCAACTTCTCTGCTACATA +
Preference number: 4 (lower is better)
Translates to: CTAKSSQITVSTIQSPVQLDEPT*QLLCYI
Trigger: TATGTAGCAGAGAAGTTGCCAAGTAGGTTCATCGAG...CTGGACAGGTGACTGTATGGTAGAGACTGTGATCTGGGAACTTTTTGCTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTTGTCCTTGGTGGGGCTaGACAGAAGGCTCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCCPWWG*TEGSSG
Trigger: GCCTGAAGAGCCTTCTGTCCAGCCCCACCAAGGACA...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACGTGTGCAGAGATATTTaGCTTACTGTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDVCRDI*LTVLGG
Trigger: CCCACCAAGGACAGTAAGCCAAATATCTCTGCACAC...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGAGGCCAGGGAGATGTaGTGTGCAGAGATATTTGGC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEEAREM*CAEIFG
Trigger: GCCAAATATCTCTGCACACCACATCTCCCTGGCCTC...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATACCAAAGGGACACTTTaGCTGCTGTCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNTKGTL*LLSDMQ
Trigger: CTGCATGTCAGACAGCAGCCAAAGTGTCCCTTTGGT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCTGAACTGTCTACGCTaGGGTCAGCACTCGAAAAAC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMLNCLR*GQHSKN
Trigger: GTTTTTCGAGTGCTGACCCCAGCGTAGACAGTTCAG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR CCA 90 bp AGATCTTGGCACCAGATGTTTGCTTCAGAAAACTCACATAGCGCCCCTGCTTGCTTGAAATGTAGATCTTaGCACCAGATGTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: RSWHQMFASENSHSAPACLKCRS*HQMFAS
Trigger: TGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA...GCAAGCAGGGGCGCTATGTGAGTTTTCTGAAGCAAACATCTGGTGCCAAGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314126.4
ENST00000481416.5
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGATTATTTCCACTGGGGTaGGCAAGGTGGGGATTCCAG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGLFPLG*ARWGFQ
Trigger: CTGGAATCCCCACCTTGCCCACCCCAGTGGAAATAA...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGGAATCTCCACTTCGTTaGTCTCCTCGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEESPLR*SPRRRQ
Trigger: TTGCCTCCTACGAGGAGACCAACGAAGTGGAGATTC...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCAGAGGAAGACCAGTTaGACTGTAACTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDQRKTS*TVTCHL
Trigger: CAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTCTCAGGAAGCAGCATaGGGGTCAAAGGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLESQEAA*GSKACV
Trigger: TACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TGGACTGTAACTTGTCACCTGAGCAAGCAGTGCTGTATTCCCCGTCATCTCGCTAAAGAAAGGACTTTCTaGAGAGGACAATGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: WTVTCHLSKQCCIPRHLAKERTF*RGQCLL
Trigger: TAACAAACATTGTCCTCTCCAGAAAGTCCTTTCTTT...AGCGAGATGACGGGGAATACAGCACTGCTTGCTCAGGTGACAAGTTACAGTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481416.5
ENST00000573326.1
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCAGGAATCAGAGTGCTaGAGCCATGGCTCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEQESEC*SHGSGV
Trigger: AACACCTGAGCCATGGCTCCAGCACTCTGATTCCTG...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCCATCCTGGAGGCTTaGAGTAATTACACCTTGCTG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGAILEA*SNYTLL
Trigger: CAGCAAGGTGTAATTACTTCAAGCCTCCAGGATGGC...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGATGTGAGCCGACTCGATaGACCTACTTGGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGCEPTR*TYLATS
Trigger: AGAAGTTGCCAAGTAGGTTCATCGAGTCGGCTCACA...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTGTGAGCCGACTCGATaGACCTACTTGGCAACTTCT +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFCEPTR*TYLATS
Trigger: AGAAGTTGCCAAGTAGGTTCATCGAGTCGGCTCACA...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCTGTTCGGTTGCTTCTaGGATCACTTGGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDLFGCF*DHLGDY
Trigger: ATAATCTCCCAAGTGATCTCAGAAGCAACCGAACAG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCTGTTCGGTTGCTTCTaGGATCACTTGGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKLFGCF*DHLGDY
Trigger: ATAATCTCCCAAGTGATCTCAGAAGCAACCGAACAG...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTAAGACAGTTTTCTGGTaGACTGGGACACAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFKTVFW*TGTQLS
