Pregenerated sensors for AIMP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000106305Ensembl transcript IDs: ENST00000223029.8, ENST00000395236.2, ENST00000400479.6, ENST00000415999.1
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTAGCCACACTGTCCGAGGAGTTCCTAAACCACCACCCTGGCTCTaGCCACAGATCTTCACATGTGCTGTTCCCTCCATCTGCATCACT | + |
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Preference number: 1 (lower is better) Translates to: SSHTVRGVPKPPPWL*PQIFTCAVPSICIT Trigger: AGTGATGCAGATGGAGGGAACAGCACATGTGAAGATCTGTGGTCAGAGCCAGGGTGGTGGTTTAGGAACTCCTCGGACAGTGTGGCTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR GCA 90 bp | AGAGACAGGTTAGACTCTTCCTCACCCAATTTCGTCCTTTGCCTGTaGTCTAGCCACACTGTCCGAGGAGTTCCTAAACCACCACCCTGG | + |
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Preference number: 1 (lower is better) Translates to: RDRLDSSSPNFVLCL*SSHTVRGVPKPPPW Trigger: CCAGGGTGGTGGTTTAGGAACTCCTCGGACAGTGTGGCTAGAGCACAGGCAAAGGACGAAATTGGGTGAGGAAGAGTCTAACCTGTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR GCA 90 bp | GCTTGCAGAGACAGGTTAGACTCTTCCTCACCCAATTTCGTCCTTTaGCTGTGCTCTAGCCACACTGTCCGAGGAGTTCCTAAACCACCA | + |
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Preference number: 1 (lower is better) Translates to: ACRDRLDSSSPNFVL*LCSSHTVRGVPKPP Trigger: TGGTGGTTTAGGAACTCCTCGGACAGTGTGGCTAGAGCACAGGCAAAGGACGAAATTGGGTGAGGAAGAGTCTAACCTGTCTCTGCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR CCA 90 bp | TCAACTGCAGCTTTCAACTCATACAGACGTTTTAAAATATCATCTTaGCGGGACTCAAGAGCTTGCAGAGACAGGTTAGACTCTTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: STAAFNSYRRFKISS*RDSRACRDRLDSSS Trigger: TGAGGAAGAGTCTAACCTGTCTCTGCAAGCTCTTGAGTCCCGCCAAGATGATATTTTAAAACGTCTGTATGAGTTGAAAGCTGCAGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR-3UTR TCA 90 bp | ACCACCACCCTGGCTCTGACCACAGATCTTCACATGTGCTGTTCCCTCCATCTGTGCCAATTAAATTATTaGGTGCTGGCTAGGCACAGT | + |
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Preference number: 2 (lower is better) Translates to: TTTLALTTDLHMCCSLHLCQLNY*VLARHS Trigger: ACTGTGCCTAGCCAGCACTCAATAATTTAATTGGCA...CAGATGGAGGGAACAGCACATGTGAAGATCTGTGGTCAGAGCCAGGGTGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR-3UTR GCA 90 bp | GAATCATCTTGGAGAGGCCATCAACTGCAGCTTTCAACTCATACAGACGTTTTACCCAATTTCGTCCTTTaGCTGTGCTCTAGCCACACT | + |
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Preference number: 2 (lower is better) Translates to: ESSWRGHQLQLSTHTDVLPNFVL*LCSSHT Trigger: AGTGTGGCTAGAGCACAGGCAAAGGACGAAATTGGG...TAAAACGTCTGTATGAGTTGAAAGCTGCAGTTGATGGCCTCTCCAAGATGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR-3UTR GCA 90 bp | CGTTTTAAAATATCATCTTGGCGGGACTCAAGAGCTTGCAGAGACAGGTTAGACCCTCTCCTAGTCTGCTaGTCTTATTTAAGATCAAAC | + |
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Preference number: 2 (lower is better) Translates to: RFKISSWRDSRACRDRLDPLLVC*SYLRSN Trigger: GTTTGATCTTAAATAAGAGCAGCAGACTAGGAGAGG...GTCTAACCTGTCTCTGCAAGCTCTTGAGTCCCGCCAAGATGATATTTTAAAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTCTGACCACAGATCTTCACATGTGCTGTTCCCTCCATCTGCATCACTCTTGTAATCTCAGCACTTaGGAAGGGCGAGGCGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LALTTDLHMCCSLHLHHSCNLST*EGRGGW Trigger: CCACCCGCCTCGCCCTTCCAAAGTGCTGAGATTACA...AGAGTGATGCAGATGGAGGGAACAGCACATGTGAAGATCTGTGGTCAGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR GCA 72 bp | TCGGGCTTAATCAGCACTTTCTCACCTCTCCTAGTCTaGTGCTCTTATTTAAGATCAAACGTCAGAGAAATG | + |
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Preference number: 3 (lower is better) Translates to: SGLISTFSPLLV*CSYLRSNVREM Trigger: CATTTCTCTGACGTTTGATCTTAAATAAGAGCAGCAGACTAGGAGAGGTGAGAAAGTGCTGATTAAGCCCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| 3UTR CCA 72 bp | GCTTTCAACTCATACAGACGTTTTAAAATATCATCTTaGCGGGACTCAAGAGCTTGCAGAGACAGGTTAGAC | + |
