RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AIG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000146416

Ensembl transcript IDs: ENST00000275235.8, ENST00000357847.9, ENST00000367596.5, ENST00000367601.8, ENST00000447498.5, ENST00000458219.1, ENST00000470265.1, ENST00000494282.6, ENST00000629020.2, ENST00000646199.1

Found 492 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAAAGCCAGTGCTGAGCACTGAGGTCAGTGGGAGAGCAAGGGCATaGGGAGCCTCAAGCATCAAAAGCTCACTGGGCCTGGGCCTTGTC +
Preference number: 1 (lower is better)
Translates to: RKPVLSTEVSGRARA*GASSIKSSLGLGLV
Trigger: GACAAGGCCCAGGCCCAGTGAGCTTTTGATGCTTGAGGCTCCTCATGCCCTTGCTCTCCCACTGACCTCAGTGCTCAGCACTGGCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 90 bp ACCTCTCTTCCCCACCCTTTCCACAGAATCAGGACACAGCATCTCTaGGACACACCCAGCTCCTATGGCCTCTGGGAGACAAGGCTTCAA +
Preference number: 1 (lower is better)
Translates to: TSLPHPFHRIRTQHL*DTPSSYGLWETRLQ
Trigger: TTGAAGCCTTGTCTCCCAGAGGCCATAGGAGCTGGGTGTGTCCCAGAGATGCTGTGTCCTGATTCTGTGGAAAGGGTGGGGAAGAGAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR GCA 90 bp TTGTGCAGAGCAGCATGCATGGCACCAGGTCAATCCTTTAGTCATTaGTGGAGCAAGCTTTCTGTGGAGAGGCAGCCTGCTTCAAAGTCA +
Preference number: 1 (lower is better)
Translates to: LCRAACMAPGQSFSH*WSKLSVERQPASKS
Trigger: TGACTTTGAAGCAGGCTGCCTCTCCACAGAAAGCTTGCTCCAGCAATGACTAAAGGATTGACCTGGTGCCATGCATGCTGCTCTGCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 90 bp GTGGGAGAGCAAGGGCATGAGGAGCCTCAAGCATCAAAAGCTCACTaGGCCTGGGCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAA +
Preference number: 1 (lower is better)
Translates to: VGEQGHEEPQASKAH*AWALSFYSVSRLLQ
Trigger: TTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGCCCAGGCCCAGTGAGCTTTTGATGCTTGAGGCTCCTCATGCCCTTGCTCTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 90 bp GAGCAAGGGCATGAGGAGCCTCAAGCATCAAAAGCTCACTGGGCCTaGGCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTG +
Preference number: 1 (lower is better)
Translates to: EQGHEEPQASKAHWA*ALSFYSVSRLLQSV
Trigger: CACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGCCCAGGCCCAGTGAGCTTTTGATGCTTGAGGCTCCTCATGCCCTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR GCA 90 bp GAGAGCTGGCATAAGAGAATAGATGACTTGTACCCTGAAATCTTCTaGTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTT +
Preference number: 1 (lower is better)
Translates to: ESWHKRIDDLYPEIF*CPTLTAPNLDCLSL
Trigger: AAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATTTCAGGGTACAAGTCATCTATTCTCTTATGCCAGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR GCA 90 bp TCGCTTCAAGGTCATTTCCAAATGTCCTTCTTGTGCAGAGCAGCATaGATGGCACCAGGTCAATCCTTTAGTCATTGCTGGAGCAAGCTT +
Preference number: 1 (lower is better)
Translates to: SLQGHFQMSFLCRAA*MAPGQSFSHCWSKL
Trigger: AAGCTTGCTCCAGCAATGACTAAAGGATTGACCTGGTGCCATGCATGCTGCTCTGCACAAGAAGGACATTTGGAAATGACCTTGAAGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 90 bp TGCTGCGGATACCCTTCTGTACATCGCTTGAGAAATGGCACTTCTTaGAGGCCCGTATTTCATCAACTTGGCAAAACTTCGCTTCAAGGT +
Preference number: 1 (lower is better)
Translates to: CCGYPSVHRLRNGTS*RPVFHQLGKTSLQG
Trigger: ACCTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAGGGTATCCGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR GCA 90 bp CTTGGCAAAACTTCGCTTCAAGGTCATTTCCAAATGTCCTTCTTGTaGAGAGCAGCATGCATGGCACCAGGTCAATCCTTTAGTCATTGC +
Preference number: 1 (lower is better)
Translates to: LGKTSLQGHFQMSFL*RAACMAPGQSFSHC
Trigger: GCAATGACTAAAGGATTGACCTGGTGCCATGCATGCTGCTCTGCACAAGAAGGACATTTGGAAATGACCTTGAAGCGAAGTTTTGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 90 bp CTGGAGCAAGCTTTCTGTGGAGAGGCAGCCTGCTTCAAAGTCAGATaGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTGAAATG +
Preference number: 1 (lower is better)
Translates to: LEQAFCGEAACFKVR*AFEKRAKKTLSFEM
Trigger: CATTTCAAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCAGGCTGCCTCTCCACAGAAAGCTTGCTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR TCA 90 bp GGGGTAATTTTTGACAATGCTGCGGATACCCTTCTGTACATCGCTTaGGAAATGGCACTTCTTGAAGGCCCGTATTTCATCAACTTGGCA +
Preference number: 1 (lower is better)
Translates to: GVIFDNAADTLLYIA*EMALLEGPYFINLA
Trigger: TGCCAAGTTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAGGGTATCCGCAGCATTGTCAAAAATTACCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 90 bp GACTTCCAAATAAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTaGAATGTCAGCCAACTTCACCAGCATGAGAAGTGCAATCAGGCG +
Preference number: 1 (lower is better)
Translates to: DFQIRLKHSFMLSRA*NVSQLHQHEKCNQA
Trigger: CGCCTGATTGCACTTCTCATGCTGGTGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTTATTTGGAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 90 bp AAAGAAGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTaGACCTCAGCTCTGTCCATATTCCCTCTCCTGTGGAGAAGCTAT +
Preference number: 1 (lower is better)
Translates to: KEENSTDSAQTAHVS*TSALSIFPLLWRSY
Trigger: ATAGCTTCTCCACAGGAGAGGGAATATGGACAGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR GCA 90 bp CATCATTATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATaGAATGAGAAACATCTGTCCCCTTCCCTCTCAGGTCCCCATGGT +
Preference number: 1 (lower is better)
Translates to: HHYYKWCSFEATVTL*NEKHLSPSLSGPHG
Trigger: ACCATGGGGACCTGAGAGGGAAGGGGACAGATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATAATGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR TCA 90 bp CTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCACCAGCATaGGAAGTGCAATCAGGCGACATTATGCAGCAACATAAATACATC +
Preference number: 1 (lower is better)
Translates to: LHVIQSLKCQPTSPA*EVQSGDIMQQHKYI
Trigger: GATGTATTTATGTTGCTGCATAATGTCGCCTGATTGCACTTCTCATGCTGGTGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 90 bp TCGCTTGAGAAATGGCACTTCTTGAAGGCCCGTATTTCATCAACTTaGCAAAACTTCGCTTCAAGGTCATTTCCAAATGTCCTTCTTGTG +
Preference number: 1 (lower is better)
Translates to: SLEKWHFLKARISST*QNFASRSFPNVLLV
Trigger: CACAAGAAGGACATTTGGAAATGACCTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 90 bp TTTTTGACAATGCTGCGGATACCCTTCTGTACATCGCTTGAGAAATaGCACTTCTTGAAGGCCCGTATTTCATCAACTTGGCAAAACTTC +
Preference number: 1 (lower is better)
Translates to: FLTMLRIPFCTSLEK*HFLKARISSTWQNF
Trigger: GAAGTTTTGCCAAGTTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAGGGTATCCGCAGCATTGTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 90 bp CTCTCTCTATTCAACCCAATCCTGGTAGAATCATGTTTTTCTTCCTaGAGGACTTGTATGTACTGGACCAGTAAGAACCTTTGCCTGTTG +
Preference number: 1 (lower is better)
Translates to: LSLFNPILVESCFSS*RTCMYWTSKNLCLL
Trigger: CAACAGGCAAAGGTTCTTACTGGTCCAGTACATACAAGTCCTTCAGGAAGAAAAACATGATTCTACCAGGATTGGGTTGAATAGAGAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR GCA 90 bp GTCAGCCAACTTCACCAGCATGAGAAGTGCAATCAGGCGACATTATaGAGCAACATAAATACATCGCTCAGTAAAATGGAAAACTGTATA +
Preference number: 1 (lower is better)
Translates to: VSQLHQHEKCNQATL*SNINTSLSKMENCI
Trigger: TATACAGTTTTCCATTTTACTGAGCGATGTATTTATGTTGCTGCATAATGTCGCCTGATTGCACTTCTCATGCTGGTGAAGTTGGCTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 90 bp GTTTTATTTGAGCATCAGATTAAACCACAAGCAGTTTGTTTAATCTaGCTTGCTAACACTACTCACACATCCACTCATCTGCCCTCACTT +
Preference number: 1 (lower is better)
Translates to: VLFEHQIKPQAVCLI*LANTTHTSTHLPSL
Trigger: AAGTGAGGGCAGATGAGTGGATGTGTGAGTAGTGTTAGCAAGCCAGATTAAACAAACTGCTTGTGGTTTAATCTGATGCTCAAATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR TCA 90 bp TGGAAATCCCAGCTAGACTGCTTTTTAAACCAGCTTCTGGCAACATaGGGTGTGCAACTCATGAGTTTCAAACAGACTTCATTTATTTTT +
Preference number: 1 (lower is better)
Translates to: WKSQLDCFLNQLLAT*GVQLMSFKQTSFIF
Trigger: AAAAATAAATGAAGTCTGTTTGAAACTCATGAGTTGCACACCTCATGTTGCCAGAAGCTGGTTTAAAAAGCAGTCTAGCTGGGATTTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR CCA 90 bp CGACTCCTACAATCTGTGATCCATGATATTAAATATCAGAAGTCATaGTGTTCCTTATGGTTGATGTTCTTTGTTGTACTTTCCTTTCTT +
Preference number: 1 (lower is better)
Translates to: RLLQSVIHDIKYQKS*CSLWLMFFVVLSFL
Trigger: AAGAAAGGAAAGTACAACAAAGAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCACAGATTGTAGGAGTCG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp AGGCCATTCAGGATCAGGTCCGATGCTTTTGTTGAAGATTCTTCCCGTGTCACCGAGTGGTTCAGAAGGTaGCGCTGCGGGGGCAGCCAG +
Preference number: 2 (lower is better)
Translates to: RPFRIRSDAFVEDSSRVTEWFRR*RCGGSQ
Trigger: CTGGCTGCCCCCGCAGCGGCACCTTCTGAACCACTC...GGTGACACGGGAAGAATCTTCAACAAAAGCATCGGACCTGATCCTGAATGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367596.5
3UTR-3UTR TCA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCCCAACTTCACCAGCATaGGAAGTGCAATCAGGCGAC +
Preference number: 2 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLAPTSPA*EVQSGD
Trigger: GTCGCCTGATTGCACTTCTCATGCTGGTGAAGTTGG...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp GTCCCAGCTACTCGGGAGGCTGAGAAGGCAGGAGAATGGCATGAACCCGGGAAGTGTGACATTATGCAATaGGAAACATCTGTCCCCTTC +
Preference number: 2 (lower is better)
Translates to: VPATREAEKAGEWHEPGKCDIMQ*ETSVPF
Trigger: GAAGGGGACAGATGTTTCTCATTGCATAATGTCACA...CTTCCCGGGTTCATGCCATTCTCCTGCCTTCTCAGCCTCCCGAGTAGCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357847.9
3UTR-3UTR TCA 90 bp GTCCCAGCTACTCGGGAGGCTGAGAAGGCAGGAGAATGGCATGAACCCGGGAAGATGCTGTTAGGATTTTaGGATGCACAATGCAGACGT +
Preference number: 2 (lower is better)
Translates to: VPATREAEKAGEWHEPGKMLLGF*DAQCRR
Trigger: ACGTCTGCATTGTGCATCTCAAAATCCTAACAGCAT...CTTCCCGGGTTCATGCCATTCTCCTGCCTTCTCAGCCTCCCGAGTAGCTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357847.9
3UTR-3UTR CCA 90 bp AATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCGGAGCAAGCTTTCTGTaGAGAGGCAGCCTGCTTCAA +
Preference number: 2 (lower is better)
Translates to: NLLLSHLDCPKLGLSQPCGASFL*RGSLLQ
Trigger: TTGAAGCAGGCTGCCTCTCCACAGAAAGCTTGCTCC...GCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTGCGTTCTCCTGCAGATaGGTTGACTTGGCAGCAGTG +
Preference number: 2 (lower is better)
Translates to: PLRSPWWPRFMITATFRIAFSCR*VDLAAV
Trigger: CACTGCTGCCAAGTCAACCCATCTGCAGGAGAACGC...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR CAA 90 bp TTGTACCCTGAAATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTaGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAG +
Preference number: 2 (lower is better)
Translates to: LYPEIFCCPTLTAPN*DCLSLARVIVGRSQ
Trigger: CTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATTTCAGGGTACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGGCATATGTCTTCAATTaGGCAGAGTGTCGAGTGCCA +
Preference number: 2 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKAYVFN*AECRVP
Trigger: TGGCACTCGACACTCTGCTCAATTGAAGACATATGC...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR-3UTR GCA 90 bp AGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGAACCTCAGCTCTCTCCCCCACTGCCAATaGCCGAGGGGAAGGAGTCTT +
Preference number: 2 (lower is better)
Translates to: RKQHRFSSNSTCVLNLSSLPHCQ*PRGRSL
Trigger: AAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGGAG...AGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CCA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGACATCGCTTGAGAAATaGCACTTCTTGAAGGCCCGT +
Preference number: 2 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRTSLEK*HFLKAR
Trigger: ACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGT...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCCTGGCACCCAGCTCTTaGACTTCCCAGGCTCTAGAA +
Preference number: 2 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTLAPSS*TSQALE
Trigger: TTCTAGAGCCTGGGAAGTCCAAGAGCTGGGTGCCAG...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCTTAAGGGGTAATTTTTaGCAATGCTGCGGATACCCT +
Preference number: 2 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLALRGNF*QCCGYP
Trigger: AGGGTATCCGCAGCATTGTCAAAAATTACCCCTTAA...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTATCACTGTACCCTTTaGGCATCAACCTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRYHCTL*ASTSPS
Trigger: TGAAGGAGAGGTTGATGCTCAAAGGGTACAGTGATA...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGTATCACTGTACCCTTTaGGCATCAACCTCTCCTTCA +
Preference number: 2 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKYHCTL*ASTSPS
Trigger: TGAAGGAGAGGTTGATGCTCAAAGGGTACAGTGATA...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCGTTCCTTCCACCATGTaGGGACACAGCAAGAAGCTG +
Preference number: 2 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTVPSTM*GHSKKL
Trigger: CAGCTTCTTGCTGTGTCCTCACATGGTGGAAGGAAC...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATCAGAACCCAACCATaGTGGCACCCAGCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTIRTQP*WHPALG
Trigger: TCCAAGAGCTGGGTGCCAGCATGGTTGGGTTCTGAT...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CAA 90 bp GGAGGAGGAACAGGTTTGAAGGCAAGAAGGTACAACACGCCTTCGTaGTTGGGTAACCACGGAAAGAAGAAAACAGCACAGATTCAGCTC +
Preference number: 2 (lower is better)
Translates to: GGGTGLKARRYNTPS*LGNHGKKKTAQIQL
Trigger: GAGCTGAATCTGTGCTGTTTTCTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTTGTACCTTCTTGCCTTCAAACCTGTTCCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR TCA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGAGAAATGGCACTTCTTaGAGGCCCGTATTTCATCAA +
Preference number: 2 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRRNGTS*RPVFHQ
Trigger: TTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCT...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGCTTCTGTACATCGCTTaGGAAATGGCACTTCTTGAA +
Preference number: 2 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRLLYIA*EMALLE
Trigger: TTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAG...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTTCTGCTGTCCCACCTTaGCTGCCCCAAACTTGGACT +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSSAVPP*LPQTWT
Trigger: AGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGA...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCGCAGAGCAGCATGCATaGCACCAGGTCAATCCTTTA +
Preference number: 2 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTAEQHA*HQVNPL
Trigger: TAAAGGATTGACCTGGTGCCATGCATGCTGCTCTGC...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CAA 90 bp AAGAGAATAGATGACTTGTACCCTGAAATCTTCTGCTGTCCCACCTaGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATA +
Preference number: 2 (lower is better)
Translates to: KRIDDLYPEIFCCPT*TAPNLDCLSLARVI
Trigger: TATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATTTCAGGGTACAAGTCATCTATTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp CCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCGGCAGGAGAATGGCATaGACCCGGGAAGCGGAGCTT +
Preference number: 2 (lower is better)
Translates to: PRFMITATFRIKYTKALLGRRMA*TREAEL
Trigger: AAGCTCCGCTTCCCGGGTTCATGCCATTCTCCTGCC...GAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357847.9
3UTR-3UTR GCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCATGTGGAGAGGCAGCCTaGTTCAAAGTCAGATGGGCG +
Preference number: 2 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSCGEAA*FKVRWA
Trigger: CGCCCATCTGACTTTGAAGCAGGCTGCCTCTCCACA...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTTTGTGCAGAGCAGCATaGATGGCACCAGGTCAATCC +
Preference number: 2 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLLCRAA*MAPGQS
Trigger: GGATTGACCTGGTGCCATGCATGCTGCTCTGCACAA...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp ACAGAGAAGACCTCAGAAGCCTGGACTAGTGGAAAGCAGAACAAAATATGGGACCTCAGGTCCCCATGGTaGCCTAGGTTCATGATTACA +
Preference number: 2 (lower is better)
Translates to: TEKTSEAWTSGKQNKIWDLRSPW*PRFMIT
Trigger: TGTAATCATGAACCTAGGCCACCATGGGGACCTGAG...GTCCCATATTTTGTTCTGCTTTCCACTAGTCCAGGCTTCTGAGGTCTTCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGCGTATTTCATCAACTTaGCAAAACTTCGCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKRISST*QNFASR
Trigger: CCTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACG...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAACATCGCTTGAGAAATaGCACTTCTTGAAGGCCCGT +
Preference number: 2 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARTSLEK*HFLKAR
Trigger: ACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGT...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CAA 90 bp ATGCTGCGGATACCCTTCTGTACATCGCTTGAGAAATGGCACTTCTaGAAGGCCCGTATTTCATCAACTTGGCAAAACTTCGCTTCAAGG +
Preference number: 2 (lower is better)
Translates to: MLRIPFCTSLEKWHF*KARISSTWQNFASR
Trigger: CCTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAGGGTATCCGCAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CAA 90 bp GGAGGAACAGGTTTGAAGGCAAGAAGGTACAACACGCCTTCGTTGTaGGGTAACCACGGAAAGAAGAAAACAGCACAGATTCAGCTCAAA +
Preference number: 2 (lower is better)
Translates to: GGTGLKARRYNTPSL*GNHGKKKTAQIQLK
Trigger: TTTGAGCTGAATCTGTGCTGTTTTCTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTTGTACCTTCTTGCCTTCAAACCTGTTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR TCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTTATGAGTGTGCCTACTaGGGAAAGAAACGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLYECAY*GKKRPS
Trigger: AGAGGGGCGTTTCTTTCCTCAGTAGGCACACTCATA...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGATTACTATATAAAATGTaGGCAGGGGCTGGGTGTGGT +
Preference number: 2 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARLLYKM*AGAGCG
Trigger: ACCACACCCAGCCCCTGCTCACATTTTATATAGTAA...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp CTCTCCCTTATGAGAAGGATTTGGTTCTTTCAGGTGAAGTTCCAAATCACTAGACATTTGTCCCCCAGTTaGCAGGTAAGGGTACCCAGC +