Trigger: AGAGAGCTGTGTCCCAGTTCACCAGAAAACTGTCTT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAAGACAGTTTTCTGGTaGACTGGGACACAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEKTVFW*TGTQLS
Trigger: AGAGAGCTGTGTCCCAGTTCACCAGAAAACTGTCTT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGAGTGCTGAAAGAATCTaGGCAGTGTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGESAERI*AVSWRS
Trigger: GCTTCTCCAGGACACTGCTCAGATTCTTTCAGCACT...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAAGTGCTGAAAGAATCTaGGCAGTGTCCTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGSAERI*AVSWRS
Trigger: GCTTCTCCAGGACACTGCTCAGATTCTTTCAGCACT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGCTCTCAGTCTTCTTaGGACTGCAACAGCTATCCA +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLESSQSS*DCNSYP
Trigger: TGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATAGCTCTCAGTCTTCTTaGGACTGCAACAGCTATCCA +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNSSQSS*DCNSYP
Trigger: TGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSGVRQG*NVDLGT
Trigger: GGTGCCAAGATCTACATTTCAACCCTGCCTTACACC...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGGTGTAAGGCAGGGTTaGAATGTAGATCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFGVRQG*NVDLGT
Trigger: GGTGCCAAGATCTACATTTCAACCCTGCCTTACACC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTCAGAACCTCCTGAATaGTCTGCTTCCGCATCCATG +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFSEPPE*SASASM
Trigger: CATGGATGCGGAAGCAGATCATTCAGGAGGTTCTGA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCAGAACCTCCTGAATaGTCTGCTTCCGCATCCATG +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLSEPPE*SASASM
Trigger: CATGGATGCGGAAGCAGATCATTCAGGAGGTTCTGA...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATACTTCTACCTACAGGTaGCATGTGGCTGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNTSTYR*HVAGRI
Trigger: GATTCTTCCAGCCACATGTCACCTGTAGGTAGAAGT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTTGTACTGTCATCTCTaGGTGTTCCTGGTCGCAATC +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMLYCHL*VFLVAI
Trigger: GATTGCGACCAGGAACACGCAGAGATGACAGTACAA...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGTCCAATTCCAAGACATaGTCCCGAGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLESNSKT*SRDNRA
Trigger: AGCTCTGTTGTCTCGGGAGCATGTCTTGGAATTGGA...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATTCCAATTCCAAGACATaGTCCCGAGACAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNSNSKT*SRDNRA
Trigger: AGCTCTGTTGTCTCGGGAGCATGTCTTGGAATTGGA...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCCCACCTGGGATGAGCTaGTCTTCCCCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFPPGMS*SSPYLL
Trigger: AAGAAGATAAGGGGAAGAGCAGCTCATCCCAGGTGG...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTCCACCTGGGATGAGCTaGTCTTCCCCTTATCTTCTT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSPPGMS*SSPYLL
Trigger: AAGAAGATAAGGGGAAGAGCAGCTCATCCCAGGTGG...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCACTTGGCAACTTCTCTaGTACATACTCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPTWQLL*YILFLL
Trigger: CAGGAGGAAGAGTATGTAGCAGAGAAGTTGCCAAGT...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTCATAGCGCCCCTGCTTaGCAATTAGCCGACCGACTA +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCHSAPA*QLADRL
Trigger: TAGTCGGTCGGCTAATTGGCAAGCAGGGGCGCTATG...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAAGTCAGACCTGATTTaGCGGAGCACGTCTACTTTC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEKSDLI*RSTSTF
Trigger: GAAAGTAGACGTGCTCCGGCAAATCAGGTCTGACTT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTAAGTCAGACCTGATTTaGCGGAGCACGTCTACTTTC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFKSDLI*RSTSTF
Trigger: GAAAGTAGACGTGCTCCGGCAAATCAGGTCTGACTT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGAAGTAATTACACCTTaGCCCTCACCTCTGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSEVITP*PSPLAL
Trigger: CAAGGCCAGAGGTGAGGGGCAAGGTGTAATTACTTC...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572557.5
