RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AHRR (Homo sapiens)

Ensembl gene IDs: ENSG00000063438

Ensembl transcript IDs: ENST00000316418.10, ENST00000504625.1, ENST00000506456.1, ENST00000507048.1, ENST00000510400.5, ENST00000510910.1, ENST00000511487.1, ENST00000514523.1, ENST00000515206.6, ENST00000652417.2, ENST00000684583.1

Found 925 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCACTCCCAGTGGAGCTGACGTCAGGGCGCCGATGCCCTCTCCCTaGGGATGGGGCCTTCCCACCCCCGCACAGGTGGGCCCAGCTGCA +
Preference number: 1 (lower is better)
Translates to: ATPSGADVRAPMPSP*GWGLPTPAQVGPAA
Trigger: TGCAGCTGGGCCCACCTGTGCGGGGGTGGGAAGGCCCCATCCTCAGGGAGAGGGCATCGGCGCCCTGACGTCAGCTCCACTGGGAGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp CACAGCCAGGGAGCGCCCTGGCCCACACCCTCAGGCAGGATACAGTaGGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGCCCCACTGGC +
Preference number: 1 (lower is better)
Translates to: HSQGAPWPTPSGRIQ*AVHAQGVFLSSPTG
Trigger: GCCAGTGGGGCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGGTGTGGGCCAGGGCGCTCCCTGGCTGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 90 bp ACCAGGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTaGAGGGCAGGACGTGGTGAAGAAGCCTCCTGGGCAGGGGCTGCC +
Preference number: 1 (lower is better)
Translates to: TRRALGRGASKGLGG*RAGRGEEASWAGAA
Trigger: GGCAGCCCCTGCCCAGGAGGCTTCTTCACCACGTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp GCCTCAGACTCTGTCATGGCGCCATGGAGCACCTGCCGCACGGTGTaGGGCAGTGTGGGACCCACGCTGCCAGCCTCTGCTGCCTGGAAC +
Preference number: 1 (lower is better)
Translates to: ASDSVMAPWSTCRTV*GSVGPTLPASAAWN
Trigger: GTTCCAGGCAGCAGAGGCTGGCAGCGTGGGTCCCACACTGCCCCACACCGTGCGGCAGGTGCTCCATGGCGCCATGACAGAGTCTGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp CCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTaGGCAGCCCCACTGGCCTCTCCTACTGCGGAAGAGGGCACCGAG +
Preference number: 1 (lower is better)
Translates to: PQAGYSARCTPRESS*AAPLASPTAEEGTE
Trigger: CTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 90 bp AGTCCAGGTCTGGCCTCAGACTCTGTCATGGCGCCATGGAGCACCTaGCGCACGGTGTGGGGCAGTGTGGGACCCACGCTGCCAGCCTCT +
Preference number: 1 (lower is better)
Translates to: SPGLASDSVMAPWST*RTVWGSVGPTLPAS
Trigger: AGAGGCTGGCAGCGTGGGTCCCACACTGCCCCACACCGTGCGGCAGGTGCTCCATGGCGCCATGACAGAGTCTGAGGCCAGACCTGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp CCTCAGGTGCCTGGTCTTCACAGGTGCCTGCTCTCCACAGGTGACTaGCCCTCAGGTGGCTGGTCACCCCATGGCTGGCCCCTGGGTAGC +
Preference number: 1 (lower is better)
Translates to: PQVPGLHRCLLSTGD*PSGGWSPHGWPLGS
Trigger: GCTACCCAGGGGCCAGCCATGGGGTGACCAGCCACCTGAGGGTCAGTCACCTGTGGAGAGCAGGCACCTGTGAAGACCAGGCACCTGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp CAGTCCTCAGGTGCCTGGTCTTCACAGGTGCCTGCTCTCCACAGGTaGCTGACCCTCAGGTGGCTGGTCACCCCATGGCTGGCCCCTGGG +
Preference number: 1 (lower is better)
Translates to: QSSGAWSSQVPALHR*LTLRWLVTPWLAPG
Trigger: CCCAGGGGCCAGCCATGGGGTGACCAGCCACCTGAGGGTCAGTCACCTGTGGAGAGCAGGCACCTGTGAAGACCAGGCACCTGAGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp CACGCCCAGGGAGTCTTCCTGAGCAGCCCCACTGGCCTCTCCTACTaGGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCTGCCCTCTAC +
Preference number: 1 (lower is better)
Translates to: HAQGVFLSSPTGLSY*GRGHRALTESSALY
Trigger: GTAGAGGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGGAAGACTCCCTGGGCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp CACCTGTCACCAGGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTaGGAGGCTGCAGGGCAGGACGTGGTGAAGAAGCCTCCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: HLSPGGPWAGAHLKV*EAAGQDVVKKPPGQ
Trigger: CTGCCCAGGAGGCTTCTTCACCACGTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp GTCAATTCCAGTCCAGGTCTGGCCTCAGACTCTGTCATGGCGCCATaGAGCACCTGCCGCACGGTGTGGGGCAGTGTGGGACCCACGCTG +
Preference number: 1 (lower is better)
Translates to: VNSSPGLASDSVMAP*STCRTVWGSVGPTL
Trigger: CAGCGTGGGTCCCACACTGCCCCACACCGTGCGGCAGGTGCTCCATGGCGCCATGACAGAGTCTGAGGCCAGACCTGGACTGGAATTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp GCAGCAACCCACCACTCAATCTGGCACCTGTCACCAGGAGGGCCTTaGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGAC +
Preference number: 1 (lower is better)
Translates to: AATHHSIWHLSPGGP*AGAHLKVWEAAGQD
Trigger: GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGGTGCCAGATTGAGTGGTGGGTTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp CCCCACTGGCCTCTCCTACTGCGGAAGAGGGCACCGAGCCCTCACTaGGTCCTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTT +
Preference number: 1 (lower is better)
Translates to: PHWPLLLRKRAPSPH*VLCPLPTGMDAASL
Trigger: AAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 90 bp CTGCCGCACGGTGTGGGGCAGTGTGGGACCCACGCTGCCAGCCTCTaGTGCCTGGAACGTTCTAGATTCCTCTATGAGTGGGCTCACGGA +
Preference number: 1 (lower is better)
Translates to: LPHGVGQCGTHAASL*CLERSRFLYEWAHG
Trigger: TCCGTGAGCCCACTCATAGAGGAATCTAGAACGTTCCAGGCAGCAGAGGCTGGCAGCGTGGGTCCCACACTGCCCCACACCGTGCGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp CAACACCCACGTGCTGAGTGCAGCGTCAACACAGCGTGGCCTGCCTaGCAGCAACCCACCACTCAATCTGGCACCTGTCACCAGGAGGGC +
Preference number: 1 (lower is better)
Translates to: QHPRAECSVNTAWPA*QQPTTQSGTCHQEG
Trigger: GCCCTCCTGGTGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTGACGCTGCACTCAGCACGTGGGTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp CGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGTCAACACAGCGTaGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCAC +
Preference number: 1 (lower is better)
Translates to: RQSQHPRAECSVNTA*PAWQQPTTQSGTCH
Trigger: GTGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTGACGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp CAGATGCAGACCGAACTGAGTACGTCTCAGGGCCTGGGTGTCCAATaGTCGGGGCCTCCTGAACGACATGGGCCTTCGTTCGCCCGTGTG +
Preference number: 1 (lower is better)
Translates to: QMQTELSTSQGLGVQ*SGPPERHGPSFARV
Trigger: CACACGGGCGAACGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCATTGGACACCCAGGCCCTGAGACGTACTCAGTTCGGTCTGCATCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR TCA 90 bp ACTGCCTGGCTTCCTCTTGCTTGGGGTGACTTCTACACCCTGATCTaGTGCCTGCACCAGCCGGGTGGGGTTCCAGGCCAGACCGTGGAA +
Preference number: 1 (lower is better)
Translates to: TAWLPLAWGDFYTLI*CLHQPGGVPGQTVE
Trigger: TTCCACGGTCTGGCCTGGAACCCCACCCGGCTGGTGCAGGCATCAGATCAGGGTGTAGAAGTCACCCCAAGCAAGAGGAAGCCAGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp ATCAGGAGCATTCAGGCAGGTGACAAAGACTCAGAGCGAAGCAAGTaGCACAGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTC +
Preference number: 1 (lower is better)
Translates to: IRSIQAGDKDSERSK*HRGSPGSCSGRPQL
Trigger: GAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCTGTGTCACTTGCTTCGCTCTGAGTCTTTGTCACCTGCCTGAATGCTCCTGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 90 bp CTGCACCAGCCGGGTGGGGTTCCAGGCCAGACCGTGGAAGAAGCCTaGAATGCACCATCAGCTGTAGGTTCTCGGGTTGGTGGATTGGTG +
Preference number: 1 (lower is better)
Translates to: LHQPGGVPGQTVEEA*NAPSAVGSRVGGLV
Trigger: CACCAATCCACCAACCCGAGAACCTACAGCTGATGGTGCATTTCAGGCTTCTTCCACGGTCTGGCCTGGAACCCCACCCGGCTGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp GCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTaGGCTCCCTGCCCTCCTCGGCCCCGAGACTGGAAGAGCAGCTGC +
Preference number: 1 (lower is better)
Translates to: APGHSRHVIHKTLSH*APCPPRPRDWKSSC
Trigger: GCAGCTGCTCTTCCAGTCTCGGGGCCGAGGAGGGCAGGGAGCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp ATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATaGACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCTG +
Preference number: 1 (lower is better)
Translates to: IGSCVCCTHTLADCA*TALQSVCLRTGSGL
Trigger: CAGGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR GCA 90 bp CCAGCCGGGTGGGGTTCCAGGCCAGACCGTGGAAGAAGCCTGAAATaGACCATCAGCTGTAGGTTCTCGGGTTGGTGGATTGGTGACCTT +
Preference number: 1 (lower is better)
Translates to: PAGWGSRPDRGRSLK*TISCRFSGWWIGDL
Trigger: AAGGTCACCAATCCACCAACCCGAGAACCTACAGCTGATGGTGCATTTCAGGCTTCTTCCACGGTCTGGCCTGGAACCCCACCCGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp GTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATaGGCCTCTAACCACTTTCTGAGATCACAGAACCCGGGGGCCTCA +
Preference number: 1 (lower is better)
Translates to: VAAAGSAHAFLWSRE*ASNHFLRSQNPGAS
Trigger: TGAGGCCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp TGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTaGCCTCAGACTCTGTCATGGCGCCATGGAGCACCTGCCGCACGG +
Preference number: 1 (lower is better)
Translates to: CPEGTGVMLSIPVQV*PQTLSWRHGAPAAR
Trigger: CCGTGCGGCAGGTGCTCCATGGCGCCATGACAGAGTCTGAGGCCAGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp GGGCACCGAGCCCTCACTGAGTCCTCTGCCCTCTACCCACAGGTATaGATGCTGCCTCGCTTGTCAACTTTCACATCAACGAGGAGTGCC +
Preference number: 1 (lower is better)
Translates to: GHRALTESSALYPQV*MLPRLSTFTSTRSA
Trigger: GGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAGGACTCAGTGAGGGCTCGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 90 bp GAGTGGGCTCACGGACCCCTTTCTCCGCGTGTTGTATTTCTAATTTaGCGTGTGCTGGCCTCTACAGTGCACTGTGGCGATGGGCTGACC +
Preference number: 1 (lower is better)
Translates to: EWAHGPLSPRVVFLI*RVLASTVHCGDGLT
Trigger: GGTCAGCCCATCGCCACAGTGCACTGTAGAGGCCAGCACACGGCAAATTAGAAATACAACACGCGGAGAAAGGGGTCCGTGAGCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp AGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGTTCATCTaGAAGGAGCATGTGCCTCAGCCTTGCAAAGCAGGCAAGTCCACC +
Preference number: 1 (lower is better)
Translates to: SRAVLHARLAVGLFI*KEHVPQPCKAGKST
Trigger: GGTGGACTTGCCTGCTTTGCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp CAGTGGAAGGCCATGAGCACGTCTCACACCCACGACAGCACAGCATaGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGCAGAGAGTG +
Preference number: 1 (lower is better)
Translates to: QWKAMSTSHTHDSTA*RSPFERRPLAKQRV
Trigger: CACTCTCTGCTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGTGTGAGACGTGCTCATGGCCTTCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp ACCAGGACTGTGCCCGGAGAGCCCTCAGGTGTCCCAGAAAACAGCTaGTACCAGGTTAGGGGGTTAAGACAGAATGCCCAGGAAGAGGGA +
Preference number: 1 (lower is better)
Translates to: TRTVPGEPSGVPENS*YQVRGLRQNAQEEG
Trigger: TCCCTCTTCCTGGGCATTCTGTCTTAACCCCCTAACCTGGTACCAGCTGTTTTCTGGGACACCTGAGGGCTCTCCGGGCACAGTCCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 90 bp TTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTaGGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCC +
Preference number: 1 (lower is better)
Translates to: FRIGSCVCCTHTLAD*ACTALQSVCLRTGS
Trigger: GGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR CCA 90 bp GCGAAGACTGGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTaGTCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAAC +
Preference number: 1 (lower is better)
Translates to: AKTGVAAAGSAHAFL*SRECASNHFLRSQN
Trigger: GTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCAGTCTTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp GAACCGCAAAGAAATGCACTTCCTCTGAGCCAGCGAAGACTGGGGTaGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAAT +
Preference number: 1 (lower is better)
Translates to: EPQRNALPLSQRRLG*LQLAVPTRFSGQEN
Trigger: ATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTCTTTGCGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 90 bp AACCAAATATTCAGTGAATCAGCGTGCGGTGCACAGGTGTACAGATaGGTGAGCGGTCAACACTGCAGGCCACTAACCCCACGCGGCCAC +
Preference number: 1 (lower is better)
Translates to: NQIFSESACGAQVYR*VSGQHCRPLTPRGH
Trigger: GTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCACTCATCTGTACACCTGTGCACCGCACGCTGATTCACTGAATATTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 90 bp GCTATCAGTCCTGCAATATTCACCATCAACAGATGCAGACCGAACTaGGTACGTCTCAGGGCCTGGGTGTCCAATGCTCGGGGCCTCCTG +
Preference number: 1 (lower is better)
Translates to: AISPAIFTINRCRPN*VRLRAWVSNARGLL
Trigger: CAGGAGGCCCCGAGCATTGGACACCCAGGCCCTGAGACGTACTCAGTTCGGTCTGCATCTGTTGATGGTGAATATTGCAGGACTGATAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR GCA 90 bp GGGCAAAGAGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTaGTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTG +
Preference number: 1 (lower is better)
Translates to: GQREAASQKGVPASG*WMGECASKTLSYSL
Trigger: CAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCTCTTTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp TGTCCCCATCGTGACTTTAGGCATCAGATAAGGGAGAGATGGCAGTaGAAGGCCATGAGCACGTCTCACACCCACGACAGCACAGCATGG +
Preference number: 1 (lower is better)
Translates to: CPHRDFRHQIRERWQ*KAMSTSHTHDSTAW
Trigger: CCATGCTGTGCTGTCGTGGGTGTGAGACGTGCTCATGGCCTTCCACTGCCATCTCTCCCTTATCTGATGCCTAAAGTCACGATGGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp ACACTGAAGGGCCTGGCTACAATCGCAAACACGCAGCCACGTCTCTaGTTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCCGTT +
Preference number: 1 (lower is better)
Translates to: TLKGLATIANTQPRL*FDLWGLVFFPVTAV
Trigger: AACGGCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGCGTGTTTGCGATTGTAGCCAGGCCCTTCAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp AGACCCACTGAGAACTCGGGAGATGTCCAGAAGGAACAGGGGTTATaGTGTCAATTCCAGTCCAGGTCTGGCCTCAGACTCTGTCATGGC +
Preference number: 1 (lower is better)
Translates to: RPTENSGDVQKEQGL*CQFQSRSGLRLCHG
Trigger: GCCATGACAGAGTCTGAGGCCAGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGAGTTCTCAGTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp ACATGGGCGGGTGTATTAACAGAGTGTGAGGGAATGCATTCGAGGTaGTCACTGAGGGCAAAGAGAAGCAGCAAGTCAGAAGGGGGTCCC +
Preference number: 1 (lower is better)
Translates to: TWAGVLTECEGMHSR*SLRAKRSSKSEGGP
Trigger: GGGACCCCCTTCTGACTTGCTGCTTCTCTTTGCCCTCAGTGAGCACCTCGAATGCATTCCCTCACACTCTGTTAATACACCCGCCCATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp GCGGTCACCAGAGTCACACGCTCGTCCTGCAGAGGAAACACACCCTaGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAAAATA +
Preference number: 1 (lower is better)
Translates to: AVTRVTRSSCRGNTP*PWNPTLSWKMQPKI
Trigger: TATTTTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGACTCTGGTGACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp CAAAGAGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTaGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTGTGG +
Preference number: 1 (lower is better)
Translates to: QREAASQKGVPASGC*MGECASKTLSYSLW
Trigger: CCACAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp GCTGCCAGCCTCTGCTGCCTGGAACGTTCTAGATTCCTCTATGAGTaGGCTCACGGACCCCTTTCTCCGCGTGTTGTATTTCTAATTTGC +
Preference number: 1 (lower is better)
Translates to: AASLCCLERSRFLYE*AHGPLSPRVVFLIC
Trigger: GCAAATTAGAAATACAACACGCGGAGAAAGGGGTCCGTGAGCCCACTCATAGAGGAATCTAGAACGTTCCAGGCAGCAGAGGCTGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp GTCATAGGGGGCCACGATGGATCTGTGACTCTGGGCTCAGATGGTTaGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTATCC +
Preference number: 1 (lower is better)
Translates to: VIGGHDGSVTLGSDG*LFSSSTERRSLSLS
Trigger: GGATAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCCCAGAGTCACAGATCCATCGTGGCCCCCTATGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp TCCCTAATTATTCTCCTAGGATGGCAATGGGAACCCTCATTTGAGTaGACTGTACAGCCAGCCAGAGAGAAACCCCCACAGGCAGCGCAG +
Preference number: 1 (lower is better)
Translates to: SLIILLGWQWEPSFE*TVQPAREKPPQAAQ
Trigger: CTGCGCTGCCTGTGGGGGTTTCTCTCTGGCTGGCTGTACAGTTCACTCAAATGAGGGTTCCCATTGCCATCCTAGGAGAATAATTAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp ATCTGTGACTCTGGGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTaGGAGGAGATCCTTATCCCTATCCCTGCCACATGGGGGCAAACT +
Preference number: 1 (lower is better)
Translates to: ICDSGLRWLAVLFQY*EEILIPIPATWGQT
Trigger: AGTTTGCCCCCATGTGGCAGGGATAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCCCAGAGTCACAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp AGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTaGCAGCCGTTGGCTCCAGGACACTCAAGACATGTGATACACAAG +
Preference number: 1 (lower is better)
Translates to: SHVSDSIFGAWCFSQ*QPLAPGHSRHVIHK
Trigger: CTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAACGGCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp ACCAGAGTCACACGCTCGTCCTGCAGAGGAAACACACCCTGGCCTTaGAACCCCACGTTATCGTGGAAGATGCAACCAAAAATAGCTCTT +
Preference number: 1 (lower is better)
Translates to: TRVTRSSCRGNTPWP*NPTLSWKMQPKIAL
Trigger: AAGAGCTATTTTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGACTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 90 bp CTTGTCCCTAATTATTCTCCTAGGATGGCAATGGGAACCCTCATTTaGGTGAACTGTACAGCCAGCCAGAGAGAAACCCCCACAGGCAGC +
Preference number: 1 (lower is better)
Translates to: LVPNYSPRMAMGTLI*VNCTASQRETPTGS
Trigger: GCTGCCTGTGGGGGTTTCTCTCTGGCTGGCTGTACAGTTCACTCAAATGAGGGTTCCCATTGCCATCCTAGGAGAATAATTAGGGACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp GCACCAGAGAGCTTCAGAGATTTCACACTTCCTCACAGTGCAAAATaGACCGCAAAGAAATGCACTTCCTCTGAGCCAGCGAAGACTGGG +
Preference number: 1 (lower is better)
Translates to: APESFRDFTLPHSAK*TAKKCTSSEPAKTG
Trigger: CCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTGAAATCTCTGAAGCTCTCTGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 90 bp TTTCTCTGTACTTCCAAACCCGGAGTCTGTGAACTCTGTATTACGTaGTGTACCAAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCC +
Preference number: 1 (lower is better)
Translates to: FLCTSKPGVCELCIT*CTKRQIRKNRPQRP
Trigger: GGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTTGGTACATCACGTAATACAGAGTTCACAGACTCCGGGTTTGGAAGTACAGAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp CTGTTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTaGACACACACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGC +
Preference number: 1 (lower is better)
Translates to: LLGYFTKFRIGSCVC*THTLADCACTALQS
Trigger: GCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR GCA 90 bp CTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATaGACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTAGAGGA +
Preference number: 1 (lower is better)
Translates to: LTTQLLSEQVCSAPG*TEFVPASAQERFRG