Preference number: 2 (lower is better)
Translates to: LSLMRRIWFFQVKFQITRHLSPS*QVRVPS
Trigger: GCTGGGTACCCTTACCTGGCAACTGGGGGACAAATG...TCTAGTGATTTGGAACTTCACCTGAAAGAACCAAATCCTTCTCATAAGGGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367596.5
3UTR-3UTR GCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTTTGTGCAGAGCAGCATaGATGGCACCAGGTCAATCC +
Preference number: 2 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFLCRAA*MAPGQS
Trigger: GGATTGACCTGGTGCCATGCATGCTGCTCTGCACAA...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTAAGGAGACCTTCCAGTaGCACTCTAACCCTGACTTC +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSKETFQ*HSNPDF
Trigger: GAAGTCAGGGTTAGAGTGGCACTGGAAGGTCTCCTT...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCCTGTCCCACCTTGACTaGCCCAAACTTGGACTGTCT +
Preference number: 2 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFLSHLD*PKLGLS
Trigger: AGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAG...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CAA 90 bp CAACTTGGCAAAACTTCGCTTCAAGGTCATTTCCAAATGTCCTTCTaGTGCAGAGCAGCATGCATGGCACCAGGTCAATCCTTTAGTCAT +
Preference number: 2 (lower is better)
Translates to: QLGKTSLQGHFQMSF*CRAACMAPGQSFSH
Trigger: ATGACTAAAGGATTGACCTGGTGCCATGCATGCTGCTCTGCACAAGAAGGACATTTGGAAATGACCTTGAAGCGAAGTTTTGCCAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CAA 90 bp GAAAGAAGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTaGAACCTCAGCTCTGTCCATATTCCCTCTCCTGTGGAGAAGCTA +
Preference number: 2 (lower is better)
Translates to: ERRKQHRFSSNSTCV*NLSSVHIPSPVEKL
Trigger: TAGCTTCTCCACAGGAGAGGGAATATGGACAGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCTTCTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR TCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCGGTGGCCTAGGTTCATaGTTACAGCCACCTTTAGGA +
Preference number: 2 (lower is better)
Translates to: WWPRFMITATFRIKYTKAGGLGS*LQPPLG
Trigger: TCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACC...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR-3UTR TCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTAGTCAGATGGGCGTTTaGAAAGCGTGCCAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSSQMGV*KACQEN
Trigger: GTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACT...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAAGAAATGGCACTTCTTaGAGGCCCGTATTTCATCAA +
Preference number: 2 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARRNGTS*RPVFHQ
Trigger: TTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCT...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp TATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATGCAATGAGAAACATCTCCCCCACTGCCAATaGCCGAGGGGAAGGAGTCTT +
Preference number: 2 (lower is better)
Translates to: YYKWCSFEATVTLCNEKHLPHCQ*PRGRSL
Trigger: AAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGGAG...ATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR-3UTR GCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTCACCAGCATGAGAAGTaGAATCAGGCGACATTATGC +
Preference number: 2 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLHQHEK*NQATLC
Trigger: GCATAATGTCGCCTGATTGCACTTCTCATGCTGGTG...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTCACCAGCATGAGAAGTaGAATCAGGCGACATTATGC +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSHQHEK*NQATLC
Trigger: GCATAATGTCGCCTGATTGCACTTCTCATGCTGGTG...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTCTGGGAAGTTGCTATTaGCAGTATGTTTCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSLGSCY*QYVSLV
Trigger: GACCAGGGAAACATACTGGCAATAGCAACTTCCCAG...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCAGAGCAGAGTGTCGAGTaGCAAACTTCAACCAAGCTG +
Preference number: 2 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSEQSVE*QTSTKL
Trigger: CAGCTTGGTTGAAGTTTGGCACTCGACACTCTGCTC...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR-3UTR GCA 90 bp AGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGAACCTCAGCTCTTTGACTTGGCAGCAGTaGTGGAATCTTCAAAAGCGC +
Preference number: 2 (lower is better)
Translates to: RKQHRFSSNSTCVLNLSSLTWQQ*WNLQKR
Trigger: GCGCTTTTGAAGATTCCAGCACTGCTGCCAAGTCAA...AGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTGGAGGCCGAGGCGTGTaGATCACAAGGTCAGGAGAT +
Preference number: 2 (lower is better)
Translates to: TATFRIKYTKALLYICPFGGRGV*ITRSGD
Trigger: ATCTCCTGACCTTGTGATCCACACGCCTCGGCCTCC...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357847.9
3UTR-3UTR CCA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGGAGCAAGCTTTCTGTaGAGAGGCAGCCTGCTTCAA +
Preference number: 2 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGGASFL*RGSLLQ
Trigger: TTGAAGCAGGCTGCCTCTCCACAGAAAGCTTGCTCC...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCAGCAGAGCAGCATGCATaGCACCAGGTCAATCCTTTA +
Preference number: 2 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSAEQHA*HQVNPL
Trigger: TAAAGGATTGACCTGGTGCCATGCATGCTGCTCTGC...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGCTGTATAGCAACAACTaGTGTCAACATCAATTAACA +
Preference number: 2 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKLYSNN*CQHQLT
Trigger: TGTTAATTGATGTTGACACCAGTTGTTGCTATACAG...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp GATCTTTTATGTTTGGTTTTCATGGCTAAGGAACTGGCAGAGATCTGGAGCACTACAGCACATGTGTCTTaGACCTCAGCTCTGTCCATA +
Preference number: 2 (lower is better)
Translates to: DLLCLVFMAKELAEIWSTTAHVS*TSALSI
Trigger: TATGGACAGAGCTGAGGTTCAAGACACATGTGCTGT...AGTGCTCCAGATCTCTGCCAGTTCCTTAGCCATGAAAACCAAACATAAAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR TCA 90 bp CCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCAGGAGTAAGGACATCTaGCGGGAGGAGGAACAGGTT +
Preference number: 2 (lower is better)
Translates to: PRFMITATFRIKYTKALLRSKDI*REEEQV
Trigger: AACCTGTTCCTCCTCCCGTCAGATGTCCTTACTCCT...GAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR GCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCCAAATGTCCTTCTTGTaGAGAGCAGCATGCATGGCA +
Preference number: 2 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFQMSFL*RAACMA
Trigger: TGCCATGCATGCTGCTCTGCACAAGAAGGACATTTG...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCATGCTTCAAAGTCAGATaGGCGTTTGAAAAGCGTGCC +
Preference number: 2 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSCFKVR*AFEKRA
Trigger: GGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCCTTGCTGAGTTTGCATaGAAATCCCAGCTAGACTGC +
Preference number: 2 (lower is better)
Translates to: WWPRFMITATFRIKYTKALAEFA*KSQLDC
Trigger: GCAGTCTAGCTGGGATTTCCATGCAAACTCAGCAAG...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR GCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTCAATCCTTTAGTCATTaGTGGAGCAAGCTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSQSFSH*WSKLSV
Trigger: CACAGAAAGCTTGCTCCAGCAATGACTAAAGGATTG...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCGAAACAAAAGTGGTATaGCAAAGTTCTCCATTACCT +
Preference number: 2 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTETKVV*QSSPLP
Trigger: AGGTAATGGAGAACTTTGGCATACCACTTTTGTTTC...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAGAAACAAAAGTGGTATaGCAAAGTTCTCCATTACCT +
Preference number: 2 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARETKVV*QSSPLP
Trigger: AGGTAATGGAGAACTTTGGCATACCACTTTTGTTTC...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGACTCCCTGCAGAAGGTTaGTTTTCATATTTTTATGCA +
Preference number: 2 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARLPAEG*FSYFYA
Trigger: TGCATAAAAATATGAAAAGCAACCTTCTGCAGGGAG...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR-3UTR GCA 90 bp GATCTGGAGCACTTTTTCCAAAGTCCTTCTCAGAAATCCTATGAAGGAAAACTTTCCAAAGCGTTCTCCTaGAGATGGGTTGACTTGGCA +
Preference number: 2 (lower is better)
Translates to: DLEHFFQSPSQKSYEGKLSKAFS*RWVDLA
Trigger: TGCCAAGTCAACCCATCTGCAGGAGAACGCTTTGGA...AAGTTTTCCTTCATAGGATTTCTGAGAAGGACTTTGGAAAAAGTGCTCCAGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCTACAAATCTGAGAGCTaGCATAAGAGAATAGATGAC +
Preference number: 2 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTYKSES*HKRIDD
Trigger: GTCATCTATTCTCTTATGCCAGCTCTCAGATTTGTA...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTAAAAGTAGCCAGGGGTaGTGGTCCACATCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDIKSSQG*WSTSVV
Trigger: GACCACAGATGTGGACCACCACCCCTGGCTACTTTT...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCCCAACTTCACCAGCATaGGAAGTGCAATCAGGCGAC +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFPTSPA*EVQSGD
Trigger: GTCGCCTGATTGCACTTCTCATGCTGGTGAAGTTGG...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTATGTTATCCAGAGCCTaGAATGTCAGCCAACTTCAC +
Preference number: 2 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFMLSRA*NVSQLH
Trigger: GTGAAGTTGGCTGACATTTCAGGCTCTGGATAACAT...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCGAGGTGTGCAACTCATaGGTTTCAAACAGACTTCAT +
Preference number: 2 (lower is better)
Translates to: WWPRFMITATFRIKYTKAEVCNS*VSNRLH
Trigger: ATGAAGTCTGTTTGAAACTCATGAGTTGCACACCTC...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR GCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTCAATCCTTTAGTCATTaGTGGAGCAAGCTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFQSFSH*WSKLSV
Trigger: CACAGAAAGCTTGCTCCAGCAATGACTAAAGGATTG...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTAATGTTCTGGGAAGTTaGTATTGCCAGTATGTTTCC +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSNVLGS*YCQYVS
Trigger: GGAAACATACTGGCAATAGCAACTTCCCAGAACATT...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp TATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATGCAATGAGAAACATCCTCTCAGGTCCCCATaGTGGCCTAGGTTCATGATT +
Preference number: 2 (lower is better)
Translates to: YYKWCSFEATVTLCNEKHPLRSP*WPRFMI
Trigger: AATCATGAACCTAGGCCACCATGGGGACCTGAGAGG...ATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR-3UTR CCA 90 bp AGCACTTTTTCCAAAGTCCTTCTCAGAAATCCTATGAAGGAAAACTTCAAATTGACTTGGCAGCAGTGCTaGAATCTTCAAAAGCGCGGG +
Preference number: 2 (lower is better)
Translates to: STFSKVLLRNPMKENFKLTWQQC*NLQKRG
Trigger: CCCGCGCTTTTGAAGATTCCAGCACTGCTGCCAAGT...CAATTTGAAGTTTTCCTTCATAGGATTTCTGAGAAGGACTTTGGAAAAAGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCAGGACTTGTATGTACTaGACCAGTAAGAACCTTTGC +
Preference number: 2 (lower is better)
Translates to: WWPRFMITATFRIKYTKARTCMY*TSKNLC
Trigger: GCAAAGGTTCTTACTGGTCCAGTACATACAAGTCCT...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTAGCTCCTATGGCCTCTaGGAGACAAGGCTTCAAGTT +
Preference number: 2 (lower is better)
Translates to: TATFRIKYTKALLYICPFSSYGL*ETRLQV
Trigger: AACTTGAAGCCTTGTCTCCCAGAGGCCATAGGAGCT...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR TCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTCTTCTGTACATCGCTTaGGAAATGGCACTTCTTGAA +
Preference number: 2 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFLLYIA*EMALLE
Trigger: TTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAG...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR-3UTR TCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATATGAGTGTGCCTACTaGGGAAAGAAACGCCCCTCT +
Preference number: 2 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSYECAY*GKKRPS
Trigger: AGAGGGGCGTTTCTTTCCTCAGTAGGCACACTCATA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTTTAGAATCTTTAAAATaGGAGTGGCCACAAGTCTTC +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSLESLK*EWPQVF
Trigger: GAAGACTTGTGGCCACTCTCATTTTAAAGATTCTAA...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCGTAGAGAATAGTCGATaGTGTTTCATGTTCCTGAAG +
Preference number: 2 (lower is better)
Translates to: WWPRFMITATFRIKYTKAVENSR*CFMFLK
Trigger: CTTCAGGAACATGAAACATCATCGACTATTCTCTAC...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR GCA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTATTGCCTTCTCTCCCTaGAGAAGGTTGCTTTTCATA +
Preference number: 2 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFIAFSP*RRLLFI
Trigger: TATGAAAAGCAACCTTCTGCAGGGAGAGAAGGCAAT...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR-3UTR GCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCACCAGTAAGAACCTTTaGCTGTTGTCTGTAGAGAAT +
Preference number: 2 (lower is better)
Translates to: WWPRFMITATFRIKYTKATSKNL*LLSVEN
Trigger: ATTCTCTACAGACAACAGGCAAAGGTTCTTACTGGT...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCGCATCAAAAGCTCACTaGGCCTGGGCCTTGTCTTTT +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFASKAH*AWALSF
Trigger: AAAAGACAAGGCCCAGGCCCAGTGAGCTTTTGATGC...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTATGTTTGGTTTTCATaGCTAAGGAACTGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: WWPRFMITATFRIKYTKAYVWFS*LRNWQR
Trigger: TCTCTGCCAGTTCCTTAGCCATGAAAACCAAACATA...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR TCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCAGTCAGATGGGCGTTTaGAAAGCGTGCCAAGAAAAC +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFSQMGV*KACQEN
Trigger: GTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACT...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAAAACTTCAACCAAGCTaGTCATACTGTAGTTCTGTG +
Preference number: 2 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGKLQPS*SYCSSV
Trigger: CACAGAACTACAGTATGATCAGCTTGGTTGAAGTTT...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR-3UTR GCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCCAAATGTCCTTCTTGTaGAGAGCAGCATGCATGGCA +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFQMSFL*RAACMA
Trigger: TGCCATGCATGCTGCTCTGCACAAGAAGGACATTTG...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTAACTTCATCCTCATTTaGGGCTTATCCTTCATTTTA +
Preference number: 2 (lower is better)
Translates to: VETLTSKVIALGDGPLGSNFILI*GLSFIL
Trigger: TAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTT...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTAATCAGGCGACATTATaGAGCAACATAAATACATCG +
Preference number: 2 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFNQATL*SNINTS
Trigger: CGATGTATTTATGTTGCTGCATAATGTCGCCTGATT...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTCTGTATAGCAACAACTaGTGTCAACATCAATTAACA +
Preference number: 2 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLLYSNN*CQHQLT
Trigger: TGTTAATTGATGTTGACACCAGTTGTTGCTATACAG...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTCAAATGGTGCTCATTTaGGGCAACTGTGACATTATG +
Preference number: 2 (lower is better)
Translates to: TATFRIKYTKALLYICPFQMVLI*GNCDIM
Trigger: CATAATGTCACAGTTGCCTCAAATGAGCACCATTTG...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR-3UTR TCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCAATGTTATCCAGAGCCTaGAATGTCAGCCAACTTCAC +
Preference number: 2 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSMLSRA*NVSQLH
Trigger: GTGAAGTTGGCTGACATTTCAGGCTCTGGATAACAT...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp CCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCGCAGTTTGTTTAATCTaGCTTGCTAACACTACTCAC +
Preference number: 2 (lower is better)
Translates to: PRFMITATFRIKYTKALLAVCLI*LANTTH
Trigger: GTGAGTAGTGTTAGCAAGCCAGATTAAACAAACTGC...GAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR TCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATTAAGGGGTAATTTTTaGCAATGCTGCGGATACCCT +
Preference number: 2 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSLRGNF*QCCGYP
Trigger: AGGGTATCCGCAGCATTGTCAAAAATTACCCCTTAA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp CCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCCATTATTACAAATGGTaGTCATTTGAGGCAACTGTG +
Preference number: 2 (lower is better)
Translates to: PRFMITATFRIKYTKALLHYYKW*SFEATV
Trigger: CACAGTTGCCTCAAATGAGCACCATTTGTAATAATG...GAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR-3UTR GCA 90 bp TCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTCTCAACTTCATCCTCATTTaGGGCTTATCCTTCATTTTA +
Preference number: 2 (lower is better)
Translates to: SINFILICGLSFILNSRLNFILI*GLSFIL
Trigger: TAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTT...GAGACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCTGGAAGTCTGTAATCTaGAAGAGGATCCTCATCAGA +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFWKSVI*KRILIR
Trigger: TCTGATGAGGATCCTCTTCCAGATTACAGACTTCCA...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCCTCAATGAATGGGATTaGTGGGCTTTTAAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFLNEWD*WAFKRG
Trigger: GCCTCTTTTAAAAGCCCACCAATCCCATTCATTGAG...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCGCCAGTATGTTTCCCTaGTCTTACAGATGTATGTTT +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFASMFP*SYRCMF
Trigger: AAACATACATCTGTAAGACCAGGGAAACATACTGGC...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR TCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATGCCAAATTTCTTATTaGAAAATCCCAGGCAGTGTA +
Preference number: 2 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSCQISY*KIPGSV
Trigger: TACACTGCCTGGGATTTTTCAATAAGAAATTTGGCA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR GCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCAATCAGGCGACATTATaGAGCAACATAAATACATCG +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFNQATL*SNINTS
Trigger: CGATGTATTTATGTTGCTGCATAATGTCGCCTGATT...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp ATACTGATTCAAAAACAAAAATTCCACGATGTAGGCCTAACAGAACTTGATAGGAGGATGATACTTACTTaGCACAAAACATCTGTCTTT +
