RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AJUBA (Homo sapiens)

Ensembl gene IDs: ENSG00000129474

Ensembl transcript IDs: ENST00000262713.7, ENST00000361265.8, ENST00000397388.7, ENST00000553592.5, ENST00000553736.1, ENST00000553911.1, ENST00000555479.1, ENST00000556731.5

Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTaGCAGGCCTGCAGAGTGCATTCTTTGCCTTGGCTGGCCTCAGAG +
Preference number: 1 (lower is better)
Translates to: IFGSPALGVLPRGLF*QACRVHSLPWLASE
Trigger: CTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR CCA 90 bp CTGCAGAGTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTaGCCACAGCAGTTTGTCTGCAGGGTGACAGCAGCAGCAGTGATT +
Preference number: 1 (lower is better)
Translates to: LQSAFFALAGLRGAH*PQQFVCRVTAAAVI
Trigger: AATCACTGCTGCTGCTGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR TCA 90 bp CTGGTAAATATAAGGTTTCTCTTCCACAATCCATTTGGAATATCATaGTCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCT +
Preference number: 1 (lower is better)
Translates to: LVNIRFLFHNPFGIS*SLGLRPLGSSPEDS
Trigger: AGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAGAGAAACCTTATATTTACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR GCA 90 bp TATCTGACACCATGTGTCACAAAAAGTGAGGAGCTTAAATTTGGTTaGCTAGCAGGAACTCACCACCCTAGACTTGCTACCTCTCAGGGA +
Preference number: 1 (lower is better)
Translates to: YLTPCVTKSEELKFG*LAGTHHPRLATSQG
Trigger: TCCCTGAGAGGTAGCAAGTCTAGGGTGGTGAGTTCCTGCTAGGCAACCAAATTTAAGCTCCTCACTTTTTGTGACACATGGTGTCAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR TCA 90 bp GAGTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTaGCACCATGTGTCACAAAAAGTGAGGAGCTTAAATTTGGTTGCC +
Preference number: 1 (lower is better)
Translates to: EFLPLHPDIGAGPHI*HHVSQKVRSLNLVA
Trigger: GGCAACCAAATTTAAGCTCCTCACTTTTTGTGACACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR CCA 90 bp AACACAGCACCACTACCTAAGGAAACCTGGAGAAAGTCGAAGATATaGTCCCTGGCATTCAGATGCTTAGTTTCTGTTGGGGAGAAAAGA +
Preference number: 1 (lower is better)
Translates to: NTAPLPKETWRKSKI*SLAFRCLVSVGEKR
Trigger: TCTTTTCTCCCCAACAGAAACTAAGCATCTGAATGCCAGGGACCATATCTTCGACTTTCTCCAGGTTTCCTTAGGTAGTGGTGCTGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
3UTR CCA 90 bp TTCCCTCTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTaGCATAGTCACCTTAGAATAGCCCCCAAATGTGGAAATTCTGTT +
Preference number: 1 (lower is better)
Translates to: FPLTQRSLLCISQVG*HSHLRIAPKCGNSV
Trigger: AACAGAATTTCCACATTTGGGGGCTATTCTAAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAGAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262713.7
3UTR-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCTCAGAGGGGCCCACTaGCCACAGCAGTTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: FGSPALGVLPRGLFCQACLRGAH*PQQFVC
Trigger: GCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCATTCTTTGCCTTGGCTaGCCTCAGAGGGGCCCACTG +
Preference number: 2 (lower is better)
Translates to: FGSPALGVLPRGLFCQACILCLG*PQRGPL
Trigger: CAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAAT...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGCTCAGAGGGGCCCACTaGCCACAGCAGTTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWLRGAH*PQQFVC
Trigger: GCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAG...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGTGGGTCTCCGGCCCTTaGGGTCCTCCCCAGAGGACT +
Preference number: 2 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQWVSGP*GPPQRT
Trigger: AGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCA...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR CCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCGTGCATTCTTTGCCTTaGCTGGCCTCAGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPVHSLP*LASEGP
Trigger: GGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR GCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGCCCAGAGGACTCTTCTaGCAGGCCTGCAGAGTGCAT +
Preference number: 2 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQPRGLF*QACRVH
Trigger: ATGCACTCTGCAGGCCTGGCAGAAGAGTCCTCTGGG...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR CCA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTTGGGTCTCCGGCCCTTaGGGTCCTCCCCAGAGGACT +
Preference number: 2 (lower is better)
Translates to: KASRPHPGKYKVSLPQSIWVSGP*GPPQRT
Trigger: AGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCA...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCGGGGTTTGGGGGAGCTaGAGGGAGAATTACACTTTG +
Preference number: 2 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFGVWGS*RENYTL
Trigger: CAAAGTGTAATTCTCCCTCCAGCTCCCCCAAACCCC...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR GCA 90 bp AGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGAGCAGAGTGCATTCTTTaGCTTGGCTGGCCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: RNREYRQQPHSELVPILRAECIL*LGWPQR
Trigger: CCTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGC...TCTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR CCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCGTGCATTCTTTGCCTTaGCTGGCCTCAGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVVHSLP*LASEGP
Trigger: GGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CCA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGATGGGTCTCCGGCCCTTaGGGTCCTCCCCAGAGGACT +
Preference number: 2 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPRWVSGP*GPPQRT
Trigger: AGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCA...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR GCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCCCAGAGGACTCTTCTaGCAGGCCTGCAGAGTGCAT +
Preference number: 2 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVPRGLF*QACRVH
Trigger: ATGCACTCTGCAGGCCTGGCAGAAGAGTCCTCTGGG...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAATTCTTTGCCTTGGCTaGCCTCAGAGGGGCCCACTG +
Preference number: 2 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQILCLG*PQRGPL
Trigger: CAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAAT...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGTTTGGGAGGCCAAGGTaGGAGGATCATTCGAGCCCA +
Preference number: 2 (lower is better)
Translates to: TYLASPDPCKFLRNREYRFGRPR*EDHSSP
Trigger: TGGGCTCGAATGATCCTCCCACCTTGGCCTCCCAAA...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR GCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCCACAGCAGTTTGTCTaGAGGGTGACAGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVPQQFV*RVTAAA
Trigger: TGCTGCTGCTGTCACCCTGCAGACAAACTGCTGTGG...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR GCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCGAGCTTAAATTTGGTTaGCTAGCAGGAACTCACCAC +
Preference number: 2 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFELKFG*LAGTHH
Trigger: GTGGTGAGTTCCTGCTAGGCAACCAAATTTAAGCTC...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR CCA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTCTCAGAGGGGCCCACTaGCCACAGCAGTTTGTCTGC +
Preference number: 2 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLLRGAH*PQQFVC
Trigger: GCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAG...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
3UTR-3UTR CCA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTGTGCATTCTTTGCCTTaGCTGGCCTCAGAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLVHSLP*LASEGP
Trigger: GGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
3UTR-3UTR CCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGGAATATCATGATCTTTaGGTCTCCGGCCCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: TYLASPDPCKFLRNREYREYHDL*VSGPWG
Trigger: ACCCCAAGGGCCGGAGACCCAAAGATCATGATATTC...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR GCA 90 bp ACACAGCACCACTACCTAAGGAAACCTGGAGAAAGTCGAAGATATGGTCCCTGGATGAACGGTCAAAGATaGCAGTCCACAGGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: TQHHYLRKPGESRRYGPWMNGQR*QSTGAQ
Trigger: CTGAGCACCTGTGGACTGGCATCTTTGACCGTTCAT...CCAGGGACCATATCTTCGACTTTCTCCAGGTTTCCTTAGGTAGTGGTGCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553736.1
3UTR-3UTR CCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAGAATATCATGATCTTTaGGTCTCCGGCCCTTGGGGT +
Preference number: 2 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQEYHDL*VSGPWG
Trigger: ACCCCAAGGGCCGGAGACCCAAAGATCATGATATTC...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR CAA 90 bp GATGAACGGTCAAAGATGCCAGTCCACAGGTGCTCAGCAGCAGACTaGAAAATACTTTCTAGAGAAAGCAGGCTAGGCCCAGAAATCGTC +
Preference number: 2 (lower is better)
Translates to: DERSKMPVHRCSAAD*KILSRESRLGPEIV
Trigger: GACGATTTCTGGGCCTAGCCTGCTTTCTCTAGAAAGTATTTTCAAGTCTGCTGCTGAGCACCTGTGGACTGGCATCTTTGACCGTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
3UTR-3UTR TCA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTCCATTTGGAATATCATaGTCTTTGGGTCTCCGGCCC +
Preference number: 2 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCPFGIS*SLGLRP
Trigger: GGGCCGGAGACCCAAAGATCATGATATTCCAAATGG...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR TCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCGGGAGAATTACACTTTaGTTTGGTTCTAGTCAGTTT +
Preference number: 2 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFGRITL*FGSSQF
Trigger: AAACTGACTAGAACCAAATCAAAGTGTAATTCTCCC...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR GCA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGAGAACCCTCCTGTGTGTaGCTAAGCTCAGACTGCACA +
Preference number: 2 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPREPSCV*LSSDCT
Trigger: TGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR CCA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGAAACCCCACTCAGAGCTaGTCCCCATTCTCAGACAGA +
Preference number: 2 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPRNPTQS*SPFSDR
Trigger: TCTGTCTGAGAATGGGGACCAGCTCTGAGTGGGGTT...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR TCA 90 bp GTGCTTAACACAGCACCACTACCTAAGGAAACCTGGAGAAAGTCGAAGATATGGTTGCAGTGTGTAGGATaGACGGTCAAAGATGCCAGT +
Preference number: 2 (lower is better)
Translates to: VLNTAPLPKETWRKSKIWLQCVG*TVKDAS
Trigger: ACTGGCATCTTTGACCGTTCATCCTACACACTGCAA...CCATATCTTCGACTTTCTCCAGGTTTCCTTAGGTAGTGGTGCTGTGTTAAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553736.1
3UTR-3UTR CCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCTTCCACAATCCATTTaGAATATCATGATCTTTGGG +
Preference number: 2 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASLPQSI*NIMIFG
Trigger: CCCAAAGATCATGATATTCCAAATGGATTGTGGAAG...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CCA 90 bp TTCTGTTGGGGAGAAAAGACTACACAGGCAAGGTATGATCTCTGTTGCAGTGTGCCCAGAAATCGTCTCTaGGACTTCAGTTTCCCATCA +
Preference number: 2 (lower is better)
Translates to: FCWGEKTTQARYDLCCSVPRNRL*DFSFPS
Trigger: TGATGGGAAACTGAAGTCCCAGAGACGATTTCTGGG...CACACTGCAACAGAGATCATACCTTGCCTGTGTAGTCTTTTCTCCCCAACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
3UTR-3UTR TCA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTGACCAGAACATTGCGTaGCTCATGCATAATCATACA +
Preference number: 2 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCDQNIA*LMHNHT
Trigger: TGTATGATTATGCATGAGTCACGCAATGTTCTGGTC...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR CAA 90 bp ACATTTCTCACTCCAACAAGGTGCATTTTCCCCTCTGGCGCTCAGTaGTATAAATCTGACCTCTTTCCCTCTCACTCAGAGATCTCTTTT +
Preference number: 2 (lower is better)
Translates to: TFLTPTRCIFPSGAQ*YKSDLFPSHSEISF
Trigger: AAAAGAGATCTCTGAGTGAGAGGGAAAGAGGTCAGATTTATACAACTGAGCGCCAGAGGGGAAAATGCACCTTGTTGGAGTGAGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
3UTR-3UTR TCA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTAACCAAGTGTACAAGTaGCCTGAGAAGAGAGTAAGA +
Preference number: 2 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLNQVYK*PEKRVR
Trigger: TCTTACTCTCTTCTCAGGTCACTTGTACACTTGGTT...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