Trigger: TCCTCTAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 90 bp CATTGTCCTCACACATCACTACAGGCGGTCAGTGGCTATCAGTCCTaGAATATTCACCATCAACAGATGCAGACCGAACTGAGTACGTCT +
Preference number: 1 (lower is better)
Translates to: HCPHTSLQAVSGYQS*NIHHQQMQTELSTS
Trigger: AGACGTACTCAGTTCGGTCTGCATCTGTTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTGAGGACAATG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR GCA 90 bp GAACTGTTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATaGTGCACACACACACTAGCAGACTGCGCATGCACAGCTCTGCAA +
Preference number: 1 (lower is better)
Translates to: ELLGYFTKFRIGSCV*CTHTLADCACTALQ
Trigger: TTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAACAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR CCA 90 bp CGTGGAAGAAGCCTGAAATGCACCATCAGCTGTAGGTTCTCGGGTTaGTGGATTGGTGACCTTCACTTTCTGACTTATGCTTTTGTATCC +
Preference number: 1 (lower is better)
Translates to: RGRSLKCTISCRFSG*WIGDLHFLTYAFVS
Trigger: GGATACAAAAGCATAAGTCAGAAAGTGAAGGTCACCAATCCACCAACCCGAGAACCTACAGCTGATGGTGCATTTCAGGCTTCTTCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 90 bp CAAATGGTATTTGCAAAGGAAACTTCTCACCACCCAGTTACTTTCTaGACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGC +
Preference number: 1 (lower is better)
Translates to: QMVFAKETSHHPVTF*TGVFCTRMHRICPS
Trigger: GCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTTCCTTTGCAAATACCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp GGAAGAAGCCTGAAATGCACCATCAGCTGTAGGTTCTCGGGTTGGTaGATTGGTGACCTTCACTTTCTGACTTATGCTTTTGTATCCAAA +
Preference number: 1 (lower is better)
Translates to: GRSLKCTISCRFSGW*IGDLHFLTYAFVSK
Trigger: TTTGGATACAAAAGCATAAGTCAGAAAGTGAAGGTCACCAATCCACCAACCCGAGAACCTACAGCTGATGGTGCATTTCAGGCTTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 90 bp GGTATGGATGCTGCCTCGCTTGTCAACTTTCACATCAACGAGGAGTaGCAGCTCAGCTGTCAGAGTCTCCATTTGTTTATAAATAATGAA +
Preference number: 1 (lower is better)
Translates to: GMDAASLVNFHINEE*QLSCQSLHLFINNE
Trigger: TTCATTATTTATAAACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCATACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 90 bp GGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTaGGACTTTTTCAGGGATACAGCAGATCTGATTTTTAATTATTTT +
Preference number: 1 (lower is better)
Translates to: GPQNRELQEWNMHVD*DFFRDTADLIFNYF
Trigger: AAAATAATTAAAAATCAGATCTGCTGTATCCCTGAAAAAGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 90 bp AATTTATTATGTTATGTAACCATGAATTTACAACTAACACCCATATaGGGCTGGCCTGCCTGTGAATCACCATTGCCTTCATTGTCCTCA +
Preference number: 1 (lower is better)
Translates to: NLLCYVTMNLQLTPI*GWPACESPLPSLSS
Trigger: TGAGGACAATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTGTAAATTCATGGTTACATAACATAATAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 90 bp CATTCCGGAAGAAAATGTCATTTAGTGATTCTTGATGGCCACAAATaGTATTTGCAAAGGAAACTTCTCACCACCCAGTTACTTTCTGAA +
Preference number: 1 (lower is better)
Translates to: HSGRKCHLVILDGHK*YLQRKLLTTQLLSE
Trigger: TTCAGAAAGTAACTGGGTGGTGAGAAGTTTCCTTTGCAAATACCATTTGTGGCCATCAAGAATCACTAAATGACATTTTCTTCCGGAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 90 bp ATTGTAATATGTACATTCCGGAAGAAAATGTCATTTAGTGATTCTTaGTGGCCACAAATGGTATTTGCAAAGGAAACTTCTCACCACCCA +
Preference number: 1 (lower is better)
Translates to: IVICTFRKKMSFSDS*WPQMVFAKETSHHP
Trigger: TGGGTGGTGAGAAGTTTCCTTTGCAAATACCATTTGTGGCCATCAAGAATCACTAAATGACATTTTCTTCCGGAATGTACATATTACAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp CGATGCCCTCTCCCTGAGGATGGGGCCTTCCCACCCCCGCACAGGTGGGCCCAGGGGACGGGTGCTCGCTaGCTCTGGGGCATGAAGCTG +
Preference number: 2 (lower is better)
Translates to: RCPLPEDGAFPPPHRWAQGTGAR*LWGMKL
Trigger: CAGCTTCATGCCCCAGAGGCAGCGAGCACCCGTCCC...CTGGGCCCACCTGTGCGGGGGTGGGAAGGCCCCATCCTCAGGGAGAGGGCATCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp CCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTGGGGGTCCCAGCAAGTaGGTGCTGGATGGGCGAGTG +
Preference number: 2 (lower is better)
Translates to: PGSCSGRPQLLSRAVLHAGGPSK*VLDGRV
Trigger: CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCC...AGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp GTGACACAGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGTGCCCCTTCAGGCTGTaGGCAGGAGGGGACCAGGAC +
Preference number: 2 (lower is better)
Translates to: VTQREPGLVQREASAPESCPFRL*AGGDQD
Trigger: GTCCTGGTCCCCTCCTGCCCACAGCCTGAAGGGGCA...CGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCTGTGTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp TCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCAGGGAGCGCCCTGGCCTCAGGCAGGATACAGTaGGCGGTGCACGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: STLQATNPTRPQPGSALASGRIQ*AVHAQG
Trigger: TCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGA...GGCCAGGGCGCTCCCTGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp CCTGGCCCACACCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTGGCCTGGGTGTCCAATaGTCGGGGCCTCCTGAACGA +
Preference number: 2 (lower is better)
Translates to: PGPHPQAGYSARCTPRESGLGVQ*SGPPER
Trigger: TCGTTCAGGAGGCCCCGAGCATTGGACACCCAGGCC...AGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGGTGTGGGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR-3UTR GCA 90 bp CCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGCGGATACAGTGCGCGGTaGACGCCCAGGGAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: PSGRIQCAVHAQGVFLSSGYSAR*TPRESS
Trigger: GGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCC...GCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 90 bp GGCAGCAACCCACCACTCAATCTGGCACCTGTCACCAGGAGGGCCTaGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGA +
Preference number: 2 (lower is better)
Translates to: GSNPPLNLAPVTRRA*GRGASKGLGGCRAG
Trigger: TCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp TCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCAGGGAGCGCCCTGGCCGGGCTGGCCTGCCTGTaGATCACCATTGCCTTCATT +
Preference number: 2 (lower is better)
Translates to: STLQATNPTRPQPGSALAGLACL*ITIAFI
Trigger: AATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCC...GGCCAGGGCGCTCCCTGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp CAGATGAGTGAGCGGTCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCAGCACCGAGCCCTCACTaGGTCCTCTGCCCTCTACCC +
Preference number: 2 (lower is better)
Translates to: QMSERSTLQATNPTRPQPAPSPH*VLCPLP
Trigger: GGGTAGAGGGCAGAGGACTCAGTGAGGGCTCGGTGC...TGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCACTCATCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp AGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATCCTCTAACCACTTTCTaGGATCACAGAACCCGGGGG +
Preference number: 2 (lower is better)
Translates to: SPGSCSGRPQLLSRAVLHPLTTF*DHRTRG
Trigger: CCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGG...ATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp AGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATAGTGTGAGAAGCGGATaGCTGTGCCGTGCTGCTCTT +
Preference number: 2 (lower is better)
Translates to: SPGSCSGRPQLLSRAVLHSVRSG*LCRAAL
Trigger: AAGAGCAGCACGGCACAGTCATCCGCTTCTCACACT...ATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp CCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGCATGCTCGGGGCCTCCTaGACGACATGGGCCTTCGTT +
Preference number: 2 (lower is better)
Translates to: PSGRIQCAVHAQGVFLSSMLGAS*TTWAFV
Trigger: AACGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCAT...GCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR-3UTR CCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGTGGACTTGGCAGCCATaGGACGGGTGCTCGCTGCCT +
Preference number: 2 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGWTWQP*DGCSLP
Trigger: AGGCAGCGAGCACCCGTCCCATGGCTGCCAAGTCCA...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp CAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCACCCAGGGAGTCTTCCTaGGCAGCCCCACTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: QVRRGSQQVGAGWASVLPPRESS*AAPLAS
Trigger: AGAGGCCAGTGGGGCTGCTCAGGAAGACTCCCTGGG...TGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp GGCCTCTCCTACTGCGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCTGCCCTCAGATGCAGACCGAACTaGGTACGTCTCAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GLSYCGRGHRALTESSALRCRPN*VRLRAW
Trigger: CCAGGCCCTGAGACGTACTCAGTTCGGTCTGCATCT...GAGGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR-3UTR CCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGACAGCGTGGCCTGCCTaGCAGCAACCCACCACTCAA +
Preference number: 2 (lower is better)
Translates to: GSPHHKTGRANTHVLSAATAWPA*QQPTTQ
Trigger: TTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGT...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp CCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCCACAGGTATGGATGCTaGCTCGCTTGTCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: PGLVQREASAPESGCAACHRYGC*LACQLS
Trigger: TGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTG...GCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGTGAGCGGTCAACACTaGAGGCCACTAACCCCACGC +
Preference number: 2 (lower is better)
Translates to: EASAPESGCAACSPSCRSVSGQH*RPLTPR
Trigger: GCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCAC...AGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCAGTGCGGCGGGGTGGTaGGTCCCTAGGGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSSAAGW*VPRGGG
Trigger: CCCACCACCCCTAGGGACCCACCACCCCGCCGCACT...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGCAGTCCTCAGGTGCCTaGTCTTCACAGGTGCCTGCT +
Preference number: 2 (lower is better)
Translates to: GSPHHKTGRANTHVLSAAQSSGA*SSQVPA
Trigger: AGCAGGCACCTGTGAAGACCAGGCACCTGAGGACTG...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGACCCACCACTCAATCTaGCACCTGTCACCAGGAGGG +
Preference number: 2 (lower is better)
Translates to: GSPHHKTGRANTHVLSAATHHSI*HLSPGG
Trigger: CCCTCCTGGTGACAGGTGCCAGATTGAGTGGTGGGT...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp CCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGTTCTGGGGTGGCTGCAGCTaGCAGTGCCCACGCGTTTCT +
Preference number: 2 (lower is better)
Translates to: PQLLSRAVLHARLAVGLFWGGCS*QCPRVS
Trigger: AGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCA...GAACAGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACTCAGGAGCTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp GAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGTGCCGTGCTGCTCTTaGCACATGGGCGGGTGTATT +
Preference number: 2 (lower is better)
Translates to: EASAPESGCAACSPSCRSVPCCS*HMGGCI
Trigger: AATACACCCGCCCATGTGTCAAGAGCAGCACGGCAC...AGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp CCTGTCACCAGGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCGACTCTGGGCTCAGATaGTTGGCTGTTCTCTTCCAG +
Preference number: 2 (lower is better)
Translates to: PVTRRALGRGASKGLGGCDSGLR*LAVLFQ
Trigger: CTGGAAGAGAACAGCCAACCATCTGAGCCCAGAGTC...GCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp CCTGTCACCAGGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCCAGATAAGGGAGAGATaGCAGTGGAAGGCCATGAGC +
Preference number: 2 (lower is better)
Translates to: PVTRRALGRGASKGLGGCQIRER*QWKAMS
Trigger: GCTCATGGCCTTCCACTGCCATCTCTCCCTTATCTG...GCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp CAGAGCGAAGCAAGTGACACAGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCGCTGCTCTTGACACATaGGCGGGTGTATTAACAGAG +
Preference number: 2 (lower is better)
Translates to: QSEASDTEGARARAAGGLAALDT*AGVLTE
Trigger: CTCTGTTAATACACCCGCCCATGTGTCAAGAGCAGC...GAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCTGTGTCACTTGCTTCGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGTCCTCTTGCTTGGGGTaGCTTCTACACCCTGATCTG +
Preference number: 2 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGSSCLG*LLHPDL
Trigger: CAGATCAGGGTGTAGAAGTCACCCCAAGCAAGAGGA...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp GTGACACAGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGTGTATTAACAGAGTGTaGGGGAATGCATTCGAGGTG +
Preference number: 2 (lower is better)
Translates to: VTQREPGLVQREASAPESCINRV*GNAFEV
Trigger: CACCTCGAATGCATTCCCTCACACTCTGTTAATACA...CGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCTGTGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp CTGCATGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGGGAGGCCTCAGCTCCTaGGTCGGGCTGTGCTGCATG +
Preference number: 2 (lower is better)
Translates to: LHARLAVGLFICKEHVPQGGLSS*VGLCCM
Trigger: CATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCC...CTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCACGTCAGGGCGCCGATaGCCTCTCCCTGAGGATGGG +
Preference number: 2 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSTSGRR*PLPEDG
Trigger: CCCATCCTCAGGGAGAGGGCATCGGCGCCCTGACGT...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp CAAAATGAACCGCAAAGAAATGCACTTCCTCTGAGCCAGCGAAGACTGGGGTGGAGCCAGGGAGCGCCCTaGCCCACACCCTCAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QNEPQRNALPLSQRRLGWSQGAP*PTPSGR
Trigger: CCTGCCTGAGGGTGTGGGCCAGGGCGCTCCCTGGCT...CCACCCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTCTTTGCGGTTCATTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGGAACCCTCATTTGAGTaGACTGTACAGCCAGCCAGA +
Preference number: 2 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGEPSFE*TVQPAR
Trigger: TCTGGCTGGCTGTACAGTTCACTCAAATGAGGGTTC...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp CAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAGAAATGCACTTCCTCTaGGCCAGCGAAGACTGGGGT +
Preference number: 2 (lower is better)
Translates to: QVRRGSQQVGAGWASVLPEMHFL*ASEDWG
Trigger: ACCCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTC...TGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp AGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATAAACCCAAAACACTGTaGTGGTGCTGTTTAACAACC +
Preference number: 2 (lower is better)
Translates to: SPGSCSGRPQLLSRAVLHKPKTL*WCCLTT
Trigger: GGTTGTTAAACAGCACCAGCACAGTGTTTTGGGTTT...ATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp TGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGGGCTGCAGCTGGCAGTaGCCACGCGTTTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: CSPSCRSVHLQGACASALGCSWQ*PRVSLV
Trigger: GACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCC...CAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GTGACACAGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGCACACTTCCTCACAGTaGAAAATGAACCGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: VTQREPGLVQREASAPESHTSSQ*KMNRKE
Trigger: TTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTG...CGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCTGTGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp AGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATCCCCAAGACACATACTaGATCAAGTTGCTGAATTTC +
Preference number: 2 (lower is better)
Translates to: SPGSCSGRPQLLSRAVLHPQDTY*IKLLNF
Trigger: GAAATTCAGCAACTTGATGCAGTATGTGTCTTGGGG...ATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGAGATTCCTCTATGAGTaGGCTCACGGACCCCTTTCT +
Preference number: 2 (lower is better)
Translates to: GSPHHKTGRANTHVLSAARFLYE*AHGPLS
Trigger: AGAAAGGGGTCCGTGAGCCCACTCATAGAGGAATCT...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTACCTGCCGCACGGTGTaGGGCAGTGTGGGACCCACG +
Preference number: 2 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSTCRTV*GSVGPT
Trigger: CGTGGGTCCCACACTGCCCCACACCGTGCGGCAGGT...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp AGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGAACACACCCTGGCCTTaGAACCCCACGTTATCGTGG +
Preference number: 2 (lower is better)
Translates to: RSSKSEGGPSKWVLDGRVNTPWP*NPTLSW
Trigger: CCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTT...CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp CTGTGCCGTGCTGCTCTTGACACATGGGCGGGTGTATTAACAGAGTGTGAGGGAGTACGTCTCAGGGCCTaGGTGTCCAATGCTCGGGGC +
Preference number: 2 (lower is better)
Translates to: LCRAALDTWAGVLTECEGVRLRA*VSNARG
Trigger: GCCCCGAGCATTGGACACCCAGGCCCTGAGACGTAC...TCCCTCACACTCTGTTAATACACCCGCCCATGTGTCAAGAGCAGCACGGCACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGCAAACCCGGAGTCTGTaGACTCTGTATTACGTGATG +
Preference number: 2 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGQTRSL*TLYYVM
Trigger: CATCACGTAATACAGAGTTCACAGACTCCGGGTTTG...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGGGGTTGGTGGATTGGTaGCCTTCACTTTCTGACTTA +
Preference number: 2 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGGLVDW*PSLSDL
Trigger: TAAGTCAGAAAGTGAAGGTCACCAATCCACCAACCC...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGCATCTAAGTAAGCACTaGCACCTCAAAGCCACTGAC +
Preference number: 2 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGHLSKH*HLKATD
Trigger: GTCAGTGGCTTTGAGGTGTCAGTGCTTACTTAGATG...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp CAAAATGAACCGCAAAGAAATGCACTTCCTCTGAGCCAGCGAAGACTGGGGTGGCCCAGGGAGTCTTCCTaGGCAGCCCCACTGGCCTCT +
Preference number: 2 (lower is better)
Translates to: QNEPQRNALPLSQRRLGWPRESS*AAPLAS
Trigger: AGAGGCCAGTGGGGCTGCTCAGGAAGACTCCCTGGG...CCACCCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTCTTTGCGGTTCATTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTACAGGTGGGCCCAGCTaGAGCCACACCCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: LALRTGNSKSGTCMLIETTGGPS*SHTPGP
Trigger: AGGCCCTGGGGTGTGGCTGCAGCTGGGCCCACCTGT...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp CATGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTGTGAGCGGTCAACACTaGAGGCCACTAACCCCACGC +
Preference number: 2 (lower is better)
Translates to: HARLAVGLFICKEHVPQPVSGQH*RPLTPR
Trigger: GCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCAC...AGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCTCGGGCTGTGCTGCATaGTCGCCTAGCTGTAGGTCT +
Preference number: 2 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCSGCAA*SPSCRS
Trigger: AGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGA...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp TACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTGGGAGCCCGGGCTCGTaGAGCGGGAGGCCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: YFLNRCVLHQDAQNLSQLGSPGS*SGRPQL