Preference number: 2 (lower is better)
Translates to: ILIQKQKFHDVGLTELDRRMILT*HKTSVF
Trigger: AAAGACAGATGTTTTGTGCCAAGTAAGTATCATCCT...CCTATCAAGTTCTGTTAGGCCTACATCGTGGAATTTTTGTTTTTGAATCAGTAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000275235.8
3UTR-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCTCATGGTGTTCCTTATaGTTGATGTTCTTTGTTGTA +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFSWCSL*LMFFVV
Trigger: TACAACAAAGAACATCAACCATAAGGAACACCATGA...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCAAATATCAGAAGTCATaGTGTTCCTTATGGTTGATG +
Preference number: 2 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFKYQKS*CSLWLM
Trigger: CATCAACCATAAGGAACACCATGACTTCTGATATTT...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 72 bp GTGCTGAGCACTGAGGTCAGTGGGAGAGCAAGGGCATaGGGAGCCTCAAGCATCAAAAGCTCACTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: VLSTEVSGRARA*GASSIKSSLGL
Trigger: CAGGCCCAGTGAGCTTTTGATGCTTGAGGCTCCTCATGCCCTTGCTCTCCCACTGACCTCAGTGCTCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR GCA 72 bp AAGCGTTCTCCTGCAGATGGGTTGACTTGGCAGCAGTaGTGGAATCTTCAAAAGCGCGGGTGGAGAACGGGG +
Preference number: 3 (lower is better)
Translates to: KRSPADGLTWQQ*WNLQKRGWRTG
Trigger: CCCCGTTCTCCACCCGCGCTTTTGAAGATTCCAGCACTGCTGCCAAGTCAACCCATCTGCAGGAGAACGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR CCA 72 bp CCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATaGCGGCTCAATCTAGCTCTTGCGTTTAGACTTGGA +
Preference number: 3 (lower is better)
Translates to: PHCQCPRGRSLQ*RLNLALAFRLG
Trigger: TCCAAGTCTAAACGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR GCA 72 bp CACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTaGCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAA +
Preference number: 3 (lower is better)
Translates to: HLDCPKLGLSQP*QGYSRQVTGRE
Trigger: TTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp ACAAGTTCATCCCACGGTGGGTGCTCTGAAAAGCACCTTGAGGGCGAATGGGTCTCAGGTCCGATGCTTTaGTTGAAGATTCTTCCCGTG +
Preference number: 3 (lower is better)
Translates to: TSSSHGGCSEKHLEGEWVSGPML*LKILPV
Trigger: CACGGGAAGAATCTTCAACAAAAGCATCGGACCTGA...GACCCATTCGCCCTCAAGGTGCTTTTCAGAGCACCCACCGTGGGATGAACTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367596.5
3UTR-3UTR CAA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCTTATCACTGTACCCTTaGAGCATCAACCTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLALSLYP*SINLSF
Trigger: GAAGGAGAGGTTGATGCTCAAAGGGTACAGTGATAA...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 72 bp ATGACTTGTACCCTGAAATCTTCTGCTGTCCCACCTTaGCTGCCCCAAACTTGGACTGTCTCAGCCTTGCCA +
Preference number: 3 (lower is better)
Translates to: MTCTLKSSAVPP*LPQTWTVSALP
Trigger: TGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATTTCAGGGTACAAGTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 72 bp GAAACATCTGTCCCCTTCCCTCTCAGGTCCCCATGGTaGCCTAGGTTCATGATTACAGCCACCTTTAGGATT +
Preference number: 3 (lower is better)
Translates to: ETSVPFPLRSPW*PRFMITATFRI
Trigger: AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGGGAAGGGGACAGATGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR-3UTR CAA 90 bp TTGAAGGCAAGAAGGTACAACACGCCTTCGTTGTTGGGTAACCACGGAAAGAAGTGCAGATGGGTTGACTaGGCAGCAGTGCTGGAATCT +
Preference number: 3 (lower is better)
Translates to: LKARRYNTPSLLGNHGKKCRWVD*AAVLES
Trigger: AGATTCCAGCACTGCTGCCAAGTCAACCCATCTGCA...CTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTTGTACCTTCTTGCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR CCA 72 bp GTCAATCCTTTAGTCATTGCTGGAGCAAGCTTTCTGTaGAGAGGCAGCCTGCTTCAAAGTCAGATGGGCGTT +
Preference number: 3 (lower is better)
Translates to: VNPLVIAGASFL*RGSLLQSQMGV
Trigger: AACGCCCATCTGACTTTGAAGCAGGCTGCCTCTCCACAGAAAGCTTGCTCCAGCAATGACTAAAGGATTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 72 bp AACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTaGACCTCAGCTCTGTCCATATTCCCTCTCCTGTGG +
Preference number: 3 (lower is better)
Translates to: NSTDSAQTAHVS*TSALSIFPLLW
Trigger: CCACAGGAGAGGGAATATGGACAGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR CCA 72 bp GCTTTCTGTGGAGAGGCAGCCTGCTTCAAAGTCAGATaGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGC +
Preference number: 3 (lower is better)
Translates to: AFCGEAACFKVR*AFEKRAKKTLS
Trigger: GCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCAGGCTGCCTCTCCACAGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR-3UTR CAA 90 bp CTCTCCCTTATGAGAAGGATTTGGTTCTTTCAGGTGAAGTTCCAAATCACTAGACCATTTGTCCCCCAGTaGCCAGGTAAGGGTACCCAG +
Preference number: 3 (lower is better)
Translates to: LSLMRRIWFFQVKFQITRPFVPQ*PGKGTQ
Trigger: CTGGGTACCCTTACCTGGCAACTGGGGGACAAATGG...TCTAGTGATTTGGAACTTCACCTGAAAGAACCAAATCCTTCTCATAAGGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367596.5
3UTR-3UTR CAA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTTTGACTGCCCCAAACTaGGACTGTCTCAGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFLTAPN*DCLSLA
Trigger: GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 72 bp ATCCAGAGCCTGAAATGTCAGCCAACTTCACCAGCATaGGAAGTGCAATCAGGCGACATTATGCAGCAACAT +
Preference number: 3 (lower is better)
Translates to: IQSLKCQPTSPA*EVQSGDIMQQH
Trigger: ATGTTGCTGCATAATGTCGCCTGATTGCACTTCTCATGCTGGTGAAGTTGGCTGACATTTCAGGCTCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 72 bp ATGCTGCGGATACCCTTCTGTACATCGCTTGAGAAATaGCACTTCTTGAAGGCCCGTATTTCATCAACTTGG +
Preference number: 3 (lower is better)
Translates to: MLRIPFCTSLEK*HFLKARISSTW
Trigger: CCAAGTTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAGGGTATCCGCAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAGAATGTTCTGGGAAGTaGCTATTGCCAGTATGTTTC +
Preference number: 3 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARECSGK*LLPVCF
Trigger: GAAACATACTGGCAATAGCAACTTCCCAGAACATTC...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTTGCATATGTCTTCAATaGAGCAGAGTGTCGAGTGCC +
Preference number: 3 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLCICLQ*SRVSSA
Trigger: GGCACTCGACACTCTGCTCAATTGAAGACATATGCA...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR-3UTR CAA 90 bp ACAGAGAAGACCTCAGAAGCCTGGACTAGTGGAAAGCAGAACAAAATATGGGACCTCCTGGTATATGTTTaGTGCTGTCAGAGTAGTGGT +
Preference number: 3 (lower is better)
Translates to: TEKTSEAWTSGKQNKIWDLLVYV*CCQSSG
Trigger: ACCACTACTCTGACAGCACAAAACATATACCAGGAG...GTCCCATATTTTGTTCTGCTTTCCACTAGTCCAGGCTTCTGAGGTCTTCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR TCA 72 bp TTTGACAATGCTGCGGATACCCTTCTGTACATCGCTTaGGAAATGGCACTTCTTGAAGGCCCGTATTTCATC +
Preference number: 3 (lower is better)
Translates to: FDNAADTLLYIA*EMALLEGPYFI
Trigger: GATGAAATACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAGGGTATCCGCAGCATTGTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR GCA 72 bp CATAAGAGAATAGATGACTTGTACCCTGAAATCTTCTaGTGTCCCACCTTGACTGCCCCAAACTTGGACTGT +
Preference number: 3 (lower is better)
Translates to: HKRIDDLYPEIF*CPTLTAPNLDC
Trigger: ACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATTTCAGGGTACAAGTCATCTATTCTCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTAAGTCAGATGGGCGTTaGAAAAGCGTGCCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLKSDGR*KSVPRK
Trigger: TTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTT...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTTTATCACTGTACCCTTaGAGCATCAACCTCTCCTTC +
Preference number: 3 (lower is better)
Translates to: VETLTSKVIALGDGPLGSLSLYP*SINLSF
Trigger: GAAGGAGAGGTTGATGCTCAAAGGGTACAGTGATAA...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 72 bp ATTAACATGTTTAAACAGCGGCAACAGTTTACTCTATaGGTGTGCCTACTGAGGAAAGAAACGCCCCTCTCC +
Preference number: 3 (lower is better)
Translates to: INMFKQRQQFTL*VCLLRKETPLS
Trigger: GGAGAGGGGCGTTTCTTTCCTCAGTAGGCACACTCATAGAGTAAACTGTTGCCGCTGTTTAAACATGTTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 72 bp ATAAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTaGAATGTCAGCCAACTTCACCAGCATGAGAAGTGC +
Preference number: 3 (lower is better)
Translates to: IRLKHSFMLSRA*NVSQLHQHEKC
Trigger: GCACTTCTCATGCTGGTGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR GCA 72 bp TACAAATGGTGCTCATTTGAGGCAACTGTGACATTATaGAATGAGAAACATCTGTCCCCTTCCCTCTCAGGT +
Preference number: 3 (lower is better)
Translates to: YKWCSFEATVTL*NEKHLSPSLSG
Trigger: ACCTGAGAGGGAAGGGGACAGATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
3UTR-3UTR CAA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATTGACTGCCCCAAACTaGGACTGTCTCAGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSLTAPN*DCLSLA
Trigger: GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR TCA 72 bp CAGCTAGACTGCTTTTTAAACCAGCTTCTGGCAACATaGGGTGTGCAACTCATGAGTTTCAAACAGACTTCA +
Preference number: 3 (lower is better)
Translates to: QLDCFLNQLLAT*GVQLMSFKQTS
Trigger: TGAAGTCTGTTTGAAACTCATGAGTTGCACACCTCATGTTGCCAGAAGCTGGTTTAAAAAGCAGTCTAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CAA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTGAGAAATGGCACTTCTaGAAGGCCCGTATTTCATCA +
Preference number: 3 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFEKWHF*KARISS
Trigger: TGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTC...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAGAAATGGCACTTCTaGAAGGCCCGTATTTCATCA +
Preference number: 3 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGEKWHF*KARISS
Trigger: TGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTC...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTAACACGCCTTCGTTGTaGGGTAACCACGGAAAGAAG +
Preference number: 3 (lower is better)
Translates to: TATFRIKYTKALLYICPFNTPSL*GNHGKK
Trigger: CTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTT...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR TCA 72 bp TCATGTTCATCCAACACCAAATTAAGGGGTAATTTTTaGCAATGCTGCGGATACCCTTCTGTACATCGCTTG +
Preference number: 3 (lower is better)
Translates to: SCSSNTKLRGNF*QCCGYPSVHRL
Trigger: CAAGCGATGTACAGAAGGGTATCCGCAGCATTGTCAAAAATTACCCCTTAATTTGGTGTTGGATGAACATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR GCA 72 bp CTTCACCAGCATGAGAAGTGCAATCAGGCGACATTATaGAGCAACATAAATACATCGCTCAGTAAAATGGAA +
Preference number: 3 (lower is better)
Translates to: LHQHEKCNQATL*SNINTSLSKME
Trigger: TTCCATTTTACTGAGCGATGTATTTATGTTGCTGCATAATGTCGCCTGATTGCACTTCTCATGCTGGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 72 bp AAATGGCACTTCTTGAAGGCCCGTATTTCATCAACTTaGCAAAACTTCGCTTCAAGGTCATTTCCAAATGTC +
Preference number: 3 (lower is better)
Translates to: KWHFLKARISST*QNFASRSFPNV
Trigger: GACATTTGGAAATGACCTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACGGGCCTTCAAGAAGTGCCATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 72 bp GAGCATCAGATTAAACCACAAGCAGTTTGTTTAATCTaGCTTGCTAACACTACTCACACATCCACTCATCTG +
Preference number: 3 (lower is better)
Translates to: EHQIKPQAVCLI*LANTTHTSTHL
Trigger: CAGATGAGTGGATGTGTGAGTAGTGTTAGCAAGCCAGATTAAACAAACTGCTTGTGGTTTAATCTGATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR-3UTR CAA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTAAGTCAGATGGGCGTTaGAAAAGCGTGCCAAGAAAA +
Preference number: 3 (lower is better)
Translates to: LSINFILICGLSFILNSRKSDGR*KSVPRK
Trigger: TTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTT...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp TCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTCTCCCGTATTTCATCAACTaGGCAAAACTTCGCTTCAAG +
Preference number: 3 (lower is better)
Translates to: SINFILICGLSFILNSRLPYFIN*AKLRFK
Trigger: CTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACGG...GAGACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTTCTGGGAAGTTGCTATaGCCAGTATGTTTCCCTGGT +
Preference number: 3 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDISGKLL*PVCFPG
Trigger: ACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTCTCCAGAGAGATTACTaGTTCCTTCCACCATGTGAG +
Preference number: 3 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDILQRDY*FLPPCE
Trigger: CTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAG...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTAATGCTGTTAGGATTTaGAGATGCACAATGCAGACG +
Preference number: 3 (lower is better)
Translates to: TATFRIKYTKALLYICPFNAVRI*RCTMQT
Trigger: CGTCTGCATTGTGCATCTCAAAATCCTAACAGCATT...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357847.9
3UTR-3UTR CAA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCAAGAGCTCTAGAGGGGTaGGATGGTCCTATTTATTTA +
Preference number: 3 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSRALEG*DGPIYL
Trigger: TAAATAAATAGGACCATCCAACCCCTCTAGAGCTCT...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR-3UTR CAA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCAGAATGTTCTGGGAAGTaGCTATTGCCAGTATGTTTC +
Preference number: 3 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSECSGK*LLPVCF
Trigger: GAAACATACTGGCAATAGCAACTTCCCAGAACATTC...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CCA 72 bp TTTATTAGGTGCTTTCTCTCCCTTATGAGAAGGATTTaGTTCTTTCAGGTGAAGTTCCAAATCACTAGACAA +
Preference number: 3 (lower is better)
Translates to: FIRCFLSLMRRI*FFQVKFQITRQ
Trigger: TTGTCTAGTGATTTGGAACTTCACCTGAAAGAACCAAATCCTTCTCATAAGGGAGAGAAAGCACCTAATAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR GCA 90 bp CCTCCATTTGTCCCCCAGTTGCCAGGTAAGGGTACCCAGCTACCAGGTAACGGTGAGTGGTTCAGAAGGTaGCGCTGCGGGGGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: PPFVPQLPGKGTQLPGNGEWFRR*RCGGSQ
Trigger: CTGGCTGCCCCCGCAGCGGCACCTTCTGAACCACTC...ACCGTTACCTGGTAGCTGGGTACCCTTACCTGGCAACTGGGGGACAAATGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR CCA 90 bp TTGTCCCCCAGTTGCCAGGTAAGGGTACCCAGCTACCAGGTAACGGTGAGTGGTGCCATCCGCAGCACCTaGCAGGGGACAAGCGCCATG +
Preference number: 4 (lower is better)
Translates to: LSPSCQVRVPSYQVTVSGAIRST*QGTSAM
Trigger: CATGGCGCTTGTCCCCTGCCAGGTGCTGCGGATGGC...ACCACTCACCGTTACCTGGTAGCTGGGTACCCTTACCTGGCAACTGGGGGACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR TCA 90 bp CCCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCAGCTACTCGGGAGGCTaGGAAGGCAGGAGAATGGCA +
Preference number: 4 (lower is better)
Translates to: PPLPMPEGKESSMAAQSSSYSGG*EGRRMA
Trigger: TGCCATTCTCCTGCCTTCTCAGCCTCCCGAGTAGCT...GCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR TCA 90 bp ATGAACCCGGGAAGCGGAGCTTGCCGTGAGCTGAGATCACGCCACTGTACTCCAGTCGTGTGCATTCCGTaGTTCAGCCACCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: MNPGSGACRELRSRHCTPVVCIP*FSHPGI
Trigger: TATCCCAGGGTGGCTGAATCACGGAATGCACACGAC...TGGAGTACAGTGGCGTGATCTCAGCTCACGGCAAGCTCCGCTTCCCGGGTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR TCA 90 bp CCCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCCAGAAACATCCTCAGTaGCCTCTCTTCCCCACCCTT +
Preference number: 4 (lower is better)
Translates to: PPLPMPEGKESSMAAQSSQKHPQ*PLFPTL
Trigger: AAGGGTGGGGAAGAGAGGTCACTGAGGATGTTTCTG...GCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGTCCCATTCACCCTCCTaGCACACCCCCTATTCCCTC +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALASHSPS*HTPYSL
Trigger: GAGGGAATAGGGGGTGTGTCAGGAGGGTGAATGGGA...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGGGAGGCCGAGGCGTGTaGATCACAAGGTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALAGGRGV*ITRSGD
Trigger: ATCTCCTGACCTTGTGATCCACACGCCTCGGCCTCC...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR TCA 90 bp CCTCCATTTGTCCCCCAGTTGCCAGGTAAGGGTACCCAGCTACCAGGTAACGGTTCCGTAGGTCTGGTGTaGGGGCATTTCGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: PPFVPQLPGKGTQLPGNGSVGLV*GHFDGL
Trigger: AAGGCCATCGAAATGCCCTCACACCAGACCTACGGA...ACCGTTACCTGGTAGCTGGGTACCCTTACCTGGCAACTGGGGGACAAATGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR GCA 90 bp GTTCATCCCACGGTGGGTGCTCTGAAAAGCACCTTGAGGGCGAATGGGTCTCAGCATTTGTCCCCCAGTTaGCAGGTAAGGGTACCCAGC +
Preference number: 4 (lower is better)
Translates to: VHPTVGALKSTLRANGSQHLSPS*QVRVPS
Trigger: GCTGGGTACCCTTACCTGGCAACTGGGGGACAAATG...CTGAGACCCATTCGCCCTCAAGGTGCTTTTCAGAGCACCCACCGTGGGATGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR CCA 90 bp GTAGAAGTTGGGGGAGGCCAGCAGTTTGTGACCCCTCTTGTAAATGAGGATGATGCCATCCGCAGCACCTaGCAGGGGACAAGCGCCATG +
Preference number: 4 (lower is better)
Translates to: VEVGGGQQFVTPLVNEDDAIRST*QGTSAM
Trigger: CATGGCGCTTGTCCCCTGCCAGGTGCTGCGGATGGC...ATCATCCTCATTTACAAGAGGGGTCACAAACTGCTGGCCTCCCCCAACTTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR TCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGCACATGCCAGTTACATaGTGCACCCAGCACACCCAT +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALAHMPVT*CTQHTH
Trigger: ATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTG...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp CCCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCACAGCACATGTGTCTTaGACCTCAGCTCTGTCCATA +
Preference number: 4 (lower is better)
Translates to: PPLPMPEGKESSMAAQSSTAHVS*TSALSI
Trigger: TATGGACAGAGCTGAGGTTCAAGACACATGTGCTGT...GCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp TTGTCCCCCAGTTGCCAGGTAAGGGTACCCAGCTACCAGGTAACGGTGAGTGGTTCATCCCACGGTGGGTaGTCTGAAAAGCACCTTGAG +
Preference number: 4 (lower is better)
Translates to: LSPSCQVRVPSYQVTVSGSSHGG*SEKHLE
Trigger: CTCAAGGTGCTTTTCAGAGCACCCACCGTGGGATGA...ACCACTCACCGTTACCTGGTAGCTGGGTACCCTTACCTGGCAACTGGGGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR GCA 90 bp CCCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTTGACTTGGCAGCAGTaGTGGAATCTTCAAAAGCGC +