3UTR GCA 72 bp TCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTaGCAGGCCTGCAGAGTGCATTCTTTGCCTTGGCTG +
Preference number: 3 (lower is better)
Translates to: SPALGVLPRGLF*QACRVHSLPWL
Trigger: CAGCCAAGGCAAAGAATGCACTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CAA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGAGTGCATTCTTTGCCTaGGCTGGCCTCAGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQSAFFA*AGLRGA
Trigger: GGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCACT...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR-3UTR CAA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCAGTGCATTCTTTGCCTaGGCTGGCCTCAGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVSAFFA*AGLRGA
Trigger: GGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCACT...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CAA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTAGTGCATTCTTTGCCTaGGCTGGCCTCAGAGGGGCC +
Preference number: 3 (lower is better)
Translates to: KASRPHPGKYKVSLPQSISAFFA*AGLRGA
Trigger: GGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCACT...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CAA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGTGCAGAGTGCATTCTTaGCCTTGGCTGGCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: TYLASPDPCKFLRNREYRCRVHS*PWLASE
Trigger: CTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGCA...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR CCA 72 bp TTCTCTTCCACAATCCATTTGGAATATCATGATCTTTaGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACT +
Preference number: 3 (lower is better)
Translates to: FSSTIHLEYHDL*VSGPWGPPQRT
Trigger: AGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR TCA 72 bp TTTTGGGATTGTGATGGATGCAATCCGGGACCCCTCTaGGAGGTGGCAAGTGAGCTTCTACTAGGAAACCAA +
Preference number: 3 (lower is better)
Translates to: FWDCDGCNPGPL*EVASELLLGNQ
Trigger: TTGGTTTCCTAGTAGAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR TCA 72 bp ATAAGGTTTCTCTTCCACAATCCATTTGGAATATCATaGTCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCA +
Preference number: 3 (lower is better)
Translates to: IRFLFHNPFGIS*SLGLRPLGSSP
Trigger: TGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAGAGAAACCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
3UTR-3UTR CAA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTTCCAGGACCAGAACATaGCGTGACTCATGCATAATC +
Preference number: 3 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCSRTRT*RDSCII
Trigger: GATTATGCATGAGTCACGCAATGTTCTGGTCCTGGA...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR GCA 72 bp CCATGTGTCACAAAAAGTGAGGAGCTTAAATTTGGTTaGCTAGCAGGAACTCACCACCCTAGACTTGCTACC +
Preference number: 3 (lower is better)
Translates to: PCVTKSEELKFG*LAGTHHPRLAT
Trigger: GGTAGCAAGTCTAGGGTGGTGAGTTCCTGCTAGGCAACCAAATTTAAGCTCCTCACTTTTTGTGACACATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR GCA 72 bp AGGTCCAGAGTTTCTACCTCTTCATCCAGATATAGGTaGGGGACCCCATATCTGACACCATGTGTCACAAAA +
Preference number: 3 (lower is better)
Translates to: RSRVSTSSSRYR*GTPYLTPCVTK
Trigger: TTTTGTGACACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAACTCTGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR TCA 72 bp CCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTaGCACCATGTGTCACAAAAAGTGAGGAGCTTAAAT +
Preference number: 3 (lower is better)
Translates to: PLHPDIGAGPHI*HHVSQKVRSLN
Trigger: ATTTAAGCTCCTCACTTTTTGTGACACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR GCA 72 bp TGGAGAAAGTCGAAGATATGGTCCCTGGCATTCAGATaGTTAGTTTCTGTTGGGGAGAAAAGACTACACAGG +
Preference number: 3 (lower is better)
Translates to: WRKSKIWSLAFR*LVSVGEKRLHR
Trigger: CCTGTGTAGTCTTTTCTCCCCAACAGAAACTAAGCATCTGAATGCCAGGGACCATATCTTCGACTTTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
3UTR CCA 72 bp TTTGTGCTTAACACAGCACCACTACCTAAGGAAACCTaGAGAAAGTCGAAGATATGGTCCCTGGCATTCAGA +
Preference number: 3 (lower is better)
Translates to: FVLNTAPLPKET*RKSKIWSLAFR
Trigger: TCTGAATGCCAGGGACCATATCTTCGACTTTCTCCAGGTTTCCTTAGGTAGTGGTGCTGTGTTAAGCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553736.1
3UTR TCA 72 bp GCAAGTGAGCTTCTACTAGGAAACCAAGTGTACAAGTaGCCTGAGAAGAGAGTAAGAAAGAGTGAGAGAGAG +
Preference number: 3 (lower is better)
Translates to: ASELLLGNQVYK*PEKRVRKSERE
Trigger: CTCTCTCTCACTCTTTCTTACTCTCTTCTCAGGTCACTTGTACACTTGGTTTCCTAGTAGAAGCTCACTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
3UTR CCA 72 bp ACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTaGCATAGTCACCTTAGAATAGCCCCCAAATGTGGA +
Preference number: 3 (lower is better)
Translates to: TQRSLLCISQVG*HSHLRIAPKCG
Trigger: TCCACATTTGGGGGCTATTCTAAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGAACCCCGCGGGCCGCTaGGCGTACAATCGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAENPAGR*AYNRSR
Trigger: CCTGGACCGATTGTACGCTCAGCGGCCCGCGGGGTT...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGCGGGCGGCCTGGATaGCCTGCGCCAGGAATCCCA +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACSGRPG*PAPGIP
Trigger: TGGGATTCCTGGCGCAGGGCATCCAGGCCGCCCGCT...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCGCGTCCAGGGAACCTTaGTCCCGGGCCGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACASREP*SRAGSN
Trigger: GTTGGAGCCGGCCCGGGAGCAAGGTTCCCTGGACGC...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAGGGGGCTGGACGGCTTaGTCGCGTCGCTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTGGWTA*SRRWPS
Trigger: GCTCGGCCAGCGACGCGAGCAAGCCGTCCAGCCCCC...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCTAGAGCTCCAGGGCTaGCCAGGGCCGGGGGATACG +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACLELQG*PGPGDT
Trigger: CGTATCCCCCGGCCCTGGGCAGCCCTGGAGCTCTAG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGGGGGGCTGGACGGCTTaGTCGCGTCGCTGGCCGAGC +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWGGWTA*SRRWPS
Trigger: GCTCGGCCAGCGACGCGAGCAAGCCGTCCAGCCCCC...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGCGTCCAGCAGCAGGCTaGCCCGGGGGCTGGACGGCT +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWRPAAG*PGGWTA
Trigger: AGCCGTCCAGCCCCCGGGGCAGCCTGCTGCTGGACG...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCTGCCGCTGGTGCGATTaGTGCAGGGCCGGCTACCTC +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACCRWCD*CRAGYL
Trigger: GAGGTAGCCGGCCCTGCAGCAATCGCACCAGCGGCA...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTGCTCCGGCCAGGGGTaGGCCAAACAGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLCSGQG*AKQARP
Trigger: GGGCCGTGCCTGTTTGGCCCACCCCTGGCCGGAGCA...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGGAGTGGCGGCTTTCCTaGCAGCCGAACCCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWEWRLS*QPNPAG
Trigger: GCCCGCGGGGTTCGGCTGCCAGGAAAGCCGCCACTC...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCGAAGTAGTCCTCCCTaGCCTCTGGCTCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACRSSPP*PLAPAS
Trigger: GGATGCGGGAGCCAGAGGCCAGGGAGGACTACTTCG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCCGGTTCTCTTTCCCTaGAGCCGGACTCTGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACPVLFP*SRTLVP
Trigger: GGGAACCAGAGTCCGGCTGCAGGGAAAGAGAACCGG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGAGAATAGCCTGCCGGTaGTCCGGCCAGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWRIACR*SGQGWA
Trigger: GGCCCACCCCTGGCCGGAGCACCGGCAGGCTATTCT...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGCCCAGAGGACTCTTCTaGCAGGCCTGCAGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAEPRGLF*QACRVH
Trigger: ATGCACTCTGCAGGCCTGGCAGAAGAGTCCTCTGGG...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAGCTTGCTCGCGTCGCTaGCCGAGCTACTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTACSRR*PSYWRS
Trigger: GCTTCGCCAGTAGCTCGGCCAGCGACGCGAGCAAGC...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGCCGGGGGATACGAGTaGCGGCTTTCCTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLAGGYE*RLSWQP
Trigger: CGGCTGCCAGGAAAGCCGCCACTCGTATCCCCCGGC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGATTCTTTGCCTTGGCTaGCCTCAGAGGGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAEILCLG*PQRGPL
Trigger: CAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAAT...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCGTGCATTCTTTGCCTTaGCTGGCCTCAGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACVHSLP*LASEGP
Trigger: GGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCTGGAGAAGTCCACTGTaGAGGGGATGCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACWRSPL*RGCHPG
Trigger: GCCTGGATGGCATCCCCTTCACAGTGGACTTCTCCA...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGTCCTCATCACTCAGCTaGATCCGGCAGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAESSSLS*IRQSSQ
Trigger: CTGTGAGGACTGCCGGATGCAGCTGAGTGATGAGGA...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGCCACAGCAGTTTGTCTaGAGGGTGACAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAEPQQFV*RVTAAA
Trigger: TGCTGCTGCTGTCACCCTGCAGACAAACTGCTGTGG...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCCCAGAGGACTCTTCTaGCAGGCCTGCAGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACPRGLF*QACRVH
Trigger: ATGCACTCTGCAGGCCTGGCAGAAGAGTCCTCTGGG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTGCTCCGGCCAGGGGTaGGCCAAACAGGCACGGCCC +
Preference number: 4 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLCSGQG*AKQARP
Trigger: GGGCCGTGCCTGTTTGGCCCACCCCTGGCCGGAGCA...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACCGGAACGAAAGGACCTaGTGGCTCCTCCAGACCCGA +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDRNERT*WLLQTR
Trigger: TCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTTCCG...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTGGGTCTCCGGCCCTTaGGGTCCTCCCCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLWVSGP*GPPQRT
Trigger: AGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCA...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGGTCGTAGCCCATGCTaGTGCCGCTGGTGCGATTGC +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLGRSPC*CRWCDC
Trigger: GCAATCGCACCAGCGGCATCAGCATGGGCTACGACC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR TCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACTGGAGAAGTCCACTGTaGAGGGGATGCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDWRSPL*RGCHPG
Trigger: GCCTGGATGGCATCCCCTTCACAGTGGACTTCTCCA...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGGGAATGTGGCTAAGCTaGAGCTTCCTAGACATCCCC +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAEGMWLS*SFLDIP
Trigger: GGGGATGTCTAGGAAGCTTCAGCTTAGCCACATTCC...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp AGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGACACTTAGGCGCCCCTTaGCCGGCCCGGGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: RNREYRQQPHSELVPILRHLGAP*PARGSR
Trigger: ACGGGACCCCCGGGCCGGGCAAGGGGCGCCTAAGTG...TCTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCACTTAGGCGCCCCTTaGCCGGCCCGGGGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASHLGAP*PARGSR
Trigger: ACGGGACCCCCGGGCCGGGCAAGGGGCGCCTAAGTG...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGTCCAGCAGCAGGCTaGCCCGGGGGCTGGACGGCT +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASRPAAG*PGGWTA
Trigger: AGCCGTCCAGCCCCCGGGGCAGCCTGCTGCTGGACG...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCGCAGAGTGCATTCTTTaGCTTGGCTGGCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACAECIL*LGWPQR
Trigger: CCTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGC...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCGCTGTTAGCTCGTCCTaGTACCGGGCGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLAVSSS*YRAPTA
Trigger: CGCCGTGGGCGCCCGGTACCAGGACGAGCTAACAGC...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGAGGCTGTCCAGGGCCTaGCAGGCATTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLRLSRA*QALLCP