Trigger: GAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCC...AAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTCGGTGTGGGGCAGTGTaGGACCCACGCTGCCAGCCT +
Preference number: 2 (lower is better)
Translates to: LALRTGNSKSGTCMLIETRCGAV*DPRCQP
Trigger: AGGCTGGCAGCGTGGGTCCCACACTGCCCCACACCG...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCCCTGCACCAGCCGGGTaGGGTTCCAGGCCAGACCGT +
Preference number: 2 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSPAPAG*GSRPDR
Trigger: ACGGTCTGGCCTGGAACCCCACCCGGCTGGTGCAGG...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTACACAGTGCGGCGGGGTaGTGGGTCCCTAGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLHSAAG*WVPRGG
Trigger: ACCACCCCTAGGGACCCACCACCCCGCCGCACTGTG...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGCATAGGGGGCCACGATaGATCTGTGACTCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: THDSTAWRSPFERRPLAKHRGPR*ICDSGL
Trigger: GAGCCCAGAGTCACAGATCCATCGTGGCCCCCTATG...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp AGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGCAACTAACACCCATATaGGGCTGGCCTGCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: RSSKSEGGPSKWVLDGRVQLTPI*GWPACE
Trigger: TTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTG...CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp TCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACCCGGGGGCCTCACCTGAGCAGCCCCACTaGCCTCTCCTACTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: SRECASNHFLRSQNPGASPEQPH*PLLLRK
Trigger: CTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGG...TGAGGCCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp CCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTAACCCCACGTTATCGTaGAAGATGCAACCAAAAATA +
Preference number: 2 (lower is better)
Translates to: PGSCSGRPQLLSRAVLHANPTLS*KMQPKI
Trigger: TATTTTTGGTTGCATCTTCCACGATAACGTGGGGTT...AGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 90 bp AAACTGTCCAAGAACCAGGCCACTGAGAGGCGCAGGCACCTGGCATaGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGTTTTGACA +
Preference number: 2 (lower is better)
Translates to: KLSKNQATERRRHLA*GRRPSPANQTWVLT
Trigger: TGTCAAAACCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCCTCTCAGTGGCCTGGTTCTTGGACAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CAA 90 bp CCTGGCTACAATCGCAAACACGCAGCCACGTCTCTGATTCGATCTTaGGGGCCTGGTGTTTTTCCCAGTGACAGCCGTTGGCTCCAGGAC +
Preference number: 2 (lower is better)
Translates to: PGYNRKHAATSLIRS*GPGVFPSDSRWLQD
Trigger: GTCCTGGAGCCAACGGCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGCGTGTTTGCGATTGTAGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp CAGATGAGTGAGCGGTCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCACAACCAAATATTCAGTaGATCAGCGTGCGGTGCACA +
Preference number: 2 (lower is better)
Translates to: QMSERSTLQATNPTRPQPQPNIQ*ISVRCT
Trigger: TGTGCACCGCACGCTGATTCACTGAATATTTGGTTG...TGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCACTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACAGAGAAATGCTGTCATaGTTGAATAGACTTAAGGCC +
Preference number: 2 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDREMLS*LNRLKA
Trigger: GGCCTTAAGTCTATTCAAGCATGACAGCATTTCTCT...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTATGGGCTGACCCTGCCTaGACAGCACAGGCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLWADPA*TAQAGS
Trigger: GCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCA...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp AAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGACCCACAGGTATGGATaGTGCCTCGCTTGTCAACTT +
Preference number: 2 (lower is better)
Translates to: KQQVRRGSQQVGAGWASVTHRYG*CLACQL
Trigger: AAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGT...CACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp CACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAAAATAGCACTGGCCTCTCCTACTaGGGAAGAGGGCACCGAGCC +
Preference number: 2 (lower is better)
Translates to: HTLALEPHVIVEDATKNSTGLSY*GRGHRA
Trigger: GGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGT...GCTATTTTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp CAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTGTGGATACAGTGCGCGGTaGACGCCCAGGGAGTCTTCC +
Preference number: 2 (lower is better)
Translates to: QVGAGWASVLPKPLVTACGYSAR*TPRESS
Trigger: GGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCC...ACAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp CACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAAAATAGCTCAGGCAGGATACAGTaGGCGGTGCACGCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: HTLALEPHVIVEDATKNSSGRIQ*AVHAQG
Trigger: TCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGA...GCTATTTTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCCCTGCTCTCCACAGGTaGCTGACCCTCAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSPALHR*LTLRWL
Trigger: CAGCCACCTGAGGGTCAGTCACCTGTGGAGAGCAGG...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCAGCTCAGCATGAGAAATaGATAAAGAGGGGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: QHSVACLAATHHSIWHLSAQHEK*IKRGSV
Trigger: CACAGAGCCCCTCTTTATTCATTTCTCATGCTGAGC...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp CTGCATGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGAGGTGTACAGATGAGTaGGCGGTCAACACTGCAGGC +
Preference number: 2 (lower is better)
Translates to: LHARLAVGLFICKEHVPQRCTDE*AVNTAG
Trigger: GCCTGCAGTGTTGACCGCTCACTCATCTGTACACCT...CTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp CTGCATGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTCTAACCACTTTCTaGGATCACAGAACCCGGGGG +
Preference number: 2 (lower is better)
Translates to: LHARLAVGLFICKEHVPQPLTTF*DHRTRG
Trigger: CCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGG...CTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp TGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCATGTGCCTCAGCCTTaGAAAGCAGGCAAGTCCACC +
Preference number: 2 (lower is better)
Translates to: CSPSCRSVHLQGACASALHVPQP*KAGKST
Trigger: GGTGGACTTGCCTGCTTTGCAAGGCTGAGGCACATG...CAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCTCTGCAAGGAGCATGTaGCTCAGCCTTGCAAAGCAG +
Preference number: 2 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCSARSM*LSLAKQ
Trigger: CTGCTTTGCAAGGCTGAGGCACATGCTCCTTGCAGA...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp CTGTGCCGTGCTGCTCTTGACACATGGGCGGGTGTATTAACAGAGTGTGAGGGAACACCCATATGGGGCTaGCCTGCCTGTGAATCACCA +
Preference number: 2 (lower is better)
Translates to: LCRAALDTWAGVLTECEGTPIWG*PACESP
Trigger: TGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGT...TCCCTCACACTCTGTTAATACACCCGCCCATGTGTCAAGAGCAGCACGGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 90 bp ACTGAGTCCTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTaGTCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGA +
Preference number: 2 (lower is better)
Translates to: TESSALYPQVWMLPR*STFTSTRSASSAVR
Trigger: TCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAGGACTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 90 bp ACACCCATATGGGGCTGGCCTGCCTGTGAATCACCATTGCCTTCATaGTCCTCACACATCACTACAGGCGGTCAGTGGCTATCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: TPIWGWPACESPLPS*SSHITTGGQWLSVL
Trigger: CAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTGAGGACAATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR-3UTR TCA 90 bp CCTGTCACCAGGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAACATGCATGTTGATTaGGACTTTTTCAGGGATACA +
Preference number: 2 (lower is better)
Translates to: PVTRRALGRGASKGLGGCNMHVD*DFFRDT
Trigger: TGTATCCCTGAAAAAGTCTCAATCAACATGCATGTT...GCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp CCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGTTCCCTCACAGTGCAAAATaGACCGCAAAGAAATGCACT +
Preference number: 2 (lower is better)
Translates to: PQLLSRAVLHARLAVGLFPHSAK*TAKKCT
Trigger: AGTGCATTTCTTTGCGGTTCATTTTGCACTGTGAGG...GAACAGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACTCAGGAGCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGTTCAGGATAGGCTCCTaGGTATGCTGCACACACACA +
Preference number: 2 (lower is better)
Translates to: THDSTAWRSPFERRPLAKFRIGS*VCCTHT
Trigger: TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAA...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCACACGGGAGGCACAATaGACAGTGCAGCGGGGTGGT +
Preference number: 2 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSTREAQ*TVQRGG
Trigger: ACCACCCCGCTGCACTGTGCATTGTGCCTCCCGTGT...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCCCTTATCCCTATCCCTaGCACATGGGGGCAAACTGT +
Preference number: 2 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSPYPYP*HMGANC
Trigger: ACAGTTTGCCCCCATGTGGCAGGGATAGGGATAAGG...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp AAACTTCTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCGGCTGCAGCTGGCAGTaGCCACGCGTTTCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: KLLTTQLLSEQVCSAPGCGCSWQ*PRVSLV
Trigger: GACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCC...GCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCCCTCAGACTCTGTCATaGCGCCATGGAGCACCTGCC +
Preference number: 2 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSPQTLS*RHGAPA
Trigger: GGCAGGTGCTCCATGGCGCCATGACAGAGTCTGAGG...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTGCAGGCACCTGGCATTaGGCAGAAGACCCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: LALRTGNSKSGTCMLIETAGTWH*AEDPVL
Trigger: CAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGC...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp AAACTTCTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCCCTGAGCAGCCCCACTaGCCTCTCCTACTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: KLLTTQLLSEQVCSAPGCPEQPH*PLLLRK
Trigger: CTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGG...GCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCGTCCCAGAAAACAGCTaGTACCAGGTTAGGGGGTTA +
Preference number: 2 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCVPENS*YQVRGL
Trigger: TAACCCCCTAACCTGGTACCAGCTGTTTTCTGGGAC...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 90 bp CACCAGAGTCACACGCTCGTCCTGCAGAGGAAACACACCCTGGCCTaGGAACCCCACGTTATCGTGGAAGATGCAACCAAAAATAGCTCT +
Preference number: 2 (lower is better)
Translates to: HQSHTLVLQRKHTLA*EPHVIVEDATKNSS
Trigger: AGAGCTATTTTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGACTCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCATGGGAACCCTCATTTaGGTGAACTGTACAGCCAGC +
Preference number: 2 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSMGTLI*VNCTAS
Trigger: GCTGGCTGTACAGTTCACTCAAATGAGGGTTCCCAT...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTGGCTCCTGCGTATGCTaGACACACACACTAGCAGAC +
Preference number: 2 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSGSCVC*THTLAD
Trigger: GTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCC...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp GAGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAACACATCAACGAGGAGTaGCAGCTCAGCTGTCAGAGT +
Preference number: 2 (lower is better)
Translates to: EETHPGLGTPRYRGRCNQHINEE*QLSCQS
Trigger: ACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTG...TTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp TTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTACTGGCCTCTCCTACTaGGGAAGAGGGCACCGAGCC +
Preference number: 2 (lower is better)
Translates to: LLSEQVCSAPGCTEFVPATGLSY*GRGHRA
Trigger: GGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGT...AGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTCACACTTCCTCACAGTaGAAAATGAACCGCAAAGAA +
Preference number: 2 (lower is better)
Translates to: EAASQKGVPASGCWMGECHTSSQ*KMNRKE
Trigger: TTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTG...ACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCTGTAGGTTCTCGGGTTaGTGGATTGGTGACCTTCAC +
Preference number: 2 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSCRFSG*WIGDLH
Trigger: GTGAAGGTCACCAATCCACCAACCCGAGAACCTACA...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp CAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTGTACACCCATATGGGGCTaGCCTGCCTGTGAATCACCA +
Preference number: 2 (lower is better)
Translates to: QVGAGWASVLPKPLVTACTPIWG*PACESP
Trigger: TGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGT...ACAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp CATGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTGCTGCTCTTGACACATaGGCGGGTGTATTAACAGAG +
Preference number: 2 (lower is better)
Translates to: HARLAVGLFICKEHVPQPAALDT*AGVLTE
Trigger: CTCTGTTAATACACCCGCCCATGTGTCAAGAGCAGC...AGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCAAAATGCTGTCATGCTTaGATAGACTTAAGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: QHSVACLAATHHSIWHLSKCCHA*IDLRPV
Trigger: AACTGGCCTTAAGTCTATTCAAGCATGACAGCATTT...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp GCGTTTCTCTGGTCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACGTCACACGCTCGTCCTaGAGAGGAAACACACCCTGG +
Preference number: 2 (lower is better)
Translates to: AFLWSRECASNHFLRSQNVTRSS*RGNTPW
Trigger: CCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGAC...GTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp TCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTAGAGGCAAGTCCACCCTGTaGGACAAAGCTGCCCCTTCA +
Preference number: 2 (lower is better)
Translates to: SAPGCTEFVPASAQERFRGKSTL*DKAAPS
Trigger: TGAAGGGGCAGCTTTGTCCCACAGGGTGGACTTGCC...TCTAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCCACACACTAGCAGACTaGGCATGCACAGCTCTGCAA +
Preference number: 2 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSHTLAD*ACTALQ
Trigger: TTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGTGTG...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR GCA 90 bp CTGGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGAAAACACTGTGCTGGTaGTGTTTAACAACCAAATAT +
Preference number: 2 (lower is better)
Translates to: LGWLQLAVPTRFSGQENAKTLCW*CLTTKY
Trigger: ATATTTGGTTGTTAAACAGCACCAGCACAGTGTTTT...CGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp CAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCATCGGGCTGTGCTGCATaGTCGCCTAGCTGTAGGTCT +
Preference number: 2 (lower is better)
Translates to: QLLSEQVCSAPGCTEFVPSGCAA*SPSCRS
Trigger: AGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGA...TGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCCCTATCCCTGCCACATaGGGGCAAACTGTCCAAGAA +
Preference number: 2 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSPIPAT*GQTVQE
Trigger: TTCTTGGACAGTTTGCCCCCATGTGGCAGGGATAGG...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp CTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTTGTCAACTTTCACATCACTACAGGCGGTCAGTaGCTATCAGTCCTGCAATAT +
Preference number: 2 (lower is better)
Translates to: LCPLPTGMDAASLVNFHITTGGQ*LSVLQY
Trigger: ATATTGCAGGACTGATAGCCACTGACCGCCTGTAGT...GATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR-3UTR TCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTGTAGACACACAGATCTaGGCTTGGATGGTGGTCACT +
Preference number: 2 (lower is better)
Translates to: LALRTGNSKSGTCMLIETVDTQI*AWMVVT
Trigger: AGTGACCACCATCCAAGCTCAGATCTGTGTGTCTAC...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR TCA 90 bp CAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGGGCTGGCCTGCCTGTaGATCACCATTGCCTTCATT +
Preference number: 2 (lower is better)
Translates to: QLLSEQVCSAPGCTEFVPGLACL*ITIAFI
Trigger: AATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCC...TGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTCTGGGCTCAGATGGTTaGCTGTTCTCTTCCAGTACT +
Preference number: 2 (lower is better)
Translates to: LALRTGNSKSGTCMLIETLGSDG*LFSSST
Trigger: AGTACTGGAAGAGAACAGCCAACCATCTGAGCCCAG...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp AAACTTCTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCCAACTAACACCCATATaGGGCTGGCCTGCCTGTGAA +
Preference number: 2 (lower is better)
Translates to: KLLTTQLLSEQVCSAPGCQLTPI*GWPACE
Trigger: TTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTG...GCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCAACCCCACGTTATCGTaGAAGATGCAACCAAAAATA +
Preference number: 2 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCNPTLS*KMQPKI
Trigger: TATTTTTGGTTGCATCTTCCACGATAACGTGGGGTT...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp CAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAAACACACCCTGGCCTTaGAACCCCACGTTATCGTGG +
Preference number: 2 (lower is better)
Translates to: QLLSEQVCSAPGCTEFVPNTPWP*NPTLSW
Trigger: CCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTT...TGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 90 bp AGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTaGTCCCAGCTTCTGCACAGGAAAGGTTTAGAGGAAGCACTCGGG +
Preference number: 2 (lower is better)
Translates to: SYFLNRCVLHQDAQN*SQLLHRKGLEEALG
Trigger: CCCGAGTGCTTCCTCTAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GCGTTTCTCTGGTCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACACCCACAGGTATGGATaGTGCCTCGCTTGTCAACTT +
Preference number: 2 (lower is better)
Translates to: AFLWSRECASNHFLRSQNTHRYG*CLACQL
Trigger: AAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGT...GTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp AAACTTCTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCTTCAGTGAATCAGCGTaGGGTGCACAGGTGTACAGA +
Preference number: 2 (lower is better)
Translates to: KLLTTQLLSEQVCSAPGCFSESA*GAQVYR
Trigger: TCTGTACACCTGTGCACCGCACGCTGATTCACTGAA...GCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp TACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTCTACCCACAGGTATaGATGCTGCCTCGCTTGTCA +
Preference number: 2 (lower is better)
Translates to: YFLNRCVLHQDAQNLSQLLYPQV*MLPRLS