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Preference number: 3 (lower is better) Translates to: AFNSYRRFKISS*RDSRACRDRLD Trigger: GTCTAACCTGTCTCTGCAAGCTCTTGAGTCCCGCCAAGATGATATTTTAAAACGTCTGTATGAGTTGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR CCA 90 bp | GACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCAGACTCTTCCTGCACGTaGCCAGCGCCCGGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: DSDSNTSPLTDNRHERAPDSSCT*PAPGAG Trigger: CCCAGCGCCGGGCGCTGGCCACGTGCAGGAAGAGTC...TGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGCCATCAACTGCAGCTTTCAACTCATACAGACGTTTTAAAATATCATCTTGGAGAGGCTGCACGTaGCCAGCGCCCGGCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ERPSTAAFNSYRRFKISSWRGCT*PAPGAG Trigger: CCCAGCGCCGGGCGCTGGCCACGTGCAGCCTCTCCA...AGATGATATTTTAAAACGTCTGTATGAGTTGAAAGCTGCAGTTGATGGCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR GCA 90 bp | CTAAACCACCACCCTGGCTCTGACCACAGATCTTCACATGTGCTGTTCCCTCCACCCAATTTCGTCCTTTaGCTGTGCTCTAGCCACACT | + |
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Preference number: 4 (lower is better) Translates to: LNHHPGSDHRSSHVLFPPPNFVL*LCSSHT Trigger: AGTGTGGCTAGAGCACAGGCAAAGGACGAAATTGGG...TGGAGGGAACAGCACATGTGAAGATCTGTGGTCAGAGCCAGGGTGGTGGTTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR GCA 90 bp | GACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCAACCGAGGAGTGCGTGTaGACCGTGGACAGGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: DSDSNTSPLTDNRHERAPTEECV*TVDRTL Trigger: CAGGGTCCTGTCCACGGTGCACACGCACTCCTCGGT...TGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR TCA 90 bp | CACCACCCTGGCTCTGACCACAGATCTTCACATGTGCTGTTCCCTCCATCTGCATGCCAATTAAATTATTaGGTGCTGGCTAGGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: HHPGSDHRSSHVLFPPSACQLNY*VLARHS Trigger: ACTGTGCCTAGCCAGCACTCAATAATTTAATTGGCA...TGCAGATGGAGGGAACAGCACATGTGAAGATCTGTGGTCAGAGCCAGGGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR GCA 90 bp | GACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCACTCTTGACCGAGGAGTaGGTGTGCACCGTGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: DSDSNTSPLTDNRHERAPLLTEE*VCTVDR Trigger: CCTGTCCACGGTGCACACGCACTCCTCGGTCAAGAG...TGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR TCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCCCGTGGACAGGACCCTaGAGTGCTCACAGAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPPWTGP*SAHRAA Trigger: GGCTGCTCTGTGAGCACTTCAGGGTCCTGTCCACGG...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR GCA 90 bp | ACCACCACCCTGGCTCTGACCACAGATCTTCACATGTGCTGTTCCCTCCATCTGTCACCTCTCCTAGTCTaGTGCTCTTATTTAAGATCA | + |
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Preference number: 4 (lower is better) Translates to: TTTLALTTDLHMCCSLHLSPLLV*CSYLRS Trigger: TGATCTTAAATAAGAGCAGCAGACTAGGAGAGGTGA...CAGATGGAGGGAACAGCACATGTGAAGATCTGTGGTCAGAGCCAGGGTGGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR GCA 90 bp | CTGGCTCTGACCACAGATCTTCACATGTGCTGTTCCCTCCATCTGCATCACTCTACAGATCTTCACATGTaGTGTTCCCTCCATCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: LALTTDLHMCCSLHLHHSTDLHM*CSLHLH Trigger: ATGCAGATGGAGGGAACAGCACATGTGAAGATCTGT...AGAGTGATGCAGATGGAGGGAACAGCACATGTGAAGATCTGTGGTCAGAGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR TCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCCCACGTCTGCTACGGTaGGTTCATTCCCAGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPPRLLR*VHSQRA Trigger: GGCTCGCTGGGAATGAACTCACCGTAGCAGACGTGG...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR GCA 90 bp | TCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCCTGCAGCCTCCGATCTaGTGGAGTACAGACCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SDSNTSPLTDNRHERAPFLQPPI*WSTDHS Trigger: GCTGTGGTCTGTACTCCAGCAGATCGGAGGCTGCAG...GAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | GACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATCCACCTCTGCACATTaGCTGGCACTGTCACACTGC | + |