Trigger: TGGGCAGAGCAATGCCTGCCAGGCCCTGGACAGCCT...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGCCTCAGAGGGGAGGATaGGTTGGCCACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLPQRGG*VGHRLH
Trigger: GTGCAGCCTGTGGCCAACCCATCCTCCCCTCTGAGG...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCTTGAGCCGCTGCATGTaGCAACCATGGCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACLSRCM*QPWQSK
Trigger: CTTGCTCTGCCATGGTTGCCACATGCAGCGGCTCAA...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACACTCAGAGGGGCCCACTaGCCACAGCAGTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTLRGAH*PQQFVC
Trigger: GCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAG...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACATTCTTTGCCTTGGCTaGCCTCAGAGGGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDILCLG*PQRGPL
Trigger: CAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAAT...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCTCAGACTGCACACATaGGAAAAAGGCCAGTCGCCC +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACLRLHT*EKGQSP
Trigger: GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGCCATTTGGAATATCATaGTCTTTGGGTCTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAEPFGIS*SLGLRP
Trigger: GGGCCGGAGACCCAAAGATCATGATATTCCAAATGG...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAAATCCGGGACCCCTCTaGGAGGTGGCAAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTNPGPL*EVASEL
Trigger: AAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATT...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCGCGGCCTGGATGCCCTaGGCCAGGAATCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPAAWMP*ARNPTA
Trigger: TGCTGTGGGATTCCTGGCGCAGGGCATCCAGGCCGC...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACTCCTCATCACTCAGCTaGATCCGGCAGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDSSSLS*IRQSSQ
Trigger: CTGTGAGGACTGCCGGATGCAGCTGAGTGATGAGGA...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACACCCAGAGGACTCTTCTaGCAGGCCTGCAGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTPRGLF*QACRVH
Trigger: ATGCACTCTGCAGGCCTGGCAGAAGAGTCCTCTGGG...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACTGCCTTCCTCTCCAGTaGATAGGAAGCCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDCLPLQ*IGSHLG
Trigger: TCCCAGGTGGCTTCCTATGCACTGGAGAGGAAGGCA...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCGCTTGCTCGCGTCGCTaGCCGAGCTACTGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPACSRR*PSYWRS
Trigger: GCTTCGCCAGTAGCTCGGCCAGCGACGCGAGCAAGC...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACTGCATGTGGCAACCATaGCAGAGCAAGTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDCMWQP*QSKCPS
Trigger: GGATGGGCACTTGCTCTGCCATGGTTGCCACATGCA...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCAGCTCAGATATAGTTaGCAGGGGGTTGTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACQLRYS*QGVVGH
Trigger: ATGCCCGACAACCCCCTGCCAACTATATCTGAGCTG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCTGGGTCTCCGGCCCTTaGGGTCCTCCCCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPWVSGP*GPPQRT
Trigger: AGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCA...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCGGGGTTGTCGGGCATTaGGCCGCTGCATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLGVVGH*AAACGN
Trigger: GTTGCCACATGCAGCGGCTCAATGCCCGACAACCCC...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCGGGGTTGTCGGGCATTaGGCCGCTGCATGTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPGVVGH*AAACGN
Trigger: GTTGCCACATGCAGCGGCTCAATGCCCGACAACCCC...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACGGAATGTGGCTAAGCTaGAGCTTCCTAGACATCCCC +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDGMWLS*SFLDIP
Trigger: GGGGATGTCTAGGAAGCTTCAGCTTAGCCACATTCC...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCTGAGAGGTGGCAAGTaGGCTTCTACTAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACLRGGK*ASTRKP
Trigger: TGGTTTCCTAGTAGAAGCTCACTTGCCACCTCTCAG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGAATCCGGGACCCCTCTaGGAGGTGGCAAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWNPGPL*EVASEL
Trigger: AAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATT...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTTCCGGGAGAATAGCCTaGCGGTGCTCCGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASSGRIA*RCSGQG
Trigger: CCCCTGGCCGGAGCACCGGCAGGCTATTCTCCCGGA...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGGGCCTGGCAGGCATTaGTCTGCCCATAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLGPGRH*SAHRCL
Trigger: AAGGCATCTATGGGCAGAGCAATGCCTGCCAGGCCC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGAGCAGCAGCAGTGATTaGAGCTCAGATATAGTTGGC +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAESSSSD*SSDIVG
Trigger: GCCAACTATATCTGAGCTGCAATCACTGCTGCTGCT...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACGAACCCTCCTGTGTGTaGCTAAGCTCAGACTGCACA +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDEPSCV*LSSDCT
Trigger: TGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTGCCGGGGGATACGAGTaGCGGCTTTCCTGGCAGCCG +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASAGGYE*RLSWQP
Trigger: CGGCTGCCAGGAAAGCCGCCACTCGTATCCCCCGGC...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCCGAAGTAGTCCTCCCTaGCCTCTGGCTCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFRSSPP*PLAPAS
Trigger: GGATGCGGGAGCCAGAGGCCAGGGAGGACTACTTCG...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCCCTCAGAGGGGAGGATaGGTTGGCCACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFPQRGG*VGHRLH
Trigger: GTGCAGCCTGTGGCCAACCCATCCTCCCCTCTGAGG...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCGAATATCATGATCTTTaGGTCTCCGGCCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACEYHDL*VSGPWG
Trigger: ACCCCAAGGGCCGGAGACCCAAAGATCATGATATTC...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAACCGCGCATCTGGGGCTaGGCGGGGCTAGCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQPRIWG*AGLAGS
Trigger: AGACCCTGCTAGCCCCGCTCAGCCCCAGATGCGCGG...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp AGAGAAAGCAGGCTAGGCCCAGAAATCGTCTCTGGGACTTCAGTTTCCCATCAGCTAGAGCTCCAGGGCTaGCCAGGGCCGGGGGATACG +
Preference number: 4 (lower is better)
Translates to: RESRLGPEIVSGTSVSHQLELQG*PGPGDT
Trigger: CGTATCCCCCGGCCCTGGGCAGCCCTGGAGCTCTAG...CTGATGGGAAACTGAAGTCCCAGAGACGATTTCTGGGCCTAGCCTGCTTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGCCATGGCAGAGCAAGTaGCCATCCAGAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWPWQSK*PSRGKQ
Trigger: CTGTTTCCCTCTGGATGGGCACTTGCTCTGCCATGG...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGCAGCAGCAGTGATTaGAGCTCAGATATAGTTGGC +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACSSSSD*SSDIVG
Trigger: GCCAACTATATCTGAGCTGCAATCACTGCTGCTGCT...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGCCACAGCAGTTTGTCTaGAGGGTGACAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWPQQFV*RVTAAA
Trigger: TGCTGCTGCTGTCACCCTGCAGACAAACTGCTGTGG...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGCAGAGTGCATTCTTTaGCTTGGCTGGCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLAECIL*LGWPQR
Trigger: CCTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGGCAGAGTGCATTCTTTaGCTTGGCTGGCCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWAECIL*LGWPQR
Trigger: CCTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGC...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAGGGACATCCCACACTaGATCAACCACAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDRDIPH*INHNPK
Trigger: TTTGGGGTTGTGGTTGATGCAGTGTGGGATGTCCCT...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGACACCCACAGAGATCTaGTCATTACCTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWTPTEI*SLPPPA
Trigger: GGCTGGGGGAGGTAATGAGCAGATCTCTGTGGGTGT...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTTGAGCCGCTGCATGTaGCAACCATGGCAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLLSRCM*QPWQSK
Trigger: CTTGCTCTGCCATGGTTGCCACATGCAGCGGCTCAA...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGCTCAGACTGCACACATaGGAAAAAGGCCAGTCGCCC +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWLRLHT*EKGQSP
Trigger: GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAG...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCCACACATGCATACACTaGGCTATATGGCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACHTCIH*AIWLSA
Trigger: TGCACTGAGCCATATAGCCCAGTGTATGCATGTGTG...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACACCATTTGGAATATCATaGTCTTTGGGTCTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTPFGIS*SLGLRP
Trigger: GGGCCGGAGACCCAAAGATCATGATATTCCAAATGG...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAGCGGGACCCCATATCTaGCACCATGTGTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTAGPHI*HHVSQK
Trigger: TTTTTGTGACACATGGTGTCAGATATGGGGTCCCGC...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGAACCAAGTGTACAAGTaGCCTGAGAAGAGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAENQVYK*PEKRVR
Trigger: TCTTACTCTCTTCTCAGGTCACTTGTACACTTGGTT...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAACTCCTAACCGCTCCATaGCCTCGGGCCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQLLTAP*PRAWGL
Trigger: GAGGCCCCAGGCCCGAGGGCATGGAGCGGTTAGGAG...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCGCGTCCAGGGAACCTTaGTCCCGGGCCGGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVASREP*SRAGSN
Trigger: GTTGGAGCCGGCCCGGGAGCAAGGTTCCCTGGACGC...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAACTAGAGCTCCAGGGCTaGCCAGGGCCGGGGGATACG +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQLELQG*PGPGDT
Trigger: CGTATCCCCCGGCCCTGGGCAGCCCTGGAGCTCTAG...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGACTTGTTGCAAACAATaGATCGGAAACAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAETCCKQ*IGNSLD
Trigger: ATCCAGGCTGTTTCCGATGCATTGTTTGCAACAAGT...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACATGCCTAAGCTCAGACTaGACACATGGGAAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTCLSSD*THGKKA
Trigger: GGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCA...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAGCTGTTAGCTCGTCCTaGTACCGGGCGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQAVSSS*YRAPTA
Trigger: CGCCGTGGGCGCCCGGTACCAGGACGAGCTAACAGC...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGCTCAGAGGGGCCCACTaGCCACAGCAGTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQLRGAH*PQQFVC
Trigger: GCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAG...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGGGGTTTGGGGGAGCTaGAGGGAGAATTACACTTTG +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLGVWGS*RENYTL
Trigger: CAAAGTGTAATTCTCCCTCCAGCTCCCCCAAACCCC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp AGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGATCAAAGGAGCCGCGCTaGTTTCGCTCAGCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RNREYRQQPHSELVPILRSKEPR*FRSASR
Trigger: CCTGGACGCTGAGCGAAATCAGCGCGGCTCCTTTGA...TCTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACATGCCTTTGTTGCACTTaGTACAGGTGCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTCLCCT*YRCRSS
Trigger: ACTACTTCGGCACCTGTATCAAGTGCAACAAAGGCA...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR TCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAAGTACACAGAGCCATTaGCACTGTAGAAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTSTQSH*HCRKPC
Trigger: GCAAGGCTTTCTACAGTGTCAATGGCTCTGTGTACT...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGCGGGACCCCATATCTaGCACCATGTGTCACAAAAA +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLAGPHI*HHVSQK