Trigger: TGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAG...AAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CCA 90 bp TTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTCAAGTGGGTGCTGGATaGGCGAGTGTGCTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: LLSEQVCSAPGCTEFVPAQVGAG*ASVLPK
Trigger: TTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG...AGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp GCGTTTCTCTGGTCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACCAACCAAATATTCAGTaGATCAGCGTGCGGTGCACA +
Preference number: 2 (lower is better)
Translates to: AFLWSRECASNHFLRSQNQPNIQ*ISVRCT
Trigger: TGTGCACCGCACGCTGATTCACTGAATATTTGGTTG...GTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp CAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTGTACTGCATCAAGTTGCTaGATTTCCTATGGCAAGAAT +
Preference number: 2 (lower is better)
Translates to: QVGAGWASVLPKPLVTACTASSC*ISYGKN
Trigger: ATTCTTGCCATAGGAAATTCAGCAACTTGATGCAGT...ACAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR TCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGTAGACACACAGATCTaGGCTTGGATGGTGGTCACT +
Preference number: 2 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLVDTQI*AWMVVT
Trigger: AGTGACCACCATCCAAGCTCAGATCTGTGTGTCTAC...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR-3UTR CCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCATTATTCTCCTAGGATaGCAATGGGAACCCTCATTT +
Preference number: 2 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSIILLG*QWEPSF
Trigger: AAATGAGGGTTCCCATTGCCATCCTAGGAGAATAAT...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CCA 90 bp TTAGTGATTCTTGATGGCCACAAATGGTATTTGCAAAGGAAACTTCTCACCACCCAAGTGGGTGCTGGATaGGCGAGTGTGCTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: LVILDGHKWYLQRKLLTTQVGAG*ASVLPK
Trigger: TTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG...GGTGGTGAGAAGTTTCCTTTGCAAATACCATTTGTGGCCATCAAGAATCACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp AGAGAGCTTCAGAGATTTCACACTTCCTCACAGTGCAAAATGAACCGCAAAGAACACAGGTATGGATGCTaGCTCGCTTGTCAACTTTCA +
Preference number: 2 (lower is better)
Translates to: RELQRFHTSSQCKMNRKEHRYGC*LACQLS
Trigger: TGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTG...TTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTGAAATCTCTGAAGCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGCGCATGCACAGCTCTaGAAAGCGTGTGTCTTAGGA +
Preference number: 2 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVAHAQL*KACVLG
Trigger: TCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGC...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR-3UTR GCA 90 bp CAAGTTGCTGAATTTCCTATGGCAAGAATTTCCCGATTTTTCAAAAAGCACCAGCTCTGGTCAAGAGAATaGGCCTCTAACCACTTTCTG +
Preference number: 2 (lower is better)
Translates to: QVAEFPMARISRFFKKHQLWSRE*ASNHFL
Trigger: CAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAG...CTGGTGCTTTTTGAAAAATCGGGAAATTCTTGCCATAGGAAATTCAGCAACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR GCA 90 bp TTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTAAAACACTGTGCTGGTaGTGTTTAACAACCAAATAT +
Preference number: 2 (lower is better)
Translates to: LLSEQVCSAPGCTEFVPAKTLCW*CLTTKY
Trigger: ATATTTGGTTGTTAAACAGCACCAGCACAGTGTTTT...AGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 90 bp GGAAGAAAATGTCATTTAGTGATTCTTGATGGCCACAAATGGTATTaGCAAAGGAAACTTCTCACCACCCAGTTACTTTCTGAACAGGTG +
Preference number: 2 (lower is better)
Translates to: GRKCHLVILDGHKWY*QRKLLTTQLLSEQV
Trigger: CACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTTCCTTTGCAAATACCATTTGTGGCCATCAAGAATCACTAAATGACATTTTCTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp AGTGGAGCTGACGTCAGGGCGCCGATGCCCTCTCCCTaGGGATGGGGCCTTCCCACCCCCGCACAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: SGADVRAPMPSP*GWGLPTPAQVG
Trigger: GCCCACCTGTGCGGGGGTGGGAAGGCCCCATCCTCAGGGAGAGGGCATCGGCGCCCTGACGTCAGCTCCACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp CCCTGCCCTCCTCGGCCCCGAGACTGGAAGAGCAGCTaGCACGTTTGGGACCCAGGCGGCGCCCAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: PCPPRPRDWKSS*HVWDPGGAQAE
Trigger: TTCAGCCTGGGCGCCGCCTGGGTCCCAAACGTGGCAGCTGCTCTTCCAGTCTCGGGGCCGAGGAGGGCAGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp CCTCGGCCCCGAGACTGGAAGAGCAGCTGCCACGTTTaGGACCCAGGCGGCGCCCAGGCTGAAGGGAGCTGC +
Preference number: 3 (lower is better)
Translates to: PRPRDWKSSCHV*DPGGAQAEGSC
Trigger: GCAGCTCCCTTCAGCCTGGGCGCCGCCTGGGTCCCAAACGTGGCAGCTGCTCTTCCAGTCTCGGGGCCGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp TGGGACCCAGGCGGCGCCCAGGCTGAAGGGAGCTGCTaGGGGCTAAGCTCCAGGACACAGGACGTGGCTGGC +
Preference number: 3 (lower is better)
Translates to: WDPGGAQAEGSC*GLSSRTQDVAG
Trigger: GCCAGCCACGTCCTGTGTCCTGGAGCTTAGCCCTCAGCAGCTCCCTTCAGCCTGGGCGCCGCCTGGGTCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp GGAGCGCCCTGGCCCACACCCTCAGGCAGGATACAGTaGGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGC +
Preference number: 3 (lower is better)
Translates to: GAPWPTPSGRIQ*AVHAQGVFLSS
Trigger: GCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGGTGTGGGCCAGGGCGCTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 72 bp CTGGCCTCAGACTCTGTCATGGCGCCATGGAGCACCTaGCGCACGGTGTGGGGCAGTGTGGGACCCACGCTG +
Preference number: 3 (lower is better)
Translates to: LASDSVMAPWST*RTVWGSVGPTL
Trigger: CAGCGTGGGTCCCACACTGCCCCACACCGTGCGGCAGGTGCTCCATGGCGCCATGACAGAGTCTGAGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp TCTGTCATGGCGCCATGGAGCACCTGCCGCACGGTGTaGGGCAGTGTGGGACCCACGCTGCCAGCCTCTGCT +
Preference number: 3 (lower is better)
Translates to: SVMAPWSTCRTV*GSVGPTLPASA
Trigger: AGCAGAGGCTGGCAGCGTGGGTCCCACACTGCCCCACACCGTGCGGCAGGTGCTCCATGGCGCCATGACAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp GGTGCACGCCCAGGGAGTCTTCCTGAGCAGCCCCACTaGCCTCTCCTACTGCGGAAGAGGGCACCGAGCCCT +
Preference number: 3 (lower is better)
Translates to: GARPGSLPEQPH*PLLLRKRAPSP
Trigger: AGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGGAAGACTCCCTGGGCGTGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp CTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCTaGCCAGGAGCAGGGCAGCCCAGCCACCGACGCATC +
Preference number: 3 (lower is better)
Translates to: LCKACVLGRAPA*PGAGQPSHRRI
Trigger: GATGCGTCGGTGGCTGGGCTGCCCTGCTCCTGGTCAGGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR-3UTR CAA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGTCCCCGACTGTGGACTaGGCAGCCATGGGACGGGTG +
Preference number: 3 (lower is better)
Translates to: GSPHHKTGRANTHVLSAASPTVD*AAMGRV
Trigger: CACCCGTCCCATGGCTGCCAAGTCCACAGTCGGGGA...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp GGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTaGGCAGCCCCACTGGCCTCTCCTACTGCGGAAGAG +
Preference number: 3 (lower is better)
Translates to: GYSARCTPRESS*AAPLASPTAEE
Trigger: CTCTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 72 bp CATCCCCGACTGTGGACTTGGCAGCCATGGGACGGGTaGTCGCTGCCTCTGGGGCATGAAGCTGTCCAGCCA +
Preference number: 3 (lower is better)
Translates to: HPRLWTWQPWDG*SLPLGHEAVQP
Trigger: TGGCTGGACAGCTTCATGCCCCAGAGGCAGCGAGCACCCGTCCCATGGCTGCCAAGTCCACAGTCGGGGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp GGGGGCTCTGCGGTCACCAGAGTCACACGCTCGTCCTaGAGAGGAAACACACCCTGGCCTTGGAACCCCACG +
Preference number: 3 (lower is better)
Translates to: GGSAVTRVTRSS*RGNTPWPWNPT
Trigger: CGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGACTCTGGTGACCGCAGAGCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp TTGCCGTGTGCTGGCCTCTACAGTGCACTGTGGCGATaGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGC +
Preference number: 3 (lower is better)
Translates to: LPCAGLYSALWR*ADPACTAQAGS
Trigger: GCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCACTGTAGAGGCCAGCACACGGCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp AGTCCAGGTCTGGCCTCAGACTCTGTCATGGCGCCATaGAGCACCTGCCGCACGGTGTGGGGCAGTGTGGGA +
Preference number: 3 (lower is better)
Translates to: SPGLASDSVMAP*STCRTVWGSVG
Trigger: TCCCACACTGCCCCACACCGTGCGGCAGGTGCTCCATGGCGCCATGACAGAGTCTGAGGCCAGACCTGGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp GGTGCCTGGTCTTCACAGGTGCCTGCTCTCCACAGGTaGCTGACCCTCAGGTGGCTGGTCACCCCATGGCTG +
Preference number: 3 (lower is better)
Translates to: GAWSSQVPALHR*LTLRWLVTPWL
Trigger: CAGCCATGGGGTGACCAGCCACCTGAGGGTCAGTCACCTGTGGAGAGCAGGCACCTGTGAAGACCAGGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp GCGCCAGTCCTCAGGTGCCTGGTCTTCACAGGTGCCTaGTCTCCACAGGTGACTGACCCTCAGGTGGCTGGT +
Preference number: 3 (lower is better)
Translates to: APVLRCLVFTGA*SPQVTDPQVAG
Trigger: ACCAGCCACCTGAGGGTCAGTCACCTGTGGAGAGCAGGCACCTGTGAAGACCAGGCACCTGAGGACTGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp GGAGTCTTCCTGAGCAGCCCCACTGGCCTCTCCTACTaGGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCT +
Preference number: 3 (lower is better)
Translates to: GVFLSSPTGLSY*GRGHRALTESS
Trigger: AGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGGAAGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CAA 90 bp CCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTTGGATGCTGCCTCGCTaGTCAACTTTCACATCAACG +
Preference number: 3 (lower is better)
Translates to: PGSCSGRPQLLSRAVLHAWMLPR*STFTST
Trigger: CGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCA...AGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 72 bp GACTGTGGACTTGGCAGCCATGGGACGGGTGCTCGCTaGCTCTGGGGCATGAAGCTGTCCAGCCATGATCAC +
Preference number: 3 (lower is better)
Translates to: DCGLGSHGTGAR*LWGMKLSSHDH
Trigger: GTGATCATGGCTGGACAGCTTCATGCCCCAGAGGCAGCGAGCACCCGTCCCATGGCTGCCAAGTCCACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp CACCACTCAATCTGGCACCTGTCACCAGGAGGGCCTTaGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCA +
Preference number: 3 (lower is better)
Translates to: HHSIWHLSPGGP*AGAHLKVWEAA
Trigger: TGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGGTGCCAGATTGAGTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp CAACACCCACGTGCTGAGTGCAGCGTCAACACAGCGTaGCCTGCCTGGCAGCAACCCACCACTCAATCTGGC +
Preference number: 3 (lower is better)
Translates to: QHPRAECSVNTA*PAWQQPTTQSG
Trigger: GCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTGACGCTGCACTCAGCACGTGGGTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CAA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGCTGCCTGGCTTCCTCTaGCTTGGGGTGACTTCTACA +
Preference number: 3 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGLPGFL*LGVTST
Trigger: TGTAGAAGTCACCCCAAGCAAGAGGAAGCCAGGCAG...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp CTTCCTCTTGCTTGGGGTGACTTCTACACCCTGATCTaGTGCCTGCACCAGCCGGGTGGGGTTCCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: LPLAWGDFYTLI*CLHQPGGVPGQ
Trigger: CTGGCCTGGAACCCCACCCGGCTGGTGCAGGCATCAGATCAGGGTGTAGAAGTCACCCCAAGCAAGAGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp CCTGGCTTCCTCTTGCTTGGGGTGACTTCTACACCCTaGTCTGATGCCTGCACCAGCCGGGTGGGGTTCCAG +
Preference number: 3 (lower is better)
Translates to: PGFLLLGVTSTP*SDACTSRVGFQ
Trigger: CTGGAACCCCACCCGGCTGGTGCAGGCATCAGATCAGGGTGTAGAAGTCACCCCAAGCAAGAGGAAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp ACCGAACTGAGTACGTCTCAGGGCCTGGGTGTCCAATaGTCGGGGCCTCCTGAACGACATGGGCCTTCGTTC +
Preference number: 3 (lower is better)
Translates to: TELSTSQGLGVQ*SGPPERHGPSF
Trigger: GAACGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCATTGGACACCCAGGCCCTGAGACGTACTCAGTTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR CCA 72 bp GGACTTGGCAGCCATGGGACGGGTGCTCGCTGCCTCTaGGGCATGAAGCTGTCCAGCCATGATCACTTTCCT +
Preference number: 3 (lower is better)
Translates to: GLGSHGTGARCL*GMKLSSHDHFP
Trigger: AGGAAAGTGATCATGGCTGGACAGCTTCATGCCCCAGAGGCAGCGAGCACCCGTCCCATGGCTGCCAAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp CCCTCGGTAGGGCTTGGGGGTCATAGGGGGCCACGATaGATCTGTGACTCTGGGCTCAGATGGTTGGCTGTT +
Preference number: 3 (lower is better)
Translates to: PSVGLGGHRGPR*ICDSGLRWLAV
Trigger: AACAGCCAACCATCTGAGCCCAGAGTCACAGATCCATCGTGGCCCCCTATGACCCCCAAGCCCTACCGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp CCGGGTGGGGTTCCAGGCCAGACCGTGGAAGAAGCCTaGAATGCACCATCAGCTGTAGGTTCTCGGGTTGGT +
Preference number: 3 (lower is better)
Translates to: PGGVPGQTVEEA*NAPSAVGSRVG
Trigger: ACCAACCCGAGAACCTACAGCTGATGGTGCATTTCAGGCTTCTTCCACGGTCTGGCCTGGAACCCCACCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp AGAAATGCACTTCCTCTGAGCCAGCGAAGACTGGGGTaGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: RNALPLSQRRLG*LQLAVPTRFSG
Trigger: ACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CAA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCCGCAGGCACCTGGCATaGGGCAGAAGACCCAGTCCT +
Preference number: 3 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSRRHLA*GRRPSP
Trigger: AGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCG...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CAA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACGAAATGCTGTCATGCTaGAATAGACTTAAGGCCAGT +
Preference number: 3 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDEMLSC*NRLKAS
Trigger: ACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp GCCATGAGCACGTCTCACACCCACGACAGCACAGCATaGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAG +
Preference number: 3 (lower is better)
Translates to: AMSTSHTHDSTA*RSPFERRPLAK
Trigger: CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGTGTGAGACGTGCTCATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp CTGCTGAGGGCTAAGCTCCAGGACACAGGACGTGGCTaGCCCTCAGAACAGGGAACTCCAAGAGTGGAACAT +
Preference number: 3 (lower is better)
Translates to: LLRAKLQDTGRG*PSEQGTPRVEH
Trigger: ATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAGCCACGTCCTGTGTCCTGGAGCTTAGCCCTCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp GGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTaGTCAAGAGAATGCGCCTCTAACCACTTTCTGAGA +
Preference number: 3 (lower is better)
Translates to: GVAAAGSAHAFL*SRECASNHFLR
Trigger: TCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp GTGCCCGGAGAGCCCTCAGGTGTCCCAGAAAACAGCTaGTACCAGGTTAGGGGGTTAAGACAGAATGCCCAG +
Preference number: 3 (lower is better)
Translates to: VPGEPSGVPENS*YQVRGLRQNAQ
Trigger: CTGGGCATTCTGTCTTAACCCCCTAACCTGGTACCAGCTGTTTTCTGGGACACCTGAGGGCTCTCCGGGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR-3UTR CAA 90 bp CTGCATGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGTGTGCCGTGCTGCTCTaGACACATGGGCGGGTGTAT +
Preference number: 3 (lower is better)
Translates to: LHARLAVGLFICKEHVPQCAVLL*THGRVY
Trigger: ATACACCCGCCCATGTGTCAAGAGCAGCACGGCACA...CTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp CACTCAAGACATGTGATACACAAGACTCTCAGTCACTaGGCTCCCTGCCCTCCTCGGCCCCGAGACTGGAAG +
Preference number: 3 (lower is better)
Translates to: HSRHVIHKTLSH*APCPPRPRDWK
Trigger: CTTCCAGTCTCGGGGCCGAGGAGGGCAGGGAGCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp GGCTCCTGCGTATGCTGCACACACACACTAGCAGACTaGGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGG +
Preference number: 3 (lower is better)
Translates to: GSCVCCTHTLAD*ACTALQSVCLR
Trigger: CCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR GCA 72 bp GCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTaGCAACCAAACCTGGGTTTTGACAAAGTGAAGGTG +
Preference number: 3 (lower is better)
Translates to: AQAPGIGQKTQS*QPNLGFDKVKV
Trigger: CACCTTCACTTTGTCAAAACCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp GAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTaGTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGT +
Preference number: 3 (lower is better)
Translates to: EAASQKGVPASG*WMGECASKTLS
Trigger: ACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 72 bp AAAGGTTTAGAGGAAGCACTCGGGACAGACACTCTGTaGCAGAGCGTGGGACAAGCACAGCTCTCCCCAGTG +
Preference number: 3 (lower is better)
Translates to: KGLEEALGTDTL*QSVGQAQLSPV
Trigger: CACTGGGGAGAGCTGTGCTTGTCCCACGCTCTGGCACAGAGTGTCTGTCCCGAGTGCTTCCTCTAAACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp AATAAAGAGGGGCTCTGTGCCAGTGTAGGGCCAAAGTaGGAAGTAGGCGCCAGTCCTCAGGTGCCTGGTCTT +
Preference number: 3 (lower is better)
Translates to: NKEGLCASVGPK*EVGASPQVPGL
Trigger: AAGACCAGGCACCTGAGGACTGGCGCCTACTTCCCACTTTGGCCCTACACTGGCACAGAGCCCCTCTTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp GCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTaGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTAC +
Preference number: 3 (lower is better)
Translates to: AASQKGVPASGC*MGECASKTLSY
Trigger: GTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp AAGAGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTaGGTGCTGGATGGGCGAGTGTGCTTCCAAAACCCT +
Preference number: 3 (lower is better)
Translates to: KRSSKSEGGPSK*VLDGRVCFQNP
Trigger: AGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp GGCCTGGCTACAATCGCAAACACGCAGCCACGTCTCTaGTTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTG +
Preference number: 3 (lower is better)
Translates to: GLATIANTQPRL*FDLWGLVFFPV
Trigger: CACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGCGTGTTTGCGATTGTAGCCAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp TTCAGTGAATCAGCGTGCGGTGCACAGGTGTACAGATaGGTGAGCGGTCAACACTGCAGGCCACTAACCCCA +
Preference number: 3 (lower is better)
Translates to: FSESACGAQVYR*VSGQHCRPLTP
Trigger: TGGGGTTAGTGGCCTGCAGTGTTGACCGCTCACTCATCTGTACACCTGTGCACCGCACGCTGATTCACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 72 bp GCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATaGGCCTCTAACCACTTTCTGAGATCACAGAACCCG +
Preference number: 3 (lower is better)
Translates to: AGSAHAFLWSRE*ASNHFLRSQNP
Trigger: CGGGTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp CGTGACTTTAGGCATCAGATAAGGGAGAGATGGCAGTaGAAGGCCATGAGCACGTCTCACACCCACGACAGC +
Preference number: 3 (lower is better)
Translates to: RDFRHQIRERWQ*KAMSTSHTHDS
Trigger: GCTGTCGTGGGTGTGAGACGTGCTCATGGCCTTCCACTGCCATCTCTCCCTTATCTGATGCCTAAAGTCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp AGAGTCACACGCTCGTCCTGCAGAGGAAACACACCCTaGCCTTGGAACCCCACGTTATCGTGGAAGATGCAA +
Preference number: 3 (lower is better)
Translates to: RVTRSSCRGNTP*PWNPTLSWKMQ