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGTAATTACACCTTGCTaGGTAGTGCTCGGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEVITPC*VVLGSA
Trigger: GGCAGAACCGAGCACTACCCAGCAAGGTGTAATTAC...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTATCTCTGCGTGTTCCTaGTCGCAATCTCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFISACS*SQSHVC
Trigger: ACAGACATGAGATTGCGACCAGGAACACGCAGAGAT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGATCTCTGCGTGTTCCTaGTCGCAATCTCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMISACS*SQSHVC
Trigger: ACAGACATGAGATTGCGACCAGGAACACGCAGAGAT...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCCTAGAGGAATCGATTTaGCTTCACCACCTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFLEESI*LHHLSG
Trigger: CCCTGACAGGTGGTGAAGCCAAATCGATTCCTCTAG...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTTCGACACCTCTATCCTaGGCTTTGGCGTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCSTPLS*ALASAT
Trigger: AGTCGCAGACGCCAAAGCCCAGGATAGAGGTGTCGA...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGACTTGGGAGATTATCTaGAAGGCAGCCCGCTTAATC +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLETWEII*KAARLI
Trigger: GATTAAGCGGGCTGCCTTCCAGATAATCTCCCAAGT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTACTTGGGAGATTATCTaGAAGGCAGCCCGCTTAATC +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFTWEII*KAARLI
Trigger: GATTAAGCGGGCTGCCTTCCAGATAATCTCCCAAGT...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACGCTTCTGAGATCACTTaGGAGATTATCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDASEIT*EIIWKA
Trigger: TGCCTTCCAGATAATCTCCCAAGTGATCTCAGAAGC...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAAATAGAAAATGGTTACAAATTACAACCAGGCTTGGCAGGATACCAGTTCCCCGCTTCTGAGATCACTTaGGAGATTATCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: QIENGYKLQPGLAGYQFPASEIT*EIIWKA
Trigger: TGCCTTCCAGATAATCTCCCAAGTGATCTCAGAAGC...GGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATTTGTAACCATTTTCTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTGTGTGCAGAGATATTTaGCTTACTGTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFVCRDI*LTVLGG
Trigger: CCCACCAAGGACAGTAAGCCAAATATCTCTGCACAC...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGTGTGCAGAGATATTTaGCTTACTGTCCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNVCRDI*LTVLGG
Trigger: CCCACCAAGGACAGTAAGCCAAATATCTCTGCACAC...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAACCAAAGGGACACTTTaGCTGCTGTCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGTKGTL*LLSDMQ
Trigger: CTGCATGTCAGACAGCAGCCAAAGTGTCCCTTTGGT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGACCAAAGGGACACTTTaGCTGCTGTCTGACATGCAG +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGETKGTL*LLSDMQ
Trigger: CTGCATGTCAGACAGCAGCCAAAGTGTCCCTTTGGT...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTGAATCTCCACTTCGTTaGTCTCCTCGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLESPLR*SPRRRQ
Trigger: TTGCCTCCTACGAGGAGACCAACGAAGTGGAGATTC...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGAATCTCCACTTCGTTaGTCTCCTCGTAGGAGGCAA +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFESPLR*SPRRRQ
Trigger: TTGCCTCCTACGAGGAGACCAACGAAGTGGAGATTC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCAGAGGAAGACCAGTTaGACTGTAACTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMQRKTS*TVTCHL
Trigger: CAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGCAGAGGAAGACCAGTTaGACTGTAACTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLEQRKTS*TVTCHL
Trigger: CAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTG...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCAGAGGAAGACCAGTTaGACTGTAACTTGTCACCTG +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNQRKTS*TVTCHL
Trigger: CAGGTGACAAGTTACAGTCCAACTGGTCTTCCTCTG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGTCTCAGGAAGCAGCATaGGGGTCAAAGGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGESQEAA*GSKACV
Trigger: TACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTCTCAGGAAGCAGCATaGGGGTCAAAGGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFSQEAA*GSKACV
Trigger: TACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGTCTCAGGAAGCAGCATaGGGGTCAAAGGCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLSQEAA*GSKACV