Trigger: TTTTTGTGACACATGGTGTCAGATATGGGGTCCCGC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGTGTACAAGTGACCTaGGAAGAGAGTAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACSVQVT*EESKKE
Trigger: CTCTTTCTTACTCTCTTCTCAGGTCACTTGTACACT...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGCTGAGAGGTGGCAAGTaGGCTTCTACTAGGAAACCA +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWLRGGK*ASTRKP
Trigger: TGGTTTCCTAGTAGAAGCTCACTTGCCACCTCTCAG...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGCTAGTTTTGGGATTGTaGTGGATGCAATCCGGGACC +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLLVLGL*WMQSGT
Trigger: GGTCCCGGATTGCATCCATCACAATCCCAAAACTAG...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTCTCCTAACCGCTCCATaGCCTCGGGCCTGGGGCCTC +
Preference number: 4 (lower is better)
Translates to: KASRPHPGKYKVSLPQSILLTAP*PRAWGL
Trigger: GAGGCCCCAGGCCCGAGGGCATGGAGCGGTTAGGAG...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAACGCTGGTGCGATTGCTaGAGGGCCGGCTACCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQRWCDC*RAGYLQ
Trigger: CTGGAGGTAGCCGGCCCTGCAGCAATCGCACCAGCG...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTAGAATAGCCTGCCGGTaGTCCGGCCAGGGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCRIACR*SGQGWA
Trigger: GGCCCACCCCTGGCCGGAGCACCGGCAGGCTATTCT...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCACTTGTTGCAAACAATaGATCGGAAACAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: FGSPALGVLPRGLFCQACTCCKQ*IGNSLD
Trigger: ATCCAGGCTGTTTCCGATGCATTGTTTGCAACAAGT...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACCATCCAGGCACTTGTTaGAAACAATGCATCGGAAAC +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDHPGTC*KQCIGN
Trigger: GTTTCCGATGCATTGTTTGCAACAAGTGCCTGGATG...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGGGTTGGCCACAGGCTaGACACTTAGGAGCATAATT +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLGLATG*TLRSII
Trigger: AATTATGCTCCTAAGTGTGCAGCCTGTGGCCAACCC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAAGCAGCAGCAGTGATTaGAGCTCAGATATAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTSSSSD*SSDIVG
Trigger: GCCAACTATATCTGAGCTGCAATCACTGCTGCTGCT...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGTGCCTAAGCTCAGACTaGACACATGGGAAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWCLSSD*THGKKA
Trigger: GGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCA...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTGCCTAAGCTCAGACTaGACACATGGGAAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLCLSSD*THGKKA
Trigger: GGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCA...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCATCCCACAGCCCAGGTaGAAGACTTCTGGGGTCACT +
Preference number: 4 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFIPQPR*KTSGVT
Trigger: AGTGACCCCAGAAGTCTTGCACCTGGGCTGTGGGAT...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp AGAGAAAGCAGGCTAGGCCCAGAAATCGTCTCTGGGACTTCAGTTTCCCATCAGTGGCAGAGGGCTCCGTaGAGAGGGGACCATGTGAGC +
Preference number: 4 (lower is better)
Translates to: RESRLGPEIVSGTSVSHQWQRAP*RGDHVS
Trigger: GCTCACATGGTCCCCTCTGCACGGAGCCCTCTGCCA...CTGATGGGAAACTGAAGTCCCAGAGACGATTTCTGGGCCTAGCCTGCTTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTAACGAAAGGACCTGGTaGCTCCTCCAGACCCGACGG +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASNERTW*LLQTRR
Trigger: CCGTCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTT...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGGAACGAAAGGACCTaGTGGCTCCTCCAGACCCGA +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASRNERT*WLLQTR
Trigger: TCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTTCCG...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGAATATCATGATCTTTaGGTCTCCGGCCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLEYHDL*VSGPWG
Trigger: ACCCCAAGGGCCGGAGACCCAAAGATCATGATATTC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTTGCCGCTGGTGCGATTaGTGCAGGGCCGGCTACCTC +
Preference number: 4 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCCRWCD*CRAGYL
Trigger: GAGGTAGCCGGCCCTGCAGCAATCGCACCAGCGGCA...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCGAACCCTCCTGTGTGTaGCTAAGCTCAGACTGCACA +
Preference number: 4 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLEPSCV*LSSDCT
Trigger: TGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGTCATCCAGATATAGGTaGGGGACCCCATATCTGACA +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWSSRYR*GTPYLT
Trigger: TGTCAGATATGGGGTCCCGCACCTATATCTGGATGA...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGACACCCACAGAGATCTaGTCATTACCTCCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQTPTEI*SLPPPA
Trigger: GGCTGGGGGAGGTAATGAGCAGATCTCTGTGGGTGT...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGCACTGTAGAAAGCCTTaGAACGCAAAGTTCGCCCTA +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWHCRKP*NAKFAL
Trigger: TAGGGCGAACTTTGCGTTGCAAGGCTTTCTACAGTG...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CCA 90 bp TTCTGTTGGGGAGAAAAGACTACACAGGCAAGGTATGATCTCTGTTGCAGTGTGGCTGTTAGCTCGTCCTaGTACCGGGCGCCCACGGCG +
Preference number: 4 (lower is better)
Translates to: FCWGEKTTQARYDLCCSVAVSSS*YRAPTA
Trigger: CGCCGTGGGCGCCCGGTACCAGGACGAGCTAACAGC...CACACTGCAACAGAGATCATACCTTGCCTGTGTAGTCTTTTCTCCCCAACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCCTCAGAGGGGAGGATaGGTTGGCCACAGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVPQRGG*VGHRLH
Trigger: GTGCAGCCTGTGGCCAACCCATCCTCCCCTCTGAGG...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGCTTCCACAATCCATTTaGAATATCATGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: GLRPLGSSPEDSSARPAELPQSI*NIMIFG
Trigger: CCCAAAGATCATGATATTCCAAATGGATTGTGGAAG...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACATTTCCCAGGTTGGCTaGCATAGTCACCTTAGAATA +
Preference number: 4 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDISQVG*HSHLRI
Trigger: TATTCTAAGGTGACTATGCCAGCCAACCTGGGAAAT...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCTCAAAGGAGCCGCGCTaGTTTCGCTCAGCGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVSKEPR*FRSASR
Trigger: CCTGGACGCTGAGCGAAATCAGCGCGGCTCCTTTGA...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR TCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCTAGTTTTGGGATTGTaGTGGATGCAATCCGGGACC +
Preference number: 4 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPLVLGL*WMQSGT
Trigger: GGTCCCGGATTGCATCCATCACAATCCCAAAACTAG...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCGGGTTGGCCACAGGCTaGACACTTAGGAGCATAATT +
Preference number: 4 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLGLATG*TLRSII
Trigger: AATTATGCTCCTAAGTGTGCAGCCTGTGGCCAACCC...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGCTCACTCCAACAAGGTaGATTTTCCCCTCTGGCGCT +
Preference number: 4 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQLTPTR*IFPSGA
Trigger: AGCGCCAGAGGGGAAAATGCACCTTGTTGGAGTGAG...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAAACGAAAGGACCTGGTaGCTCCTCCAGACCCGACGG +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQNERTW*LLQTRR
Trigger: CCGTCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTT...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CCA 90 bp AAGCAGGCTAGGCCCAGAAATCGTCTCTGGGACTTCAGTTTCCCATCAGTCAAACGGAACGAAAGGACCTaGTGGCTCCTCCAGACCCGA +
Preference number: 4 (lower is better)
Translates to: KQARPRNRLWDFSFPSVKRNERT*WLLQTR
Trigger: TCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTTCCG...TTTGACTGATGGGAAACTGAAGTCCCAGAGACGATTTCTGGGCCTAGCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGTGACACAGTATACTTaGTTGGAGAAGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLVTQYT*LEKSTV
Trigger: CACAGTGGACTTCTCCAACCAAGTATACTGTGTCAC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGGTGACACAGTATACTTaGTTGGAGAAGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWVTQYT*LEKSTV
Trigger: CACAGTGGACTTCTCCAACCAAGTATACTGTGTCAC...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCAGAGGGGCCCACTaGCCACAGCAGTTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVLRGAH*PQQFVC
Trigger: GCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAG...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAGTGCATTCTTTGCCTTaGCTGGCCTCAGAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQVHSLP*LASEGP
Trigger: GGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTTTTGGGAGGCCAAGGTaGGAGGATCATTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASFGRPR*EDHSSP
Trigger: TGGGCTCGAATGATCCTCCCACCTTGGCCTCCCAAA...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGAACCCCACTCAGAGCTaGTCCCCATTCTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQNPTQS*SPFSDR
Trigger: TCTGTCTGAGAATGGGGACCAGCTCTGAGTGGGGTT...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAATACACTGGGCTATATaGCTCAGTGCACCTAAACTT +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTIHWAI*LSAPKL
Trigger: AAGTTTAGGTGCACTGAGCCATATAGCCCAGTGTAT...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCAGGTGCAAGACTTCTaGGGTCACTGCTCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVQVQDF*GHCSPL
Trigger: CAGCGGGGAGCAGTGACCCCAGAAGTCTTGCACCTG...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR TCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGTTCTCCAAAATCAAGTaGCCACAGACACAGCATTTC +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWFSKIK*PQTQHF
Trigger: GAAATGCTGTGTCTGTGGTCACTTGATTTTGGAGAA...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAGGGCCTGGCAGGCATTaGTCTGCCCATAGATGCCTT +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQGPGRH*SAHRCL
Trigger: AAGGCATCTATGGGCAGAGCAATGCCTGCCAGGCCC...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGTCCTCATCACTCAGCTaGATCCGGCAGTCCTCACAG +
Preference number: 4 (lower is better)
Translates to: TYLASPDPCKFLRNREYRSSSLS*IRQSSQ
Trigger: CTGTGAGGACTGCCGGATGCAGCTGAGTGATGAGGA...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGAGGGACATCCCACACTaGATCAACCACAACCCCAAA +
Preference number: 4 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQRDIPH*INHNPK
Trigger: TTTGGGGTTGTGGTTGATGCAGTGTGGGATGTCCCT...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGGATGCAATTCCAATTTaGTTTGGCTTCATTCCAGCC +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLDAIPI*FGFIPA
Trigger: GGCTGGAATGAAGCCAAAGCAAATTGGAATTGCATC...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CCA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGAAGGCTGTCCAGGGCCTaGCAGGCATTGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPRRLSRA*QALLCP
Trigger: TGGGCAGAGCAATGCCTGCCAGGCCCTGGACAGCCT...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CCA 90 bp AGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGACAGCTCAGATATAGTTaGCAGGGGGTTGTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: RNREYRQQPHSELVPILRQLRYS*QGVVGH
Trigger: ATGCCCGACAACCCCCTGCCAACTATATCTGAGCTG...TCTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCTGCCTCCTGAAACCCTaGAAACAGATAATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPCLLKP*KQIIFL
Trigger: GAGGAAGATTATCTGTTTTCAGGGTTTCAGGAGGCA...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTTGGAGAAGTCCACTGTaGAGGGGATGCCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: KASRPHPGKYKVSLPQSIWRSPL*RGCHPG
Trigger: GCCTGGATGGCATCCCCTTCACAGTGGACTTCTCCA...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCTTTTGTGGTAGTCGGTaGCACAGTATACTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPFCGSR*HSILGW
Trigger: CCAACCAAGTATACTGTGTCACCGACTACCACAAAA...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAAGATCTAGCTTTAGGTaGACTAGTTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTRSSFR*TSFKQT
Trigger: AGTTTGCTTGAAACTAGTTCACCTAAAGCTAGATCT...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp CAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTAGAATATCCGGGAGAATAGCCTaGCGGTGCTCCGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: QRSLLCISQVGWHSHLRISGRIA*RCSGQG