Trigger: TTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp CAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATaGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCT +
Preference number: 3 (lower is better)
Translates to: QVRRGSQQVGAG*ASVLPKPLVTA
Trigger: AGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp AACCAAAGTGCTGACTTGGGGAGTTTTTGTTGCCGTTaGGGAAGGGATGTCGGACACCTCGCTGATCCCAGG +
Preference number: 3 (lower is better)
Translates to: NQSADLGSFCCR*GRDVGHLADPR
Trigger: CCTGGGATCAGCGAGGTGTCCGACATCCCTTCCTCAACGGCAACAAAAACTCCCCAAGTCAGCACTTTGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp CCTGCAATATTCACCATCAACAGATGCAGACCGAACTaGGTACGTCTCAGGGCCTGGGTGTCCAATGCTCGG +
Preference number: 3 (lower is better)
Translates to: PAIFTINRCRPN*VRLRAWVSNAR
Trigger: CCGAGCATTGGACACCCAGGCCCTGAGACGTACTCAGTTCGGTCTGCATCTGTTGATGGTGAATATTGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR GCA 72 bp CACGGACCCCTTTCTCCGCGTGTTGTATTTCTAATTTaGCGTGTGCTGGCCTCTACAGTGCACTGTGGCGAT +
Preference number: 3 (lower is better)
Translates to: HGPLSPRVVFLI*RVLASTVHCGD
Trigger: ATCGCCACAGTGCACTGTAGAGGCCAGCACACGGCAAATTAGAAATACAACACGCGGAGAAAGGGGTCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp GAGAACTCGGGAGATGTCCAGAAGGAACAGGGGTTATaGTGTCAATTCCAGTCCAGGTCTGGCCTCAGACTC +
Preference number: 3 (lower is better)
Translates to: ENSGDVQKEQGL*CQFQSRSGLRL
Trigger: GAGTCTGAGGCCAGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGAGTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp CTGAGTCCTCTGCCCTCTACCCACAGGTATGGATGCTaGCTCGCTTGTCAACTTTCACATCAACGAGGAGTG +
Preference number: 3 (lower is better)
Translates to: LSPLPSTHRYGC*LACQLSHQRGV
Trigger: CACTCCTCGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAGGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp ACACGCTCGTCCTGCAGAGGAAACACACCCTGGCCTTaGAACCCCACGTTATCGTGGAAGATGCAACCAAAA +
Preference number: 3 (lower is better)
Translates to: TRSSCRGNTPWP*NPTLSWKMQPK
Trigger: TTTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp TCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTaGCAGCCGTTGGCTCCAGGACACTCAAGACATGTG +
Preference number: 3 (lower is better)
Translates to: SDSIFGAWCFSQ*QPLAPGHSRHV
Trigger: CACATGTCTTGAGTGTCCTGGAGCCAACGGCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp CTCTGCTGCCTGGAACGTTCTAGATTCCTCTATGAGTaGGCTCACGGACCCCTTTCTCCGCGTGTTGTATTT +
Preference number: 3 (lower is better)
Translates to: LCCLERSRFLYE*AHGPLSPRVVF
Trigger: AAATACAACACGCGGAGAAAGGGGTCCGTGAGCCCACTCATAGAGGAATCTAGAACGTTCCAGGCAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CCA 72 bp GGCCACGATGGATCTGTGACTCTGGGCTCAGATGGTTaGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTA +
Preference number: 3 (lower is better)
Translates to: GHDGSVTLGSDG*LFSSSTERRSL
Trigger: TAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCCCAGAGTCACAGATCCATCGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CAA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTCATGGAGGTCACCTTTaGAAAGACGCCCCCTGGCTA +
Preference number: 3 (lower is better)
Translates to: LALRTGNSKSGTCMLIETHGGHL*KDAPWL
Trigger: TAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATG...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CAA 90 bp TCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACCCGGGGGCCTCATGGATGCTGCCTCGCTaGTCAACTTTCACATCAACG +
Preference number: 3 (lower is better)
Translates to: SRECASNHFLRSQNPGASWMLPR*STFTST
Trigger: CGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCA...TGAGGCCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp ATTCTCCTAGGATGGCAATGGGAACCCTCATTTGAGTaGACTGTACAGCCAGCCAGAGAGAAACCCCCACAG +
Preference number: 3 (lower is better)
Translates to: ILLGWQWEPSFE*TVQPAREKPPQ
Trigger: CTGTGGGGGTTTCTCTCTGGCTGGCTGTACAGTTCACTCAAATGAGGGTTCCCATTGCCATCCTAGGAGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp ATGGGTCCAGCATTAAACCAGCATCTAAGTAAGCACTaGCACCTCAAAGCCACTGACAACAGAGAGGGCGTC +
Preference number: 3 (lower is better)
Translates to: MGPALNQHLSKH*HLKATDNREGV
Trigger: GACGCCCTCTCTGTTGTCAGTGGCTTTGAGGTGTCAGTGCTTACTTAGATGCTGGTTTAATGCTGGACCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp GCAGAAGACCCAGTCCTGCCAACCAAACCTGGGTTTTaGCAAAGTGAAGGTGCGTTTAACAAATGGGTCCAG +
Preference number: 3 (lower is better)
Translates to: AEDPVLPTKPGF*QSEGAFNKWVQ
Trigger: CTGGACCCATTTGTTAAACGCACCTTCACTTTGTCAAAACCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp AAATGCCCAGAGGCCAGAAGTGTGCCATGCTCAGCATaGGAAATGAATAAAGAGGGGCTCTGTGCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: KCPEARSVPCSA*EMNKEGLCASV
Trigger: TACACTGGCACAGAGCCCCTCTTTATTCATTTCTCATGCTGAGCATGGCACACTTCTGGCCTCTGGGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp CACACATCACTACAGGCGGTCAGTGGCTATCAGTCCTaGAATATTCACCATCAACAGATGCAGACCGAACTG +
Preference number: 3 (lower is better)
Translates to: HTSLQAVSGYQS*NIHHQQMQTEL
Trigger: CAGTTCGGTCTGCATCTGTTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR TCA 72 bp ACTTCCAAACCCGGAGTCTGTGAACTCTGTATTACGTaGTGTACCAAGAGGCAGATTAGGAAGAACCGTCCG +
Preference number: 3 (lower is better)
Translates to: TSKPGVCELCIT*CTKRQIRKNRP
Trigger: CGGACGGTTCTTCCTAATCTGCCTCTTGGTACATCACGTAATACAGAGTTCACAGACTCCGGGTTTGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR TCA 72 bp AATTATTCTCCTAGGATGGCAATGGGAACCCTCATTTaGGTGAACTGTACAGCCAGCCAGAGAGAAACCCCC +
Preference number: 3 (lower is better)
Translates to: NYSPRMAMGTLI*VNCTASQRETP
Trigger: GGGGGTTTCTCTCTGGCTGGCTGTACAGTTCACTCAAATGAGGGTTCCCATTGCCATCCTAGGAGAATAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR GCA 72 bp GCTGCCTCGCTTGTCAACTTTCACATCAACGAGGAGTaGCAGCTCAGCTGTCAGAGTCTCCATTTGTTTATA +
Preference number: 3 (lower is better)
Translates to: AASLVNFHINEE*QLSCQSLHLFI
Trigger: TATAAACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGGCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 72 bp CAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATaGACAGAATTTGTCCCAGCTTCTGCACAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: QLLSEQVCSAPG*TEFVPASAQER
Trigger: CCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp AGCCTGAAATGCACCATCAGCTGTAGGTTCTCGGGTTaGTGGATTGGTGACCTTCACTTTCTGACTTATGCT +
Preference number: 3 (lower is better)
Translates to: SLKCTISCRFSG*WIGDLHFLTYA
Trigger: AGCATAAGTCAGAAAGTGAAGGTCACCAATCCACCAACCCGAGAACCTACAGCTGATGGTGCATTTCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CAA 90 bp GTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTATCACCATTGCCTTCATaGTCCTCACACATCACTACA +
Preference number: 3 (lower is better)
Translates to: VLHQDAQNLSQLLHRKGLSPLPS*SSHITT
Trigger: TGTAGTGATGTGTGAGGACAATGAAGGCAATGGTGA...TAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR TCA 72 bp AGCTTCAGAGATTTCACACTTCCTCACAGTGCAAAATaGACCGCAAAGAAATGCACTTCCTCTGAGCCAGCG +
Preference number: 3 (lower is better)
Translates to: SFRDFTLPHSAK*TAKKCTSSEPA
Trigger: CGCTGGCTCAGAGGAAGTGCATTTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTGAAATCTCTGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR GCA 72 bp TATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTaGACACACACACTAGCAGACTGCGCATGCACAGCT +
Preference number: 3 (lower is better)
Translates to: YFTKFRIGSCVC*THTLADCACTA
Trigger: AGCTGTGCATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR GCA 72 bp CTGTTGGGATATTTTACAAAATTCAGGATAGGCTCCTaGGTATGCTGCACACACACACTAGCAGACTGCGCA +
Preference number: 3 (lower is better)
Translates to: LLGYFTKFRIGS*VCCTHTLADCA
Trigger: TGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
3UTR CCA 72 bp GTAACCATGAATTTACAACTAACACCCATATGGGGCTaGCCTGCCTGTGAATCACCATTGCCTTCATTGTCC +
Preference number: 3 (lower is better)
Translates to: VTMNLQLTPIWG*PACESPLPSLS
Trigger: GGACAATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTGTAAATTCATGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp CCTTCATTGTCCTCACACATCACTACAGGCGGTCAGTaGCTATCAGTCCTGCAATATTCACCATCAACAGAT +
Preference number: 3 (lower is better)
Translates to: PSLSSHITTGGQ*LSVLQYSPSTD
Trigger: ATCTGTTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTGAGGACAATGAAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
3UTR CCA 72 bp CTGAAATGCACCATCAGCTGTAGGTTCTCGGGTTGGTaGATTGGTGACCTTCACTTTCTGACTTATGCTTTT +
Preference number: 3 (lower is better)
Translates to: LKCTISCRFSGW*IGDLHFLTYAF
Trigger: AAAAGCATAAGTCAGAAAGTGAAGGTCACCAATCCACCAACCCGAGAACCTACAGCTGATGGTGCATTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR-3UTR CAA 90 bp AAACTTCTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACATACTGCATCAAGTaGCTGAATTTCCTATGGCAA +
Preference number: 3 (lower is better)
Translates to: KLLTTQLLSEQVCSAPGCTYCIK*LNFLWQ
Trigger: TTGCCATAGGAAATTCAGCAACTTGATGCAGTATGT...GCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp TTTGCAAAGGAAACTTCTCACCACCCAGTTACTTTCTaGACAGGTGTGTTCTGCACCAGGATGCACAGAATT +
Preference number: 3 (lower is better)
Translates to: FAKETSHHPVTF*TGVFCTRMHRI
Trigger: AATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTTCCTTTGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CCA 72 bp TGTTATGTAACCATGAATTTACAACTAACACCCATATaGGGCTGGCCTGCCTGTGAATCACCATTGCCTTCA +
Preference number: 3 (lower is better)
Translates to: CYVTMNLQLTPI*GWPACESPLPS
Trigger: TGAAGGCAATGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTGTAAATTCATGGTTACATAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp TTGCACACATTGCAAATCCATATTCTCTTCATGATGTaGAACATCTGGTATAAGCAAACTATTTGGGCATTC +
Preference number: 3 (lower is better)
Translates to: LHTLQIHILFMM*NIWYKQTIWAF
Trigger: GAATGCCCAAATAGTTTGCTTATACCAGATGTTTCACATCATGAAGAGAATATGGATTTGCAATGTGTGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR TCA 72 bp TGTACATTCCGGAAGAAAATGTCATTTAGTGATTCTTaGTGGCCACAAATGGTATTTGCAAAGGAAACTTCT +
Preference number: 3 (lower is better)
Translates to: CTFRKKMSFSDS*WPQMVFAKETS
Trigger: AGAAGTTTCCTTTGCAAATACCATTTGTGGCCATCAAGAATCACTAAATGACATTTTCTTCCGGAATGTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CGATGCCCTCTCCCTGAGGATGGGGCCTTCCCACCCCCGCACAGGTGGGCCCAGTTCACCTCGGCCCCGTaGACAGAGCTGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RCPLPEDGAFPPPHRWAQFTSAP*TELVGR
Trigger: CCTCCCCACCAGCTCTGTGCACGGGGCCGAGGTGAA...CTGGGCCCACCTGTGCGGGGGTGGGAAGGCCCCATCCTCAGGGAGAGGGCATCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CGATGCCCTCTCCCTGAGGATGGGGCCTTCCCACCCCCGCACAGGTGGGCCCAGAGTAGCCCACTGGGGTaGGTCCAAGGGCTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: RCPLPEDGAFPPPHRWAQSSPLG*VQGLPL
Trigger: AAGCGGGAGCCCTTGGACTCACCCCAGTGGGCTACT...CTGGGCCCACCTGTGCGGGGGTGGGAAGGCCCCATCCTCAGGGAGAGGGCATCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCACCGGAGGCACAGGCATaGGGCCCTGGCGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAAPEAQA*GPGGNL
Trigger: CAGGTTCCCGCCAGGGCCCCATGCCTGTGCCTCCGG...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTGGGGTGGCTGCAGCTaGCAGTGCCCACGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: PGLVQREASAPESGCAACWGGCS*QCPRVS
Trigger: AGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCA...GCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACATGGCCCAGTGGAGCTaGCGGCAGAAGTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDMAQWS*RQKSWR
Trigger: CCGCCAGGACTTCTGCCGGCAGCTCCACTGGGCCAT...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCAAAGGGGTCAGCTCCCTaGTGCGCCCAGCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAAKGSAP*CAQQWP
Trigger: GGGCCACTGCTGGGCGCAGCAGGGAGCTGACCCCTT...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGGCCGCGGCGGGAGCATaGCTCCTGACGGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: GSPHHKTGRANTHVLSAAAAAGA*LLTAPS
Trigger: AGAAGGCGCCGTCAGGAGCCATGCTCCCGCCGCGGC...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGGGCTGGAGTAGGCACTaGGGGACGGGCTCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGGWSRH*GTGSAG
Trigger: ACCCGCCGAGCCCGTCCCCCAGTGCCTACTCCAGCC...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACCACAGTGCAGCGGGGTaGTGGGTCCCTCACCCATGG +
Preference number: 4 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDHSAAG*WVPHPW
Trigger: CCATGGGTGAGGGACCCACCACCCCGCTGCACTGTG...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp AGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGTACGTCTCAGGGCCTaGGTGTCCAATGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: SPGSCSGRPQLLSRAVLHVRLRA*VSNARG
Trigger: GCCCCGAGCATTGGACACCCAGGCCCTGAGACGTAC...ATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCAGGGAGCGCCCTGGCCCCTGAGCAGCCCCACTaGCCTCTCCTACTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: STLQATNPTRPQPGSALAPEQPH*PLLLRK
Trigger: CTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGG...GGCCAGGGCGCTCCCTGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GTGACACAGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGCCTGAGCAGCCCCACTaGCCTCTCCTACTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: VTQREPGLVQREASAPESPEQPH*PLLLRK
Trigger: CTTCCGCAGTAGGAGAGGCCAGTGGGGCTGCTCAGG...CGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCTGTGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTGTCCAGCTTGGAGATaGTGTCAGGCGGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: PGLVQREASAPESGCAACCPAWR*CQAGTA
Trigger: TGCCGTTCCCGCCTGACATCATCTCCAAGCTGGACA...GCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGCACTCCCAGTGGAGCTaGCGTCAGGGCGCCGATGCC +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGHSQWS*RQGADA
Trigger: GGCATCGGCGCCCTGACGTCAGCTCCACTGGGAGTG...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCAGCGGGCCTCTGTTTCTaGAGGGGCCTCCTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAAAGLCF*RGLLRF
Trigger: GAAGCGGAGGAGGCCCCTGCAGAAACAGAGGCCCGC...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACTGGCAGAGGGGAGGGTaGACCTGGTCCTCACCGACA +
Preference number: 4 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDWQRGG*TWSSPT
Trigger: TGTCGGTGAGGACCAGGTGCACCCTCCCCTCTGCCA...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCATGGGCTGACCCTGCCTaGACAGCACAGGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAAWADPA*TAQAGS
Trigger: GCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCA...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CGATGCCCTCTCCCTGAGGATGGGGCCTTCCCACCCCCGCACAGGTGGGCCCAGAAAGGTCTGGGAGGCTaGAGGGCAGGACGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: RCPLPEDGAFPPPHRWAQKGLGG*RAGRGE
Trigger: TTCACCACGTCCTGCCCTGCAGCCTCCCAGACCTTT...CTGGGCCCACCTGTGCGGGGGTGGGAAGGCCCCATCCTCAGGGAGAGGGCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTGTCCCAGCAAGTGGGTaGTGGATGGGCGAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: PGSCSGRPQLLSRAVLHAVPASG*WMGECA
Trigger: AGCACACTCGCCCATCCAGCACCCACTTGCTGGGAC...AGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGCACAGTGCGGCGGGGTaGTGGGTCCCTAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: GSPHHKTGRANTHVLSAAHSAAG*WVPRGG
Trigger: ACCACCCCTAGGGACCCACCACCCCGCCGCACTGTG...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTAGATGCAGACCGAACTaGGTACGTCTCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PGSCSGRPQLLSRAVLHARCRPN*VRLRAW
Trigger: CCAGGCCCTGAGACGTACTCAGTTCGGTCTGCATCT...AGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACTTCCTGAAAGTGCCCTaGACACACGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDFLKVP*THGQGR
Trigger: CCTGCCCTGCCCGTGTGTCCAGGGCACTTTCAGGAA...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCAGTGCACCCCGAAGCTTaGGGCGGGACCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSVHPEA*GGTSVA
Trigger: GGCCACGCTGGTCCCGCCCCAAGCTTCGGGGTGCAC...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGCCCCGACTGTGGACTTaGCAGCCATGGGACGGGTGC +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGPRLWT*QPWDGC
Trigger: GCACCCGTCCCATGGCTGCCAAGTCCACAGTCGGGG...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGGTCCAACTCGGCGTTaGGGCGGTCCCGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: EAASQKGVPASGCWMGECGPTRR*GGPGVA
Trigger: AGCGACACCGGGACCGCCTCAACGCCGAGTTGGACC...ACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCACTCTCCACAGGTGACTaGCCCTCAGGTGGCTGGTCA +
Preference number: 4 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAALSTGD*PSGGWS
Trigger: TGACCAGCCACCTGAGGGTCAGTCACCTGTGGAGAG...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCATGGCCCAGTGGAGCTaGCGGCAGAAGTCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAMAQWS*RQKSWR
Trigger: CCGCCAGGACTTCTGCCGGCAGCTCCACTGGGCCAT...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCAGTACTCGGTGGGCGTaGCTGTGCCCCACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPASTRWA*LCPTPG
Trigger: CCCAGGAGTGGGGCACAGGCACGCCCACCGAGTACT...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCAGCACCATCCTCACTGTaGTTTCCCGCTGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAAAPSSL*FPAVQG
Trigger: GCCCTGGACAGCGGGAAAGCACAGTGAGGATGGTGC...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCAGGGCGGGTCATTCTTaGTGGGCTGCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPARAGHS*WAAASA
Trigger: GGCCGAGGCTGCAGCCCAGCAAGAATGACCCGCCCT...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACCCGTCGGCATCCCCCTaGCCCGCATCGCGACCGTGG +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHPSASP*PASRPW
Trigger: CCACGGTCGCGATGCGGGGCAGGGGGATGCCGACGG...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR GCA 90 bp AGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATCACATCTTCGGCATCTaGCACTGCCAACCCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SPGSCSGRPQLLSRAVLHHIFGI*HCQPLG
Trigger: TCCAAGGGGTTGGCAGTGGCAGATGCCGAAGATGTG...ATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR CCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCAGGCCGAGTACTCGGTaGGCGTGCCTGTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPARPSTR*ACLCPT
Trigger: AGTGGGGCACAGGCACGCCCACCGAGTACTCGGCCT...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCACAGGCATGGGGCCCTaGCGGGAACCTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPATGMGP*REPVPI