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Preference number: 4 (lower is better) Translates to: DSDSNTSPLTDNRHERAPSTSAH*LALSHC Trigger: GCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGA...TGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR TCA 90 bp | TCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCAGGCCGGGTTTGCGTTaGTCACGATGTCTTTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: SDSNTSPLTDNRHERAPFRPGLR*SRCLSA Trigger: CGCTGAAAGACATCGTGATCAACGCAAACCCGGCCT...GAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR TCA 90 bp | TCTCCTAGTCTGCTGCTCTTATTTAAGATCAAACGTCAGAGAAATGTGAAGTCCCCACCACCCTGGCTCTaGCCACAGATCTTCACATGT | + |
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Preference number: 4 (lower is better) Translates to: SPSLLLLFKIKRQRNVKSPPPWL*PQIFTC Trigger: ACATGTGAAGATCTGTGGTCAGAGCCAGGGTGGTGG...GGACTTCACATTTCTCTGACGTTTGATCTTAAATAAGAGCAGCAGACTAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR GCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCGACAGGACCCTGAAGTaGTCACAGAGCAGCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPDRTLK*SQSSLC Trigger: GCACAGGCTGCTCTGTGAGCACTTCAGGGTCCTGTC...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR GCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCCTGGCACTGTCACACTaGAGCCTCCGATCTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPLALSH*SLRSAG Trigger: TCCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAG...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCCCTCTGCACATTGGCTaGCACTGTCACACTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPPLHIG*HCHTAA Trigger: GGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGG...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR GCA 90 bp | TCACTTGAGGTCAGGAGTTCGAGAGGACAACATGATGAAACTCCATTTCTACTGGGAGAGGCCATCAACTaGAGCTTTCAACTCATACAG | + |
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Preference number: 4 (lower is better) Translates to: SLEVRSSRGQHDETPFLLGEAIN*SFQLIQ Trigger: CTGTATGAGTTGAAAGCTGCAGTTGATGGCCTCTCC...CAGTAGAAATGGAGTTTCATCATGTTGTCCTCTCGAACTCCTGACCTCAAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR GCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCGACCTCATCCACCTCTaGACATTGGCTGGCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPDLIHL*TLAGTV Trigger: GACAGTGCCAGCCAATGTGCAGAGGTGGATGAGGTC...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCTTGTTTGCTTAACTCCTATTTACCTTCGGGCTTAATCAGCACTTTCTGTAATCCCAGCTACTaGAGAGGCTGCACGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FFSCLLNSYLPSGLISTFCNPSY*RGCTWP Trigger: TGGCCACGTGCAGCCTCTCCAGTAGCTGGGATTACA...GAAAGTGCTGATTAAGCCCGAAGGTAAATAGGAGTTAAGCAAACAAGAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR TCA 90 bp | AATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTTTTCAGGCACGCTCTTaGCCGAGGAGTGCGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: NTSPLTDNRHERAPFLKSFQARS*PRSACA Trigger: TGCACACGCACTCCTCGGTCAAGAGCGTGCCTGAAA...AGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | GACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATGGTGGTTAAAGTCGTaGGCTCATCCGCTTGGATTA | + |
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Preference number: 4 (lower is better) Translates to: DSDSNTSPLTDNRHERAPWWLKS*AHPLGL Trigger: TAATCCAAGCGGATGAGCCCACGACTTTAACCACCA...TGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | AATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTTCCCTTCGCCTTCGATaGGGCACATCGTCTGGATGC | + |