Trigger: CCCCTGGCCGGAGCACCGGCAGGCTATTCTCCCGGA...TATTCTAAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCCATCCAGGCACTTGTTaGAAACAATGCATCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFHPGTC*KQCIGN
Trigger: GTTTCCGATGCATTGTTTGCAACAAGTGCCTGGATG...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAACCATGGCAGAGCAAGTaGCCATCCAGAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQPWQSK*PSRGKQ
Trigger: CTGTTTCCCTCTGGATGGGCACTTGCTCTGCCATGG...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGTCATCCAGATATAGGTaGGGGACCCCATATCTGACA +
Preference number: 4 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQSSRYR*GTPYLT
Trigger: TGTCAGATATGGGGTCCCGCACCTATATCTGGATGA...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CCA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCGTGACACAGTATACTTaGTTGGAGAAGTCCACTGTG +
Preference number: 4 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPVTQYT*LEKSTV
Trigger: CACAGTGGACTTCTCCAACCAAGTATACTGTGTCAC...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCTGCATGTGGCAACCATaGCAGAGCAAGTGCCCATCC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVCMWQP*QSKCPS
Trigger: GGATGGGCACTTGCTCTGCCATGGTTGCCACATGCA...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTATTCTTTGCCTTGGCTaGCCTCAGAGGGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: KASRPHPGKYKVSLPQSIILCLG*PQRGPL
Trigger: CAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAAT...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp TTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACACTTCCACAATCCATTTaGAATATCATGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: LAGLRGAHWPQQFVCRVTLPQSI*NIMIFG
Trigger: CCCAAAGATCATGATATTCCAAATGGATTGTGGAAG...TGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAACTCAGACTGCACACATaGGAAAAAGGCCAGTCGCCC +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQLRLHT*EKGQSP
Trigger: GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAG...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGCAGGGACAGACTCCATaGAGGTCAGGACTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: TYLASPDPCKFLRNREYRQGQTP*RSGLEL
Trigger: TAACTCCAGTCCTGACCTCCATGGAGTCTGTCCCTG...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR TCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCGACCAGAACATTGCGTaGCTCATGCATAATCATACA +
Preference number: 4 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFDQNIA*LMHNHT
Trigger: TGTATGATTATGCATGAGTCACGCAATGTTCTGGTC...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGGGGAGAATTACACTTTaGTTTGGTTCTAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWGRITL*FGSSQF
Trigger: AAACTGACTAGAACCAAATCAAAGTGTAATTCTCCC...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTAGAAGCCTCTTTGCCTaGGCATATCTATCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASRSLFA*AYLSCS
Trigger: AGAGCAGGATAGATATGCTCAGGCAAAGAGGCTTCT...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGGGGTTGGCCACAGGCTaGACACTTAGGAGCATAATT +
Preference number: 4 (lower is better)
Translates to: TYLASPDPCKFLRNREYRGLATG*TLRSII
Trigger: AATTATGCTCCTAAGTGTGCAGCCTGTGGCCAACCC...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTCCATGGCAGAGCAAGTaGCCATCCAGAGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: KASRPHPGKYKVSLPQSIPWQSK*PSRGKQ
Trigger: CTGTTTCCCTCTGGATGGGCACTTGCTCTGCCATGG...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCGAACCCTCCTGTGTGTaGCTAAGCTCAGACTGCACA +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVEPSCV*LSSDCT
Trigger: TGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp ATCTGTTTTGTGCTTAACACAGCACCACTACCTAAGGAAACCTGGAGAAAGTCGAACGAAAGGACCTGGTaGCTCCTCCAGACCCGACGG +
Preference number: 4 (lower is better)
Translates to: ICFVLNTAPLPKETWRKSNERTW*LLQTRR
Trigger: CCGTCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTT...CGACTTTCTCCAGGTTTCCTTAGGTAGTGGTGCTGTGTTAAGCACAAAACAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp TTAGTTTCTGTTGGGGAGAAAAGACTACACAGGCAAGGTATGATCTCTGTTGCACGAAGTAGTCCTCCCTaGCCTCTGGCTCCCGCATCC +
Preference number: 4 (lower is better)
Translates to: LVSVGEKRLHRQGMISVARSSPP*PLAPAS
Trigger: GGATGCGGGAGCCAGAGGCCAGGGAGGACTACTTCG...TGCAACAGAGATCATACCTTGCCTGTGTAGTCTTTTCTCCCCAACAGAAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGCTTCCACAATCCATTTaGAATATCATGATCTTTGGG +
Preference number: 4 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLLPQSI*NIMIFG
Trigger: CCCAAAGATCATGATATTCCAAATGGATTGTGGAAG...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAGGGGTTTGGGGGAGCTaGAGGGAGAATTACACTTTG +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQGVWGS*RENYTL
Trigger: CAAAGTGTAATTCTCCCTCCAGCTCCCCCAAACCCC...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGAGTACACAGAGCCATTaGCACTGTAGAAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: TYLASPDPCKFLRNREYRSTQSH*HCRKPC
Trigger: GCAAGGCTTTCTACAGTGTCAATGGCTCTGTGTACT...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGTTCTCCAAAATCAAGTaGCCACAGACACAGCATTTC +
Preference number: 4 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQFSKIK*PQTQHF
Trigger: GAAATGCTGTGTCTGTGGTCACTTGATTTTGGAGAA...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTTTTTGTGGTAGTCGGTaGCACAGTATACTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASFCGSR*HSILGW
Trigger: CCAACCAAGTATACTGTGTCACCGACTACCACAAAA...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTGAGCTTAAATTTGGTTaGCTAGCAGGAACTCACCAC +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASELKFG*LAGTHH
Trigger: GTGGTGAGTTCCTGCTAGGCAACCAAATTTAAGCTC...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTGCTTTTCCTCCTAACTaGTGTCTGTCCTTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCAFPPN*CLSFPA
Trigger: TGCGGGGAAGGACAGACAGCAGTTAGGAGGAAAAGC...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGAGACTTCTGGGGTCACTaGTCCCCGCTGCTGCATAAT +
Preference number: 4 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPRDFWGH*SPLLHN
Trigger: ATTATGCAGCAGCGGGGAGCAGTGACCCCAGAAGTC...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp GTTGCAGTGTGTAGGATGAACGGTCAAAGATGCCAGTCCACAGGTGCTCAGCAGATGATTTCTCTCCACTaGAGACTTCCAAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VAVCRMNGQRCQSTGAQQMISLH*RLPRME
Trigger: CTCCATCCTTGGAAGTCTGCAGTGGAGAGAAATCAT...CTGCTGAGCACCTGTGGACTGGCATCTTTGACCGTTCATCCTACACACTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGATTTGGGAGGCCAAGGTaGGAGGATCATTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPRFGRPR*EDHSSP
Trigger: TGGGCTCGAATGATCCTCCCACCTTGGCCTCCCAAA...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CCA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTAACCCCACTCAGAGCTaGTCCCCATTCTCAGACAGA +
Preference number: 4 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCNPTQS*SPFSDR
Trigger: TCTGTCTGAGAATGGGGACCAGCTCTGAGTGGGGTT...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATGCCTTTGTTGCACTTaGTACAGGTGCCGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQCLCCT*YRCRSS
Trigger: ACTACTTCGGCACCTGTATCAAGTGCAACAAAGGCA...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR TCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCAGTACACAGAGCCATTaGCACTGTAGAAAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVSTQSH*HCRKPC
Trigger: GCAAGGCTTTCTACAGTGTCAATGGCTCTGTGTACT...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGTTTTGTGGTAGTCGGTaGCACAGTATACTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: TYLASPDPCKFLRNREYRFCGSR*HSILGW
Trigger: CCAACCAAGTATACTGTGTCACCGACTACCACAAAA...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTGACCAGAACATTGCGTaGCTCATGCATAATCATACA +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASDQNIA*LMHNHT
Trigger: TGTATGATTATGCATGAGTCACGCAATGTTCTGGTC...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTAGTGTACAAGTGACCTaGGAAGAGAGTAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASSVQVT*EESKKE
Trigger: CTCTTTCTTACTCTCTTCTCAGGTCACTTGTACACT...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCAGATCTAGCTTTAGGTaGACTAGTTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLRSSFR*TSFKQT
Trigger: AGTTTGCTTGAAACTAGTTCACCTAAAGCTAGATCT...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCCACCAAAATAGGAATTaGGCTTTTGGCAAATTAGTC +
Preference number: 4 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLHQNRN*AFGKLV
Trigger: GACTAATTTGCCAAAAGCTCAATTCCTATTTTGGTG...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTCACTGTAGAAAGCCTTaGAACGCAAAGTTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: KASRPHPGKYKVSLPQSIHCRKP*NAKFAH
Trigger: GTGGGCGAACTTTGCGTTGCAAGGCTTTCTACAGTG...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR GCA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTCCACAGCAGTTTGTCTaGAGGGTGACAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLPQQFV*RVTAAA
Trigger: TGCTGCTGCTGTCACCCTGCAGACAAACTGCTGTGG...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR GCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGGAGCTTAAATTTGGTTaGCTAGCAGGAACTCACCAC +
Preference number: 4 (lower is better)
Translates to: TYLASPDPCKFLRNREYRELKFG*LAGTHH
Trigger: GTGGTGAGTTCCTGCTAGGCAACCAAATTTAAGCTC...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAGAACACACCCACACATaGATACACTGGGCTATATGG +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQEHTHT*IHWAIW
Trigger: CCATATAGCCCAGTGTATGCATGTGTGGGTGTGTTC...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCAGGTGCTATATGATTTaGATAGAGAGAACCACATTG +
Preference number: 4 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFRCYMI*IERTTL
Trigger: CAATGTGGTTCTCTCTATGCAAATCATATAGCACCT...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCTGCTCCTCCAGCTCCTaGCTCCTTAACAGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVCSSSS*LLNSFL
Trigger: TAGAAAACTGTTAAGGAGGCAGGAGCTGGAGGAGCA...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp AGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGAACTGCTCCCCGCTGCTaGATAATATATTTAAACCTG +
Preference number: 4 (lower is better)
Translates to: RNREYRQQPHSELVPILRTAPRC*IIYLNL
Trigger: CAGGTTTAAATATATTATGCAGCAGCGGGGAGCAGT...TCTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp GGTATGATCTCTGTTGCAGTGTGTAGGATGAACGGTCAAAGATGCCAGTCCACAATGAACGGTCAAAGATaGCAGTCCACAGGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GMISVAVCRMNGQRCQSTMNGQR*QSTGAQ
Trigger: CTGAGCACCTGTGGACTGGCATCTTTGACCGTTCAT...TGTGGACTGGCATCTTTGACCGTTCATCCTACACACTGCAACAGAGATCATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCACACATGCATACACTaGGCTATATGGCTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVHTCIH*AIWLSA
Trigger: TGCACTGAGCCATATAGCCCAGTGTATGCATGTGTG...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CCA 90 bp TCAAAGATGCCAGTCCACAGGTGCTCAGCAGCAGACTTGAAAATACTTTCTAGAGAAAAGGATCTGGCTTaGCAGAGGGCTCCGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SKMPVHRCSAADLKILSREKDLA*QRAPCR
Trigger: TCTGCACGGAGCCCTCTGCCAAGCCAGATCCTTTTC...TCTAGAAAGTATTTTCAAGTCTGCTGCTGAGCACCTGTGGACTGGCATCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
3UTR CAA 72 bp ACTCCAACAAGGTGCATTTTCCCCTCTGGCGCTCAGTaGTATAAATCTGACCTCTTTCCCTCTCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: TPTRCIFPSGAQ*YKSDLFPSHSE
Trigger: CTCTGAGTGAGAGGGAAAGAGGTCAGATTTATACAACTGAGCGCCAGAGGGGAAAATGCACCTTGTTGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCTGCCTCCTGAAACCCTaGAAACAGATAATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVCLLKP*KQIIFL
Trigger: GAGGAAGATTATCTGTTTTCAGGGTTTCAGGAGGCA...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATGCCTCCTGAAACCCTaGAAACAGATAATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQCLLKP*KQIIFL