Trigger: GATGGGCACAGGTTCCCGCCAGGGCCCCATGCCTGT...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCGCGGGTCATTCTTGCTaGGCTGCAGCCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAAGHSC*AAASAW
Trigger: CCAGGCCGAGGCTGCAGCCCAGCAAGAATGACCCGC...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCCCCGCATGGGTCTGCTaGTCCGGCTGGAGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAPAWVC*SGWSRH
Trigger: GTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGG...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp CGATGCCCTCTCCCTGAGGATGGGGCCTTCCCACCCCCGCACAGGTGGGCCCAGCAGATAAGGGAGAGATaGCAGTGGAAGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: RCPLPEDGAFPPPHRWAQQIRER*QWKAMS
Trigger: GCTCATGGCCTTCCACTGCCATCTCTCCCTTATCTG...CTGGGCCCACCTGTGCGGGGGTGGGAAGGCCCCATCCTCAGGGAGAGGGCATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACCCCAGTGACAGCCGTTaGCTCCAGGACACTCAAGAC +
Preference number: 4 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDPSDSR*LQDTQD
Trigger: GTCTTGAGTGTCCTGGAGCCAACGGCTGTCACTGGG...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CAGATGAGTGAGCGGTCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCAGGGGGTCCCAGCAAGTaGGTGCTGGATGGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: QMSERSTLQATNPTRPQPGGPSK*VLDGRV
Trigger: CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCC...TGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCACTCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGCCACAGCTCTCCCCAGTaGCCTAGGAGGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: PSGRIQCAVHAQGVFLSSHSSPQ*PRRHQE
Trigger: CTCCTGATGCCTCCTAGGCCACTGGGGAGAGCTGTG...GCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 72 bp CCACCACTCAATCTGGCACCTGTCACCAGGAGGGCCTaGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PPLNLAPVTRRA*GRGASKGLGGC
Trigger: GCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGGTGCCAGATTGAGTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGCCAACACCCACGTGCTaGGTGCAGCGTCAACACAGC +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGPTPTC*VQRQHS
Trigger: GCTGTGTTGACGCTGCACTCAGCACGTGGGTGTTGG...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACCATCCGCTCCGTGGCTaGACCGCGGGGTGGGCGTTG +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHHPLRG*TAGWAL
Trigger: CAACGCCCACCCCGCGGTTCAGCCACGGAGCGGATG...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR TCA 90 bp AAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGCCCAGGGAGTCTTCCTaGGCAGCCCCACTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: KQQVRRGSQQVGAGWASVPRESS*AAPLAS
Trigger: AGAGGCCAGTGGGGCTGCTCAGGAAGACTCCCTGGG...CACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp AGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCACCCAGTTACTTTCTaGACAGGTGTGTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: RGSPGSCSGRPQLLSRAVHPVTF*TGVFCT
Trigger: GGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTG...CACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGCGCCGGCCGCAGGCTaGCGTGAGCTCTGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSAPAAG*RELCSC
Trigger: GCAGGAGCAGAGCTCACGGCAGCCTGCGGCCGGCGC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCTCAGGAAGCCCGAGGTaGTGTCCAGCAGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPASGSPR*CPAGSA
Trigger: TGCGCTGCCTGCTGGACAGCACCTCGGGCTTCCTGA...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGGGGGAGGAGAACGGGTaGCGCAATGCAGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: GSPHHKTGRANTHVLSAAGEENG*RNAEQR
Trigger: TCGCTGTTCTGCATTGCGGCACCCGTTCTCCTCCCC...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGTGCATCCGCGGTGGCTaGGGTGTCTGCTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GSPHHKTGRANTHVLSAACIRGG*GVCSGF
Trigger: AAACCCAGAGCAGACACCGCAGCCACCGCGGATGCA...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CCTGTCACCAGGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCTCACTCCAGAGGCCCTaGTCAGCATCCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: PVTRRALGRGASKGLGGCSLQRP*SASCAA
Trigger: AGCAGCACAGGATGCTGAGCAGGGCCTCTGGAGTGA...GCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCCATCCCGCATGGGTCTaGTGGTCCGGCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAHPAWV*WSGWSR
Trigger: CCTACTCCAGCCGGACCAGCAGACCCATGCGGGATG...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGACGCCGTGCCCCAGGTaGGAGATGTACACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGTPCPR*EMYTCC
Trigger: GCAACAGGTGTACATCTCGCACCTGGGGCACGGCGT...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGACCGTGGGGGCACCTaGAGCGCAACAGCCTCGCCC +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGDRGGT*SATASP
Trigger: GGGCGAGGCTGTTGCGCTGCAGGTGCCCCCACGGTC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR GCA 90 bp GAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGGATACAGTGCGCGGTaGACGCCCAGGGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: EASAPESGCAACSPSCRSGYSAR*TPRESS
Trigger: GGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCC...AGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GGCCTCTCCTACTGCGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCTGCCCTCGTCACACGCTCGTCCTaGAGAGGAAACACACCCTGG +
Preference number: 4 (lower is better)
Translates to: GLSYCGRGHRALTESSALVTRSS*RGNTPW
Trigger: CCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGAC...GAGGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GTGACACAGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGTCTGCAAGGAGCATGTaGCTCAGCCTTGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VTQREPGLVQREASAPESSARSM*LSLAKQ
Trigger: CTGCTTTGCAAGGCTGAGGCACATGCTCCTTGCAGA...CGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCTGTGTCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCCCTGGGGAGGGTCCATaGCCCAGTGGAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGPGEGP*PSGAAG
Trigger: GCCGGCAGCTCCACTGGGCCATGGACCCTCCCCAGG...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACCCTGGGGAGGGTCCATaGCCCAGTGGAGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHPGEGP*PSGAAG
Trigger: GCCGGCAGCTCCACTGGGCCATGGACCCTCCCCAGG...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGCCGCGGCGGGAGCATaGCTCCTGACGGCGCCTTCT +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGAAAGA*LLTAPS
Trigger: AGAAGGCGCCGTCAGGAGCCATGCTCCCGCCGCGGC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCACCCGCATGGGTCTGCTaGTCCGGCTGGAGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSPAWVC*SGWSRH
Trigger: GTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGG...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCCCTCGGCCCCGAGACTaGAAGAGCAGCTGCCACGTT +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAPRPRD*KSSCHV
Trigger: AACGTGGCAGCTGCTCTTCCAGTCTCGGGGCCGAGG...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGTCACCAGGAGGGCCTTaGGCAGGGGCGCATCTAAAG +
Preference number: 4 (lower is better)
Translates to: GSPHHKTGRANTHVLSAASPGGP*AGAHLK
Trigger: CTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGA...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGCGCCAACCCCTGTCCTTaGAAGAAGCTCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: PSGRIQCAVHAQGVFLSSANPCP*KKLFTR
Trigger: CCGGGTGAAGAGCTTCTTCCAAGGACAGGGGTTGGC...GCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515206.6
CDS-3UTR CCA 90 bp TCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCAGGGAGCGCCCTGGCCCTCTACCCACAGGTATaGATGCTGCCTCGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: STLQATNPTRPQPGSALALYPQV*MLPRLS
Trigger: TGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAG...GGCCAGGGCGCTCCCTGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGTTCCAGCGAAGACTGGGGTaGCTGCAGCTGGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: PQLLSRAVLHARLAVGLFQRRLG*LQLAVP
Trigger: GGGCACTGCCAGCTGCAGCCACCCCAGTCTTCGCTG...GAACAGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACTCAGGAGCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp AAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGTGCCCCTTCAGGCTGTaGGCAGGAGGGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: KQQVRRGSQQVGAGWASVCPFRL*AGGDQD
Trigger: GTCCTGGTCCCCTCCTGCCCACAGCCTGAAGGGGCA...CACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGCGTCAGTCTGTTCCCTaGGCACCAAAACGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGRQSVP*APKRRS
Trigger: AGAGCGGCGTTTTGGTGCTCAGGGAACAGACTGACG...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGGACGGGCTCGGCGGGTaGGAGATGGGCGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKDGLGG*EMGEFL
Trigger: CAGGAACTCGCCCATCTCTCACCCGCCGAGCCCGTC...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TGGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGCATGCTCGGGGCCTCCTaGACGACATGGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: WGGCSWQCPRVSLVKRMRMLGAS*TTWAFV
Trigger: AACGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCAT...GCGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGTCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCA +
Preference number: 4 (lower is better)
Translates to: CSPSCRSVHLQGACASALSGPRT*TPPAGS
Trigger: TGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGA...CAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCGGGGTTGGACTTCTCTaGCCCCACGGCGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCGVGLL*PHGGPL
Trigger: CAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCC...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCTGCATCCGCGGTGGCTaGGGTGTCTGCTCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPACIRGG*GVCSGF
Trigger: AAACCCAGAGCAGACACCGCAGCCACCGCGGATGCA...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCGCACCATCCTCACTGTaGTTTCCCGCTGTCCAGGGC +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAAPSSL*FPAVQG
Trigger: GCCCTGGACAGCGGGAAAGCACAGTGAGGATGGTGC...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCAAGGGGTCAGCTCCCTaGTGCGCCCAGCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGKGSAP*CAQQWP
Trigger: GGGCCACTGCTGGGCGCAGCAGGGAGCTGACCCCTT...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGGCGCCATGGAGCACCTaGCGCACGGTGTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKAPWST*RTVWGS
Trigger: ACTGCCCCACACCGTGCGGCAGGTGCTCCATGGCGC...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCACTCCTGGGCAGGGGCTaGCGTCTGTGCTTAAGGAGG +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSLLGRG*RLCLRR
Trigger: CCTCCTTAAGCACAGACGGCAGCCCCTGCCCAGGAG...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTACCCACAGGTATGGATaGTGCCTCGCTTGTCAACTT +
Preference number: 4 (lower is better)
Translates to: PGSCSGRPQLLSRAVLHATHRYG*CLACQL
Trigger: AAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGT...AGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CCTCGCTTGTCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCGGGAGCCCGGGCTCGTaGAGCGGGAGGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: PRLSTFTSTRSASSAVRVGSPGS*SGRPQL
Trigger: GAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCC...GACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCACCAGGACACAGGACGTaGCTGGCCCTCAGAACAGGG +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSPGHRT*LALRTG
Trigger: CCCTGTTCTGAGGGCCAGCCACGTCCTGTGTCCTGG...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CCTGGCCCACACCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTCAAGTGGGTGCTGGATaGGCGAGTGTGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PGPHPQAGYSARCTPRESQVGAG*ASVLPK
Trigger: TTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG...AGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGGTGTGGGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTGTCCCAGAAAACAGCTaGTACCAGGTTAGGGGGTTA +
Preference number: 4 (lower is better)
Translates to: PGSCSGRPQLLSRAVLHAVPENS*YQVRGL
Trigger: TAACCCCCTAACCTGGTACCAGCTGTTTTCTGGGAC...AGCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGGTCCAACTCGGCGTTaGGGCGGTCCCGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSGPTRR*GGPGVA
Trigger: AGCGACACCGGGACCGCCTCAACGCCGAGTTGGACC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATGGCCGCAGGCTGCCGTaGGCTCTGCTCCTGCACGAC +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDGRRLP*ALLLHD
Trigger: GTCGTGCAGGAGCAGAGCTCACGGCAGCCTGCGGCC...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTGTATTAACAGAGTGTaGGGGAATGCATTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: PGLVQREASAPESGCAACCINRV*GNAFEV
Trigger: CACCTCGAATGCATTCCCTCACACTCTGTTAATACA...GCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp TCTCAGGGCCTGGGTGTCCAATGCTCGGGGCCTCCTGAACGACATGGGCCTTCGAGTGTGAGAAGCGGATaGCTGTGCCGTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: SQGLGVQCSGPPERHGPSSVRSG*LCRAAL
Trigger: AAGAGCAGCACGGCACAGTCATCCGCTTCTCACACT...CGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCATTGGACACCCAGGCCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR TCA 90 bp CCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGCGAGCATTCAGGCAGGTaGCAAAGACTCAGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: PSGRIQCAVHAQGVFLSSEHSGR*QRLRAK
Trigger: CTTCGCTCTGAGTCTTTGTCACCTGCCTGAATGCTC...GCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACTCCAAGGGCGGGGGCTaGCCAAACACCACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHSKGGG*PNTTWG
Trigger: TCCCCAGGTGGTGTTTGGGCAGCCCCCGCCCTTGGA...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGGGCTCCTGCGTATGCTaGACACACACACTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGGSCVC*THTLAD
Trigger: GTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCC...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACCAGCCATGGGACGGGTaGTCGCTGCCTCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHQPWDG*SLPLGH
Trigger: ATGCCCCAGAGGCAGCGAGCACCCGTCCCATGGCTG...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACACGTCAGGGCGCCGATaGCCTCTCCCTGAGGATGGG +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHTSGRR*PLPEDG
Trigger: CCCATCCTCAGGGAGAGGGCATCGGCGCCCTGACGT...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CTGGCCTCTCCTACTGCGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCTGCCCCACATCAACGAGGAGTaGCAGCTCAGCTGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: LASPTAEEGTEPSLSPLPHINEE*QLSCQS
Trigger: ACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTG...GGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGTTCGTGAGCGGTCAACACTaGAGGCCACTAACCCCACGC +
Preference number: 4 (lower is better)
Translates to: PQLLSRAVLHARLAVGLFVSGQH*RPLTPR
Trigger: GCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCAC...GAACAGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACTCAGGAGCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CTGGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGGGGACAGACACTCTGTaGCAGAGCGTGGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: LGWLQLAVPTRFSGQENAGTDTL*QSVGQA
Trigger: TGCTTGTCCCACGCTCTGGCACAGAGTGTCTGTCCC...CGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp AGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATTGTTCTGCACCAGGATaGACAGAATTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SPGSCSGRPQLLSRAVLHCSAPG*TEFVPA
Trigger: AGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACA...ATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGGGTCCATGGCCCAGTaGAGCTGCCGGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGGSMAQ*SCRQKS
Trigger: GGACTTCTGCCGGCAGCTCCACTGGGCCATGGACCC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGAGGCCGAGTACTCGGTaGGCGTGCCTGTGCCCCACT +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKRPSTR*ACLCPT
Trigger: AGTGGGGCACAGGCACGCCCACCGAGTACTCGGCCT...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGACAGGCATGGGGCCCTaGCGGGAACCTGTGCCCATC +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKTGMGP*REPVPI
Trigger: GATGGGCACAGGTTCCCGCCAGGGCCCCATGCCTGT...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGCCGGAGGCACAGGCATaGGGCCCTGGCGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMPEAQA*GPGGNL
Trigger: CAGGTTCCCGCCAGGGCCCCATGCCTGTGCCTCCGG...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGGGCTGGAGTAGGCACTaGGGGACGGGCTCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMGWSRH*GTGSAG
Trigger: ACCCGCCGAGCCCGTCCCCCAGTGCCTACTCCAGCC...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGGTCTGCTGGTCCGGCTaGAGTAGGCACTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKVCWSG*SRHWGT
Trigger: CGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGAC...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCAGGGGAGGGTGCACCTaGTCCTCACCGACATCCCGC +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGRGGCT*SSPTSR
Trigger: GCGGGATGTCGGTGAGGACCAGGTGCACCCTCCCCT...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGGGGAAGGCCGTCTGTaGGCTCCAGGCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGGEGRL*APGRHS
Trigger: ACTGTGCCTGCCTGGAGCCCACAGACGGCCTTCCCC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCCGTGCACAGAGCTGGTaGGGAGGCTCCGACTGGGGA +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGRAQSW*GGSDWG
Trigger: TCCCCAGTCGGAGCCTCCCCACCAGCTCTGTGCACG...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCTGGCCAAGGCACTTTTaGGCAACATCCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAWPRHF*ATSRAP
Trigger: TGGTGCCCGGGATGTTGCCCAAAAGTGCCTTGGCCA...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGAGTGCGGCGGGGTGGTaGGTCCCTAGGGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMSAAGW*VPRGGG
Trigger: CCCACCACCCCTAGGGACCCACCACCCCGCCGCACT...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp TCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCAGGGAGCGCCCTGGCCACTACAGGCGGTCAGTaGCTATCAGTCCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: STLQATNPTRPQPGSALATTGGQ*LSVLQY
Trigger: ATATTGCAGGACTGATAGCCACTGACCGCCTGTAGT...GGCCAGGGCGCTCCCTGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCCAGCGAAGACTGGGGTaGCTGCAGCTGGCAGTGCCC +