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Preference number: 4 (lower is better) Translates to: NTSPLTDNRHERAPFLKSSLRLR*GTSSGC Trigger: GCATCCAGACGATGTGCCCCATCGAAGGCGAAGGGA...AGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | AATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTCAGCCTCCGATCTGCTaGAGTACAGACCACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: NTSPLTDNRHERAPFLKSQPPIC*STDHST Trigger: GGTGCTGTGGTCTGTACTCCAGCAGATCGGAGGCTG...AGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| 3UTR CAA 72 bp | TCCCTCCATCTGCATCACTCTTCCTTCTTCTCTTGTTaGCTTAACTCCTATTTACCTTCGGGCTTAATCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLHLHHSSFFSC*LNSYLPSGLIS Trigger: GCTGATTAAGCCCGAAGGTAAATAGGAGTTAAGCAAACAAGAGAAGAAGGAAGAGTGATGCAGATGGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR GCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGAGGGGAGGCCGGGTTTaGGTTGATCACGATGTCTTT | + |
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Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKERGGRV*VDHDVF Trigger: AAAGACATCGTGATCAACGCAAACCCGGCCTCCCCT...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR GCA 90 bp | AATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTCCACAGCACCACGTCTaGTACGGTGAGTTCATTCCC | + |
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Preference number: 4 (lower is better) Translates to: NTSPLTDNRHERAPFLKSPQHHV*YGEFIP Trigger: GGGAATGAACTCACCGTAGCAGACGTGGTGCTGTGG...AGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR GCA 90 bp | CCTTCGGGCTTAATCAGCACTTTCTCACCTCTCCTAGTCTGCTGCTCTTATTTACCTCTCCTAGTCTGCTaGTCTTATTTAAGATCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PSGLISTFSPLLVCCSYLPLLVC*SYLRSN Trigger: GTTTGATCTTAAATAAGAGCAGCAGACTAGGAGAGG...TAAATAAGAGCAGCAGACTAGGAGAGGTGAGAAAGTGCTGATTAAGCCCGAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
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| CDS-3UTR CCA 90 bp | TCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCATGGGGCACATCGTCTaGATGCTGAATTTCATCTGC | + |
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Preference number: 4 (lower is better) Translates to: SDSNTSPLTDNRHERAPFMGHIV*MLNFIC Trigger: GCAGATGAAATTCAGCATCCAGACGATGTGCCCCAT...GAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCCAAGAGCAGAGTTCATaGAGCGGAAAACAGCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPQEQSS*SGKQRL Trigger: AAGCCGCTGTTTTCCGCTCCATGAACTCTGCTCTTG...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR TCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGGTTCTCCAAAGCACTTaGGAAGGTTTTCAGGCACGC | + |
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Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKEVLQST*EGFQAR Trigger: GCGTGCCTGAAAACCTTCTCAAGTGCTTTGGAGAAC...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGAGTCCAGCGCATTGGTaGTTAAAGTCGTGGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKESPAHW*LKSWAH Trigger: ATGAGCCCACGACTTTAACCACCAATGCGCTGGACT...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR TCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGATCCTTCCCAAGCACTaGATTCAAGTCCAGCGCATT | + |
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Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKEILPKH*IQVQRI Trigger: AATGCGCTGGACTTGAATTCAGTGCTTGGGAAGGAT...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGGGAGAGGCCATCAACTaGAGCTTTCAACTCATACAG | + |