Trigger: GAGGAAGATTATCTGTTTTCAGGGTTTCAGGAGGCA...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGAACCAAGTGTACAAGTaGCCTGAGAAGAGAGTAAGA +
Preference number: 4 (lower is better)
Translates to: TYLASPDPCKFLRNREYRNQVYK*PEKRVR
Trigger: TCTTACTCTCTTCTCAGGTCACTTGTACACTTGGTT...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR TCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCACGTGCTGGAATACGTaGGCTCTTAATAAGGTGCTA +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVTCWNT*ALNKVL
Trigger: TAGCACCTTATTAAGAGCTCACGTATTCCAGCACGT...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCATCCAGGCACTTGTTaGAAACAATGCATCGGAAAC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVHPGTC*KQCIGN
Trigger: GTTTCCGATGCATTGTTTGCAACAAGTGCCTGGATG...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTGAACACACCCACACATaGATACACTGGGCTATATGG +
Preference number: 4 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCEHTHT*IHWAIW
Trigger: CCATATAGCCCAGTGTATGCATGTGTGGGTGTGTTC...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp AGGCAAGGTATGATCTCTGTTGCAGTGTGTAGGATGAACGGTCAAAGATGCCAGTCCCTGGCATTCAGATaGTTAGTTTCTGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RQGMISVAVCRMNGQRCQSLAFR*LVSVGE
Trigger: CTCCCCAACAGAAACTAAGCATCTGAATGCCAGGGA...CTGGCATCTTTGACCGTTCATCCTACACACTGCAACAGAGATCATACCTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp CCTGGCATTCAGATGCTTAGTTTCTGTTGGGGAGAAAAGACTACACAGGCAAGGGCAGACTTCCAAGGATaGAGAAAAGGATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGIQMLSFCWGEKTTQARADFQG*RKGSGL
Trigger: CAAGCCAGATCCTTTTCTCCATCCTTGGAAGTCTGC...CCTTGCCTGTGTAGTCTTTTCTCCCCAACAGAAACTAAGCATCTGAATGCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR TCA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTCCATTTGGAATATCATaGTCTTTGGGTCTCCGGCCC +
Preference number: 4 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLPFGIS*SLGLRP
Trigger: GGGCCGGAGACCCAAAGATCATGATATTCCAAATGG...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp AGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGAGGGAGAATTACACTTTaGTTTGGTTCTAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: RNREYRQQPHSELVPILRGRITL*FGSSQF
Trigger: AAACTGACTAGAACCAAATCAAAGTGTAATTCTCCC...TCTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR GCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCGTCACTGCTCCCCGCTaGTGCATAATATATTTAAAC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVVTAPR*CIIYLN
Trigger: GTTTAAATATATTATGCAGCAGCGGGGAGCAGTGAC...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CCA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTGAATATCATGATCTTTaGGTCTCCGGCCCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLEYHDL*VSGPWG
Trigger: ACCCCAAGGGCCGGAGACCCAAAGATCATGATATTC...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CCA 90 bp CAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTAGAATATTTGGGAGGCCAAGGTaGGAGGATCATTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QRSLLCISQVGWHSHLRIFGRPR*EDHSSP
Trigger: TGGGCTCGAATGATCCTCCCACCTTGGCCTCCCAAA...TATTCTAAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp TCAAAGATGCCAGTCCACAGGTGCTCAGCAGCAGACTTGAAAATACTTTCTAGATTGCAGTGTGTAGGATaGACGGTCAAAGATGCCAGT +
Preference number: 4 (lower is better)
Translates to: SKMPVHRCSAADLKILSRLQCVG*TVKDAS
Trigger: ACTGGCATCTTTGACCGTTCATCCTACACACTGCAA...TCTAGAAAGTATTTTCAAGTCTGCTGCTGAGCACCTGTGGACTGGCATCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR GCA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTACTTGTTGCAAACAATaGATCGGAAACAGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KASRPHPGKYKVSLPQSITCCKQ*IGNSLD
Trigger: ATCCAGGCTGTTTCCGATGCATTGTTTGCAACAAGT...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR GCA 90 bp AGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGAGAGCTCTTAATAAGGTaGTATATGATTTGCATAGAG +
Preference number: 4 (lower is better)
Translates to: RNREYRQQPHSELVPILRELLIR*YMICIE
Trigger: CTCTATGCAAATCATATAGCACCTTATTAAGAGCTC...TCTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR GCA 90 bp TTAGTTTCTGTTGGGGAGAAAAGACTACACAGGCAAGGTATGATCTCTGTTGCAATGCCAGTCCACAGGTaGTCAGCAGCAGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: LVSVGEKRLHRQGMISVAMPVHR*SAADLK
Trigger: TTTCAAGTCTGCTGCTGAGCACCTGTGGACTGGCAT...TGCAACAGAGATCATACCTTGCCTGTGTAGTCTTTTCTCCCCAACAGAAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CCA 90 bp CAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTAGAATACAGCTCAGATATAGTTaGCAGGGGGTTGTCGGGCAT +
Preference number: 4 (lower is better)
Translates to: QRSLLCISQVGWHSHLRIQLRYS*QGVVGH
Trigger: ATGCCCGACAACCCCCTGCCAACTATATCTGAGCTG...TATTCTAAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CCA 90 bp ATCTGTTTTGTGCTTAACACAGCACCACTACCTAAGGAAACCTGGAGAAAGTCGCCCAGAAATCGTCTCTaGGACTTCAGTTTCCCATCA +
Preference number: 4 (lower is better)
Translates to: ICFVLNTAPLPKETWRKSPRNRL*DFSFPS
Trigger: TGATGGGAAACTGAAGTCCCAGAGACGATTTCTGGG...CGACTTTCTCCAGGTTTCCTTAGGTAGTGGTGCTGTGTTAAGCACAAAACAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR TCA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAAGATCTAGCTTTAGGTaGACTAGTTTCAAGCAAACT +
Preference number: 4 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQRSSFR*TSFKQT
Trigger: AGTTTGCTTGAAACTAGTTCACCTAAAGCTAGATCT...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCACCAAAATAGGAATTaGGCTTTTGGCAAATTAGTC +
Preference number: 4 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVHQNRN*AFGKLV
Trigger: GACTAATTTGCCAAAAGCTCAATTCCTATTTTGGTG...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR TCA 90 bp CAAGGTATGATCTCTGTTGCAGTGTGTAGGATGAACGGTCAAAGATGCCAGTCCTGTTCAGTTATAGAATaGTTTCTCTCCACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: QGMISVAVCRMNGQRCQSCSVIE*FLSTAD
Trigger: GTCTGCAGTGGAGAGAAATCATTCTATAACTGAACA...GGACTGGCATCTTTGACCGTTCATCCTACACACTGCAACAGAGATCATACCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR TCA 90 bp GCAGACTTGAAAATACTTTCTAGAGAAAGCAGGCTAGGCCCAGAAATCGTCTCTTACACAGGCAAGGTATaGTCTCTGTTGCAGTGTGTA +
Preference number: 4 (lower is better)
Translates to: ADLKILSRESRLGPEIVSYTGKV*SLLQCV
Trigger: TACACACTGCAACAGAGATCATACCTTGCCTGTGTA...AGAGACGATTTCTGGGCCTAGCCTGCTTTCTCTAGAAAGTATTTTCAAGTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR GCA 90 bp CAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTAGAATACACTGTAGAAAGCCTTaGAACGCAAAGTTCGCCCAC +
Preference number: 4 (lower is better)
Translates to: QRSLLCISQVGWHSHLRIHCRKP*NAKFAH
Trigger: GTGGGCGAACTTTGCGTTGCAAGGCTTTCTACAGTG...TATTCTAAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTGACCAGAACATTGCGTaGCTCATGCATAATCATACA +
Preference number: 4 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLDQNIA*LMHNHT
Trigger: TGTATGATTATGCATGAGTCACGCAATGTTCTGGTC...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTCACCAAAATAGGAATTaGGCTTTTGGCAAATTAGTC +
Preference number: 4 (lower is better)
Translates to: KASRPHPGKYKVSLPQSIHQNRN*AFGKLV
Trigger: GACTAATTTGCCAAAAGCTCAATTCCTATTTTGGTG...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CCA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTATACACTGGGCTATATaGCTCAGTGCACCTAAACTT +
Preference number: 4 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLIHWAI*LSAPKL
Trigger: AAGTTTAGGTGCACTGAGCCATATAGCCCAGTGTAT...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR TCA 90 bp CAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTAGAATATTCTCCAAAATCAAGTaGCCACAGACACAGCATTTC +
Preference number: 4 (lower is better)
Translates to: QRSLLCISQVGWHSHLRIFSKIK*PQTQHF
Trigger: GAAATGCTGTGTCTGTGGTCACTTGATTTTGGAGAA...TATTCTAAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CCA 90 bp TGCTTAGTTTCTGTTGGGGAGAAAAGACTACACAGGCAAGGTATGATCTCTGTTATGCTTAGTTTCTGTTaGGGAGAAAAGACTACACAG +
Preference number: 4 (lower is better)
Translates to: CLVSVGEKRLHRQGMISVMLSFC*GEKTTQ
Trigger: CTGTGTAGTCTTTTCTCCCCAACAGAAACTAAGCAT...AACAGAGATCATACCTTGCCTGTGTAGTCTTTTCTCCCCAACAGAAACTAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS CCA 90 bp GCAGGCGACTGGCTTTCTCTCCTAACCGCTCCATGCCCTCGGGCCTaGGGCCTCTCGCCCCCTCCCCGCCTGGCACCCTGCGGCGTCTCG +
Preference number: 5 (lower is better)
Translates to: AGDWLSLLTAPCPRA*GLSPPPRLAPCGVS
Trigger: CGAGACGCCGCAGGGTGCCAGGCGGGGAGGGGGCGAGAGGCCCCAGGCCCGAGGGCATGGAGCGGTTAGGAGAGAAAGCCAGTCGCCTGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS CCA 90 bp CTCCCGCATCCGGGCCCGGGCGGCCTCCGGAACGAAAGGACCTGGTaGCTCCTCCAGACCCGACGGCTCAATCCCCGAGGGTTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: LPHPGPGGLRNERTW*LLQTRRLNPRGFSA
Trigger: CGCGGAGAACCCTCGGGGATTGAGCCGTCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTTCCGGAGGCCGCCCGGGCCCGGATGCGGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000553736.1
CDS CCA 90 bp TGGCTCCCGCATCCGGGCCCGGGCGGCCTCCGGAACGAAAGGACCTaGTGGCTCCTCCAGACCCGACGGCTCAATCCCCGAGGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: WLPHPGPGGLRNERT*WLLQTRRLNPRGFS
Trigger: GGAGAACCCTCGGGGATTGAGCCGTCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTTCCGGAGGCCGCCCGGGCCCGGATGCGGGAGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000553736.1
CDS CCA 90 bp AGGGGACCATGTGAGCATGATTCCGAAGTAGTCCTCCCTGGCCTCTaGCTCCCGCATCCGGGCCCGGGCGGCCTCCGGAACGAAAGGACC +
Preference number: 5 (lower is better)
Translates to: RGPCEHDSEVVLPGL*LPHPGPGGLRNERT
Trigger: GGTCCTTTCGTTCCGGAGGCCGCCCGGGCCCGGATGCGGGAGCCAGAGGCCAGGGAGGACTACTTCGGAATCATGCTCACATGGTCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CAA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACAGCGTCCAGGGAACCTaGCTCCCGGGCCGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDSVQGT*LPGRLQ
Trigger: TTGGAGCCGGCCCGGGAGCAAGGTTCCCTGGACGCT...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CAA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCCGGGGGCTGGACGGCTaGCTCGCGTCGCTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLRGLDG*LASLAE
Trigger: CTCGGCCAGCGACGCGAGCAAGCCGTCCAGCCCCCG...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS CCA 90 bp TTTGTTGCACTTGATACAGGTGCCGAAGTAGTCCTCCCTGGCCTCTaGCTCCCGCATCCGGGCCCGGGCGGCCTCCGGAACGAAAGGACC +
Preference number: 5 (lower is better)
Translates to: FVALDTGAEVVLPGL*LPHPGPGGLRNERT
Trigger: GGTCCTTTCGTTCCGGAGGCCGCCCGGGCCCGGATGCGGGAGCCAGAGGCCAGGGAGGACTACTTCGGCACCTGTATCAAGTGCAACAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CAA 90 bp GTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCCCACCCTGGAGCGTCCAGGGAACCTaGCTCCCGGGCCGGCTCCAA +
Preference number: 5 (lower is better)
Translates to: VPKLRLHTWEKGQSPPPWSVQGT*LPGRLQ
Trigger: TTGGAGCCGGCCCGGGAGCAAGGTTCCCTGGACGCT...CCAGGGTGGGGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CAA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGTGCATTCTTTGCCTaGGCTGGCCTCAGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: FGSPALGVLPRGLFCQACSAFFA*AGLRGA
Trigger: GGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCACT...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGCGGGGGCTGGACGGCTaGCTCGCGTCGCTGGCCGAG +
Preference number: 5 (lower is better)
Translates to: TYLASPDPCKFLRNREYRRGLDG*LASLAE
Trigger: CTCGGCCAGCGACGCGAGCAAGCCGTCCAGCCCCCG...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CAA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCATGCCGCTGGTGCGATaGCTGCAGGGCCGGCTACCT +
Preference number: 5 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLMPLVR*LQGRLP
Trigger: AGGTAGCCGGCCCTGCAGCAATCGCACCAGCGGCAT...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS-3UTR CAA 90 bp GGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCAGAGATGCCATCCAGGCACTaGTTGCAAACAATGCATCGG +
Preference number: 5 (lower is better)
Translates to: GLRPLGSSPEDSSARPAEMPSRH*LQTMHR
Trigger: CCGATGCATTGTTTGCAACAAGTGCCTGGATGGCAT...CTCTGCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACTGCAGAGTGCATTCTTaGCCTTGGCTGGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDCRVHS*PWLASE