Preference number: 4 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCQRRLG*LQLAVP
Trigger: GGGCACTGCCAGCTGCAGCCACCCCAGTCTTCGCTG...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp AAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGCCAGCAAGTGGGTGCTaGATGGGCGAGTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: KQQVRRGSQQVGAGWASVPASGC*MGECAS
Trigger: GGAAGCACACTCGCCCATCCAGCACCCACTTGCTGG...CACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp AGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGCTCTGTGCCAGAGCGTaGGACAAGCACAGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: RSSKSEGGPSKWVLDGRVLCARA*DKHSSP
Trigger: GGGAGAGCTGTGCTTGTCCCACGCTCTGGCACAGAG...CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 72 bp AAGAACCAGGCCACTGAGAGGCGCAGGCACCTGGCATaGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGG +
Preference number: 4 (lower is better)
Translates to: KNQATERRRHLA*GRRPSPANQTW
Trigger: CCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCCTCTCAGTGGCCTGGTTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGAGCGCACACGGCAGATaGAGCAGCGGGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKSAHGR*SSGSGR
Trigger: CCTTCCTGACCCGCTGCTTCATCTGCCGTGTGCGCT...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACAGTAGCCCACTGGGGTaGGTCCAAGGGCTCCCGCTT +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHSSPLG*VQGLPL
Trigger: AAGCGGGAGCCCTTGGACTCACCCCAGTGGGCTACT...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGCCGATGCCCTCTCCCTaGGGATGGGGCCTTCCCACC +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMPMPSP*GWGLPT
Trigger: GGTGGGAAGGCCCCATCCTCAGGGAGAGGGCATCGG...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TGGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGCAGGTGTACAGATGAGTaGGCGGTCAACACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: WGGCSWQCPRVSLVKRMRRCTDE*AVNTAG
Trigger: GCCTGCAGTGTTGACCGCTCACTCATCTGTACACCT...GCGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp AGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATCCTCACAGTGCAAAATaGACCGCAAAGAAATGCACT +
Preference number: 4 (lower is better)
Translates to: SPGSCSGRPQLLSRAVLHPHSAK*TAKKCT
Trigger: AGTGCATTTCTTTGCGGTTCATTTTGCACTGTGAGG...ATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CTGGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGAGTGTGAGAAGCGGATaGCTGTGCCGTGCTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LGWLQLAVPTRFSGQENASVRSG*LCRAAL
Trigger: AAGAGCAGCACGGCACAGTCATCCGCTTCTCACACT...CGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGCCTCTAACCACTTTCGGAGGCCTCAGCTCCTaGGTCGGGCTGTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: LAVPTRFSGQENAPLTTFGGLSS*VGLCCM
Trigger: CATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCC...GAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCAGGAAGCCCGAGGTaGTGTCCAGCAGGCAGCGCA +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGSGSPR*CPAGSA
Trigger: TGCGCTGCCTGCTGGACAGCACCTCGGGCTTCCTGA...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGGGCACACAGCCGTCTaGAGCACCCTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGGHTAV*STLTPR
Trigger: TCTGGGTGTGAGGGTGCTGCAGACGGCTGTGTGCCC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGGGCTCTGTTTTCAGGTaGATCCTGGTAGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGGSVFR*ILVGKV
Trigger: CACCTTCCCTACCAGGATGCACCTGAAAACAGAGCC...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCGTCTTCACAGGTGCCTaGTCTCCACAGGTGACTGAC +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAVFTGA*SPQVTD
Trigger: GTCAGTCACCTGTGGAGAGCAGGCACCTGTGAAGAC...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACCAACACAGCGTGGCCTaGCTGGCAGCAACCCACCAC +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHQHSVA*LAATHH
Trigger: GTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTTCGGGCTGTGCTGCATaGTCGCCTAGCTGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: EAASQKGVPASGCWMGECSGCAA*SPSCRS
Trigger: AGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGA...ACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GGTCACCAGAGTCACACGCTCGTCCTGCAGAGGAAACACACCCTGGCCTTGGAAGGTCCCGGTGTCGCTTaGAGGGGTTGGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GHQSHTLVLQRKHTLALEGPGVA*RGWTSL
Trigger: CAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACC...TTCCAAGGCCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGACTCTGGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTGCCGGCAGAAGTCCTaGCGGTCGTCCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGCRQKS*RSSTWM
Trigger: CATCCACGTGGACGACCGCCAGGACTTCTGCCGGCA...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACGGGCTTTGTGGGTCCTaGAGTCTCCCTCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHGLCGS*SLPPPC
Trigger: ACAGGGCGGAGGGAGACTCCAGGACCCACAAAGCCC...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGGGCTTTGTGGGTCCTaGAGTCTCCCTCCGCCCTGT +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGGLCGS*SLPPPC
Trigger: ACAGGGCGGAGGGAGACTCCAGGACCCACAAAGCCC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCAGGGCAGGGGCTTTGTaGGTCCTGGAGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGRAGAL*VLESPS
Trigger: GGAGGGAGACTCCAGGACCCACAAAGCCCCTGCCCT...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGTGGGGAGGCTCCGACTaGGGAAGGCCGTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMWGGSD*GRPSVG
Trigger: GCCCACAGACGGCCTTCCCCAGTCGGAGCCTCCCCA...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGAGATCTGAGCTTGGATaGTGGTCACTGCGCTATGGC +
Preference number: 4 (lower is better)
Translates to: GSPHHKTGRANTHVLSAARSELG*WSLRYG
Trigger: GCCATAGCGCAGTGACCACCATCCAAGCTCAGATCT...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGGGTGCTCGCTGCCTCTaGGGCATGAAGCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKGARCL*GMKLSS
Trigger: GCTGGACAGCTTCATGCCCCAGAGGCAGCGAGCACC...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGTCTGTCATGGCGCCATaGAGCACCTGCCGCACGGTG +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKSVMAP*STCRTV
Trigger: CACCGTGCGGCAGGTGCTCCATGGCGCCATGACAGA...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGAGCAGCTGCCACGTTTaGGACCCAGGCGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMSSCHV*DPGGAQ
Trigger: CTGGGCGCCGCCTGGGTCCCAAACGTGGCAGCTGCT...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CAGATGAGTGAGCGGTCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCACTTCGTTCGCCCGTGTaGTCATCCACATCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: QMSERSTLQATNPTRPQPLRSPV*SSTSSA
Trigger: TGCCGAAGATGTGGATGACCACACGGGCGAACGAAG...TGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCACTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp AAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGGGCAAGTCCACCCTGTaGGACAAAGCTGCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: KQQVRRGSQQVGAGWASVGKSTL*DKAAPS
Trigger: TGAAGGGGCAGCTTTGTCCCACAGGGTGGACTTGCC...CACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp AGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGCCACTGCCAACCCCTTaGAAGAAGCTCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: RSSKSEGGPSKWVLDGRVPLPTP*KKLFTR
Trigger: CCGGGTGAAGAGCTTCTTCCAAGGGGTTGGCAGTGG...CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR TCA 90 bp GGCGCAGGCACCTGGCATTGGGCAGAAGACCCAGTCCTGCCAACCAAACCTGGGATGGGAACCCTCATTTaGGTGAACTGTACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAGTWHWAEDPVLPTKPGMGTLI*VNCTAS
Trigger: GCTGGCTGTACAGTTCACTCAAATGAGGGTTCCCAT...CCCAGGTTTGGTTGGCAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACACCAAACCTGGGTTTTaGCAAAGTGAAGGTGCGTTT +
Preference number: 4 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDTKPGF*QSEGAF
Trigger: AAACGCACCTTCACTTTGTCAAAACCCAGGTTTGGT...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGAAGACTCTCAGTCACTaGGCTCCCTGCCCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKKTLSH*APCPPR
Trigger: CCGAGGAGGGCAGGGAGCTCAGTGACTGAGAGTCTT...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCATGGTGTTTTTCCCAGTaGCAGCCGTTGGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSWCFSQ*QPLAPG
Trigger: TCCTGGAGCCAACGGCTGTCACTGGGAAAAACACCA...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCTCGCCTAGCTGTAGGTCTGTTCGGGCTGGCCTGCCTGTaGATCACCATTGCCTTCATT +
Preference number: 4 (lower is better)
Translates to: PQLLSRAVLHARLAVGLFGLACL*ITIAFI
Trigger: AATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCC...GAACAGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGACTCAGGAGCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAGGTGTACAGATGAGTaGGCGGTCAACACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QVRRGSQQVGAGWASVLPRCTDE*AVNTAG
Trigger: GCCTGCAGTGTTGACCGCTCACTCATCTGTACACCT...TGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGCCAACCAAATATTCAGTaGATCAGCGTGCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: PSGRIQCAVHAQGVFLSSQPNIQ*ISVRCT
Trigger: TGTGCACCGCACGCTGATTCACTGAATATTTGGTTG...GCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCAAAATGGGTGACGGTTaGCAGGCCGGGGCGGCTGTG +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSKMGDG*QAGAAV
Trigger: CACAGCCGCCCCGGCCTGGCAACCGTCACCCATTTT...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATTCCAAGGGCGGGGGCTaGCCAAACACCACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDSKGGG*PNTTWG
Trigger: TCCCCAGGTGGTGTTTGGGCAGCCCCCGCCCTTGGA...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGTCTGCTCTGGGTTTTaGCCTCAGGAGCGCGCTCCT +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGVCSGF*PQERAP
Trigger: AGGAGCGCGCTCCTGAGGGCAAAACCCAGAGCAGAC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCCAGGCAGGCACAGTGTaGAGGGTGGAAAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGQAGTV*RVERGQ
Trigger: CTGACCCCTTTCCACCCTGCACACTGTGCCTGCCTG...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCGCGCATGCACAGCTCTaGAAAGCGTGTGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAAHAQL*KACVLG
Trigger: TCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGC...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGCGCCAGTCCTCAGGTaGCTGGTCTTCACAGGTGCC +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSAPVLR*LVFTGA
Trigger: GGCACCTGTGAAGACCAGGCACCTGAGGACTGGCGC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGACTGGAAGAGCAGCTaGCACGTTTGGGACCCAGGC +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGDWKSS*HVWDPG
Trigger: GCCTGGGTCCCAAACGTGGCAGCTGCTCTTCCAGTC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCCACCCACGTGCTGAGTaGAGCGTCAACACAGCGTGG +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGHPRAE*SVNTAW
Trigger: CCACGCTGTGTTGACGCTGCACTCAGCACGTGGGTG...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CTGTGCCGTGCTGCTCTTGACACATGGGCGGGTGTATTAACAGAGTGTGAGGGAACTGGCCTCTCCTACTaGGGAAGAGGGCACCGAGCC +
Preference number: 4 (lower is better)
Translates to: LCRAALDTWAGVLTECEGTGLSY*GRGHRA
Trigger: GGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGT...TCCCTCACACTCTGTTAATACACCCGCCCATGTGTCAAGAGCAGCACGGCACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GAGTCCTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTTGTCAACTTTCTCAGGCAGGATACAGTaGGCGGTGCACGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ESSALYPQVWMLPRLSTFSGRIQ*AVHAQG
Trigger: TCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGA...GAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAGGACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CCTGCAGAGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCGTGAGCGGTCAACACTaGAGGCCACTAACCCCACGC +
Preference number: 4 (lower is better)
Translates to: PAEETHPGLGTPRYRGRCVSGQH*RPLTPR
Trigger: GCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCAC...GCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CAGATGAGTGAGCGGTCAACACTGCAGGCCACTAACCCCACGCGGCCACAGCCATCTGCAAGGAGCATGTaGCTCAGCCTTGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: QMSERSTLQATNPTRPQPSARSM*LSLAKQ
Trigger: CTGCTTTGCAAGGCTGAGGCACATGCTCCTTGCAGA...TGGCTGTGGCCGCGTGGGGTTAGTGGCCTGCAGTGTTGACCGCTCACTCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCCTGCGGTGTCTGCTCTaGGTTTTGCCCTCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGLRCLL*VLPSGA
Trigger: CGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAG...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGGTCTGCTGGTCCGGCTaGAGTAGGCACTGGGGGACG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMVCWSG*SRHWGT
Trigger: CGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGAC...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATAGGGGAGGGTGCACCTaGTCCTCACCGACATCCCGC +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDRGGCT*SSPTSR
Trigger: GCGGGATGTCGGTGAGGACCAGGTGCACCCTCCCCT...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGGCACAGTGTGCAGGGTaGAAAGGGGTCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKAQCAG*KGVSSL
Trigger: CAGGGAGCTGACCCCTTTCCACCCTGCACACTGTGC...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGGCGCATCTAAAGGTCTaGGAGGCTGCAGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKAHLKV*EAAGQD
Trigger: GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGC...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCAGCGTCAACACAGCGTaGCCTGCCTGGCAGCAACCC +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSSVNTA*PAWQQP
Trigger: GGGTTGCTGCCAGGCAGGCCACGCTGTGTTGACGCT...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACAGATGGGCGAGTTCCTaGAAGTGCCCTGGACACACG +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHRWASS*KCPGHT
Trigger: CGTGTGTCCAGGGCACTTTCAGGAACTCGCCCATCT...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATGGCAGTGGAAGGCCATaGGCACGTCTCACACCCACG +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDGSGRP*ARLTPT
Trigger: CGTGGGTGTGAGACGTGCTCATGGCCTTCCACTGCC...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATCCTGCTCTCCACAGGTaGCTGACCCTCAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDPALHR*LTLRWL
Trigger: CAGCCACCTGAGGGTCAGTCACCTGTGGAGAGCAGG...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACACGCAGCCACGTCTCTaGTTCGATCTTTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHTQPRL*FDLWGL
Trigger: CAGGCCCCAAAGATCGAATCAGAGACGTGGCTGCGT...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CCAGAAAACAGCTGGTACCAGGTTAGGGGGTTAAGACAGAATGCCCAGGAAGAGGCACCGAGCCCTCACTaGGTCCTCTGCCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: PENSWYQVRGLRQNAQEEAPSPH*VLCPLP
Trigger: GGGTAGAGGGCAGAGGACTCAGTGAGGGCTCGGTGC...CTCTTCCTGGGCATTCTGTCTTAACCCCCTAACCTGGTACCAGCTGTTTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CACACATCACTACAGGCGGTCAGTGGCTATCAGTCCTGCAATATTCACCATCAATCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCA +
Preference number: 4 (lower is better)
Translates to: HTSLQAVSGYQSCNIHHQSGPRT*TPPAGS
Trigger: TGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGA...TTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR GCA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTAGGGGTTGGACTTCTCTaGCCCCACGGCGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLGVGLL*PHGGPL
Trigger: CAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCC...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGCTATGGCAGGAATGTaGACCCCGAAGCTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSAMAGM*TPKLGA
Trigger: CGCCCCAAGCTTCGGGGTGCACATTCCTGCCATAGC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCACACACACTAGCAGACTaGGCATGCACAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSHTLAD*ACTALQ
Trigger: TTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGTGTG...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCTTCAGGATAGGCTCCTaGGTATGCTGCACACACACA +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAFRIGS*VCCTHT
Trigger: TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAA...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp AAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGCACATCAACGAGGAGTaGCAGCTCAGCTGTCAGAGT +
Preference number: 4 (lower is better)
Translates to: KQQVRRGSQQVGAGWASVHINEE*QLSCQS
Trigger: ACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTG...CACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TCTCAGGGCCTGGGTGTCCAATGCTCGGGGCCTCCTGAACGACATGGGCCTTCGCACAGGTATGGATGCTaGCTCGCTTGTCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: SQGLGVQCSGPPERHGPSHRYGC*LACQLS
Trigger: TGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTG...CGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCATTGGACACCCAGGCCCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR GCA 90 bp CTGGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGACCCACAGGTATGGATaGTGCCTCGCTTGTCAACTT +
Preference number: 4 (lower is better)
Translates to: LGWLQLAVPTRFSGQENATHRYG*CLACQL
Trigger: AAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGT...CGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GAGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAATCAGGCAGGATACAGTaGGCGGTGCACGCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EETHPGLGTPRYRGRCNQSGRIQ*AVHAQG
Trigger: TCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGA...TTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTTGTCAACTTTCACATCGGCTGCAGCTGGCAGTaGCCACGCGTTTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LCPLPTGMDAASLVNFHIGCSWQ*PRVSLV
Trigger: GACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCC...GATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACCCGGGGGCCTCAAGCAGGCTGGCCAGGTaGTCCAACTCGGCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SRECASNHFLRSQNPGASSRLAR*SNSALR
Trigger: CCTCAACGCCGAGTTGGACCACCTGGCCAGCCTGCT...TGAGGCCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCCTGCGGTGTCTGCTCTaGGTTTTGCCCTCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSLRCLL*VLPSGA
Trigger: CGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAG...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCCGCACAGACTGGTGGTaGCTTTTACTTTTGCATCCG +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPARTDWW*LLLLHP