Trigger: TACACAAGCCTTTGACCCCCATGCTGCTTCCTGAGA...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATAATTACAACCAGGCTTaGCAGGATACCAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNNYNQA*QDTSSP
Trigger: AGGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCAGGTGACATGTGGCTaGAAGAATCTTGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFQVTCG*KNLEFP
Trigger: AGGGAACTCAAGATTCTTCCAGCCACATGTCACCTG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTAAGACAGTTTTCTGGTaGACTGGGACACAGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSKTVFW*TGTQLS
Trigger: AGAGAGCTGTGTCCCAGTTCACCAGAAAACTGTCTT...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAGCTCTCAGTCTTCTTaGGACTGCAACAGCTATCCA +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFSSQSS*DCNSYP
Trigger: TGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCT...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTAGCTCTCAGTCTTCTTaGGACTGCAACAGCTATCCA +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSSSQSS*DCNSYP
Trigger: TGGATAGCTGTTGCAGTCTCAAGAAGACTGAGAGCT...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACTGTTCATCTTTGACTTaGGTGCCAAGCCCAATTTCA +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDCSSLT*VPSPIS
Trigger: TGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACA...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTCCGATGTTCATCTTTaGCTTGAGTGCCAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFSDVHL*LECQAQ
Trigger: TTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGAGTCACAGTAAGCTATaGCTTCATGTGGGTACCCTA +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMSHSKL*LHVGTL
Trigger: TAGGGTACCCACATGAAGTCATAGCTTACTGTGACT...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481416.5
CDS-3UTR GCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGTTGTACTGTCATCTCTaGGTGTTCCTGGTCGCAATC +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGELYCHL*VFLVAI
Trigger: GATTGCGACCAGGAACACGCAGAGATGACAGTACAA...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGACACCTCAGCTGATTTaGTGGAGAATAGTACACCCT +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMTPQLI*WRIVHP
Trigger: AGGGTGTACTATTCTCCAGCAAATCAGCTGAGGTGT...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACTGAAGGGGGAATCTTaGTTACACACCTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGLKGES*LHTSAD
Trigger: ATCAGCTGAGGTGTGTAAGCAAGATTCCCCCTTCAG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGAAGGGGGAATCTTaGTTACACACCTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFLKGES*LHTSAD
Trigger: ATCAGCTGAGGTGTGTAAGCAAGATTCCCCCTTCAG...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTCTGAAGGGGGAATCTTaGTTACACACCTCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSLKGES*LHTSAD
Trigger: ATCAGCTGAGGTGTGTAAGCAAGATTCCCCCTTCAG...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATACTTGGCAACTTCTCTaGTACATACTCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNTWQLL*YILFLL
Trigger: CAGGAGGAAGAGTATGTAGCAGAGAAGTTGCCAAGT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGACTTGGCAACTTCTCTaGTACATACTCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RNVFSIGLQYGERKDFLETWQLL*YILFLL
Trigger: CAGGAGGAAGAGTATGTAGCAGAGAAGTTGCCAAGT...CTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTATCCACGGAATCCATaGTGTTCCTGTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFYPRNP*CSCQNL
Trigger: GAGGTTCTGACAGGAACAGCATGGATTCCGTGGATA...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGTATCCACGGAATCCATaGTGTTCCTGTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLYPRNP*CSCQNL
Trigger: GAGGTTCTGACAGGAACAGCATGGATTCCGTGGATA...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp GACTTTCTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTTATCCACGGAATCCATaGTGTTCCTGTCAGAACCTC +
Preference number: 4 (lower is better)
Translates to: DFLERTMFVIPMFIFDLSYPRNP*CSCQNL
Trigger: GAGGTTCTGACAGGAACAGCATGGATTCCGTGGATA...ACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAGAAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGCCAAGAGCAGAAGCTaGACTGCAGAGTTTACTTCT +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLAKSRS*TAEFTS