Trigger: CTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGCA...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCGGGGGTTGTCGGGCATaGAGCCGCTGCATGTGGCAA +
Preference number: 5 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFGGCRA*SRCMWQ
Trigger: TTGCCACATGCAGCGGCTCAATGCCCGACAACCCCC...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS GCA 90 bp TGTCGGGCATTGAGCCGCTGCATGTGGCAACCATGGCAGAGCAAGTaGCCATCCAGAGGGAAACAGCAGCAGCCTTCCTCATCACTCAGC +
Preference number: 5 (lower is better)
Translates to: CRALSRCMWQPWQSK*PSRGKQQQPSSSLS
Trigger: GCTGAGTGATGAGGAAGGCTGCTGCTGTTTCCCTCTGGATGGGCACTTGCTCTGCCATGGTTGCCACATGCAGCGGCTCAATGCCCGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCATAGTTGGCAGGGGGTaGTCGGGCATTGAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFIVGRG*SGIEPL
Trigger: CAGCGGCTCAATGCCCGACAACCCCCTGCCAACTAT...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CAA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCAGTGCATTCTTTGCCTaGGCTGGCCTCAGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPSAFFA*AGLRGA
Trigger: GGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCACT...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCAGTGCATTCTTTGCCTaGGCTGGCCTCAGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLSAFFA*AGLRGA
Trigger: GGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCACT...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTGCAGAGTGCATTCTTaGCCTTGGCTGGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLCRVHS*PWLASE
Trigger: CTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGCA...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp TTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCTTCTGCCAGGCCTGCTCCAGGACCAGAACATaGCGTGACTCATGCATAATC +
Preference number: 5 (lower is better)
Translates to: FGSPALGVLPRGLFCQACSRTRT*RDSCII
Trigger: GATTATGCATGAGTCACGCAATGTTCTGGTCCTGGA...GCAGGCCTGGCAGAAGAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS GCA 90 bp CTGGCCACAGCAGTTTGTCTGCAGGGTGACAGCAGCAGCAGTGATTaGAGCTCAGATATAGTTGGCAGGGGGTTGTCGGGCATTGAGCCG +
Preference number: 5 (lower is better)
Translates to: LATAVCLQGDSSSSD*SSDIVGRGLSGIEP
Trigger: CGGCTCAATGCCCGACAACCCCCTGCCAACTATATCTGAGCTGCAATCACTGCTGCTGCTGTCACCCTGCAGACAAACTGCTGTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACCCATCCAGGCACTTGTaGCAAACAATGCATCGGAAA +
Preference number: 5 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDPSRHL*QTMHRK
Trigger: TTTCCGATGCATTGTTTGCAACAAGTGCCTGGATGG...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp CTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTGCAGGGTGACACACAGTATACTTGGTaGGAGAAGTCCACTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LGWPQRGPLATAVCLQGDTQYTW*EKSTVK
Trigger: CTTCACAGTGGACTTCTCCAACCAAGTATACTGTGT...GTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS CCA 90 bp GGCAGTCCTCACAGTGGTAGCACTCAAAGTGATAATCCCGGTCCATaGATATCACCCTCACGATGTCCTCACAGCCCTCAGAGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: GSPHSGSTQSDNPGP*ISPSRCPHSPQRGG
Trigger: TCCTCCCCTCTGAGGGCTGTGAGGACATCGTGAGGGTGATATCCATGGACCGGGATTATCACTTTGAGTGCTACCACTGTGAGGACTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS CCA 90 bp TTCTCTCCACTGCAGACTTCCAAGGATGGAGAAAAGGATCTGGCTTaGCAGAGGGCTCCGTGCAGAGGGGACCATGTGAGCATGATTCCG +
Preference number: 5 (lower is better)
Translates to: FSPLQTSKDGEKDLA*QRAPCRGDHVSMIP
Trigger: CGGAATCATGCTCACATGGTCCCCTCTGCACGGAGCCCTCTGCCAAGCCAGATCCTTTTCTCCATCCTTGGAAGTCTGCAGTGGAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS-3UTR CAA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCGGGGGTTGTCGGGCATaGAGCCGCTGCATGTGGCAA +
Preference number: 5 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVGGCRA*SRCMWQ
Trigger: TTGCCACATGCAGCGGCTCAATGCCCGACAACCCCC...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCATGCCATCCAGGCACTaGTTGCAAACAATGCATCGG +
Preference number: 5 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFMPSRH*LQTMHR
Trigger: CCGATGCATTGTTTGCAACAAGTGCCTGGATGGCAT...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CAA 90 bp TGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCCTCCCCAGAGGACTCATGCCATCCAGGCACTaGTTGCAAACAATGCATCGG +
Preference number: 5 (lower is better)
Translates to: WNIMIFGSPALGVLPRGLMPSRH*LQTMHR
Trigger: CCGATGCATTGTTTGCAACAAGTGCCTGGATGGCAT...GAGTCCTCTGGGGAGGACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCATAGTTGGCAGGGGGTaGTCGGGCATTGAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVIVGRG*SGIEPL
Trigger: CAGCGGCTCAATGCCCGACAACCCCCTGCCAACTAT...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp AGAGAAAGCAGGCTAGGCCCAGAAATCGTCTCTGGGACTTCAGTTTCCCATCAGAGAAAAGGATCTGGCTaGGCAGAGGGCTCCGTGCAG +
Preference number: 5 (lower is better)
Translates to: RESRLGPEIVSGTSVSHQRKGSG*AEGSVQ
Trigger: CTGCACGGAGCCCTCTGCCAAGCCAGATCCTTTTCT...CTGATGGGAAACTGAAGTCCCAGAGACGATTTCTGGGCCTAGCCTGCTTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS GCA 90 bp GATGTCCTCACAGCCCTCAGAGGGGAGGATGGGTTGGCCACAGGCTaGACACTTAGGAGCATAATTTTTGTGGTAGTCGGTGACACAGTA +
Preference number: 5 (lower is better)
Translates to: DVLTALRGEDGLATG*TLRSIIFVVVGDTV
Trigger: TACTGTGTCACCGACTACCACAAAAATTATGCTCCTAAGTGTGCAGCCTGTGGCCAACCCATCCTCCCCTCTGAGGGCTGTGAGGACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
ENST00000553592.5
ENST00000553911.1
ENST00000556731.5
CDS CCA 90 bp AGAGAAGGGGCTGGAACCTATCCCACAGCCCAGGTGCAAGACTTCTaGGGTCACTGCTCCCCGCTGCTGCATAATATATTTAAACCTGGA +
Preference number: 5 (lower is better)
Translates to: REGAGTYPTAQVQDF*GHCSPLLHNIFKPG
Trigger: TCCAGGTTTAAATATATTATGCAGCAGCGGGGAGCAGTGACCCCAGAAGTCTTGCACCTGGGCTGTGGGATAGGTTCCAGCCCCTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CAA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGAGGGGGTTGTCGGGCATaGAGCCGCTGCATGTGGCAA +
Preference number: 5 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPRGGCRA*SRCMWQ
Trigger: TTGCCACATGCAGCGGCTCAATGCCCGACAACCCCC...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CAA 90 bp GGGATTGTGATGGATGCAATCCGGGACCCCTCTGAGAGGTGGCAAGTGAGCTTCCCCTCTGGCGCTCAGTaGTATAAATCTGACCTCTTT +
Preference number: 5 (lower is better)
Translates to: GIVMDAIRDPSERWQVSFPSGAQ*YKSDLF
Trigger: AAAGAGGTCAGATTTATACAACTGAGCGCCAGAGGG...GAAGCTCACTTGCCACCTCTCAGAGGGGTCCCGGATTGCATCCATCACAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CAA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGCAATTCCAATTTGCTTaGGCTTCATTCCAGCCAACT +
Preference number: 5 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLQFQFA*ASFQPT
Trigger: AGTTGGCTGGAATGAAGCCAAAGCAAATTGGAATTG...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS GCA 90 bp AACCTAGAAGCCTCTTTGCCTGAGCATATCTATCCTGCTCTCAAATaGCTGTCTCCTTCCAGGGACAGACTCCATGGAGGTCAGGACTGG +
Preference number: 5 (lower is better)
Translates to: NLEASLPEHIYPALK*LSPSRDRLHGGQDW
Trigger: CCAGTCCTGACCTCCATGGAGTCTGTCCCTGGAAGGAGACAGGCATTTGAGAGCAGGATAGATATGCTCAGGCAAAGAGGCTTCTAGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS GCA 90 bp GCTGGAACCTATCCCACAGCCCAGGTGCAAGACTTCTGGGGTCACTaGTCCCCGCTGCTGCATAATATATTTAAACCTGGACTTTGTGCT +
Preference number: 5 (lower is better)
Translates to: AGTYPTAQVQDFWGH*SPLLHNIFKPGLCA
Trigger: AGCACAAAGTCCAGGTTTAAATATATTATGCAGCAGCGGGGAGCAGTGACCCCAGAAGTCTTGCACCTGGGCTGTGGGATAGGTTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS GCA 90 bp CCCAGACATACTGACCTCAGAGGGGAGGATGGGTTGGCCACAGGCTaGACACTTAGGAGCATAATTTTTGTGGTAGTCGGTGACACAGTA +
Preference number: 5 (lower is better)
Translates to: PRHTDLRGEDGLATG*TLRSIIFVVVGDTV
Trigger: TACTGTGTCACCGACTACCACAAAAATTATGCTCCTAAGTGTGCAGCCTGTGGCCAACCCATCCTCCCCTCTGAGGTCAGTATGTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555479.1
CDS-3UTR CAA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGAATAGTTGGCAGGGGGTaGTCGGGCATTGAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPRIVGRG*SGIEPL
Trigger: CAGCGGCTCAATGCCCGACAACCCCCTGCCAACTAT...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CAA 90 bp GAGAAACAGGGAATACAGGCAGCAACCCCACTCAGAGCTGGTCCCCATTCTCAGTCCAGGACCAGAACATaGCGTGACTCATGCATAATC +
Preference number: 5 (lower is better)
Translates to: EKQGIQAATPLRAGPHSQSRTRT*RDSCII
Trigger: GATTATGCATGAGTCACGCAATGTTCTGGTCCTGGA...CTGAGAATGGGGACCAGCTCTGAGTGGGGTTGCTGCCTGTATTCCCTGTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CAA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCCATCCAGGCACTTGTaGCAAACAATGCATCGGAAA +
Preference number: 5 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASPSRHL*QTMHRK
Trigger: TTTCCGATGCATTGTTTGCAACAAGTGCCTGGATGG...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTGGTGACACAGTATACTaGGTTGGAGAAGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASGDTVY*VGEVHC
Trigger: ACAGTGGACTTCTCCAACCAAGTATACTGTGTCACC...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTTGCAGAGTGCATTCTTaGCCTTGGCTGGCCTCAGAG +
Preference number: 5 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCCRVHS*PWLASE
Trigger: CTCTGAGGCCAGCCAAGGCAAAGAATGCACTCTGCA...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CAA 90 bp GTGCATTCTTTGCCTTGGCTGGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTTCCACAATCCATTaGGAATATCATGATCTTTGG +
Preference number: 5 (lower is better)
Translates to: VHSLPWLASEGPTGHSSLSSTIH*EYHDLW
Trigger: CCAAAGATCATGATATTCCAAATGGATTGTGGAAGA...CAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCCAGCCAAGGCAAAGAATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGACACAGTATACTTGGTaGGAGAAGTCCACTGTGAAG +
Preference number: 5 (lower is better)
Translates to: TYLASPDPCKFLRNREYRTQYTW*EKSTVK
Trigger: CTTCACAGTGGACTTCTCCAACCAAGTATACTGTGT...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CAA 90 bp GGGAAAAAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAAGGTGACACAGTATACTaGGTTGGAGAAGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: GKKASRPHPGKYKVSLPQGDTVY*VGEVHC
Trigger: ACAGTGGACTTCTCCAACCAAGTATACTGTGTCACC...TTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTTTTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp CTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCGCCCTCTTCCACAATCCATTaGGAATATCATGATCTTTGG +
Preference number: 5 (lower is better)
Translates to: LLCVPKLRLHTWEKGQSPSSTIH*EYHDLW
Trigger: CCAAAGATCATGATATTCCAAATGGATTGTGGAAGA...GGGCGACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS-3UTR CAA 90 bp ACCTACCTAGCCTCCCCAGACCCATGTAAGTTCCTGAGAAACAGGGAATACAGGAACCTAGAAGCCTCTTaGCCTGAGCATATCTATCCT +
Preference number: 5 (lower is better)
Translates to: TYLASPDPCKFLRNREYRNLEAS*PEHIYP
Trigger: AGGATAGATATGCTCAGGCAAAGAGGCTTCTAGGTT...CCTGTATTCCCTGTTTCTCAGGAACTTACATGGGTCTGGGGAGGCTAGGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CAA 90 bp AAGGCCAGTCGCCCCCACCCTGGTAAATATAAGGTTTCTCTTCCACAATCCATTGGTGACACAGTATACTaGGTTGGAGAAGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: KASRPHPGKYKVSLPQSIGDTVY*VGEVHC
Trigger: ACAGTGGACTTCTCCAACCAAGTATACTGTGTCACC...AATGGATTGTGGAAGAGAAACCTTATATTTACCAGGGTGGGGGCGACTGGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS TCA 90 bp TTCCTCCTAACTGCTGTCTGTCCTTCCCCGCACAAAAATTCCATCTaGTGCAATTCCAATTTGCTTTGGCTTCATTCCAGCCAACTTCCC +
Preference number: 5 (lower is better)
Translates to: FLLTAVCPSPHKNSI*CNSNLLWLHSSQLP
Trigger: GGGAAGTTGGCTGGAATGAAGCCAAAGCAAATTGGAATTGCATCAGATGGAATTTTTGTGCGGGGAAGGACAGACAGCAGTTAGGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CAA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTACACAGTATACTTGGTaGGAGAAGTCCACTGTGAAG +
Preference number: 5 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCTQYTW*EKSTVK
Trigger: CTTCACAGTGGACTTCTCCAACCAAGTATACTGTGT...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000397388.7