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Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKEGEAIN*SFQLIQ Trigger: CTGTATGAGTTGAAAGCTGCAGTTGATGGCCTCTCC...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR CCA 90 bp | AATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTTCAAGTCCAGCGCATTaGTGGTTAAAGTCGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: NTSPLTDNRHERAPFLKSSSPAH*WLKSWA Trigger: AGCCCACGACTTTAACCACCAATGCGCTGGACTTGA...AGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR TCA 90 bp | AATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTACATCGTCTGGATGCTaGATTTCATCTGCGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: NTSPLTDNRHERAPFLKSTSSGC*ISSASS Trigger: CGAAGACGCAGATGAAATTCAGCATCCAGACGATGT...AGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGAGAGAACAAGAAACGTaGAATGTTCCCTTCGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKEREQET*NVPFAF Trigger: GAAGGCGAAGGGAACATTGCACGTTTCTTGTTCTCT...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTTCTCTTGTTTGCTTAACTCCTATTTACCTTCGGGCTTAATCAGCACTTTTAAAATATCATCTTaGCGGGACTCAAGAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SFFSCLLNSYLPSGLISTFKISS*RDSRAC Trigger: GCAAGCTCTTGAGTCCCGCCAAGATGATATTTTAAA...AGTGCTGATTAAGCCCGAAGGTAAATAGGAGTTAAGCAAACAAGAGAAGAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415999.1 |
||
| CDS-3UTR GCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCGGTTACATCCAAGTCTaGATCTGGTGTTTGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPGYIQV*IWCLNH Trigger: ATGATTCAAACACCAGATGCAGACTTGGATGTAACC...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CCA 90 bp | AATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTGTGTTTGAATCATCTTaGAGAGGCCATCAACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTSPLTDNRHERAPFLKSVFESS*RGHQLQ Trigger: CTGCAGTTGATGGCCTCTCCAAGATGATTCAAACAC...AGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CCA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCATCCAAGTCTGCATCTaGTGTTTGAATCATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPLTDNRHERAPFLKSKPIQVCI*CLNHLG Trigger: TCCAAGATGATTCAAACACCAGATGCAGACTTGGAT...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGACAGCATTATGCTTCTaGCCAAACAGAGAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKETALCF*PNRENK Trigger: CTTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGT...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR GCA 90 bp | AGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCTTTAAAATCAGTTACGGCGCTATCTATAAGGGTTaGGTTGACAGCATTATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHERAPFLKSKPFKISYGAIYKG*VDSIML Trigger: AAGCATAATGCTGTCAACGCAACCCTTATAGATAGC...GCCGTAACTGATTTTAAAGGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGTTTAAAATATCATCTTaGCGGGACTCAAGAGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKEFKISS*RDSRAC Trigger: GCAAGCTCTTGAGTCCCGCCAAGATGATATTTTAAA...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR TCA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCTTCCCTCTTTTAACTaGAAAATCGCAATATCTACC | + |
|
Preference number: 4 (lower is better) Translates to: KKTLTLIQVPLLIIGMKELPSFN*KIAIST Trigger: GGTAGATATTGCGATTTTTCAGTTAAAAGAGGGAAG...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS GCA 90 bp | CTCTTGACCGAGGAGTGCGTGTGCACCGTGGACAGGACCCTGAAGTaGTCACAGAGCAGCCTGTGCAGCACAAGCAGGGAGAGGGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLTEECVCTVDRTLK*SQSSLCSTSRERGG Trigger: CCCTCCCCTCTCCCTGCTTGTGCTGCACAGGCTGCTCTGTGAGCACTTCAGGGTCCTGTCCACGGTGCACACGCACTCCTCGGTCAAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 90 bp | CACTTGAGAAGGTTTTCAGGCACGCTCTTGACCGAGGAGTGCGTGTaGACCGTGGACAGGACCCTGAAGTGCTCACAGAGCAGCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLRRFSGTLLTEECV*TVDRTLKCSQSSLC Trigger: GCACAGGCTGCTCTGTGAGCACTTCAGGGTCCTGTCCACGGTGCACACGCACTCCTCGGTCAAGAGCGTGCCTGAAAACCTTCTCAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 90 bp | ACTGCAGCCTCCGATCTGCTGGAGTACAGACCACAGCACCACGTCTaGTACGGTGAGTTCATTCCCAGCGAGCCAAGGGCTCTTCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAASDLLEYRPQHHV*YGEFIPSEPRALPK Trigger: CTTGGGAAGAGCCCTTGGCTCGCTGGGAATGAACTCACCGTAGCAGACGTGGTGCTGTGGTCTGTACTCCAGCAGATCGGAGGCTGCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS TCA 90 bp | CTCCGATCTGCTGGAGTACAGACCACAGCACCACGTCTGCTACGGTaGGTTCATTCCCAGCGAGCCAAGGGCTCTTCCCAAGAGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSAGVQTTAPRLLR*VHSQRAKGSSQEQS Trigger: ACTCTGCTCTTGGGAAGAGCCCTTGGCTCGCTGGGAATGAACTCACCGTAGCAGACGTGGTGCTGTGGTCTGTACTCCAGCAGATCGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 90 bp | CCAAAGCACTTGAGAAGGTTTTCAGGCACGCTCTTGACCGAGGAGTaGGTGTGCACCGTGGACAGGACCCTGAAGTGCTCACAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKHLRRFSGTLLTEE*VCTVDRTLKCSQSS Trigger: GCTGCTCTGTGAGCACTTCAGGGTCCTGTCCACGGTGCACACGCACTCCTCGGTCAAGAGCGTGCCTGAAAACCTTCTCAAGTGCTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 90 bp | CACAAGACCTCATCCACCTCTGCACATTGGCTGGCACTGTCACACTaGAGCCTCCGATCTGCTGGAGTACAGACCACAGCACCACGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKTSSTSAHWLALSH*SLRSAGVQTTAPRL Trigger: CAGACGTGGTGCTGTGGTCTGTACTCCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGATGAGGTCTTGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS CCA 90 bp | CTCTGCACATTGGCTGGCACTGTCACACTGCAGCCTCCGATCTGCTaGAGTACAGACCACAGCACCACGTCTGCTACGGTGAGTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LCTLAGTVTLQPPIC*STDHSTTSATVSSF Trigger: GAATGAACTCACCGTAGCAGACGTGGTGCTGTGGTCTGTACTCCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 90 bp | GCCGTGTTAAAAGGAGCCAGGTTTTCACAAGACCTCATCCACCTCTaGACATTGGCTGGCACTGTCACACTGCAGCCTCCGATCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AVLKGARFSQDLIHL*TLAGTVTLQPPICW Trigger: CCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGATGAGGTCTTGTGAAAACCTGGCTCCTTTTAACACGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS CCA 90 bp | AGGAGCCAGGTTTTCACAAGACCTCATCCACCTCTGCACATTGGCTaGCACTGTCACACTGCAGCCTCCGATCTGCTGGAGTACAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQVFTRPHPPLHIG*HCHTAASDLLEYRP Trigger: TGGTCTGTACTCCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGATGAGGTCTTGTGAAAACCTGGCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS-3UTR CAA 90 bp | CTGGCTCTGACCACAGATCTTCACATGTGCTGTTCCCTCCATCTGCATCACTCTGCGGGACTCAAGAGCTaGCAGAGACAGGTTAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: LALTTDLHMCCSLHLHHSAGLKS*QRQVRL Trigger: GAGTCTAACCTGTCTCTGCAAGCTCTTGAGTCCCGC...AGAGTGATGCAGATGGAGGGAACAGCACATGTGAAGATCTGTGGTCAGAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
||
| CDS GCA 90 bp | GTTGACAGCATTATGCTTCTGGCCAAACAGAGAGAACAAGAAACGTaGAATGTTCCCTTCGCCTTCGATGGGGCACATCGTCTGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: VDSIMLLAKQREQET*NVPFAFDGAHRLDA Trigger: AGCATCCAGACGATGTGCCCCATCGAAGGCGAAGGGAACATTGCACGTTTCTTGTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS-3UTR CAA 90 bp | TCACTTGAGGTCAGGAGTTCGAGAGGACAACATGATGAAACTCCATTTCTACTGTGTAATCTCAGCACTTaGGAAGGGCGAGGCGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLEVRSSRGQHDETPFLLCNLST*EGRGGW Trigger: CCACCCGCCTCGCCCTTCCAAAGTGCTGAGATTACA...CAGTAGAAATGGAGTTTCATCATGTTGTCCTCTCGAACTCCTGACCTCAAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415999.1 |
||
| CDS CCA 90 bp | AAGAAACGTGCAATGTTCCCTTCGCCTTCGATGGGGCACATCGTCTaGATGCTGAATTTCATCTGCGTCTTCGGCACATTCTTCCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: KKRAMFPSPSMGHIV*MLNFICVFGTFFQI Trigger: AATTTGGAAGAATGTGCCGAAGACGCAGATGAAATTCAGCATCCAGACGATGTGCCCCATCGAAGGCGAAGGGAACATTGCACGTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS-3UTR CAA 90 bp | TCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTCAAGTCCAGCGCATaGGTGGTTAAAGTCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SDSNTSPLTDNRHERAPFFKSSA*VVKVVG Trigger: GCCCACGACTTTAACCACCAATGCGCTGGACTTGAA...GAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCGAGGCCGGGTTTGCGTaGATCACGATGTCTTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLTDNRHERAPFLKSKPEAGFA*ITMSFS Trigger: GCTGAAAGACATCGTGATCAACGCAAACCCGGCCTC...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CAA 90 bp | AGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCTTTAAAATCAGTTACGGCGCGGGACTCAAGAGCTaGCAGAGACAGGTTAGACTC | + |