Trigger: AGAAGTAAACTCTGCAGTGCAGCTTCTGCTCTTGGC...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAATCTCTGCGTGTTCCTaGTCGCAATCTCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGISACS*SQSHVC
Trigger: ACAGACATGAGATTGCGACCAGGAACACGCAGAGAT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTATCTCTGCGTGTTCCTaGTCGCAATCTCATGTCTGT +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLISACS*SQSHVC
Trigger: ACAGACATGAGATTGCGACCAGGAACACGCAGAGAT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTCCTCAGCTGATTTGCTaGAGAATAGTACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFPQLIC*RIVHPL
Trigger: CAAAGGGTGTACTATTCTCCAGCAAATCAGCTGAGG...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATCCTCAGCTGATTTGCTaGAGAATAGTACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNPQLIC*RIVHPL
Trigger: CAAAGGGTGTACTATTCTCCAGCAAATCAGCTGAGG...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTGGAGAGGACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCTCGATGAACCTACTTaGCAACTTCTCTGCTACATA +
Preference number: 4 (lower is better)
Translates to: LERTMFVIPMFIFDLSAKLDEPT*QLLCYI
Trigger: TATGTAGCAGAGAAGTTGCCAAGTAGGTTCATCGAG...CTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGTCCTCTCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACCTCGATGAACCTACTTaGCAACTTCTCTGCTACATA +
Preference number: 4 (lower is better)
Translates to: CLLNRTTVWRKKGLSGEDLDEPT*QLLCYI
Trigger: TATGTAGCAGAGAAGTTGCCAAGTAGGTTCATCGAG...GTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTACTTGGGAGATTATCTaGAAGGCAGCCCGCTTAATC +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLTWEII*KAARLI
Trigger: GATTAAGCGGGCTGCCTTCCAGATAATCTCCCAAGT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGACTTGGGAGATTATCTaGAAGGCAGCCCGCTTAATC +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLTWEII*KAARLI
Trigger: GATTAAGCGGGCTGCCTTCCAGATAATCTCCCAAGT...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCTTCTGAGATCACTTaGGAGATTATCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNASEIT*EIIWKA
Trigger: TGCCTTCCAGATAATCTCCCAAGTGATCTCAGAAGC...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTAGCAACATACATCCCTaGCCTGTCTGCCAGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSSNIHP*PVCQFV
Trigger: AACAAACTGGCAGACAGGCCAGGGATGTATGTTGCT...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTAATTACAACCAGGCTTaGCAGGATACCAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSNYNQA*QDTSSP
Trigger: AGGGGAACTGGTATCCTGCCAAGCCTGGTTGTAATT...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACAGGTGACATGTGGCTaGAAGAATCTTGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGQVTCG*KNLEFP
Trigger: AGGGAACTCAAGATTCTTCCAGCCACATGTCACCTG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR TCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCCTGTTCGGTTGCTTCTaGGATCACTTGGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFLFGCF*DHLGDY
Trigger: ATAATCTCCCAAGTGATCTCAGAAGCAACCGAACAG...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTCTGTTCGGTTGCTTCTaGGATCACTTGGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLLFGCF*DHLGDY
Trigger: ATAATCTCCCAAGTGATCTCAGAAGCAACCGAACAG...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATTGTTCATCTTTGACTTaGGTGCCAAGCCCAATTTCA +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNCSSLT*VPSPIS
Trigger: TGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACA...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CTTGTTAAACACTATCCTTTGGCTTTGCGAAGAGAACCCATAGTTCCATCCTTTTGTTCATCTTTGACTTaGGTGCCAAGCCCAATTTCA +
Preference number: 4 (lower is better)
Translates to: LVKHYPLALRREPIVPSFCSSLT*VPSPIS
Trigger: TGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACA...AAAGGATGGAACTATGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR GCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTGAAGTAATTACACCTTaGTGGGTAGTGCTCGGTTCT +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFEVITP*WVVLGS
Trigger: AGAACCGAGCACTACCCAGCAAGGTGTAATTACTTC...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000481416.5