CDS-3UTR CAA 90 bp GAACCCTCCTGTGTGTGCCTAAGCTCAGACTGCACACATGGGAAAAAGGCCAGTCTCATGCCTATTCATTaGTTTAAGATATACTGGCCT +
Preference number: 5 (lower is better)
Translates to: EPSCVCLSSDCTHGKKASLMPIH*FKIYWP
Trigger: AGGCCAGTATATCTTAAACAAATGAATAGGCATGAG...ACTGGCCTTTTTCCCATGTGTGCAGTCTGAGCTTAGGCACACACAGGAGGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CAA 90 bp GTTTCTACCTCTTCATCCAGATATAGGTGCGGGACCCCATATCTGACACCATGTTATGTATTTCCCAGGTaGGCTGGCATAGTCACCTTA +
Preference number: 5 (lower is better)
Translates to: VSTSSSRYRCGTPYLTPCYVFPR*AGIVTL
Trigger: TAAGGTGACTATGCCAGCCAACCTGGGAAATACATA...ACATGGTGTCAGATATGGGGTCCCGCACCTATATCTGGATGAAGAGGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS TCA 90 bp AGGAAGCCACCTGGGAGAGTAAAGCCAACTACGTGCTGGAATACGTaGGCTCTTAATAAGGTGCTATATGATTTGCATAGAGAGAACCAC +
Preference number: 5 (lower is better)
Translates to: RKPPGRVKPTTCWNT*ALNKVLYDLHRENH
Trigger: GTGGTTCTCTCTATGCAAATCATATAGCACCTTATTAAGAGCTCACGTATTCCAGCACGTAGTTGGCTTTACTCTCCCAGGTGGCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CAA 90 bp ATATGGCTCAGTGCACCTAAACTTGGGAATGTGGCTAAGCTGAAGCTTCCTAGAATAGAGAGAACCACATaGTTAACAGGCCTTTCCCTC +
Preference number: 5 (lower is better)
Translates to: IWLSAPKLGNVAKLKLPRIERTT*LTGLSL
Trigger: GAGGGAAAGGCCTGTTAACAATGTGGTTCTCTCTAT...TCTAGGAAGCTTCAGCTTAGCCACATTCCCAAGTTTAGGTGCACTGAGCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS GCA 90 bp CTACGTGCTGGAATACGTGAGCTCTTAATAAGGTGCTATATGATTTaGATAGAGAGAACCACATTGTTAACAGGCCTTTCCCTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: LRAGIRELLIRCYMI*IERTTLLTGLSLWD
Trigger: GTCCCAGAGGGAAAGGCCTGTTAACAATGTGGTTCTCTCTATGCAAATCATATAGCACCTTATTAAGAGCTCACGTATTCCAGCACGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CAA 90 bp CTTCCACAATCCATTTGGAATATCATGATCTTTGGGTCTCCGGCCCTTGGGGTCAAGGTGCTATATGATTaGCATAGAGAGAACCACATT +
Preference number: 5 (lower is better)
Translates to: LPQSIWNIMIFGSPALGVKVLYD*HRENHI
Trigger: AATGTGGTTCTCTCTATGCAAATCATATAGCACCTT...GACCCCAAGGGCCGGAGACCCAAAGATCATGATATTCCAAATGGATTGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS-3UTR CAA 90 bp CAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTAGAATACCATCCAGGCACTTGTaGCAAACAATGCATCGGAAA +
Preference number: 5 (lower is better)
Translates to: QRSLLCISQVGWHSHLRIPSRHL*QTMHRK
Trigger: TTTCCGATGCATTGTTTGCAACAAGTGCCTGGATGG...TATTCTAAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS-3UTR CAA 90 bp CTCACTCAGAGATCTCTTTTATGTATTTCCCAGGTTGGCTGGCATAGTCACCTTAATGTGGAAATTCTGTaGTCAGGAGTCATCATTTCC +
Preference number: 5 (lower is better)
Translates to: LTQRSLLCISQVGWHSHLNVEIL*SGVIIS
Trigger: GGAAATGATGACTCCTGACAACAGAATTTCCACATT...AAGGTGACTATGCCAGCCAACCTGGGAAATACATAAAAGAGATCTCTGAGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262713.7
CDS GCA 72 bp GGCGGACGGGACCCCTCCGGGAGAATAGCCTGCCGGTaGTCCGGCCAGGGGTGGGCCAAACAGGCACGGCCC +
Preference number: 6 (lower is better)
Translates to: GGRDPSGRIACR*SGQGWAKQARP
Trigger: GGGCCGTGCCTGTTTGGCCCACCCCTGGCCGGAGCACCGGCAGGCTATTCTCCCGGAGGGGTCCCGTCCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS CCA 72 bp AGAGCTCCAGGGCTGCCCAGGGCCGGGGGATACGAGTaGCGGCTTTCCTGGCAGCCGAACCCCGCGGGCCGC +
Preference number: 6 (lower is better)
Translates to: RAPGLPRAGGYE*RLSWQPNPAGR
Trigger: GCGGCCCGCGGGGTTCGGCTGCCAGGAAAGCCGCCACTCGTATCCCCCGGCCCTGGGCAGCCCTGGAGCTCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS CCA 72 bp CCGGGCCCGGGCGGCCTCCGGAACGAAAGGACCTGGTaGCTCCTCCAGACCCGACGGCTCAATCCCCGAGGG +
Preference number: 6 (lower is better)
Translates to: PGPGGLRNERTW*LLQTRRLNPRG
Trigger: CCCTCGGGGATTGAGCCGTCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTTCCGGAGGCCGCCCGGGCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000553736.1
CDS TCA 72 bp TGGCGGCTTTCCTGGCAGCCGAACCCCGCGGGCCGCTaGGCGTACAATCGGTCCAGGGCGGCGTGGAGCTCC +
Preference number: 6 (lower is better)
Translates to: WRLSWQPNPAGR*AYNRSRAAWSS
Trigger: GGAGCTCCACGCCGCCCTGGACCGATTGTACGCTCAGCGGCCCGCGGGGTTCGGCTGCCAGGAAAGCCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS GCA 72 bp CGGGTAGGCGGACGGGACCCCTCCGGGAGAATAGCCTaGCGGTGCTCCGGCCAGGGGTGGGCCAAACAGGCA +
Preference number: 6 (lower is better)
Translates to: RVGGRDPSGRIA*RCSGQGWAKQA
Trigger: TGCCTGTTTGGCCCACCCCTGGCCGGAGCACCGGCAGGCTATTCTCCCGGAGGGGTCCCGTCCGCCTACCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS CAA 72 bp CCGTCCAGCAGCAGGCTGCCCCGGGGGCTGGACGGCTaGCTCGCGTCGCTGGCCGAGCTACTGGCGAAGCTA +
Preference number: 6 (lower is better)
Translates to: PSSSRLPRGLDG*LASLAELLAKL
Trigger: TAGCTTCGCCAGTAGCTCGGCCAGCGACGCGAGCAAGCCGTCCAGCCCCCGGGGCAGCCTGCTGCTGGACGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS CCA 72 bp CATCCGGGCCCGGGCGGCCTCCGGAACGAAAGGACCTaGTGGCTCCTCCAGACCCGACGGCTCAATCCCCGA +
Preference number: 6 (lower is better)
Translates to: HPGPGGLRNERT*WLLQTRRLNPR
Trigger: TCGGGGATTGAGCCGTCGGGTCTGGAGGAGCCACCAGGTCCTTTCGTTCCGGAGGCCGCCCGGGCCCGGATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000553736.1
CDS CAA 72 bp GGAGCCGCGCTGATTTCGCTCAGCGTCCAGGGAACCTaGCTCCCGGGCCGGCTCCAACGGCTCATCCCCAGG +
Preference number: 6 (lower is better)
Translates to: GAALISLSVQGT*LPGRLQRLIPR
Trigger: CCTGGGGATGAGCCGTTGGAGCCGGCCCGGGAGCAAGGTTCCCTGGACGCTGAGCGAAATCAGCGCGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS CAA 90 bp CGCCTCAAAGGAGCCGCGCTGATTTCGCTCAGCGTCCAGGGAACCTaGCTCCCGGGCCGGCTCCAACGGCTCATCCCCAGGTCCCCCAGT +
Preference number: 6 (lower is better)
Translates to: RLKGAALISLSVQGT*LPGRLQRLIPRSPS
Trigger: ACTGGGGGACCTGGGGATGAGCCGTTGGAGCCGGCCCGGGAGCAAGGTTCCCTGGACGCTGAGCGAAATCAGCGCGGCTCCTTTGAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS CCA 72 bp CACCCTTTCTGCGGCCGAACTTCTCCAGCAGGCGACTaGCTTTCTCTCCTAACCGCTCCATGCCCTCGGGCC +
Preference number: 6 (lower is better)
Translates to: HPFCGRTSPAGD*LSLLTAPCPRA
Trigger: GGCCCGAGGGCATGGAGCGGTTAGGAGAGAAAGCCAGTCGCCTGCTGGAGAAGTTCGGCCGCAGAAAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262713.7
ENST00000361265.8
CDS GCA 72 bp GGCCTCAGAGGGGCCCACTGGCCACAGCAGTTTGTCTaGAGGGTGACAGCAGCAGCAGTGATTGCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: GLRGAHWPQQFV*RVTAAAVIAAQ
Trigger: CTGAGCTGCAATCACTGCTGCTGCTGTCACCCTGCAGACAAACTGCTGTGGCCAGTGGGCCCCTCTGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS CCA 72 bp CTGCAGACTTCCAAGGATGGAGAAAAGGATCTGGCTTaGCAGAGGGCTCCGTGCAGAGGGGACCATGTGAGC +
Preference number: 6 (lower is better)
Translates to: LQTSKDGEKDLA*QRAPCRGDHVS
Trigger: GCTCACATGGTCCCCTCTGCACGGAGCCCTCTGCCAAGCCAGATCCTTTTCTCCATCCTTGGAAGTCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS CAA 90 bp GACAGCAGCAGCAGTGATTGCAGCTCAGATATAGTTGGCAGGGGGTaGTCGGGCATTGAGCCGCTGCATGTGGCAACCATGGCAGAGCAA +
Preference number: 6 (lower is better)
Translates to: DSSSSDCSSDIVGRG*SGIEPLHVATMAEQ
Trigger: TTGCTCTGCCATGGTTGCCACATGCAGCGGCTCAATGCCCGACAACCCCCTGCCAACTATATCTGAGCTGCAATCACTGCTGCTGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS TCA 72 bp CAGCTCAGATATAGTTGGCAGGGGGTTGTCGGGCATTaGGCCGCTGCATGTGGCAACCATGGCAGAGCAAGT +
Preference number: 6 (lower is better)
Translates to: QLRYSWQGVVGH*AAACGNHGRAS
Trigger: ACTTGCTCTGCCATGGTTGCCACATGCAGCGGCTCAATGCCCGACAACCCCCTGCCAACTATATCTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS CAA 72 bp ACTGCAGACTTCCAAGGATGGAGAAAAGGATCTGGCTaGGCAGAGGGCTCCGTGCAGAGGGGACCATGTGAG +
Preference number: 6 (lower is better)
Translates to: TADFQGWRKGSG*AEGSVQRGPCE
Trigger: CTCACATGGTCCCCTCTGCACGGAGCCCTCTGCCAAGCCAGATCCTTTTCTCCATCCTTGGAAGTCTGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS CAA 90 bp CCCCAAGAGGCAGAGTCACACGGGAATCTTCACAGAGTACATTCCTaGGCACTACCACTTCTGGCAGGAGGCCAGGCAGCATGTCCCTAT +
Preference number: 6 (lower is better)
Translates to: PQEAESHGNLHRVHS*ALPLLAGGQAACPY
Trigger: ATAGGGACATGCTGCCTGGCCTCCTGCCAGAAGTGGTAGTGCCAAGGAATGTACTCTGTGAAGATTCCCGTGTGACTCTGCCTCTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555479.1
CDS CAA 72 bp AGCAGTGATTGCAGCTCAGATATAGTTGGCAGGGGGTaGTCGGGCATTGAGCCGCTGCATGTGGCAACCATG +
Preference number: 6 (lower is better)
Translates to: SSDCSSDIVGRG*SGIEPLHVATM
Trigger: CATGGTTGCCACATGCAGCGGCTCAATGCCCGACAACCCCCTGCCAACTATATCTGAGCTGCAATCACTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
CDS CAA 72 bp GCAGAGTCACACGGGAATCTTCACAGAGTACATTCCTaGGCACTACCACTTCTGGCAGGAGGCCAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: AESHGNLHRVHS*ALPLLAGGQAA
Trigger: TGCTGCCTGGCCTCCTGCCAGAAGTGGTAGTGCCAAGGAATGTACTCTGTGAAGATTCCCGTGTGACTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555479.1
CDS CAA 90 bp TTTCTCTCCACTGCAGACTTCCAAGGATGGAGAAAAGGATCTGGCTaGGCAGAGGGCTCCGTGCAGAGGGGACCATGTGAGCATGATTCC +
Preference number: 6 (lower is better)
Translates to: FLSTADFQGWRKGSG*AEGSVQRGPCEHDS
Trigger: GGAATCATGCTCACATGGTCCCCTCTGCACGGAGCCCTCTGCCAAGCCAGATCCTTTTCTCCATCCTTGGAAGTCTGCAGTGGAGAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000553736.1
CDS GCA 72 bp ACAGCCCTCAGAGGGGAGGATGGGTTGGCCACAGGCTaGACACTTAGGAGCATAATTTTTGTGGTAGTCGGT +
Preference number: 6 (lower is better)
Translates to: TALRGEDGLATG*TLRSIIFVVVG
Trigger: ACCGACTACCACAAAAATTATGCTCCTAAGTGTGCAGCCTGTGGCCAACCCATCCTCCCCTCTGAGGGCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
ENST00000553592.5
ENST00000553911.1
ENST00000556731.5
CDS CCA 72 bp GCTGGAACCTATCCCACAGCCCAGGTGCAAGACTTCTaGGGTCACTGCTCCCCGCTGCTGCATAATATATTT +
Preference number: 6 (lower is better)
Translates to: AGTYPTAQVQDF*GHCSPLLHNIF
Trigger: AAATATATTATGCAGCAGCGGGGAGCAGTGACCCCAGAAGTCTTGCACCTGGGCTGTGGGATAGGTTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397388.7
ENST00000553911.1
CDS TCA 72 bp CCCTCTGGGACCCTTCAACCTAGAAGCCTCTTTGCCTaGGCATATCTATCCTGCTCTCAAATGCCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: PSGTLQPRSLFA*AYLSCSQMPVS
Trigger: GGAGACAGGCATTTGAGAGCAGGATAGATATGCTCAGGCAAAGAGGCTTCTAGGTTGAAGGGTCCCAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS GCA 72 bp ACTGACCTCAGAGGGGAGGATGGGTTGGCCACAGGCTaGACACTTAGGAGCATAATTTTTGTGGTAGTCGGT +
Preference number: 6 (lower is better)
Translates to: TDLRGEDGLATG*TLRSIIFVVVG
Trigger: ACCGACTACCACAAAAATTATGCTCCTAAGTGTGCAGCCTGTGGCCAACCCATCCTCCCCTCTGAGGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555479.1
CDS CCA 72 bp CACAGTGGTAGCACTCAAAGTGATAATCCCGGTCCATaGATATCACCCTCACGATGTCCTCACAGCCCTCAG +
Preference number: 6 (lower is better)
Translates to: HSGSTQSDNPGP*ISPSRCPHSPQ
Trigger: CTGAGGGCTGTGAGGACATCGTGAGGGTGATATCCATGGACCGGGATTATCACTTTGAGTGCTACCACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262713.7
ENST00000361265.8
ENST00000397388.7
ENST00000553592.5
ENST00000556731.5
CDS GCA 72 bp TATCCCACAGCCCAGGTGCAAGACTTCTGGGGTCACTaGTCCCCGCTGCTGCATAATATATTTAAACCTGGA +
Preference number: 6 (lower is better)
Translates to: YPTAQVQDFWGH*SPLLHNIFKPG
Trigger: TCCAGGTTTAAATATATTATGCAGCAGCGGGGAGCAGTGACCCCAGAAGTCTTGCACCTGGGCTGTGGGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS GCA 72 bp CCCAGGTGCAAGACTTCTGGGGTCACTGCTCCCCGCTaGTGCATAATATATTTAAACCTGGACTTTGTGCTT +
Preference number: 6 (lower is better)
Translates to: PRCKTSGVTAPR*CIIYLNLDFVL
Trigger: AAGCACAAAGTCCAGGTTTAAATATATTATGCAGCAGCGGGGAGCAGTGACCCCAGAAGTCTTGCACCTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS CAA 72 bp ATAAGGTGCTATATGATTTGCATAGAGAGAACCACATaGTTAACAGGCCTTTCCCTCTGGGACCCTTCAACC +
Preference number: 6 (lower is better)
Translates to: IRCYMICIERTT*LTGLSLWDPST
Trigger: GGTTGAAGGGTCCCAGAGGGAAAGGCCTGTTAACAATGTGGTTCTCTCTATGCAAATCATATAGCACCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397388.7
CDS TCA 72 bp CCTGGGAGAGTAAAGCCAACTACGTGCTGGAATACGTaGGCTCTTAATAAGGTGCTATATGATTTGCATAGA +
Preference number: 6 (lower is better)
Translates to: PGRVKPTTCWNT*ALNKVLYDLHR
Trigger: TCTATGCAAATCATATAGCACCTTATTAAGAGCTCACGTATTCCAGCACGTAGTTGGCTTTACTCTCCCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397388.7