|
Preference number: 5 (lower is better) Translates to: RHERAPFLKSKPFKISYGAGLKS*QRQVRL Trigger: GAGTCTAACCTGTCTCTGCAAGCTCTTGAGTCCCGC...GCCGTAACTGATTTTAAAGGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CAA 90 bp | AATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTTTTTCAGGCACGCTCTaGACCGAGGAGTGCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTSPLTDNRHERAPFLKSFSGTL*TEECVC Trigger: GCACACGCACTCCTCGGTCAAGAGCGTGCCTGAAAA...AGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CAA 90 bp | GACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATGTTCTCCAAAGCACTaGAGAAGGTTTTCAGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: DSDSNTSPLTDNRHERAPCSPKH*RRFSGT Trigger: CGTGCCTGAAAACCTTCTCAAGTGCTTTGGAGAACA...TGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCTCCGCTTGGATTATGTaGGTTACATCCAAGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPLTDNRHERAPFLKSKPSAWIM*VTSKSA Trigger: TGCAGACTTGGATGTAACCAACATAATCCAAGCGGA...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGTCTATAAGGGTTGCGTaGACAGCATTATGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKTLTLIQVPLLIIGMKESIRVA*TALCFW Trigger: CCAGAAGCATAATGCTGTCAACGCAACCCTTATAGA...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGACTCTGACTCTAATACAAGTCCCCTTACTGATAATAGGCATGAAAGAGATTCACTTAAGGAGCTaGAGGGCCGTGTTAAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKTLTLIQVPLLIIGMKEIHLRS*RAVLKG Trigger: TCCTTTTAACACGGCCCTCAAGCTCCTTAAGTGAAT...CTCTTTCATGCCTATTATCAGTAAGGGGACTTGTATTAGAGTCAGAGTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS-3UTR CAA 90 bp | AGTCCCCTTACTGATAATAGGCATGAAAGAGCACCATTCTTAAAATCTAAACCCTACATGATGCTTTTATaGACACTTGACAACTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPLTDNRHERAPFLKSKPYMMLL*TLDNWP Trigger: AGGCCAGTTGTCAAGTGTCAATAAAAGCATCATGTA...GGGTTTAGATTTTAAGAATGGTGCTCTTTCATGCCTATTATCAGTAAGGGGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000223029.8 |
||
| CDS GCA 72 bp | GAGGAGTGCGTGTGCACCGTGGACAGGACCCTGAAGTaGTCACAGAGCAGCCTGTGCAGCACAAGCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EECVCTVDRTLK*SQSSLCSTSRE Trigger: CTCCCTGCTTGTGCTGCACAGGCTGCTCTGTGAGCACTTCAGGGTCCTGTCCACGGTGCACACGCACTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 72 bp | AGGTTTTCAGGCACGCTCTTGACCGAGGAGTGCGTGTaGACCGTGGACAGGACCCTGAAGTGCTCACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RFSGTLLTEECV*TVDRTLKCSQS Trigger: GCTCTGTGAGCACTTCAGGGTCCTGTCCACGGTGCACACGCACTCCTCGGTCAAGAGCGTGCCTGAAAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS TCA 72 bp | GCTGGAGTACAGACCACAGCACCACGTCTGCTACGGTaGGTTCATTCCCAGCGAGCCAAGGGCTCTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGVQTTAPRLLR*VHSQRAKGSSQ Trigger: TTGGGAAGAGCCCTTGGCTCGCTGGGAATGAACTCACCGTAGCAGACGTGGTGCTGTGGTCTGTACTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 72 bp | TCCGATCTGCTGGAGTACAGACCACAGCACCACGTCTaGTACGGTGAGTTCATTCCCAGCGAGCCAAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SDLLEYRPQHHV*YGEFIPSEPRA Trigger: AGCCCTTGGCTCGCTGGGAATGAACTCACCGTAGCAGACGTGGTGCTGTGGTCTGTACTCCAGCAGATCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 72 bp | TTGAGAAGGTTTTCAGGCACGCTCTTGACCGAGGAGTaGGTGTGCACCGTGGACAGGACCCTGAAGTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LRRFSGTLLTEE*VCTVDRTLKCS Trigger: TGAGCACTTCAGGGTCCTGTCCACGGTGCACACGCACTCCTCGGTCAAGAGCGTGCCTGAAAACCTTCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 72 bp | TCATCCACCTCTGCACATTGGCTGGCACTGTCACACTaGAGCCTCCGATCTGCTGGAGTACAGACCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSTSAHWLALSH*SLRSAGVQTTA Trigger: TGCTGTGGTCTGTACTCCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGATGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS CAA 72 bp | TCTCCAAAGCACTTGAGAAGGTTTTCAGGCACGCTCTaGACCGAGGAGTGCGTGTGCACCGTGGACAGGACC | + |