Preference number: 4 (lower is better)
Translates to: PPLPMPEGKESSMAAQSSLTWQQ*WNLQKR
Trigger: GCGCTTTTGAAGATTCCAGCACTGCTGCCAAGTCAA...GCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp ATGAACCCGGGAAGCGGAGCTTGCCGTGAGCTGAGATCACGCCACTGTACTCCAGATGATTCTGGCTCCTaGGCCAATGTGTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: MNPGSGACRELRSRHCTPDDSGS*ANVFQE
Trigger: TTCCTGGAACACATTGGCCCAGGAGCCAGAATCATC...TGGAGTACAGTGGCGTGATCTCAGCTCACGGCAAGCTCCGCTTCCCGGGTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CCA 90 bp CCCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCGGAAGGAGTCTTCAATaGCGGCTCAATCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPLPMPEGKESSMAAQSSGRSLQ*RLNLAL
Trigger: AAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCC...GCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGCCTCTCAGGTCCCCATaGTGGCCTAGGTTCATGATT +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALAPLRSP*WPRFMI
Trigger: AATCATGAACCTAGGCCACCATGGGGACCTGAGAGG...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCCGTAGGTCTGGTGTaGGGGCATTTCGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRSVGLV*GHFDGL
Trigger: AAGGCCATCGAAATGCCCTCACACCAGACCTACGGA...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGGGTGGCCTAGGTTCATaGTTACAGCCACCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALAGGLGS*LQPPLG
Trigger: TCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACC...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp TCCCACGGTGGGTGCTCTGAAAAGCACCTTGAGGGCGAATGGGTCTCAGGCCATGTCCGATGCTTTTGTTaGAGATTCTTCCCGTGTCAC +
Preference number: 4 (lower is better)
Translates to: SHGGCSEKHLEGEWVSGHVRCFC*RFFPCH
Trigger: GTGACACGGGAAGAATCTTCAACAAAAGCATCGGAC...ATGGCCTGAGACCCATTCGCCCTCAAGGTGCTTTTCAGAGCACCCACCGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR TCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGTGGCCCTTTGGGAAGTaGTTAGGTCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKWPFGK*LGHWGG
Trigger: TCCACCCCAGTGACCTAATCACTTCCCAAAGGGCCA...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TCTGGCTTGCTAACACTACTCACACATCCACTCATCTGCCCTCACTTCTCCCATCTCCCCCACTGCCAATaGCCGAGGGGAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SGLLTLLTHPLICPHFSHLPHCQ*PRGRSL
Trigger: AAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGGAG...ATGGGAGAAGTGAGGGCAGATGAGTGGATGTGTGAGTAGTGTTAGCAAGCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTGTCGTGTGCATTCCGTaGTTCAGCCACCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRIVVCIP*FSHPGI
Trigger: TATCCCAGGGTGGCTGAATCACGGAATGCACACGAC...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp CCCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCATGCTGTTAGGATTTTaGGATGCACAATGCAGACGT +
Preference number: 4 (lower is better)
Translates to: PPLPMPEGKESSMAAQSSMLLGF*DAQCRR
Trigger: ACGTCTGCATTGTGCATCTCAAAATCCTAACAGCAT...GCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR TCA 90 bp TCCCACGGTGGGTGCTCTGAAAAGCACCTTGAGGGCGAATGGGTCTCAGGCCATGCAATCACAGATCAATaGACGTCAGGAATTTCCAGC +
Preference number: 4 (lower is better)
Translates to: SHGGCSEKHLEGEWVSGHAITDQ*TSGISS
Trigger: GCTGGAAATTCCTGACGTTCATTGATCTGTGATTGC...ATGGCCTGAGACCCATTCGCCCTCAAGGTGCTTTTCAGAGCACCCACCGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR GCA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGCTGTCCCACCTTGACTaGCCCAAACTTGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRLSHLD*PKLGLS
Trigger: AGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAG...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTTGCCTCTCTTGCTCCTaGTTCCCACTTCCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRICLSCS*FPLPRV
Trigger: GACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCA...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTGTTCGCCAGAGGCCTaGACCGGCTGGGCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: WWPRFMITATFRIKYTKACSPEA*TGWAAR
Trigger: CCTTGCCGCCCAGCCGGTCCAGGCCTCTGGCGAACA...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp GATCTTTTATGTTTGGTTTTCATGGCTAAGGAACTGGCAGAGATCTGGAGCACTTGTTCGCCAGAGGCCTaGACCGGCTGGGCGGCAAGG +
Preference number: 4 (lower is better)
Translates to: DLLCLVFMAKELAEIWSTCSPEA*TGWAAR
Trigger: CCTTGCCGCCCAGCCGGTCCAGGCCTCTGGCGAACA...AGTGCTCCAGATCTCTGCCAGTTCCTTAGCCATGAAAACCAAACATAAAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp CCCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTTAAAAACAATTTTGTaGCTGGGCGCGGTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: PPLPMPEGKESSMAAQSSLKTIL*LGAVVH
Trigger: ATGAACCACCGCGCCCAGCCACAAAATTGTTTTTAA...GCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CCA 90 bp CCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCCTAGAGAGGGAAAATaGCTTCCCACCTACTTTAGT +
Preference number: 4 (lower is better)
Translates to: PHCQCPRGRSLQWRLNLAPREGK*LPTYFS
Trigger: ACTAAAGTAGGTGGGAAGCCATTTTCCCTCTCTAGG...AGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR CAA 72 bp GAAATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTaGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGC +
Preference number: 4 (lower is better)
Translates to: EIFCCPTLTAPN*DCLSLARVIVG
Trigger: GCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CAA 72 bp GATGACTTGTACCCTGAAATCTTCTGCTGTCCCACCTaGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCC +
Preference number: 4 (lower is better)
Translates to: DDLYPEIFCCPT*TAPNLDCLSLA
Trigger: GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATTTCAGGGTACAAGTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp GTAGAAGTTGGGGGAGGCCAGCAGTTTGTGACCCCTCTTGTAAATGAGGATGATTCCGTAGGTCTGGTGTaGGGGCATTTCGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: VEVGGGQQFVTPLVNEDDSVGLV*GHFDGL
Trigger: AAGGCCATCGAAATGCCCTCACACCAGACCTACGGA...ATCATCCTCATTTACAAGAGGGGTCACAAACTGCTGGCCTCCCCCAACTTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR TCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTCACATGCCAGTTACATaGTGCACCCAGCACACCCAT +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRIHMPVT*CTQHTH
Trigger: ATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTG...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAGGAGTAAGGACATCTaGCGGGAGGAGGAACAGGTT +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRIRSKDI*REEEQV
Trigger: AACCTGTTCCTCCTCCCGTCAGATGTCCTTACTCCT...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp AGGCCATTCAGGATCAGGTCCGATGCTTTTGTTGAAGATTCTTCCCGTGTCACCGTAAGACAGCAGGATTaGCATCCGCAGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: RPFRIRSDAFVEDSSRVTVRQQD*HPQHLA
Trigger: TGCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTAC...GGTGACACGGGAAGAATCTTCAACAAAAGCATCGGACCTGATCCTGAATGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR GCA 90 bp CCCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCAAATCCCAGCTAGACTaGTTTTTAAACCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PPLPMPEGKESSMAAQSSKSQLD*FLNQLL
Trigger: CAGAAGCTGGTTTAAAAAGCAGTCTAGCTGGGATTT...GCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCGCCATCCGCAGCACCTaGCAGGGGACAAGCGCCATG +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFAIRST*QGTSAM
Trigger: CATGGCGCTTGTCCCCTGCCAGGTGCTGCGGATGGC...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp GTAGAAGTTGGGGGAGGCCAGCAGTTTGTGACCCCTCTTGTAAATGAGGATGATTGCCTCTCTTGCTCCTaGTTCCCACTTCCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: VEVGGGQQFVTPLVNEDDCLSCS*FPLPRV
Trigger: GACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCA...ATCATCCTCATTTACAAGAGGGGTCACAAACTGCTGGCCTCCCCCAACTTCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCAGTAGCCAGGGGTGGTaGTCCACATCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTSSQGW*STSVVP
Trigger: TGGGACCACAGATGTGGACCACCACCCCTGGCTACT...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAAGTAGCCAGGGGTGGTaGTCCACATCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARSSQGW*STSVVP
Trigger: TGGGACCACAGATGTGGACCACCACCCCTGGCTACT...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTACTTGGCAGCAGTGCTaGAATCTTCAAAAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRITWQQC*NLQKRG
Trigger: CCCGCGCTTTTGAAGATTCCAGCACTGCTGCCAAGT...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGGCATATGTCTTCAATTaGGCAGAGTGTCGAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRAYVFN*AECRVP
Trigger: TGGCACTCGACACTCTGCTCAATTGAAGACATATGC...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR TCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGGAGGTGTGCAACTCATaGGTTTCAAACAGACTTCAT +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALAEVCNS*VSNRLH
Trigger: ATGAAGTCTGTTTGAAACTCATGAGTTGCACACCTC...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp CCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTAATGATCCAGAACACTaGTACAACAAAAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: PHCQCPRGRSLQWRLNLANDPEH*YNKNPN
Trigger: GTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATT...AGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR GCA 90 bp ATGAACCCGGGAAGCGGAGCTTGCCGTGAGCTGAGATCACGCCACTGTACTCCAGCAACTGTGACATTATaGAATGAGAAACATCTGTCC +
Preference number: 4 (lower is better)
Translates to: MNPGSGACRELRSRHCTPATVTL*NEKHLS
Trigger: GGACAGATGTTTCTCATTGCATAATGTCACAGTTGC...TGGAGTACAGTGGCGTGATCTCAGCTCACGGCAAGCTCCGCTTCCCGGGTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR GCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGATGTGGAGAGGCAGCCTaGTTCAAAGTCAGATGGGCG +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARCGEAA*FKVRWA
Trigger: CGCCCATCTGACTTTGAAGCAGGCTGCCTCTCCACA...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTCTCGCCATCCGCAGCACCTaGCAGGGGACAAGCGCCATG +
Preference number: 4 (lower is better)
Translates to: SINFILICGLSFILNSRLAIRST*QGTSAM
Trigger: CATGGCGCTTGTCCCCTGCCAGGTGCTGCGGATGGC...GAGACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGGTGAGGGCATTTCGATaGCCTTGTAGTTACACAGGA +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKVRAFR*PCSYTG
Trigger: TCCTGTGTAACTACAAGGCCATCGAAATGCCCTCAC...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGCTCGAGTCAGAAGACTaGAAAGATCAGTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKLESED*KDQSAH
Trigger: GTGTGCTGACTGATCTTTCCAGTCTTCTGACTCGAG...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp AATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCACATCGCTTGAGAAATaGCACTTCTTGAAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: NLLLSHLDCPKLGLSQPCTSLEK*HFLKAR
Trigger: ACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGT...GCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTGCAGATGGGTTGACTTaGCAGCAGTGCTGGAATCTT +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRIADGLT*QQCWNL
Trigger: AAGATTCCAGCACTGCTGCCAAGTCAACCCATCTGC...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TCTGGCTTGCTAACACTACTCACACATCCACTCATCTGCCCTCACTTCTCCCATGGTGGCCTAGGTTCATaGTTACAGCCACCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: SGLLTLLTHPLICPHFSHGGLGS*LQPPLG
Trigger: TCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACC...ATGGGAGAAGTGAGGGCAGATGAGTGGATGTGTGAGTAGTGTTAGCAAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp AATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCTATCACTGTACCCTTTaGGCATCAACCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: NLLLSHLDCPKLGLSQPCYHCTL*ASTSPS
Trigger: TGAAGGAGAGGTTGATGCTCAAAGGGTACAGTGATA...GCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGACCAACTTCACCAGCATaGGAAGTGCAATCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARPTSPA*EVQSGD
Trigger: GTCGCCTGATTGCACTTCTCATGCTGGTGAAGTTGG...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAGTTCCTTCCACCATGTaGGGACACAGCAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARVPSTM*GHSKKL
Trigger: CAGCTTCTTGCTGTGTCCTCACATGGTGGAAGGAAC...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TCTGGCTTGCTAACACTACTCACACATCCACTCATCTGCCCTCACTTCTCCCATCAGCTTCTGGCAACATaGGGTGTGCAACTCATGAGT +
Preference number: 4 (lower is better)
Translates to: SGLLTLLTHPLICPHFSHQLLAT*GVQLMS
Trigger: ACTCATGAGTTGCACACCTCATGTTGCCAGAAGCTG...ATGGGAGAAGTGAGGGCAGATGAGTGGATGTGTGAGTAGTGTTAGCAAGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGAATGATCCAGAACACTaGTACAACAAAAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALANDPEH*YNKNPN
Trigger: GTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATT...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR GCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCTTGTGCAGAGCAGCATaGATGGCACCAGGTCAATCC +
Preference number: 4 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTLCRAA*MAPGQS
Trigger: GGATTGACCTGGTGCCATGCATGCTGCTCTGCACAA...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp ACCACGGAAAGAAGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGGTCCGCTGCTCCTGCTaGGATACTGATGGTGCGATG +
Preference number: 4 (lower is better)
Translates to: TTERRKQHRFSSNSTCVLVRCSC*DTDGAM
Trigger: CATCGCACCATCAGTATCCCAGCAGGAGCAGCGGAC...CAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCTTCTTTCCGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp GTAGAAGTTGGGGGAGGCCAGCAGTTTGTGACCCCTCTTGTAAATGAGGATGATGATGATTCTGGCTCCTaGGCCAATGTGTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: VEVGGGQQFVTPLVNEDDDDSGS*ANVFQE
Trigger: TTCCTGGAACACATTGGCCCAGGAGCCAGAATCATC...ATCATCCTCATTTACAAGAGGGGTCACAAACTGCTGGCCTCCCCCAACTTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCAAAAGTAGCCAGGGGTaGTGGTCCACATCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTKSSQG*WSTSVV
Trigger: GACCACAGATGTGGACCACCACCCCTGGCTACTTTT...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGTTTCTCATCCTGCTATaGGCTGAATGTTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKFLILL*AECFCP
Trigger: GGGACAGAAACATTCAGCCCATAGCAGGATGAGAAA...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTACACGCCTTCGTTGTTaGGTAACCACGGAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRITRLRC*VTTERR
Trigger: TCTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGT...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp TTGAAGGCAAGAAGGTACAACACGCCTTCGTTGTTGGGTAACCACGGAAAGAAGAGGACACAGCATCTCTaGGACACACCCAGCTCCTAT +
Preference number: 4 (lower is better)
Translates to: LKARRYNTPSLLGNHGKKRTQHL*DTPSSY
Trigger: ATAGGAGCTGGGTGTGTCCCAGAGATGCTGTGTCCT...CTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTTGTACCTTCTTGCCTTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR CAA 72 bp CCAGCTCCTATGGCCTCTGGGAGACAAGGCTTCAAGTaGATTCATGACTTGCTGAGTTTGCATGGAAATCCC +
Preference number: 4 (lower is better)
Translates to: PAPMASGRQGFK*IHDLLSLHGNP
Trigger: GGGATTTCCATGCAAACTCAGCAAGTCATGAATCAACTTGAAGCCTTGTCTCCCAGAGGCCATAGGAGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGCTTCTGTACATCGCTTaGGAAATGGCACTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKLLYIA*EMALLE
Trigger: TTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAG...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGTTAAGGGGTAATTTTTaGCAATGCTGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKLRGNF*QCCGYP
Trigger: AGGGTATCCGCAGCATTGTCAAAAATTACCCCTTAA...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCTATGAGTGTGCCTACTaGGGAAAGAAACGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTYECAY*GKKRPS
Trigger: AGAGGGGCGTTTCTTTCCTCAGTAGGCACACTCATA...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTTCTGCTGTCCCACCTTaGCTGCCCCAAACTTGGACT +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLSAVPP*LPQTWT
Trigger: AGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGA...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGCCAGTGCTGAGCACTaGGGTCAGTGGGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGASAEH*GQWESK
Trigger: CTTGCTCTCCCACTGACCTCAGTGCTCAGCACTGGC...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTGTAAGACAGCAGGATTaGCATCCGCAGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLVRQQD*HPQHLA
Trigger: TGCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTAC...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp CCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTGCCTTACTCTATATATaGCCCTTTGACTTTAACATA +
Preference number: 4 (lower is better)
Translates to: PHCQCPRGRSLQWRLNLAALLYI*PFDFNI
Trigger: TATGTTAAAGTCAAAGGGGCATATATAGAGTAAGGC...AGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR GCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGCATTATTACAAATGGTaGTCATTTGAGGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALAHYYKW*SFEATV
Trigger: CACAGTTGCCTCAAATGAGCACCATTTGTAATAATG...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR GCA 90 bp AATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAATCCTTTAGTCATTaGTGGAGCAAGCTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: NLLLSHLDCPKLGLSQPCQSFSH*WSKLSV
Trigger: CACAGAAAGCTTGCTCCAGCAATGACTAAAGGATTG...GCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTGCCATCCGCAGCACCTaGCAGGGGACAAGCGCCATG +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFAIRST*QGTSAM
Trigger: CATGGCGCTTGTCCCCTGCCAGGTGCTGCGGATGGC...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTTGCCTCTCTTGCTCCTaGTTCCCACTTCCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLCLSCS*FPLPRV