ENST00000539273.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGACACCTCAGCTGATTTaGTGGAGAATAGTACACCCT +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLTPQLI*WRIVHP
Trigger: AGGGTGTACTATTCTCCAGCAAATCAGCTGAGGTGT...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTACACCTCAGCTGATTTaGTGGAGAATAGTACACCCT +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSTPQLI*WRIVHP
Trigger: AGGGTGTACTATTCTCCAGCAAATCAGCTGAGGTGT...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTACTTGGCAACTTCTCTaGTACATACTCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLTWQLL*YILFLL
Trigger: CAGGAGGAAGAGTATGTAGCAGAGAAGTTGCCAAGT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR GCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGACTTGGCAACTTCTCTaGTACATACTCTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLTWQLL*YILFLL
Trigger: CAGGAGGAAGAGTATGTAGCAGAGAAGTTGCCAAGT...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTACCTGCTGCTCATCATaGCTGCTGACATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCTCCSS*LLTWPF
Trigger: AAAAGGCCATGTCAGCAGCCATGATGAGCAGCAGGT...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGACCTCAGCTGATTTGCTaGAGAATAGTACACCCTTTG +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGPQLIC*RIVHPL
Trigger: CAAAGGGTGTACTATTCTCCAGCAAATCAGCTGAGG...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp TTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATGCTCGATGAACCTACTTaGCAACTTCTCTGCTACATA +
Preference number: 4 (lower is better)
Translates to: FSIGLQYGERKDFLERTMLDEPT*QLLCYI
Trigger: TATGTAGCAGAGAAGTTGCCAAGTAGGTTCATCGAG...CATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGCTTCTGAGATCACTTaGGAGATTATCTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGEASEIT*EIIWKA
Trigger: TGCCTTCCAGATAATCTCCCAAGTGATCTCAGAAGC...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000621116.4
CDS-3UTR TCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGTGTTCATCTTTGACTTaGGTGCCAAGCCCAATTTCA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGECSSLT*VPSPIS
Trigger: TGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACA...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR TCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTACTTCTACCTACAGGTaGCATGTGGCTGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCTSTYR*HVAGRI
Trigger: GATTCTTCCAGCCACATGTCACCTGTAGGTAGAAGT...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTTTGTACTGTCATCTCTaGGTGTTCCTGGTCGCAATC +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCLYCHL*VFLVAI
Trigger: GATTGCGACCAGGAACACGCAGAGATGACAGTACAA...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp AGAGGGGAATGGAACAGGGGGAATAGGACAATCTGGTTGAAACTGTTTCTATTCAAAGAAAGGACTTTCTaGAGAGGACAATGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: RGEWNRGNRTIWLKLFLFKERTF*RGQCLL
Trigger: TAACAAACATTGTCCTCTCCAGAAAGTCCTTTCTTT...GAATAGAAACAGTTTCAACCAGATTGTCCTATTCCCCCTGTTCCATTCCCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR GCA 90 bp CAACTCATTTATGTAAGCTGTACAAGTAGTGGATACCAATTAGTCAGTTCATGTACACCTCAGCTGATTTaGTGGAGAATAGTACACCCT +
Preference number: 4 (lower is better)
Translates to: QLIYVSCTSSGYQLVSSCTPQLI*WRIVHP
Trigger: AGGGTGTACTATTCTCCAGCAAATCAGCTGAGGTGT...ACATGAACTGACTAATTGGTATCCACTACTTGTACAGCTTACATAAATGAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATTTGAAATGTAGATCTTaGCACCAGATGTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNLKCRS*HQMFAS
Trigger: TGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTTTAAACACTATCCTTTaGCTTTGCGAAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSLNTIL*LCEENP
Trigger: TGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAA...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTTAAACACTATCCTTTaGCTTTGCGAAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFLNTIL*LCEENP
Trigger: TGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGTTAAACACTATCCTTTaGCTTTGCGAAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: KCLLNRTTVWRKKGLSGELNTIL*LCEENP
Trigger: TGGGTTCTCTTCGCAAAGCCAAAGGATAGTGTTTAA...CTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACAATGTTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCTTGAAATGTAGATCTTaGCACCAGATGTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TMFVIPMFIFDLSAKPNFLKCRS*HQMFAS