|
Preference number: 6 (lower is better) Translates to: SPKHLRRFSGTL*TEECVCTVDRT Trigger: GGTCCTGTCCACGGTGCACACGCACTCCTCGGTCAAGAGCGTGCCTGAAAACCTTCTCAAGTGCTTTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 72 bp | AAAGGAGCCAGGTTTTCACAAGACCTCATCCACCTCTaGACATTGGCTGGCACTGTCACACTGCAGCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: KGARFSQDLIHL*TLAGTVTLQPP Trigger: CGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGATGAGGTCTTGTGAAAACCTGGCTCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS CCA 72 bp | GTTTTCACAAGACCTCATCCACCTCTGCACATTGGCTaGCACTGTCACACTGCAGCCTCCGATCTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VFTRPHPPLHIG*HCHTAASDLLE Trigger: CTCCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGATGAGGTCTTGTGAAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS CCA 72 bp | GCAATGTTCCCTTCGCCTTCGATGGGGCACATCGTCTaGATGCTGAATTTCATCTGCGTCTTCGGCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: AMFPSPSMGHIV*MLNFICVFGTF Trigger: GAATGTGCCGAAGACGCAGATGAAATTCAGCATCCAGACGATGTGCCCCATCGAAGGCGAAGGGAACATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS CCA 72 bp | CAGCGAGCCAAGGGCTCTTCCCAAGAGCAGAGTTCATaGAGCGGAAAACAGCGGCTTTTTCTTTACTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QRAKGSSQEQSS*SGKQRLFLYCF Trigger: GAAGCAGTAAAGAAAAAGCCGCTGTTTTCCGCTCCATGAACTCTGCTCTTGGGAAGAGCCCTTGGCTCGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS CAA 90 bp | TTAAAAGGAGCCAGGTTTTCACAAGACCTCATCCACCTCTGCACATaGGCTGGCACTGTCACACTGCAGCCTCCGATCTGCTGGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: LKGARFSQDLIHLCT*AGTVTLQPPICWST Trigger: TGTACTCCAGCAGATCGGAGGCTGCAGTGTGACAGTGCCAGCCAATGTGCAGAGGTGGATGAGGTCTTGTGAAAACCTGGCTCCTTTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS TCA 72 bp | TCCCTTCGCCTTCGATGGGGCACATCGTCTGGATGCTaGATTTCATCTGCGTCTTCGGCACATTCTTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLRLRWGTSSGC*ISSASSAHSSK Trigger: TTTGGAAGAATGTGCCGAAGACGCAGATGAAATTCAGCATCCAGACGATGTGCCCCATCGAAGGCGAAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS GCA 72 bp | ATTATGCTTCTGGCCAAACAGAGAGAACAAGAAACGTaGAATGTTCCCTTCGCCTTCGATGGGGCACATCGT | + |
|
Preference number: 6 (lower is better) Translates to: IMLLAKQREQET*NVPFAFDGAHR Trigger: ACGATGTGCCCCATCGAAGGCGAAGGGAACATTGCACGTTTCTTGTTCTCTCTGTTTGGCCAGAAGCATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
||
| CDS CCA 72 bp | AATCCTTCCCAAGCACTGAATTCAAGTCCAGCGCATTaGTGGTTAAAGTCGTGGGCTCATCCGCTTGGATTA | + |
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Preference number: 6 (lower is better) Translates to: NPSQALNSSPAH*WLKSWAHPLGL Trigger: TAATCCAAGCGGATGAGCCCACGACTTTAACCACCAATGCGCTGGACTTGAATTCAGTGCTTGGGAAGGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000223029.8 ENST00000400479.6 |
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| CDS CAA 72 bp | ATCGCAATATCTACCCAGCTATCTATAAGGGTTGCGTaGACAGCATTATGCTTCTGGCCAAACAGAGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: IAISTQLSIRVA*TALCFWPNREN Trigger: GTTCTCTCTGTTTGGCCAGAAGCATAATGCTGTCAACGCAACCCTTATAGATAGCTGGGTAGATATTGCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
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| CDS GCA 72 bp | AAAAATCGCAATATCTACCCAGCTATCTATAAGGGTTaGGTTGACAGCATTATGCTTCTGGCCAAACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: KNRNIYPAIYKG*VDSIMLLAKQR Trigger: TCTCTGTTTGGCCAGAAGCATAATGCTGTCAACGCAACCCTTATAGATAGCTGGGTAGATATTGCGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000223029.8 ENST00000395236.2 ENST00000400479.6 |
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