Trigger: GACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCA...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCGTCCGCTGCTCCTGCTaGGATACTGATGGTGCGATG +
Preference number: 4 (lower is better)
Translates to: WWPRFMITATFRIKYTKAVRCSC*DTDGAM
Trigger: CATCGCACCATCAGTATCCCAGCAGGAGCAGCGGAC...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCAGCCTCCCGAGTACCTaGGACTACAGGCACACGCCA +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNISLPST*DYRHTP
Trigger: TGGCGTGTGCCTGTAGTCCCAGGTACTCGGGAGGCT...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp CCTCCATTTGTCCCCCAGTTGCCAGGTAAGGGTACCCAGCTACCAGGTAACGGTCTTATGAGAAGGATTTaGTTCTTTCAGGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PPFVPQLPGKGTQLPGNGLMRRI*FFQVKF
Trigger: GAACTTCACCTGAAAGAACCAAATCCTTCTCATAAG...ACCGTTACCTGGTAGCTGGGTACCCTTACCTGGCAACTGGGGGACAAATGGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR CCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTCTGGCACCCAGCTCTTaGACTTCCCAGGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLLAPSS*TSQALE
Trigger: TTCTAGAGCCTGGGAAGTCCAAGAGCTGGGTGCCAG...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTGGAAGTCTGTAATCTaGAAGAGGATCCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRWKSVI*KRILIR
Trigger: TCTGATGAGGATCCTCTTCCAGATTACAGACTTCCA...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp AATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCTCAATGAATGGGATTaGTGGGCTTTTAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: NLLLSHLDCPKLGLSQPCLNEWD*WAFKRG
Trigger: GCCTCTTTTAAAAGCCCACCAATCCCATTCATTGAG...GCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCGCATCAAAAGCTCACTaGGCCTGGGCCTTGTCTTTT +
Preference number: 4 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTASKAH*AWALSF
Trigger: AAAAGACAAGGCCCAGGCCCAGTGAGCTTTTGATGC...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAAAAGCCCAAAGTGGTaGAATCTAGTTGCTATAGCA +
Preference number: 4 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLAKSPKW*NLVAIA
Trigger: TGCTATAGCAACTAGATTCCACCACTTTGGGCTTTT...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR CAA 72 bp GTCTCAGGCCATTCAGGATCAGGTCCGATGCTTTTGTaGAAGATTCTTCCCGTGTCACCTCTTAGAAGCAGT +
Preference number: 4 (lower is better)
Translates to: VSGHSGSGPMLL*KILPVSPLRSS
Trigger: ACTGCTTCTAAGAGGTGACACGGGAAGAATCTTCAACAAAAGCATCGGACCTGATCCTGAATGGCCTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR TCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTCCGTAGGTCTGGTGTaGGGGCATTTCGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: WWPRFMITATFRIKYTKASVGLV*GHFDGL
Trigger: AAGGCCATCGAAATGCCCTCACACCAGACCTACGGA...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCTCCGTAGGTCTGGTGTaGGGGCATTTCGATGGCCTT +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFSVGLV*GHFDGL
Trigger: AAGGCCATCGAAATGCCCTCACACCAGACCTACGGA...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTCAAATGGTGCTCATTTaGGGCAACTGTGACATTATG +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRIQMVLI*GNCDIM
Trigger: CATAATGTCACAGTTGCCTCAAATGAGCACCATTTG...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCATCTGCTGTCCCACCTTaGCTGCCCCAAACTTGGACT +
Preference number: 4 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSSAVPP*LPQTWT
Trigger: AGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGA...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCGGCAGGAGGATTGCTTaGGCCCTGCAGTTTAAGGGT +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFGRRIA*ALQFKG
Trigger: ACCCTTAAACTGCAGGGCTCAAGCAATCCTCCTGCC...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCAGAAGAAAGCCAGTGCTaGGCACTGAGGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSEESQC*ALRSVG
Trigger: TCCCACTGACCTCAGTGCTCAGCACTGGCTTTCTTC...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTGAAGAAAGCCAGTGCTaGGCACTGAGGTCAGTGGGA +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFEESQC*ALRSVG
Trigger: TCCCACTGACCTCAGTGCTCAGCACTGGCTTTCTTC...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTGTAAGACAGCAGGATTaGCATCCGCAGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFVRQQD*HPQHLA
Trigger: TGCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTAC...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGAATGATCCAGAACACTaGTACAACAAAAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKNDPEH*YNKNPN
Trigger: GTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATT...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCGTTGCCAGGCTGGGGTaGAGTGGCATGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNIVARLG*SGMISA
Trigger: AGCTGAGATCATGCCACTGCACCCCAGCCTGGCAAC...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR GCA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCCAAATGTCCTTCTTGTaGAGAGCAGCATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTQMSFL*RAACMA
Trigger: TGCCATGCATGCTGCTCTGCACAAGAAGGACATTTG...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAATCAGGCGACATTATaGAGCAACATAAATACATCG +
Preference number: 4 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLANQATL*SNINTS
Trigger: CGATGTATTTATGTTGCTGCATAATGTCGCCTGATT...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTGGACTGTCTCAGCCTTaGCAGGGTTATAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLGLSQP*QGYSRQ
Trigger: CTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCC...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGACTCGAGTCAGAAGACTaGAAAGATCAGTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARLESED*KDQSAH
Trigger: GTGTGCTGACTGATCTTTCCAGTCTTCTGACTCGAG...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTCTTGCGCATCATTATTACAAATaGTGCTCATTTGAGGCAACT +
Preference number: 4 (lower is better)
Translates to: CQCPRGRSLQWRLNLALAHHYYK*CSFEAT
Trigger: AGTTGCCTCAAATGAGCACCATTTGTAATAATGATG...CGCAAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCCTGGCACCCAGCTCTTaGACTTCCCAGGCTCTAGAA +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFLAPSS*TSQALE
Trigger: TTCTAGAGCCTGGGAAGTCCAAGAGCTGGGTGCCAG...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTTGTCATAGGCATAAATaGTCCAGAACACTGCTACAA +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRICHRHK*SRTLLQ
Trigger: TTGTAGCAGTGTTCTGGATCATTTATGCCTATGACA...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCCTCCTGCTGGGATACTaGTGGTGCGATGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNILLLGY*WCDVLI
Trigger: GATGAGGACATCGCACCATCAGTATCCCAGCAGGAG...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR TCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTGGCAGGAGAATGGCATaGACCCGGGAAGCGGAGCTT +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFGRRMA*TREAEL
Trigger: AAGCTCCGCTTCCCGGGTTCATGCCATTCTCCTGCC...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR TCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCCCAACTTCACCAGCATaGGAAGTGCAATCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFPTSPA*EVQSGD
Trigger: GTCGCCTGATTGCACTTCTCATGCTGGTGAAGTTGG...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTCTCGGCAGGAGGATTGCTTaGGCCCTGCAGTTTAAGGGT +
Preference number: 4 (lower is better)
Translates to: SINFILICGLSFILNSRLGRRIA*ALQFKG
Trigger: ACCCTTAAACTGCAGGGCTCAAGCAATCCTCCTGCC...GAGACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTGGGAGAGCAAGGGCATaGGGAGCCTCAAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFGRARA*GASSIK
Trigger: TTTGATGCTTGAGGCTCCTCATGCCCTTGCTCTCCC...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTGCCAGTGCTGAGCACTaGGGTCAGTGGGAGAGCAAG +
Preference number: 4 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDIASAEH*GQWESK
Trigger: CTTGCTCTCCCACTGACCTCAGTGCTCAGCACTGGC...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGCTCCTGCAGATGGGTTaGCTTGGCAGCAGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLLLQMG*LGSSAG
Trigger: TCCAGCACTGCTGCCAAGTCAACCCATCTGCAGGAG...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCGTAAGACAGCAGGATTaGCATCCGCAGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNIVRQQD*HPQHLA
Trigger: TGCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTAC...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR GCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTTTGAGCTGCCTCTCTTaGTCCTGGTTCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFLSCLS*SWFPLP
Trigger: AGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAA...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCAATCAGAACCCAACCATaGTGGCACCCAGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSIRTQP*WHPALG
Trigger: TCCAAGAGCTGGGTGCCAGCATGGTTGGGTTCTGAT...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp AATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCTTCTTTTTCTCATCCTaGTATGGGCTGAATGTTTCT +
Preference number: 4 (lower is better)
Translates to: NLLLSHLDCPKLGLSQPCFFFSS*YGLNVS
Trigger: AGAAACATTCAGCCCATAGCAGGATGAGAAAAAGAA...GCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp AGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGAACCTCAGCTCTTCCAAAGCGTTCTCCTaGAGATGGGTTGACTTGGCA +
Preference number: 4 (lower is better)
Translates to: RKQHRFSSNSTCVLNLSSSKAFS*RWVDLA
Trigger: TGCCAAGTCAACCCATCTGCAGGAGAACGCTTTGGA...AGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp ACAGAGAAGACCTCAGAAGCCTGGACTAGTGGAAAGCAGAACAAAATATGGGACACACATCCACTCATCTaGCCTCACTTCTCCCATTCA +
Preference number: 4 (lower is better)
Translates to: TEKTSEAWTSGKQNKIWDTHPLI*PHFSHS
Trigger: TGAATGGGAGAAGTGAGGGCAGATGAGTGGATGTGT...GTCCCATATTTTGTTCTGCTTTCCACTAGTCCAGGCTTCTGAGGTCTTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp ACAGAGAAGACCTCAGAAGCCTGGACTAGTGGAAAGCAGAACAAAATATGGGACCTCGAGTCAGAAGACTaGAAAGATCAGTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: TEKTSEAWTSGKQNKIWDLESED*KDQSAH
Trigger: GTGTGCTGACTGATCTTTCCAGTCTTCTGACTCGAG...GTCCCATATTTTGTTCTGCTTTCCACTAGTCCAGGCTTCTGAGGTCTTCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGATGCCTCTCTTGCTCCTaGTTCCCACTTCCTCGAGTC +
Preference number: 4 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGCLSCS*FPLPRV
Trigger: GACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCA...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCGGAGCAAGCTTTCTGTaGAGAGGCAGCCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFGASFL*RGSLLQ
Trigger: TTGAAGCAGGCTGCCTCTCCACAGAAAGCTTGCTCC...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCCTGTATAGCAACAACTaGTGTCAACATCAATTAACA +
Preference number: 4 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLALYSNN*CQHQLT
Trigger: TGTTAATTGATGTTGACACCAGTTGTTGCTATACAG...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTAGAACCCAACCATGCTaGCACCCAGCTCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFRTQPC*HPALGL
Trigger: AAGTCCAAGAGCTGGGTGCCAGCATGGTTGGGTTCT...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
3UTR CAA 72 bp AAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTaGAACCTCAGCTCTGTCCATATTCCCTCTCCTGTG +
Preference number: 4 (lower is better)
Translates to: KQHRFSSNSTCV*NLSSVHIPSPV
Trigger: CACAGGAGAGGGAATATGGACAGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp GTAGAAGTTGGGGGAGGCCAGCAGTTTGTGACCCCTCTTGTAAATGAGGATGATTGTCATAGGCATAAATaGTCCAGAACACTGCTACAA +
Preference number: 4 (lower is better)
Translates to: VEVGGGQQFVTPLVNEDDCHRHK*SRTLLQ
Trigger: TTGTAGCAGTGTTCTGGATCATTTATGCCTATGACA...ATCATCCTCATTTACAAGAGGGGTCACAAACTGCTGGCCTCCCCCAACTTCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR TCA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGCTCCTGCTGGGATACTaGTGGTGCGATGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLLLLGY*WCDVLI
Trigger: GATGAGGACATCGCACCATCAGTATCCCAGCAGGAG...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCCACATGCCAGTTACATaGTGCACCCAGCACACCCAT +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNIHMPVT*CTQHTH
Trigger: ATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTG...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR TCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCTGCTATAGCATTCCGTaGTTCAGCCACCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFCYSIP*FSHPGI
Trigger: TATCCCAGGGTGGCTGAATCACGGAATGCTATAGCA...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR GCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCTTGAGCTGCCTCTCTTaGTCCTGGTTCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNILSCLS*SWFPLP
Trigger: AGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAA...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR GCA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTTGTGGAGAGGCAGCCTaGTTCAAAGTCAGATGGGCG +
Preference number: 4 (lower is better)
Translates to: LSINFILICGLSFILNSRCGEAA*FKVRWA
Trigger: CGCCCATCTGACTTTGAAGCAGGCTGCCTCTCCACA...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGACAATCCTTTAGTCATTaGTGGAGCAAGCTTTCTGTG +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARQSFSH*WSKLSV
Trigger: CACAGAAAGCTTGCTCCAGCAATGACTAAAGGATTG...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGATTGTGCAGAGCAGCATaGATGGCACCAGGTCAATCC +
Preference number: 4 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGLCRAA*MAPGQS
Trigger: GGATTGACCTGGTGCCATGCATGCTGCTCTGCACAA...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGAACTTCATCCTCATTTaGGGCTTATCCTTCATTTTA +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKNFILI*GLSFIL
Trigger: TAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTT...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCAAGGAGACCTTCCAGTaGCACTCTAACCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFKETFQ*HSNPDF
Trigger: GAAGTCAGGGTTAGAGTGGCACTGGAAGGTCTCCTT...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTATCAGAACCCAACCATaGTGGCACCCAGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFIRTQP*WHPALG
Trigger: TCCAAGAGCTGGGTGCCAGCATGGTTGGGTTCTGAT...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCCTCAGGTCCCCATGGTaGCCTAGGTTCATGATTACA +
Preference number: 4 (lower is better)
Translates to: WWPRFMITATFRIKYTKALRSPW*PRFMIT
Trigger: TGTAATCATGAACCTAGGCCACCATGGGGACCTGAG...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTGAGAAGGCAGGAGAATaGCATGAACCCGGGAAGCGG +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFEKAGE*HEPGKR
Trigger: CCGCTTCCCGGGTTCATGCCATTCTCCTGCCTTCTC...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTGGAGCAAGCTTTCTGTaGAGAGGCAGCCTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFGASFL*RGSLLQ
Trigger: TTGAAGCAGGCTGCCTCTCCACAGAAAGCTTGCTCC...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTAAAAGTAGCCAGGGGTaGTGGTCCACATCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFKSSQG*WSTSVV
Trigger: GACCACAGATGTGGACCACCACCCCTGGCTACTTTT...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAAATGAATGGGATTGGTaGGCTTTTAAAAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARNEWDW*AFKRGS
Trigger: GGAGCCTCTTTTAAAAGCCCACCAATCCCATTCATT...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTCACAGGAAGGGAAGAAATATCAGAAGTCATaGTGTTCCTTATGGTTGATG +
Preference number: 4 (lower is better)
Translates to: LDCLSLARVIVGRSQEGKKYQKS*CSLWLM
Trigger: CATCAACCATAAGGAACACCATGACTTCTGATATTT...CTTCCCTTCCTGTGACCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp AGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGAACCTCAGCTCTTCATGGCTAAGGAACTaGCAGAGATCTGGAGCACTT +
Preference number: 4 (lower is better)
Translates to: RKQHRFSSNSTCVLNLSSSWLRN*QRSGAL
Trigger: AAGTGCTCCAGATCTCTGCCAGTTCCTTAGCCATGA...AGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp ACCACGGAAAGAAGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGCTTGCTGAGTTTGCATaGAAATCCCAGCTAGACTGC +
Preference number: 4 (lower is better)
Translates to: TTERRKQHRFSSNSTCVLLAEFA*KSQLDC
Trigger: GCAGTCTAGCTGGGATTTCCATGCAAACTCAGCAAG...CAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCTTCTTTCCGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
3UTR CAA 72 bp GGTTTGAAGGCAAGAAGGTACAACACGCCTTCGTTGTaGGGTAACCACGGAAAGAAGAAAACAGCACAGATT +
Preference number: 4 (lower is better)
Translates to: GLKARRYNTPSL*GNHGKKKTAQI
Trigger: AATCTGTGCTGTTTTCTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTTGTACCTTCTTGCCTTCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TTGAAGGCAAGAAGGTACAACACGCCTTCGTTGTTGGGTAACCACGGAAAGAAGCATTTGAGGCAACTGTaGCATTATGCAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: LKARRYNTPSLLGNHGKKHLRQL*HYAMRN
Trigger: GTTTCTCATTGCATAATGTCACAGTTGCCTCAAATG...CTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTTGTACCTTCTTGCCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTAGTCAGATGGGCGTTTaGAAAGCGTGCCAAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFSQMGV*KACQEN
Trigger: GTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACT...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCTTGAAATGCATTCCGTaGTTCAGCCACCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFLKCIP*FSHPGI
Trigger: TATCCCAGGGTGGCTGAATCACGGAATGCATTTCAA...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494282.6
CDS-3UTR TCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTATGTTATCCAGAGCCTaGAATGTCAGCCAACTTCAC +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLMLSRA*NVSQLH
Trigger: GTGAAGTTGGCTGACATTTCAGGCTCTGGATAACAT...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTTGGCCCTTTGGGAAGTaGTTAGGTCACTGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDIWPFGK*LGHWGG