Trigger: TGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA...GAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAACATTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTTTGAAATGTAGATCTTaGCACCAGATGTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFLKCRS*HQMFAS
Trigger: TGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TTTGTTATTCCGATGTTCATCTTTGACTTGAGTGCCAAGCCCAATTTCAACAGTTTGAAATGTAGATCTTaGCACCAGATGTTTGCTTCA +
Preference number: 4 (lower is better)
Translates to: FVIPMFIFDLSAKPNFNSLKCRS*HQMFAS
Trigger: TGAAGCAAACATCTGGTGCCAAGATCTACATTTCAA...ACTGTTGAAATTGGGCTTGGCACTCAAGTCAAAGATGAACATCGGAATAACAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATAAAGAAAGGACTTTCTaGAGAGGACAATGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNKERTF*RGQCLL
Trigger: TAACAAACATTGTCCTCTCCAGAAAGTCCTTTCTTT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAGAGGACAATAATAGGACTACAGTATaGAGAAAGAAAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: LLNRTTVWRKKGLSGEDNNRTTV*RKKGLS
Trigger: AGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATT...ATTGTCCTCTCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp AGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGAAAGAAAGGACTTTCTaGAGAGGACAATGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: RRNVFSIGLQYGERKDFLKERTF*RGQCLL
Trigger: TAACAAACATTGTCCTCTCCAGAAAGTCCTTTCTTT...CAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp ACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTCTGGAAAAGAAAGGACTTTCTaGAGAGGACAATGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: TKCLLNRTTVWRKKGLSGKERTF*RGQCLL
Trigger: TAACAAACATTGTCCTCTCCAGAAAGTCCTTTCTTT...TCCAGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp CAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTTAATAGGACTACAGTATaGAGAAAGAAAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: QRRNVFSIGLQYGERKDFNRTTV*RKKGLS
Trigger: AGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATT...AAAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS-3UTR CCA 90 bp TCAGAGACGAAATGTCTTCTCAATAGGACTACAGTATGGAGAAAGAAAGGACTTAATAGGACTACAGTATaGAGAAAGAAAGGACTTTCT +
Preference number: 4 (lower is better)
Translates to: SETKCLLNRTTVWRKKGLNRTTV*RKKGLS
Trigger: AGAAAGTCCTTTCTTTCTCCATACTGTAGTCCTATT...AAGTCCTTTCTTTCTCCATACTGTAGTCCTATTGAGAAGACATTTCGTCTCTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337714.8
ENST00000481416.5
ENST00000539273.5
ENST00000572557.5
ENST00000573326.1
ENST00000621116.4
CDS CCA 90 bp TGGATCACAACCGGCCGATGTCCCGGCCCATCTTCCCAGTTCCCCTaGCTCGCCGCACGGAACTCCCAGGGGCTGCGCCGGCGGGCGAGC +
Preference number: 5 (lower is better)
Translates to: WITTGRCPGPSSQFP*LAARNSQGLRRRAS
Trigger: GCTCGCCCGCCGGCGCAGCCCCTGGGAGTTCCGTGCGGCGAGCCAGGGGAACTGGGAAGATGGGCCGGGACATCGGCCGGTTGTGATCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570423.5
ENST00000573085.1
ENST00000575186.5
ENST00000621116.4
CDS GCA 90 bp CATCTTCCCAGTTCCCCTGGCTCGCCGCACGGAACTCCCAGGGGCTaGGCCGGCGGGCGAGCCGAGGGTGAGAAGTTGGGCGAGGCTCCA +
Preference number: 5 (lower is better)
Translates to: HLPSSPGSPHGTPRG*AGGRAEGEKLGEAP
Trigger: TGGAGCCTCGCCCAACTTCTCACCCTCGGCTCGCCCGCCGGCGCAGCCCCTGGGAGTTCCGTGCGGCGAGCCAGGGGAACTGGGAAGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570423.5
ENST00000573085.1
ENST00000575186.5
ENST00000621116.4
CDS TCA 90 bp GCCAAGGGGAAGAGCGAACGGAACTGGATTGCCATCCTGGAGGCTTaGAGTAATTACACCTGCGCGTGCGCGCCGCCGGCCGCTCCCGGC +
Preference number: 5 (lower is better)
Translates to: AKGKSERNWIAILEA*SNYTCACAPPAAPG
Trigger: GCCGGGAGCGGCCGGCGGCGCGCACGCGCAGGTGTAATTACTTCAAGCCTCCAGGATGGCAATCCAGTTCCGTTCGCTCTTCCCCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575322.1
CDS CCA 90 bp CAGACTGTGTACACACGACCTTTGAAAAGTAAACGCCCGCGGGGCTaGGCGACCTTGGGTGGGACGCGCTCGGGTCAGCCTCGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: QTVYTRPLKSKRPRG*ATLGGTRSGQPRRR
Trigger: CCGCCTGCGAGGCTGACCCGAGCGCGTCCCACCCAAGGTCGCCCAGCCCCGCGGGCGTTTACTTTTCAAAGGTCGTGTGTACACAGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000570423.5
ENST00000573085.1
ENST00000575186.5
ENST00000621116.4