Trigger: TCCACCCCAGTGACCTAATCACTTCCCAAAGGGCCA...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGACATCCTGCTATGGGCTaGATGTTTCTGTCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGHPAMG*MFLSPQ
Trigger: TTGAGGGGACAGAAACATTCAGCCCATAGCAGGATG...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TTGAAGGCAAGAAGGTACAACACGCCTTCGTTGTTGGGTAACCACGGAAAGAAGAGGAAAACTTCAAATTaGGGAGTAAGGACATCTGAC +
Preference number: 4 (lower is better)
Translates to: LKARRYNTPSLLGNHGKKRKTSN*GVRTSD
Trigger: GTCAGATGTCCTTACTCCTCAATTTGAAGTTTTCCT...CTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTTGTACCTTCTTGCCTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCAAGGGTACACCCACATaGCAGTTACATGATGCACCC +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNIKGTPT*QLHDAP
Trigger: GGGTGCATCATGTAACTGGCATGTGGGTGTACCCTT...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR GCA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTGCCTTACTCTATATATaGCCCTTTGACTTTAACATA +
Preference number: 4 (lower is better)
Translates to: PLRSPWWPRFMITATFRIALLYI*PFDFNI
Trigger: TATGTTAAAGTCAAAGGGGCATATATAGAGTAAGGC...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR GCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCACAAATGTCCTTCTTGTaGAGAGCAGCATGCATGGCA +
Preference number: 4 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSQMSFL*RAACMA
Trigger: TGCCATGCATGCTGCTCTGCACAAGAAGGACATTTG...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCACACCAGCATGAGAAGTaGAATCAGGCGACATTATGC +
Preference number: 4 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSHQHEK*NQATLC
Trigger: GCATAATGTCGCCTGATTGCACTTCTCATGCTGGTG...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTCACCAGCATGAGAAGTaGAATCAGGCGACATTATGC +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFHQHEK*NQATLC
Trigger: GCATAATGTCGCCTGATTGCACTTCTCATGCTGGTG...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTAAGGAGACCTTCCAGTaGCACTCTAACCCTGACTTC +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFKETFQ*HSNPDF
Trigger: GAAGTCAGGGTTAGAGTGGCACTGGAAGGTCTCCTT...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR GCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCCTGGGAAGTTGCTATTaGCAGTATGTTTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFLGSCY*QYVSLV
Trigger: GACCAGGGAAACATACTGGCAATAGCAACTTCCCAG...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp CAGCTCCTGGTATATGTTTTGTGCTGTCAGAGTAGTGGTGGTGGAATGTGGGTAACCAGTAAGAACCTTTaGCTGTTGTCTGTAGAGAAT +
Preference number: 4 (lower is better)
Translates to: QLLVYVLCCQSSGGGMWVTSKNL*LLSVEN
Trigger: ATTCTCTACAGACAACAGGCAAAGGTTCTTACTGGT...TACCCACATTCCACCACCACTACTCTGACAGCACAAAACATATACCAGGAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCAGTGAGGGCATTTCGATaGCCTTGTAGTTACACAGGA +
Preference number: 4 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSVRAFR*PCSYTG
Trigger: TCCTGTGTAACTACAAGGCCATCGAAATGCCCTCAC...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp ATACTGATTCAAAAACAAAAATTCCACGATGTAGGCCTAACAGAACTTGATAGGGTCCGCTGCTCCTGCTaGGATACTGATGGTGCGATG +
Preference number: 4 (lower is better)
Translates to: ILIQKQKFHDVGLTELDRVRCSC*DTDGAM
Trigger: CATCGCACCATCAGTATCCCAGCAGGAGCAGCGGAC...CCTATCAAGTTCTGTTAGGCCTACATCGTGGAATTTTTGTTTTTGAATCAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCTGCTTCAAAGTCAGATaGGCGTTTGAAAAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFCFKVR*AFEKRA
Trigger: GGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTTGCTTCAAAGTCAGATaGGCGTTTGAAAAGCGTGCC +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFCFKVR*AFEKRA
Trigger: GGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGCAGAGCAGCATGCATaGCACCAGGTCAATCCTTTA +
Preference number: 4 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGAEQHA*HQVNPL
Trigger: TAAAGGATTGACCTGGTGCCATGCATGCTGCTCTGC...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAGCCAGTATGTTTCCCTaGTCTTACAGATGTATGTTT +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARASMFP*SYRCMF
Trigger: AAACATACATCTGTAAGACCAGGGAAACATACTGGC...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp ATACTGATTCAAAAACAAAAATTCCACGATGTAGGCCTAACAGAACTTGATAGGGTCGTGTGCATTCCGTaGTTCAGCCACCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: ILIQKQKFHDVGLTELDRVVCIP*FSHPGI
Trigger: TATCCCAGGGTGGCTGAATCACGGAATGCACACGAC...CCTATCAAGTTCTGTTAGGCCTACATCGTGGAATTTTTGTTTTTGAATCAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR TCA 90 bp TATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATGCAATGAGAAACATCTCCTGCTGGGATACTaGTGGTGCGATGTCCTCATC +
Preference number: 4 (lower is better)
Translates to: YYKWCSFEATVTLCNEKHLLLGY*WCDVLI
Trigger: GATGAGGACATCGCACCATCAGTATCCCAGCAGGAG...ATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCATATCACTGTACCCTTTaGGCATCAACCTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSYHCTL*ASTSPS
Trigger: TGAAGGAGAGGTTGATGCTCAAAGGGTACAGTGATA...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTTATGAGTGTGCCTACTaGGGAAAGAAACGCCCCTCT +
Preference number: 4 (lower is better)
Translates to: LSINFILICGLSFILNSRYECAY*GKKRPS
Trigger: AGAGGGGCGTTTCTTTCCTCAGTAGGCACACTCATA...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTCTTACTATATAAAATGTaGGCAGGGGCTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SGKLLLPVCFPGLTDVCFLLYKM*AGAGCG
Trigger: ACCACACCCAGCCCCTGCTCACATTTTATATAGTAA...GAAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCGGGAGAGCAAGGGCATaGGGAGCCTCAAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFGRARA*GASSIK
Trigger: TTTGATGCTTGAGGCTCCTCATGCCCTTGCTCTCCC...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp GATCTTTTATGTTTGGTTTTCATGGCTAAGGAACTGGCAGAGATCTGGAGCACTGTAACGTGCTCTGAATaGATGTCCCCAGATGATCTT +
Preference number: 4 (lower is better)
Translates to: DLLCLVFMAKELAEIWSTVTCSE*MSPDDL
Trigger: AAGATCATCTGGGGACATTCATTCAGAGCACGTTAC...AGTGCTCCAGATCTCTGCCAGTTCCTTAGCCATGAAAACCAAACATAAAAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp TATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATGCAATGAGAAACATGTAAGACAGCAGGATTaGCATCCGCAGCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: YYKWCSFEATVTLCNEKHVRQQD*HPQHLA
Trigger: TGCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTAC...ATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR GCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTTTGAGCTGCCTCTCTTaGTCCTGGTTCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFLSCLS*SWFPLP
Trigger: AGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAA...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR GCA 90 bp CCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCAAGGGTACACCCACATaGCAGTTACATGATGCACCC +
Preference number: 4 (lower is better)
Translates to: PRFMITATFRIKYTKALLKGTPT*QLHDAP
Trigger: GGGTGCATCATGTAACTGGCATGTGGGTGTACCCTT...GAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR GCA 90 bp ACAGAGAAGACCTCAGAAGCCTGGACTAGTGGAAAGCAGAACAAAATATGGGACGCAACTGTGACATTATaGAATGAGAAACATCTGTCC +
Preference number: 4 (lower is better)
Translates to: TEKTSEAWTSGKQNKIWDATVTL*NEKHLS
Trigger: GGACAGATGTTTCTCATTGCATAATGTCACAGTTGC...GTCCCATATTTTGTTCTGCTTTCCACTAGTCCAGGCTTCTGAGGTCTTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTGGACTGTCTCAGCCTTaGCAGGGTTATAGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDIGLSQP*QGYSRQ
Trigger: CTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCC...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTCTGTCCCACCTTGACTaGCCCAAACTTGGACTGTCT +
Preference number: 4 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDILSHLD*PKLGLS
Trigger: AGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAG...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTATTGCCTTCTCTCCCTaGAGAAGGTTGCTTTTCATA +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLIAFSP*RRLLFI
Trigger: TATGAAAAGCAACCTTCTGCAGGGAGAGAAGGCAAT...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR GCA 90 bp TCTGGCTTGCTAACACTACTCACACATCCACTCATCTGCCCTCACTTCTCCCATTATTCTTTCATAAATTaGAAGCTTTCTGAGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SGLLTLLTHPLICPHFSHYSFIN*KLSEGR
Trigger: CCTACCCTCAGAAAGCTTGCAATTTATGAAAGAATA...ATGGGAGAAGTGAGGGCAGATGAGTGGATGTGTGAGTAGTGTTAGCAAGCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp CTCTCCCTTATGAGAAGGATTTGGTTCTTTCAGGTGAAGTTCCAAATCACTAGAGTGAGGGCATTTCGATaGCCTTGTAGTTACACAGGA +
Preference number: 4 (lower is better)
Translates to: LSLMRRIWFFQVKFQITRVRAFR*PCSYTG
Trigger: TCCTGTGTAACTACAAGGCCATCGAAATGCCCTCAC...TCTAGTGATTTGGAACTTCACCTGAAAGAACCAAATCCTTCTCATAAGGGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR CCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCCTCGAGTCAGAAGACTaGAAAGATCAGTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNILESED*KDQSAH
Trigger: GTGTGCTGACTGATCTTTCCAGTCTTCTGACTCGAG...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp GTAGAAGTTGGGGGAGGCCAGCAGTTTGTGACCCCTCTTGTAAATGAGGATGATAGGATGATACTTACTTaGCACAAAACATCTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VEVGGGQQFVTPLVNEDDRMILT*HKTSVF
Trigger: AAAGACAGATGTTTTGTGCCAAGTAAGTATCATCCT...ATCATCCTCATTTACAAGAGGGGTCACAAACTGCTGGCCTCCCCCAACTTCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCTTGATAGGTAGAAGTTaGGGGAGGCCAGCAGTTTGT +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNILIGRS*GRPAVC
Trigger: ACAAACTGCTGGCCTCCCCCAACTTCTACCTATCAA...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGCTCAGGTCCCCATGGTaGCCTAGGTTCATGATTACA +
Preference number: 4 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLLRSPW*PRFMIT
Trigger: TGTAATCATGAACCTAGGCCACCATGGGGACCTGAG...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTCCTCTCAGGTCCCCATaGTGGCCTAGGTTCATGATT +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFPLRSP*WPRFMI
Trigger: AATCATGAACCTAGGCCACCATGGGGACCTGAGAGG...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTTGGAAGTCTGTAATCTaGAAGAGGATCCTCATCAGA +
Preference number: 4 (lower is better)
Translates to: VETLTSKVIALGDGPLGSWKSVI*KRILIR
Trigger: TCTGATGAGGATCCTCTTCCAGATTACAGACTTCCA...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCATTTCTCATCCTGCTATaGGCTGAATGTTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSFLILL*AECFCP
Trigger: GGGACAGAAACATTCAGCCCATAGCAGGATGAGAAA...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp ACAGAGAAGACCTCAGAAGCCTGGACTAGTGGAAAGCAGAACAAAATATGGGACGCAGTTTGTTTAATCTaGCTTGCTAACACTACTCAC +
Preference number: 4 (lower is better)
Translates to: TEKTSEAWTSGKQNKIWDAVCLI*LANTTH
Trigger: GTGAGTAGTGTTAGCAAGCCAGATTAAACAAACTGC...GTCCCATATTTTGTTCTGCTTTCCACTAGTCCAGGCTTCTGAGGTCTTCTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTTGTCATAGGCATAAATaGTCCAGAACACTGCTACAA +
Preference number: 4 (lower is better)
Translates to: VETLTSKVIALGDGPLGSCHRHK*SRTLLQ
Trigger: TTGTAGCAGTGTTCTGGATCATTTATGCCTATGACA...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp AGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGAACCTCAGCTCTTGTCATAGGCATAAATaGTCCAGAACACTGCTACAA +
Preference number: 4 (lower is better)
Translates to: RKQHRFSSNSTCVLNLSSCHRHK*SRTLLQ
Trigger: TTGTAGCAGTGTTCTGGATCATTTATGCCTATGACA...AGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTAGAAATGGCACTTCTTaGAGGCCCGTATTTCATCAA +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFRNGTS*RPVFHQ
Trigger: TTGATGAAATACGGGCCTTCAAGAAGTGCCATTTCT...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCGTTCCTTCCACCATGTaGGGACACAGCAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFVPSTM*GHSKKL
Trigger: CAGCTTCTTGCTGTGTCCTCACATGGTGGAAGGAAC...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATTGAGCTGCCTCTCTTaGTCCTGGTTCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSLSCLS*SWFPLP
Trigger: AGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp AGCACTTTTTCCAAAGTCCTTCTCAGAAATCCTATGAAGGAAAACTTCAAATTGTTGAGCTGCCTCTCTTaGTCCTGGTTCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: STFSKVLLRNPMKENFKLLSCLS*SWFPLP
Trigger: AGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAA...CAATTTGAAGTTTTCCTTCATAGGATTTCTGAGAAGGACTTTGGAAAAAGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCGTTAGGATTTTGAGATaGACAATGCAGACGTCAGGT +
Preference number: 4 (lower is better)
Translates to: WWPRFMITATFRIKYTKAVRILR*TMQTSG
Trigger: ACCTGACGTCTGCATTGTGCATCTCAAAATCCTAAC...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CCA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGGTGAGGGCATTTCGATaGCCTTGTAGTTACACAGGA +
Preference number: 4 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLVRAFR*PCSYTG
Trigger: TCCTGTGTAACTACAAGGCCATCGAAATGCCCTCAC...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp CCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCGTGAGGGCATTTCGATaGCCTTGTAGTTACACAGGA +
Preference number: 4 (lower is better)
Translates to: PRFMITATFRIKYTKALLVRAFR*PCSYTG
Trigger: TCCTGTGTAACTACAAGGCCATCGAAATGCCCTCAC...GAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTGATGATTCTGGCTCCTaGGCCAATGTGTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFDDSGS*ANVFQE
Trigger: TTCCTGGAACACATTGGCCCAGGAGCCAGAATCATC...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGGGAAGGAGTCTTCAATaGCGGCTCAATCTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLGRSLQ*RLNLAL
Trigger: AAGAGCTAGATTGAGCCGCCATTGAAGACTCCTTCC...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTACATCGCTTGAGAAATaGCACTTCTTGAAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: LSINFILICGLSFILNSRTSLEK*HFLKAR
Trigger: ACGGGCCTTCAAGAAGTGCCATTTCTCAAGCGATGT...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGACTGTATAGCAACAACTaGTGTCAACATCAATTAACA +
Preference number: 4 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARLYSNN*CQHQLT
Trigger: TGTTAATTGATGTTGACACCAGTTGTTGCTATACAG...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCAGAACCCAACCATGCTaGCACCCAGCTCTTGGACTT +
Preference number: 4 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFRTQPC*HPALGL
Trigger: AAGTCCAAGAGCTGGGTGCCAGCATGGTTGGGTTCT...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTAAAGCTCACTGGGCCTaGGCCTTGTCTTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFKAHWA*ALSFYS
Trigger: AGAATAAAAAGACAAGGCCCAGGCCCAGTGAGCTTT...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000629020.2
3UTR CAA 72 bp AGGCAGTGTAAAAAGGAATGTTCTGGGAAGTTGCTATaGCCAGTATGTTTCCCTGGTCTTACAGATGTATGT +
Preference number: 4 (lower is better)
Translates to: RQCKKECSGKLL*PVCFPGLTDVC
Trigger: ACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAACATTCCTTTTTACACTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTTTAAGGGGTAATTTTTaGCAATGCTGCGGATACCCT +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFLRGNF*QCCGYP
Trigger: AGGGTATCCGCAGCATTGTCAAAAATTACCCCTTAA...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR TCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCACATCCTGCTATGGGCTaGATGTTTCTGTCCCCTCAA +
Preference number: 4 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSHPAMG*MFLSPQ
Trigger: TTGAGGGGACAGAAACATTCAGCCCATAGCAGGATG...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTGAAACAAAAGTGGTATaGCAAAGTTCTCCATTACCT +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLETKVV*QSSPLP
Trigger: AGGTAATGGAGAACTTTGGCATACCACTTTTGTTTC...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCAGAGCAGAGTGTCGAGTaGCAAACTTCAACCAAGCTG +
Preference number: 4 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSEQSVE*QTSTKL
Trigger: CAGCTTGGTTGAAGTTTGGCACTCGACACTCTGCTC...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR GCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTCTCCCTGCAGAAGGTTaGTTTTCATATTTTTATGCA +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLLPAEG*FSYFYA
Trigger: TGCATAAAAATATGAAAAGCAACCTTCTGCAGGGAG...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTCTCGAGTCAGAAGACTaGAAAGATCAGTCAGCACAC +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFLESED*KDQSAH
Trigger: GTGTGCTGACTGATCTTTCCAGTCTTCTGACTCGAG...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CCA 90 bp ATACTGATTCAAAAACAAAAATTCCACGATGTAGGCCTAACAGAACTTGATAGGGGGATTTCACCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: ILIQKQKFHDVGLTELDRGISPC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGGTGAAATCCC...CCTATCAAGTTCTGTTAGGCCTACATCGTGGAATTTTTGTTTTTGAATCAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTAAACAATTTTGTGGCTaGGCGCGGTGGTTCATGTCT +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFKQFCG*ARWFMS
Trigger: AGACATGAACCACCGCGCCCAGCCACAAAATTGTTT...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCGCAGAGCAGCATGCATaGCACCAGGTCAATCCTTTA +
Preference number: 4 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFAEQHA*HQVNPL
Trigger: TAAAGGATTGACCTGGTGCCATGCATGCTGCTCTGC...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGACTCAATGAATGGGATTaGTGGGCTTTTAAAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGLNEWD*WAFKRG
Trigger: GCCTCTTTTAAAAGCCCACCAATCCCATTCATTGAG...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATGCAATGAGAAACATAGCTCCTATGGCCTCTaGGAGACAAGGCTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: YYKWCSFEATVTLCNEKHSSYGL*ETRLQV
Trigger: AACTTGAAGCCTTGTCTCCCAGAGGCCATAGGAGCT...ATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGTGTGACATTATGCAATaGGAAACATCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLCDIMQ*ETSVPF
Trigger: GAAGGGGACAGATGTTTCTCATTGCATAATGTCACA...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp CTCTCCCTTATGAGAAGGATTTGGTTCTTTCAGGTGAAGTTCCAAATCACTAGATTTGGTTCTTTCAGGTaGAGTTCCAAATCACTAGAC +
Preference number: 4 (lower is better)
Translates to: LSLMRRIWFFQVKFQITRFGSFR*SSKSLD
Trigger: GTCTAGTGATTTGGAACTTCACCTGAAAGAACCAAA...TCTAGTGATTTGGAACTTCACCTGAAAGAACCAAATCCTTCTCATAAGGGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR TCA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTCTTCTGTACATCGCTTaGGAAATGGCACTTCTTGAA +
Preference number: 4 (lower is better)
Translates to: LSINFILICGLSFILNSRLLYIA*EMALLE
Trigger: TTCAAGAAGTGCCATTTCTCAAGCGATGTACAGAAG...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTAAACTTCAACCAAGCTaGTCATACTGTAGTTCTGTG +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFKLQPS*SYCSSV
Trigger: CACAGAACTACAGTATGATCAGCTTGGTTGAAGTTT...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR GCA 90 bp CAGTTTGTGACCCCTCTTGTAAATGAGGATGATACTTACTTGGCACAAAACATCAATGATCCAGAACACTaGTACAACAAAAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: QFVTPLVNEDDTYLAQNINDPEH*YNKNPN
Trigger: GTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATT...GATGTTTTGTGCCAAGTAAGTATCATCCTCATTTACAAGAGGGGTCACAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR GCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTAATGATCCAGAACACTaGTACAACAAAAACCCCAAC +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFNDPEH*YNKNPN
Trigger: GTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATT...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR GCA 90 bp GATCTTTTATGTTTGGTTTTCATGGCTAAGGAACTGGCAGAGATCTGGAGCACTCATTATTACAAATGGTaGTCATTTGAGGCAACTGTG +
Preference number: 4 (lower is better)
Translates to: DLLCLVFMAKELAEIWSTHYYKW*SFEATV
Trigger: CACAGTTGCCTCAAATGAGCACCATTTGTAATAATG...AGTGCTCCAGATCTCTGCCAGTTCCTTAGCCATGAAAACCAAACATAAAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCCTGGGAAGTTGCTATTaGCAGTATGTTTCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFLGSCY*QYVSLV
Trigger: GACCAGGGAAACATACTGGCAATAGCAACTTCCCAG...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp ATACTGATTCAAAAACAAAAATTCCACGATGTAGGCCTAACAGAACTTGATAGGGTGAGGGCATTTCGATaGCCTTGTAGTTACACAGGA +
Preference number: 4 (lower is better)
Translates to: ILIQKQKFHDVGLTELDRVRAFR*PCSYTG
Trigger: TCCTGTGTAACTACAAGGCCATCGAAATGCCCTCAC...CCTATCAAGTTCTGTTAGGCCTACATCGTGGAATTTTTGTTTTTGAATCAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CCA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTTCATGGTGTTCCTTATaGTTGATGTTCTTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: VETLTSKVIALGDGPLGSSWCSL*LMFFVV
Trigger: TACAACAAAGAACATCAACCATAAGGAACACCATGA...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp ATCATATCGATGGGCAGCTTACGAGTAAAGAGAGATACCTCTTCCTCCCATCTTTCATGGTGTTCCTTATaGTTGATGTTCTTTGTTGTA +
Preference number: 4 (lower is better)
Translates to: IISMGSLRVKRDTSSSHLSWCSL*LMFFVV
Trigger: TACAACAAAGAACATCAACCATAAGGAACACCATGA...AAGATGGGAGGAAGAGGTATCTCTCTTTACTCGTAAGCTGCCCATCGATATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTTGTAAAAGCCCAAAGTaGTGGAATCTAGTTGCTATA +
Preference number: 4 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFCKSPK*WNLVAI
Trigger: TATAGCAACTAGATTCCACCACTTTGGGCTTTTACA...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CCA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGAGGACTTGTATGTACTaGACCAGTAAGAACCTTTGC +
Preference number: 4 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLRTCMY*TSKNLC
Trigger: GCAAAGGTTCTTACTGGTCCAGTACATACAAGTCCT...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTTGCCAAATTTCTTATTaGAAAATCCCAGGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFCQISY*KIPGSV
Trigger: TACACTGCCTGGGATTTTTCAATAAGAAATTTGGCA...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTTGCCAAATTTCTTATTaGAAAATCCCAGGCAGTGTA +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFCQISY*KIPGSV
Trigger: TACACTGCCTGGGATTTTTCAATAAGAAATTTGGCA...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR TCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATTACTATATAAAATGTaGGCAGGGGCTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSLLYKM*AGAGCG
Trigger: ACCACACCCAGCCCCTGCTCACATTTTATATAGTAA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGGTAGAGAATAGTCGATaGTGTTTCATGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLVENSR*CFMFLK
Trigger: CTTCAGGAACATGAAACATCATCGACTATTCTCTAC...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR GCA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTAATCAGGCGACATTATaGAGCAACATAAATACATCG +
Preference number: 4 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFNQATL*SNINTS
Trigger: CGATGTATTTATGTTGCTGCATAATGTCGCCTGATT...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR GCA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTTTCTTTTTCTCATCCTaGTATGGGCTGAATGTTTCT +
Preference number: 4 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFFFFSS*YGLNVS
Trigger: AGAAACATTCAGCCCATAGCAGGATGAGAAAAAGAA...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTCTGGTATATGTTTTGTaGTGTCAGAGTAGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFLVYVL*CQSSGG
Trigger: ACCACCACTACTCTGACAGCACAAAACATATACCAG...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTTACAAATCTGAGAGCTaGCATAAGAGAATAGATGAC +
Preference number: 4 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFYKSES*HKRIDD
Trigger: GTCATCTATTCTCTTATGCCAGCTCTCAGATTTGTA...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCAAAAGCTCACTGGGCCTaGGCCTTGTCTTTTTATTCT +
Preference number: 4 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSKAHWA*ALSFYS
Trigger: AGAATAAAAAGACAAGGCCCAGGCCCAGTGAGCTTT...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATGCAATGAGAAACATGAACTGGCAGAGATCTaGAGCACTTTTTCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: YYKWCSFEATVTLCNEKHELAEI*STFSKV
Trigger: GACTTTGGAAAAAGTGCTCCAGATCTCTGCCAGTTC...ATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp CCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATGTTTGGTTTTCATaGCTAAGGAACTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: PRFMITATFRIKYTKALLYVWFS*LRNWQR
Trigger: TCTCTGCCAGTTCCTTAGCCATGAAAACCAAACATA...GAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATGCAATGAGAAACATTGTGACATTATGCAATaGGAAACATCTGTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: YYKWCSFEATVTLCNEKHCDIMQ*ETSVPF
Trigger: GAAGGGGACAGATGTTTCTCATTGCATAATGTCACA...ATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp ACAGCCACCTTTAGGATTAAATACACAAAAGCCTTACTCTATATATGCCCCTTTCATTTGAGGCAACTGTaGCATTATGCAATGAGAAAC +
Preference number: 4 (lower is better)
Translates to: TATFRIKYTKALLYICPFHLRQL*HYAMRN
Trigger: GTTTCTCATTGCATAATGTCACAGTTGCCTCAAATG...AAAGGGGCATATATAGAGTAAGGCTTTTGTGTATTTAATCCTAAAGGTGGCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR TCA 90 bp AGCACTTTTTCCAAAGTCCTTCTCAGAAATCCTATGAAGGAAAACTTCAAATTGCAAATGGTGCTCATTTaGGGCAACTGTGACATTATG +
Preference number: 4 (lower is better)
Translates to: STFSKVLLRNPMKENFKLQMVLI*GNCDIM
Trigger: CATAATGTCACAGTTGCCTCAAATGAGCACCATTTG...CAATTTGAAGTTTTCCTTCATAGGATTTCTGAGAAGGACTTTGGAAAAAGTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTCGTATTTCATCAACTTaGCAAAACTTCGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDIRISST*QNFASR
Trigger: CCTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACG...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCAATGAATGGGATTGGTaGGCTTTTAAAAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFNEWDW*AFKRGS
Trigger: GGAGCCTCTTTTAAAAGCCCACCAATCCCATTCATT...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TATTACAAATGGTGCTCATTTGAGGCAACTGTGACATTATGCAATGAGAAACATCCACCTACTTTAGTTTaGCAGTTTTCTGTGTATCCC +
Preference number: 4 (lower is better)
Translates to: YYKWCSFEATVTLCNEKHPPTLV*QFSVYP
Trigger: GGGATACACAGAAAACTGCCAAACTAAAGTAGGTGG...ATGTTTCTCATTGCATAATGTCACAGTTGCCTCAAATGAGCACCATTTGTAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR TCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATGTCATAGGCATAAATaGTCCAGAACACTGCTACAA +
Preference number: 4 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSCHRHK*SRTLLQ
Trigger: TTGTAGCAGTGTTCTGGATCATTTATGCCTATGACA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCAATGTTCTGGGAAGTTaGTATTGCCAGTATGTTTCC +
Preference number: 4 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFNVLGS*YCQYVS
Trigger: GGAAACATACTGGCAATAGCAACTTCCCAGAACATT...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp AGCACTTTTTCCAAAGTCCTTCTCAGAAATCCTATGAAGGAAAACTTCAAATTGGTGTGTGTGTCTCATTaGAGGAGCTCAATTAATCTT +
Preference number: 4 (lower is better)
Translates to: STFSKVLLRNPMKENFKLVCVSH*RSSINL
Trigger: AAGATTAATTGAGCTCCTGCAATGAGACACACACAC...CAATTTGAAGTTTTCCTTCATAGGATTTCTGAGAAGGACTTTGGAAAAAGTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp GATCTGGAGCACTTTTTCCAAAGTCCTTCTCAGAAATCCTATGAAGGAAAACTTCATCATTATTACAAATaGTGCTCATTTGAGGCAACT +
Preference number: 4 (lower is better)
Translates to: DLEHFFQSPSQKSYEGKLHHYYK*CSFEAT
Trigger: AGTTGCCTCAAATGAGCACCATTTGTAATAATGATG...AAGTTTTCCTTCATAGGATTTCTGAGAAGGACTTTGGAAAAAGTGCTCCAGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CCA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCCGTATTTCATCAACTTaGCAAAACTTCGCTTCAAGG +
Preference number: 4 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFRISST*QNFASR
Trigger: CCTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACG...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTAAATATCAGAAGTCATaGTGTTCCTTATGGTTGATG +
Preference number: 4 (lower is better)
Translates to: LSINFILICGLSFILNSRKYQKS*CSLWLM
Trigger: CATCAACCATAAGGAACACCATGACTTCTGATATTT...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR TCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATTAGAATCTTTAAAATaGGAGTGGCCACAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSLESLK*EWPQVF
Trigger: GAAGACTTGTGGCCACTCTCATTTTAAAGATTCTAA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR GCA 90 bp GCCTTGTCTTTTTATTCTGTTTCTCGACTCCTACAATCTGTGATCCATGATATTAACTTCATCCTCATTTaGGGCTTATCCTTCATTTTA +
Preference number: 4 (lower is better)
Translates to: ALSFYSVSRLLQSVIHDINFILI*GLSFIL
Trigger: TAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTT...AATATCATGGATCACAGATTGTAGGAGTCGAGAAACAGAATAAAAAGACAAGGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CCA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCATACAAATCTGAGAGCTaGCATAAGAGAATAGATGAC +
Preference number: 4 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSYKSES*HKRIDD
Trigger: GTCATCTATTCTCTTATGCCAGCTCTCAGATTTGTA...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp GTCCCAGCTACTCGGGAGGCTGAGAAGGCAGGAGAATGGCATGAACCCGGGAAGCTTGAGCTGCCTCTCTaGCTCCTGGTTCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: VPATREAEKAGEWHEPGKLELPL*LLVPTS
Trigger: GGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAG...CTTCCCGGGTTCATGCCATTCTCCTGCCTTCTCAGCCTCCCGAGTAGCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CAA 90 bp CCCCACTGCCAATGCCCGAGGGGAAGGAGTCTTCAATGGCGGCTCAATCTAGCTAGTAAGACAGCAGGATaGCCATCCGCAGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: PHCQCPRGRSLQWRLNLASKTAG*PSAAPG
Trigger: GCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTACT...AGCTAGATTGAGCCGCCATTGAAGACTCCTTCCCCTCGGGCATTGGCAGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CAA 90 bp GTTCATCCCACGGTGGGTGCTCTGAAAAGCACCTTGAGGGCGAATGGGTCTCAGAGTAAGACAGCAGGATaGCCATCCGCAGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: VHPTVGALKSTLRANGSQSKTAG*PSAAPG
Trigger: GCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTACT...CTGAGACCCATTCGCCCTCAAGGTGCTTTTCAGAGCACCCACCGTGGGATGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR CAA 90 bp CTCCATTTGTCCCCCAGTTGCCAGGTAAGGGTACCCAGCTACCAGGTAACGGTGCCATTTGTCCCCCAGTaGCCAGGTAAGGGTACCCAG +
Preference number: 5 (lower is better)
Translates to: LHLSPSCQVRVPSYQVTVPFVPQ*PGKGTQ
Trigger: CTGGGTACCCTTACCTGGCAACTGGGGGACAAATGG...CACCGTTACCTGGTAGCTGGGTACCCTTACCTGGCAACTGGGGGACAAATGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR CAA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGTAAGACAGCAGGATaGCCATCCGCAGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLASKTAG*PSAAPG
Trigger: GCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTACT...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCCTTGAGCTGCCTCTCTaGCTCCTGGTTCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLALELPL*LLVPTS
Trigger: GGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAG...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp CCTCCATTTGTCCCCCAGTTGCCAGGTAAGGGTACCCAGCTACCAGGTAACGGTGCTCTGAAAAGCACCTaGAGGGCGAATGGGTCTCAG +
Preference number: 5 (lower is better)
Translates to: PPFVPQLPGKGTQLPGNGALKST*RANGSQ
Trigger: CTGAGACCCATTCGCCCTCAAGGTGCTTTTCAGAGC...ACCGTTACCTGGTAGCTGGGTACCCTTACCTGGCAACTGGGGGACAAATGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR CAA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGGCTGGCACCCAGCTCTaGGACTTCCCAGGCTCTAGA +
Preference number: 5 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRAGTQL*DFPGSR
Trigger: TCTAGAGCCTGGGAAGTCCAAGAGCTGGGTGCCAGC...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS CCA 90 bp CAGTCCCGGAGAGAGATGAGCTTCTTGAGCTGCCTCTCTTGCTCCTaGTTCCCACTTCCTCGAGTCAGAAGACTGGAAAGATCAGTCAGC +
Preference number: 5 (lower is better)
Translates to: QSRREMSFLSCLSCS*FPLPRVRRLERSVS
Trigger: GCTGACTGATCTTTCCAGTCTTCTGACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAGAAGCTCATCTCTCTCCGGGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367601.8
ENST00000458219.1
ENST00000494282.6
ENST00000629020.2
ENST00000646199.1
CDS-3UTR CAA 90 bp GTAGAAGTTGGGGGAGGCCAGCAGTTTGTGACCCCTCTTGTAAATGAGGATGATCTTGAGCTGCCTCTCTaGCTCCTGGTTCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: VEVGGGQQFVTPLVNEDDLELPL*LLVPTS
Trigger: GGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAG...ATCATCCTCATTTACAAGAGGGGTCACAAACTGCTGGCCTCCCCCAACTTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CAA 90 bp GTTCATCCCACGGTGGGTGCTCTGAAAAGCACCTTGAGGGCGAATGGGTCTCAGGGTCCGATGCTTTTGTaGAAGATTCTTCCCGTGTCA +
Preference number: 5 (lower is better)
Translates to: VHPTVGALKSTLRANGSQGPMLL*KILPVS
Trigger: TGACACGGGAAGAATCTTCAACAAAAGCATCGGACC...CTGAGACCCATTCGCCCTCAAGGTGCTTTTCAGAGCACCCACCGTGGGATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS GCA 90 bp AACATCCAGTCCCGGAGAGAGATGAGCTTCTTGAGCTGCCTCTCTTaGTCCTGGTTCCCACTTCCTCGAGTCAGAAGACTGGAAAGATCA +
Preference number: 5 (lower is better)
Translates to: NIQSRREMSFLSCLS*SWFPLPRVRRLERS
Trigger: TGATCTTTCCAGTCTTCTGACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAGAAGCTCATCTCTCTCCGGGACTGGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367601.8
ENST00000458219.1
ENST00000494282.6
ENST00000629020.2
ENST00000646199.1
CDS-3UTR CAA 90 bp AAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCATGTGAGGACACAGCAAGAAGTAAGACAGCAGGATaGCCATCCGCAGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: KRLQRDYLFLPPCEDTARSKTAG*PSAAPG
Trigger: GCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTACT...TCTTGCTGTGTCCTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp GTAGAAGTTGGGGGAGGCCAGCAGTTTGTGACCCCTCTTGTAAATGAGGATGATTGGGATTTCACCATGTaGGCCAGGATGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: VEVGGGQQFVTPLVNEDDWDFTM*ARMVSI
Trigger: GATGGAGACCATCCTGGCCAACATGGTGAAATCCCA...ATCATCCTCATTTACAAGAGGGGTCACAAACTGCTGGCCTCCCCCAACTTCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CAA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTGCTGGCACCCAGCTCTaGGACTTCCCAGGCTCTAGA +
Preference number: 5 (lower is better)
Translates to: VETLTSKVIALGDGPLGSAGTQL*DFPGSR
Trigger: TCTAGAGCCTGGGAAGTCCAAGAGCTGGGTGCCAGC...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGCTCCAGAGAGATTACTaGTTCCTTCCACCATGTGAG +
Preference number: 5 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRLQRDY*FLPPCE
Trigger: CTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAG...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS TCA 90 bp GAGAAGGTACATATGGCGGTAAGTCCGCTGCTCCTGCTGGGATACTaGTGGTGCGATGTCCTCATCTCGATTAATATAAAGGGCAGAACC +
Preference number: 5 (lower is better)
Translates to: EKVHMAVSPLLLLGY*WCDVLISINIKGRT
Trigger: GGTTCTGCCCTTTATATTAATCGAGATGAGGACATCGCACCATCAGTATCCCAGCAGGAGCAGCGGACTTACCGCCATATGTACCTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367601.8
ENST00000447498.5
ENST00000458219.1
ENST00000646199.1
CDS GCA 90 bp TTCTGGCTCCTGGGCCAATGTGTTCCAGGAAAGGGTACACCCACATaGCAGTTACATGATGCACCCAGCACACCCATAATATATAGCCAA +
Preference number: 5 (lower is better)
Translates to: FWLLGQCVPGKGTPT*QLHDAPSTPIIYSQ
Trigger: TTGGCTATATATTATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTGGGTGTACCCTTTCCTGGAACACATTGGCCCAGGAGCCAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367601.8
ENST00000458219.1
ENST00000646199.1
CDS-3UTR CAA 90 bp TTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCAGGGTTATAGTAGGCAGGTTATCACTGTACCCTTaGAGCATCAACCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: LTAPNLDCLSLARVIVGRLSLYP*SINLSF
Trigger: GAAGGAGAGGTTGATGCTCAAAGGGTACAGTGATAA...CCTGCCTACTATAACCCTGGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCCTTGAGCTGCCTCTCTaGCTCCTGGTTCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: WWPRFMITATFRIKYTKALELPL*LLVPTS
Trigger: GGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAG...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000357847.9
ENST00000646199.1
CDS-3UTR CAA 90 bp AATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCGAATGTTCTGGGAAGTaGCTATTGCCAGTATGTTTC +
Preference number: 5 (lower is better)
Translates to: NLLLSHLDCPKLGLSQPCECSGK*LLPVCF
Trigger: GAAACATACTGGCAATAGCAACTTCCCAGAACATTC...GCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTCTTGAGCTGCCTCTCTaGCTCCTGGTTCCCACTTCC +
Preference number: 5 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFLELPL*LLVPTS
Trigger: GGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAG...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CAA 90 bp CCTCTCAGGTCCCCATGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAGGTTCAGGGTGGCTTaGTCTTTATTAGTCAGCATT +
Preference number: 5 (lower is better)
Translates to: PLRSPWWPRFMITATFRIRFRVA*SLLVSI
Trigger: AATGCTGACTAATAAAGACAAAGCCACCCTGAACCT...AATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCATGGGGACCTGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CAA 90 bp ATCTTCTGCTGTCCCACCTTGACTGCCCCAAACTTGGACTGTCTCAGCCTTGCCATGCCAAATTTCTTATaGAAAAATCCCAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: IFCCPTLTAPNLDCLSLAMPNFL*KNPRQC
Trigger: ACACTGCCTGGGATTTTTCAATAAGAAATTTGGCAT...GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCCTCCAGAGAGATTACTaGTTCCTTCCACCATGTGAG +
Preference number: 5 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTLQRDY*FLPPCE
Trigger: CTCACATGGTGGAAGGAACAAGTAATCTCTCTGGAG...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp CAGCTCCTGGTATATGTTTTGTGCTGTCAGAGTAGTGGTGGTGGAATGTGGGTAAACAGCACATGTGTCTaGAACCTCAGCTCTGTCCAT +
Preference number: 5 (lower is better)
Translates to: QLLVYVLCCQSSGGGMWVNSTCV*NLSSVH
Trigger: ATGGACAGAGCTGAGGTTCAAGACACATGTGCTGTT...TACCCACATTCCACCACCACTACTCTGACAGCACAAAACATATACCAGGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp GGGATTGGTGGGCTTTTAAAAGAGGCTCCAGAGAGATTACTTGTTCCTTCCACCAAGTCAGATGGGCGTTaGAAAAGCGTGCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: GIGGLLKEAPERLLVPSTKSDGR*KSVPRK
Trigger: TTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTT...GGTGGAAGGAACAAGTAATCTCTCTGGAGCCTCTTTTAAAAGCCCACCAATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGATTGACTGCCCCAAACTaGGACTGTCTCAGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGLTAPN*DCLSLA
Trigger: GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGATTCTGCTGTCCCACCTaGACTGCCCCAAACTTGGAC +
Preference number: 5 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGFCCPT*TAPNLD
Trigger: GTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAA...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TGCTTCAAAGTCAGATGGGCGTTTGAAAAGCGTGCCAAGAAAACTTTAAGCTTTTTCTGCTGTCCCACCTaGACTGCCCCAAACTTGGAC +
Preference number: 5 (lower is better)
Translates to: CFKVRWAFEKRAKKTLSFFCCPT*TAPNLD
Trigger: GTCCAAGTTTGGGGCAGTCAAGGTGGGACAGCAGAA...AAAGCTTAAAGTTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTTTGAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CAA 90 bp ACCACGGAAAGAAGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGTACAACACGCCTTCGTaGTTGGGTAACCACGGAAAG +
Preference number: 5 (lower is better)
Translates to: TTERRKQHRFSSNSTCVLYNTPS*LGNHGK
Trigger: CTTTCCGTGGTTACCCAACAACGAAGGCGTGTTGTA...CAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCTTCTTTCCGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp AGGCCATTCAGGATCAGGTCCGATGCTTTTGTTGAAGATTCTTCCCGTGTCACCCCTTATGAGAAGGATTaGGTTCTTTCAGGTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RPFRIRSDAFVEDSSRVTPYEKD*VLSGEV
Trigger: AACTTCACCTGAAAGAACCAAATCCTTCTCATAAGG...GGTGACACGGGAAGAATCTTCAACAAAAGCATCGGACCTGATCCTGAATGGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367596.5
CDS-3UTR CAA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTTTGACTGCCCCAAACTaGGACTGTCTCAGCCTTGCC +
Preference number: 5 (lower is better)
Translates to: LSINFILICGLSFILNSRLTAPN*DCLSLA
Trigger: GGCAAGGCTGAGACAGTCCAAGTTTGGGGCAGTCAA...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp CAGCTCCTGGTATATGTTTTGTGCTGTCAGAGTAGTGGTGGTGGAATGTGGGTAAGACAAGGCTTCAAGTaGATTCATGACTTGCTGAGT +
Preference number: 5 (lower is better)
Translates to: QLLVYVLCCQSSGGGMWVRQGFK*IHDLLS
Trigger: ACTCAGCAAGTCATGAATCAACTTGAAGCCTTGTCT...TACCCACATTCCACCACCACTACTCTGACAGCACAAAACATATACCAGGAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS CCA 90 bp TTCAACCAAGCTGATCATACTGTAGTTCTGTGTAAAAGCCCAAAGTaGTGGAATCTAGTTGCTATAGCATTCCGTGATTCAGCCACCCTG +
Preference number: 5 (lower is better)
Translates to: FNQADHTVVLCKSPK*WNLVAIAFRDSATL
Trigger: CAGGGTGGCTGAATCACGGAATGCTATAGCAACTAGATTCCACCACTTTGGGCTTTTACACAGAACTACAGTATGATCAGCTTGGTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CAA 90 bp ATACTGATTCAAAAACAAAAATTCCACGATGTAGGCCTAACAGAACTTGATAGGAGTAAGACAGCAGGATaGCCATCCGCAGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: ILIQKQKFHDVGLTELDRSKTAG*PSAAPG
Trigger: GCCAGGTGCTGCGGATGGCAATCCTGCTGTCTTACT...CCTATCAAGTTCTGTTAGGCCTACATCGTGGAATTTTTGTTTTTGAATCAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS-3UTR CAA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCATCTGGGAAGTTGCTATaGCCAGTATGTTTCCCTGGT +
Preference number: 5 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSSGKLL*PVCFPG
Trigger: ACCAGGGAAACATACTGGCAATAGCAACTTCCCAGA...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp AGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGAACCTCAGCTCTCCCACCTACTTTAGTTaGGCAGTTTTCTGTGTATCC +
Preference number: 5 (lower is better)
Translates to: RKQHRFSSNSTCVLNLSSPTYFS*AVFCVS
Trigger: GGATACACAGAAAACTGCCAAACTAAAGTAGGTGGG...AGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp GATCTGGAGCACTTTTTCCAAAGTCCTTCTCAGAAATCCTATGAAGGAAAACTTTGCAGATGGGTTGACTaGGCAGCAGTGCTGGAATCT +
Preference number: 5 (lower is better)
Translates to: DLEHFFQSPSQKSYEGKLCRWVD*AAVLES
Trigger: AGATTCCAGCACTGCTGCCAAGTCAACCCATCTGCA...AAGTTTTCCTTCATAGGATTTCTGAGAAGGACTTTGGAAAAAGTGCTCCAGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp AGAAAACAGCACAGATTCAGCTCAAACAGCACATGTGTCTTGAACCTCAGCTCTCTCCTGGTATATGTTTaGTGCTGTCAGAGTAGTGGT +
Preference number: 5 (lower is better)
Translates to: RKQHRFSSNSTCVLNLSSLLVYV*CCQSSG
Trigger: ACCACTACTCTGACAGCACAAAACATATACCAGGAG...AGAGCTGAGGTTCAAGACACATGTGCTGTTTGAGCTGAATCTGTGCTGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp ACAGAGAAGACCTCAGAAGCCTGGACTAGTGGAAAGCAGAACAAAATATGGGACCCTAAGGCAAGGACTTaGGATTTTAAAAAGCCATGC +
Preference number: 5 (lower is better)
Translates to: TEKTSEAWTSGKQNKIWDPKART*DFKKPC
Trigger: GCATGGCTTTTTAAAATCCAAAGTCCTTGCCTTAGG...GTCCCATATTTTGTTCTGCTTTCCACTAGTCCAGGCTTCTGAGGTCTTCTCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp GTTGAAACCCTAACCTCTAAGGTTATAGCATTAGGAGATGGCCCTTTGGGAAGTCCGTATTTCATCAACTaGGCAAAACTTCGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: VETLTSKVIALGDGPLGSPYFIN*AKLRFK
Trigger: CTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACGG...ACTTCCCAAAGGGCCATCTCCTAATGCTATAACCTTAGAGGTTAGGGTTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTGAGAAATGGCACTTCTaGAAGGCCCGTATTTCATCA +
Preference number: 5 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFEKWHF*KARISS
Trigger: TGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTC...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTCTCCACTGGGCCTGGGCCTaGTCTTTTTATTCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: SINFILICGLSFILNSRLHWAWA*SFYSVS
Trigger: AGAAACAGAATAAAAAGACAAGGCCCAGGCCCAGTG...GAGACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTTGCATATGTCTTCAATaGAGCAGAGTGTCGAGTGCC +
Preference number: 5 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFCICLQ*SRVSSA
Trigger: GGCACTCGACACTCTGCTCAATTGAAGACATATGCA...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS-3UTR CAA 90 bp CAGCTCCTGGTATATGTTTTGTGCTGTCAGAGTAGTGGTGGTGGAATGTGGGTAAAGTTGATTCATGACTaGCTGAGTTTGCATGGAAAT +
Preference number: 5 (lower is better)
Translates to: QLLVYVLCCQSSGGGMWVKLIHD*LSLHGN
Trigger: ATTTCCATGCAAACTCAGCAAGTCATGAATCAACTT...TACCCACATTCCACCACCACTACTCTGACAGCACAAAACATATACCAGGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCTTTTTAAAAACAATTTaGTGGCTGGGCGCGGTGGTT +
Preference number: 5 (lower is better)
Translates to: WWPRFMITATFRIKYTKAFLKTI*WLGAVV
Trigger: AACCACCGCGCCCAGCCACAAAATTGTTTTTAAAAA...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CAA 90 bp TTCTGGGAAGTTGCTATTGCCAGTATGTTTCCCTGGTCTTACAGATGTATGTTTAAGTCAGATGGGCGTTaGAAAAGCGTGCCAAGAAAA +
Preference number: 5 (lower is better)
Translates to: FWEVAIASMFPWSYRCMFKSDGR*KSVPRK
Trigger: TTTTCTTGGCACGCTTTTCAAACGCCCATCTGACTT...AAACATACATCTGTAAGACCAGGGAAACATACTGGCAATAGCAACTTCCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp AAGGTTAAAGCACAGCTTCATGTTATCCAGAGCCTGAAATGTCAGCCAACTTCAAGAGCTCTAGAGGGGTaGGATGGTCCTATTTATTTA +
Preference number: 5 (lower is better)
Translates to: KVKAQLHVIQSLKCQPTSRALEG*DGPIYL
Trigger: TAAATAAATAGGACCATCCAACCCCTCTAGAGCTCT...TGAAGTTGGCTGACATTTCAGGCTCTGGATAACATGAAGCTGTGCTTTAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TCTTCTACAGTCTCCTTAGAGAGCTCTAGAGGGGTTGGATGGTCCTATTTATTTTTAGGGATGAGGGTTTaGAGGGAAATTGTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SSTVSLESSRGVGWSYLFLGMRV*REIVFF
Trigger: GAAGAACACAATTTCCCTCAAAACCCTCATCCCTAA...AAATAAATAGGACCATCCAACCCCTCTAGAGCTCTCTAAGGAGACTGTAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TGGTGGCCTAGGTTCATGATTACAGCCACCTTTAGGATTAAATACACAAAAGCCAAGAACCTTTGCCTGTaGTCTGTAGAGAATAGTCGA +
Preference number: 5 (lower is better)
Translates to: WWPRFMITATFRIKYTKAKNLCL*SVENSR
Trigger: TCGACTATTCTCTACAGACAACAGGCAAAGGTTCTT...GGCTTTTGTGTATTTAATCCTAAAGGTGGCTGTAATCATGAACCTAGGCCACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTGAGAAATGGCACTTCTaGAAGGCCCGTATTTCATCA +
Preference number: 5 (lower is better)
Translates to: LSINFILICGLSFILNSREKWHF*KARISS
Trigger: TGATGAAATACGGGCCTTCAAGAAGTGCCATTTCTC...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGATTAGGGATGAGGGTTTaGAGGGAAATTGTGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGLGMRV*REIVFF
Trigger: GAAGAACACAATTTCCCTCAAAACCCTCATCCCTAA...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp AGCACTTTTTCCAAAGTCCTTCTCAGAAATCCTATGAAGGAAAACTTCAAATTGAACACGCCTTCGTTGTaGGGTAACCACGGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: STFSKVLLRNPMKENFKLNTPSL*GNHGKK
Trigger: CTTCTTTCCGTGGTTACCCAACAACGAAGGCGTGTT...CAATTTGAAGTTTTCCTTCATAGGATTTCTGAGAAGGACTTTGGAAAAAGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646199.1
CDS-3UTR CAA 90 bp TTTGGGAAGAATTCTTTAACACACAGTGAGGGTGAGTTCTTTTGGAAACAACTGAATGCTGTTAGGATTTaGAGATGCACAATGCAGACG +
Preference number: 5 (lower is better)
Translates to: FGKNSLTHSEGEFFWKQLNAVRI*RCTMQT
Trigger: CGTCTGCATTGTGCATCTCAAAATCCTAACAGCATT...CAGTTGTTTCCAAAAGAACTCACCCTCACTGTGTGTTAAAGAATTCTTCCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357847.9
CDS-3UTR CAA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTAGAGCTCTAGAGGGGTaGGATGGTCCTATTTATTTA +
Preference number: 5 (lower is better)
Translates to: LSINFILICGLSFILNSRRALEG*DGPIYL
Trigger: TAAATAAATAGGACCATCCAACCCCTCTAGAGCTCT...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp CTATCCATTAACTTCATCCTCATTTGCGGCTTATCCTTCATTTTAAACTCCCGTGAATGTTCTGGGAAGTaGCTATTGCCAGTATGTTTC +
Preference number: 5 (lower is better)
Translates to: LSINFILICGLSFILNSRECSGK*LLPVCF
Trigger: GAAACATACTGGCAATAGCAACTTCCCAGAACATTC...ACGGGAGTTTAAAATGAAGGATAAGCCGCAAATGAGGATGAAGTTAATGGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCACACTGGGCCTGGGCCTaGTCTTTTTATTCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSHWAWA*SFYSVS
Trigger: AGAAACAGAATAAAAAGACAAGGCCCAGGCCCAGTG...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp GTGATCCATGATATTAAATATCAGAAGTCATGGTGTTCCTTATGGTTGATGTTCTTATCACTGTACCCTTaGAGCATCAACCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: VIHDIKYQKSWCSLWLMFLSLYP*SINLSF
Trigger: GAAGGAGAGGTTGATGCTCAAAGGGTACAGTGATAA...GAACATCAACCATAAGGAACACCATGACTTCTGATATTTAATATCATGGATCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp CTGAGTTTCCTGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAATGCCAAATTTCTTATaGAAAAATCCCAGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: LSFLSELSMQTYQIQAIGMPNFL*KNPRQC
Trigger: ACACTGCCTGGGATTTTTCAATAAGAAATTTGGCAT...TCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACAGGAAACTCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp TGTCAGAACTTTCCATGCAAACTTACCAAATACAGGCAATTGGAGAAAAATTCACCGTATTTCATCAACTaGGCAAAACTTCGCTTCAAG +
Preference number: 5 (lower is better)
Translates to: CQNFPCKLTKYRQLEKNSPYFIN*AKLRFK
Trigger: CTTGAAGCGAAGTTTTGCCAAGTTGATGAAATACGG...TGAATTTTTCTCCAATTGCCTGTATTTGGTAAGTTTGCATGGAAAGTTCTGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000494282.6
ENST00000629020.2
CDS-3UTR CAA 90 bp ATACTGATTCAAAAACAAAAATTCCACGATGTAGGCCTAACAGAACTTGATAGGGAGGATGATACTTACTaGGCACAAAACATCTGTCTT +
Preference number: 5 (lower is better)
Translates to: ILIQKQKFHDVGLTELDREDDTY*AQNICL
Trigger: AAGACAGATGTTTTGTGCCAAGTAAGTATCATCCTC...CCTATCAAGTTCTGTTAGGCCTACATCGTGGAATTTTTGTTTTTGAATCAGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000275235.8
CDS CAA 72 bp GTCCCGGAGAGAGATGAGCTTCTTGAGCTGCCTCTCTaGCTCCTGGTTCCCACTTCCTCGAGTCAGAAGACT +
Preference number: 6 (lower is better)
Translates to: VPERDELLELPL*LLVPTSSSQKT
Trigger: AGTCTTCTGACTCGAGGAAGTGGGAACCAGGAGCAAGAGAGGCAGCTCAAGAAGCTCATCTCTCTCCGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367601.8
ENST00000458219.1
ENST00000494282.6
ENST00000629020.2
ENST00000646199.1
CDS TCA 72 bp CGTCAGGAATTTCCAGCTCCCTCCGTAGGTCTGGTGTaGGGGCATTTCGATGGCCTTGTAGTTACACAGGAT +
Preference number: 6 (lower is better)
Translates to: RQEFPAPSVGLV*GHFDGLVVTQD
Trigger: ATCCTGTGTAACTACAAGGCCATCGAAATGCCCTCACACCAGACCTACGGAGGGAGCTGGAAATTCCTGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367596.5
ENST00000367601.8
ENST00000447498.5
ENST00000494282.6
ENST00000629020.2
ENST00000646199.1
CDS GCA 72 bp CTGGGCCAATGTGTTCCAGGAAAGGGTACACCCACATaGCAGTTACATGATGCACCCAGCACACCCATAATA +
Preference number: 6 (lower is better)
Translates to: LGQCVPGKGTPT*QLHDAPSTPII
Trigger: TATTATGGGTGTGCTGGGTGCATCATGTAACTGGCATGTGGGTGTACCCTTTCCTGGAACACATTGGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367601.8
ENST00000458219.1
ENST00000646199.1
CDS CCA 72 bp GATGGTTGTAGACCCAAAGAAGATGATTCTGGCTCCTaGGCCAATGTGTTCCAGGAAAGGGTACACCCACAT +
Preference number: 6 (lower is better)
Translates to: DGCRPKEDDSGS*ANVFQERVHPH
Trigger: ATGTGGGTGTACCCTTTCCTGGAACACATTGGCCCAGGAGCCAGAATCATCTTCTTTGGGTCTACAACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000458219.1
ENST00000646199.1
CDS TCA 72 bp CATATGGCGGTAAGTCCGCTGCTCCTGCTGGGATACTaGTGGTGCGATGTCCTCATCTCGATTAATATAAAG +
Preference number: 6 (lower is better)
Translates to: HMAVSPLLLLGY*WCDVLISINIK
Trigger: CTTTATATTAATCGAGATGAGGACATCGCACCATCAGTATCCCAGCAGGAGCAGCGGACTTACCGCCATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367601.8
ENST00000447498.5
ENST00000458219.1
ENST00000646199.1
CDS TCA 72 bp GGAAATGAAGTGGCCCTTTTTAGGTTAAACATTCCGTaGTTCAGCCACCCTGGGATAAAATTATCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: GNEVALFRLNIP*FSHPGIKLSSS
Trigger: GCTGCTGGATAATTTTATCCCAGGGTGGCTGAATCACGGAATGTTTAACCTAAAAAGGGCCACTTCATTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470265.1
CDS GCA 72 bp CATCTCTCTGTCATAGGCATAAATGATCCAGAACACTaGTACAACAAAAACCCCAACAGGAAAGGCCAACAC +
Preference number: 6 (lower is better)
Translates to: HLSVIGINDPEH*YNKNPNRKGQH
Trigger: GTGTTGGCCTTTCCTGTTGGGGTTTTTGTTGTAGCAGTGTTCTGGATCATTTATGCCTATGACAGAGAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000275235.8
ENST00000357847.9
ENST00000367601.8
ENST00000458219.1
ENST00000494282.6
ENST00000629020.2
ENST00000646199.1
CDS CCA 72 bp GATCATACTGTAGTTCTGTGTAAAAGCCCAAAGTGGTaGAATCTAGTTGCTATAGCATTCCGTGATTCAGCC +
Preference number: 6 (lower is better)
Translates to: DHTVVLCKSPKW*NLVAIAFRDSA
Trigger: GGCTGAATCACGGAATGCTATAGCAACTAGATTCCACCACTTTGGGCTTTTACACAGAACTACAGTATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS TCA 72 bp GCTTCGGGTATATCATCTCTCTGTCATAGGCATAAATaGTCCAGAACACTGCTACAACAAACTGGAAGGAAA +
Preference number: 6 (lower is better)
Translates to: ASGISSLCHRHK*SRTLLQQTGRK
Trigger: TTTCCTTCCAGTTTGTTGTAGCAGTGTTCTGGATCATTTATGCCTATGACAGAGAGATGATATACCCGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470265.1
CDS CCA 72 bp GCTGATCATACTGTAGTTCTGTGTAAAAGCCCAAAGTaGTGGAATCTAGTTGCTATAGCATTCCGTGATTCA +
Preference number: 6 (lower is better)
Translates to: ADHTVVLCKSPK*WNLVAIAFRDS
Trigger: TGAATCACGGAATGCTATAGCAACTAGATTCCACCACTTTGGGCTTTTACACAGAACTACAGTATGATCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000629020.2
CDS GCA 72 bp CATCTCTCTGTCATAGGCATAAATGATCCAGAACACTaGTACAACAAACAGATCAATGAACGTCAGGAATTT +
Preference number: 6 (lower is better)
Translates to: HLSVIGINDPEH*YNKQINERQEF
Trigger: AAATTCCTGACGTTCATTGATCTGTTTGTTGTAGCAGTGTTCTGGATCATTTATGCCTATGACAGAGAGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000447498.5