Trigger: CGGATGCAAAAGTAAAAGCCACCACCAGTCTGTGCG...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTCACCGACATCCCGCATaGGTCTGCTGGTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSHRHPA*VCWSGW
Trigger: CCAGCCGGACCAGCAGACCCATGCGGGATGTCGGTG...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCCTGTTGCCGAGAGTCTaGCTCTGTTTTCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: QTAHAQLCKACVLGRAPALLPRV*LCFQVH
Trigger: ATGCACCTGAAAACAGAGCCAGACTCTCGGCAACAG...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTATGCTGCGCCCAGCAGTaGCCCTCCCATGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLCCAQQ*PSHGAE
Trigger: CTCAGCCCCATGGGAGGGCCACTGCTGGGCGCAGCA...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTGGGGCGGGACCAGCGTaGCCAAGGCACTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSGAGPA*PRHFWA
Trigger: TGCCCAAAAGTGCCTTGGCCACGCTGGTCCCGCCCC...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGTGGTCACTGCGCTATaGCAGGAATGTGCACCCCGA +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGVVTAL*QECAPR
Trigger: TCGGGGTGCACATTCCTGCCATAGCGCAGTGACCAC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCCCTCAGACTCTGTCATaGCGCCATGGAGCACCTGCC +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSPQTLS*RHGAPA
Trigger: GGCAGGTGCTCCATGGCGCCATGACAGAGTCTGAGG...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACGACACAGGACGTGGCTaGCCCTCAGAACAGGGAACT +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHDTGRG*PSEQGT
Trigger: AGTTCCCTGTTCTGAGGGCCAGCCACGTCCTGTGTC...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CACACATCACTACAGGCGGTCAGTGGCTATCAGTCCTGCAATATTCACCATCAAAGCCAGGGAGCGCCCTaGCCCACACCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: HTSLQAVSGYQSCNIHHQSQGAP*PTPSGR
Trigger: CCTGCCTGAGGGTGTGGGCCAGGGCGCTCCCTGGCT...TTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR CCA 90 bp AGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGAGAGGAAACACACCCTaGCCTTGGAACCCCACGTTA +
Preference number: 4 (lower is better)
Translates to: RSSKSEGGPSKWVLDGRVRGNTP*PWNPTL
Trigger: TAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCT...CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CATGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTCCAGCAAGTGGGTGCTaGATGGGCGAGTGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HARLAVGLFICKEHVPQPPASGC*MGECAS
Trigger: GGAAGCACACTCGCCCATCCAGCACCCACTTGCTGG...AGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAAAATAGCGGGGGTCCCAGCAAGTaGGTGCTGGATGGGCGAGTG +
Preference number: 4 (lower is better)
Translates to: HTLALEPHVIVEDATKNSGGPSK*VLDGRV
Trigger: CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCC...GCTATTTTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CCAGAAAACAGCTGGTACCAGGTTAGGGGGTTAAGACAGAATGCCCAGGAAGAGTGCCCCTTCAGGCTGTaGGCAGGAGGGGACCAGGAC +
Preference number: 4 (lower is better)
Translates to: PENSWYQVRGLRQNAQEECPFRL*AGGDQD
Trigger: GTCCTGGTCCCCTCCTGCCCACAGCCTGAAGGGGCA...CTCTTCCTGGGCATTCTGTCTTAACCCCCTAACCTGGTACCAGCTGTTTTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTAGGTCCAACTCGGCGTTaGGGCGGTCCCGGTGTCGCT +
Preference number: 4 (lower is better)
Translates to: VLHQDAQNLSQLLHRKGLGPTRR*GGPGVA
Trigger: AGCGACACCGGGACCGCCTCAACGCCGAGTTGGACC...TAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCAGCTGCTCCTTCCTGCTaGGTAATTGGGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSAAPSC*VIGFSM
Trigger: CATGGAAAACCCAATTACTCAGCAGGAAGGAGCAGC...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTAGTGGCCTGGGAGGGCTaGGCTAGGTGTGTCACCCGA +
Preference number: 4 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLVAWEG*ARCVTR
Trigger: TCGGGTGACACACCTAGCTCAGCCCTCCCAGGCCAC...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACAAATATAAGTTGTATTaGTCTCCTCCCTTCCATCCC +
Preference number: 4 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDKYKLY*SPPFHP
Trigger: GGGATGGAAGGGAGGAGATCAATACAACTTATATTT...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTTGTCAACTTTCACATCATGCTCGGGGCCTCCTaGACGACATGGGCCTTCGTT +
Preference number: 4 (lower is better)
Translates to: LCPLPTGMDAASLVNFHIMLGAS*TTWAFV
Trigger: AACGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCAT...GATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CCTGCAGAGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCGAAATGCACTTCCTCTaGGCCAGCGAAGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: PAEETHPGLGTPRYRGRCEMHFL*ASEDWG
Trigger: ACCCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTC...GCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTAGTACTCGGTGGGCGTaGCTGTGCCCCACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETSTRWA*LCPTPG
Trigger: CCCAGGAGTGGGGCACAGGCACGCCCACCGAGTACT...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGGGGGAGGAGAACGGGTaGCGCAATGCAGAACAGCGA +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMGEENG*RNAEQR
Trigger: TCGCTGTTCTGCATTGCGGCACCCGTTCTCCTCCCC...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGTCATTCTTGCTGGGCTaGAGCCTCGGCCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMSFLLG*SLGLAP
Trigger: TGGTGCCAGGCCGAGGCTGCAGCCCAGCAAGAATGA...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCAGAGATGTACACCTGTTaGCGAGAGTCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSEMYTC*RESGSV
Trigger: AACAGAGCCAGACTCTCGGCAACAGGTGTACATCTC...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATCAGGCAGGCACAGTGTaGAGGGTGGAAAGGGGTCAG +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDQAGTV*RVERGQ
Trigger: CTGACCCCTTTCCACCCTGCACACTGTGCCTGCCTG...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATACACGGGAGGCACAATaGACAGTGCAGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDTREAQ*TVQRGG
Trigger: ACCACCCCGCTGCACTGTGCATTGTGCCTCCCGTGT...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp AGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAAGGATACAGTGCGCGGTaGACGCCCAGGGAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RKHTLALEPHVIVEDATKGYSAR*TPRESS
Trigger: GGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCC...TTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp AGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGAAAACACTGTGCTGGTaGTGTTTAACAACCAAATAT +
Preference number: 4 (lower is better)
Translates to: RGSPGSCSGRPQLLSRAVKTLCW*CLTTKY
Trigger: ATATTTGGTTGTTAAACAGCACCAGCACAGTGTTTT...CACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CTGGCCTCTCCTACTGCGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCTGCCCAAACCCAAAACACTGTaGTGGTGCTGTTTAACAACC +
Preference number: 4 (lower is better)
Translates to: LASPTAEEGTEPSLSPLPKPKTL*WCCLTT
Trigger: GGTTGTTAAACAGCACCAGCACAGTGTTTTGGGTTT...GGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTGTGTCGCTTGGAGGGGTTaGACTTCTCTGCCCCCACGG +
Preference number: 4 (lower is better)
Translates to: QVGAGWASVLPKPLVTACVAWRG*TSLPPR
Trigger: CCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGAC...ACAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTTGCCCAAACACCACCTaGGGAGGGTCCATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSCPNTT*GGSMAQ
Trigger: CTGGGCCATGGACCCTCCCCAGGTGGTGTTTGGGCA...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGTTCCTGAAAGTGCCCTaGACACACGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMFLKVP*THGQGR
Trigger: CCTGCCCTGCCCGTGTGTCCAGGGCACTTTCAGGAA...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGGCACAGTGTGCAGGGTaGAAAGGGGTCAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMAQCAG*KGVSSL
Trigger: CAGGGAGCTGACCCCTTTCCACCCTGCACACTGTGC...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTGGGGAAGGCCGTCTGTaGGCTCCAGGCAGGCACAGT +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETGEGRL*APGRHS
Trigger: ACTGTGCCTGCCTGGAGCCCACAGACGGCCTTCCCC...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGTGGTCACTGCGCTATaGCAGGAATGTGCACCCCGA +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSVVTAL*QECAPR
Trigger: TCGGGGTGCACATTCCTGCCATAGCGCAGTGACCAC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGCAGGGCCTCACTGCCTaGCTTCCTCTTGCTTGGGGT +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMQGLTA*LPLAWG
Trigger: ACCCCAAGCAAGAGGAAGCCAGGCAGTGAGGCCCTG...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTAAGTGCAGCGGGGTGGTaGGTCCCTCACCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLSAAGW*VPHPWA
Trigger: AGCCCATGGGTGAGGGACCCACCACCCCGCTGCACT...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATGCAGGCACCTGGCATTaGGCAGAAGACCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDAGTWH*AEDPVL
Trigger: CAGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGC...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCCAGTCCTCAGGTGCCTaGTCTTCACAGGTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSQSSGA*SSQVPA
Trigger: AGCAGGCACCTGTGAAGACCAGGCACCTGAGGACTG...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CCTGGCCCACACCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTAACCCCACGTTATCGTaGAAGATGCAACCAAAAATA +
Preference number: 4 (lower is better)
Translates to: PGPHPQAGYSARCTPRESNPTLS*KMQPKI
Trigger: TATTTTTGGTTGCATCTTCCACGATAACGTGGGGTT...AGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGGTGTGGGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTGTTGGGGTGGCTGCAGCTaGCAGTGCCCACGCGTTTCT +
Preference number: 4 (lower is better)
Translates to: QVGAGWASVLPKPLVTACWGGCS*QCPRVS
Trigger: AGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCA...ACAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGTCCCAGAAAACAGCTaGTACCAGGTTAGGGGGTTA +
Preference number: 4 (lower is better)
Translates to: EAASQKGVPASGCWMGECVPENS*YQVRGL
Trigger: TAACCCCCTAACCTGGTACCAGCTGTTTTCTGGGAC...ACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCCGGGAGCATGGCTCCTaGCGGCGCCTTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSREHGS*RRLLLL
Trigger: CAGAAGAAGAAGGCGCCGTCAGGAGCCATGCTCCCG...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGAGATGGGCGAGTTCCTaGAAGTGCCCTGGACACACG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMRWASS*KCPGHT
Trigger: CGTGTGTCCAGGGCACTTTCAGGAACTCGCCCATCT...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCACTGTGGCGATGGGCTaGCCCTGCCTGCACAGCACA +
Preference number: 4 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSTVAMG*PCLHST
Trigger: TGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGT...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGTGACTTCTACACCCTaGTCTGATGCCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSVTSTP*SDACTS
Trigger: GCTGGTGCAGGCATCAGATCAGGGTGTAGAAGTCAC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GGGTCCCCACACCACAAAACCGGCAGAGCCAACACCCACGTGCTGAGTGCAGCGGTGGAACATGCATGTTaGTTGAGACTTTTTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSPHHKTGRANTHVLSAAVEHAC*LRLFQG
Trigger: TCCCTGAAAAAGTCTCAATCAACATGCATGTTCCAC...CGCTGCACTCAGCACGTGGGTGTTGGCTCTGCCGGTTTTGTGGTGTGGGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CTGCATGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGGCACAGGTGTACAGATaGGTGAGCGGTCAACACTGC +
Preference number: 4 (lower is better)
Translates to: LHARLAVGLFICKEHVPQAQVYR*VSGQHC
Trigger: GCAGTGTTGACCGCTCACTCATCTGTACACCTGTGC...CTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCATGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CCTCGCTTGTCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCGTGCCGTGCTGCTCTTaGCACATGGGCGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: PRLSTFTSTRSASSAVRVVPCCS*HMGGCI
Trigger: AATACACCCGCCCATGTGTCAAGAGCAGCACGGCAC...GACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp TCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCTCCATTTGTGGAGGCCTCAGCTCCTaGGTCGGGCTGTGCTGCATG +
Preference number: 4 (lower is better)
Translates to: STFTSTRSASSAVRVSICGGLSS*VGLCCM
Trigger: CATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCC...ACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTGGGGTTGGACTTCTCTaGCCCCACGGCGGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: YFLNRCVLHQDAQNLSQLGVGLL*PHGGPL
Trigger: CAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCC...AAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTGGCTGCCGTGAGCTCTaGTCCTGCACGACTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSGCREL*SCTTWK
Trigger: CTTCCAAGTCGTGCAGGAGCAGAGCTCACGGCAGCC...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCAAACGCCGCTCTCTCTaGTGCTCCTTCCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSKRRSL*CSFLLS
Trigger: ACTCAGCAGGAAGGAGCAGCAGAGAGAGCGGCGTTT...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGGCATCGGTACACCTTaGAGCTTCATGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGGIGTP*SFMSSM
Trigger: CATGGAGGACATGAAGCTGCAAGGTGTACCGATGCC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCCACACACTAGCAGACTaGGCATGCACAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGHTLAD*ACTALQ
Trigger: TTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGTGTG...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CCTGTCACCAGGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGAGAAATGCTGTCATaGTTGAATAGACTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: PVTRRALGRGASKGLGGCREMLS*LNRLKA
Trigger: GGCCTTAAGTCTATTCAAGCATGACAGCATTTCTCT...GCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGCCTGGTCTTCACAGGTaGCTGCTCTCCACAGGTGAC +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMPGLHR*LLSTGD
Trigger: GTCACCTGTGGAGAGCAGGCACCTGTGAAGACCAGG...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCAGGGGCTGCCGTCTGTaGTTAAGGAGGCCCCAGTGC +
Preference number: 4 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSRGCRL*LRRPQC
Trigger: GCACTGGGGCCTCCTTAAGCACAGACGGCAGCCCCT...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp AGAGAGCTTCAGAGATTTCACACTTCCTCACAGTGCAAAATGAACCGCAAAGAAGGGAGCCCGGGCTCGTaGAGCGGGAGGCCTCAGCTC +
Preference number: 4 (lower is better)
Translates to: RELQRFHTSSQCKMNRKEGSPGS*SGRPQL
Trigger: GAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCC...TTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTGAAATCTCTGAAGCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCACCGATTCGCACAGACTaGTGGTGGCTTTTACTTTTG +
Preference number: 4 (lower is better)
Translates to: QHSVACLAATHHSIWHLSPIRTD*WWLLLL
Trigger: CAAAAGTAAAAGCCACCACCAGTCTGTGCGAATCGG...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATTGGGATAGCCCCTCGTaGCAAAACGCTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDWDSPS*QNAELQ
Trigger: CTGGAGCTCAGCGTTTTGCCACGAGGGGCTATCCCA...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACAGATCTGAGCTTGGATaGTGGTCACTGCGCTATGGC +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHRSELG*WSLRYG
Trigger: GCCATAGCGCAGTGACCACCATCCAAGCTCAGATCT...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp CTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGCCTCTAACCACTTTCAACACACCCTGGCCTTaGAACCCCACGTTATCGTGG +
Preference number: 4 (lower is better)
Translates to: LAVPTRFSGQENAPLTTFNTPWP*NPTLSW
Trigger: CCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTT...GAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CCTGCAGAGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCCAAGTGGGTGCTGGATaGGCGAGTGTGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: PAEETHPGLGTPRYRGRCQVGAG*ASVLPK
Trigger: TTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG...GCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAAAATAGCCTCTGTGCCAGAGCGTaGGACAAGCACAGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: HTLALEPHVIVEDATKNSLCARA*DKHSSP
Trigger: GGGAGAGCTGTGCTTGTCCCACGCTCTGGCACAGAG...GCTATTTTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 72 bp CACACGCTCGTCCTGCAGAGGAAACACACCCTGGCCTaGGAACCCCACGTTATCGTGGAAGATGCAACCAAA +
Preference number: 4 (lower is better)
Translates to: HTLVLQRKHTLA*EPHVIVEDATK
Trigger: TTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGTAGACACACAGATCTaGGCTTGGATGGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGVDTQI*AWMVVT
Trigger: AGTGACCACCATCCAAGCTCAGATCTGTGTGTCTAC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGAACCCTCATTTGAGTaGACTGTACAGCCAGCCAGA +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGEPSFE*TVQPAR
Trigger: TCTGGCTGGCTGTACAGTTCACTCAAATGAGGGTTC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCCCAGGGAGTCTTCCTaGGCAGCCCCACTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: YFLNRCVLHQDAQNLSQLPRESS*AAPLAS
Trigger: AGAGGCCAGTGGGGCTGCTCAGGAAGACTCCCTGGG...AAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp AGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGCCTCACAGTGCAAAATaGACCGCAAAGAAATGCACT +
Preference number: 4 (lower is better)
Translates to: RSSKSEGGPSKWVLDGRVPHSAK*TAKKCT
Trigger: AGTGCATTTCTTTGCGGTTCATTTTGCACTGTGAGG...CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CAACTAACACCCATATGGGGCTGGCCTGCCTGTGAATCACCATTGCCTTCATTGGTGCCGTGCTGCTCTTaGCACATGGGCGGGTGTATT +
Preference number: 4 (lower is better)
Translates to: QLTPIWGWPACESPLPSLVPCCS*HMGGCI
Trigger: AATACACCCGCCCATGTGTCAAGAGCAGCACGGCAC...CAATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GAGTCCTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTTGTCAACTTTCGAGCATTCAGGCAGGTaGCAAAGACTCAGAGCGAAG +
Preference number: 4 (lower is better)
Translates to: ESSALYPQVWMLPRLSTFEHSGR*QRLRAK
Trigger: CTTCGCTCTGAGTCTTTGTCACCTGCCTGAATGCTC...GAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTATCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCA +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLSGPRT*TPPAGS
Trigger: TGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGA...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTACAGCACGGCAGACCCTaGAAGAGGACAGCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLQHGRP*KRTAVS
Trigger: GGAGACAGCTGTCCTCTTGCAGGGTCTGCCGTGCTG...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACGAGATGTACACCTGTTaGCGAGAGTCTGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHEMYTC*RESGSV
Trigger: AACAGAGCCAGACTCTCGGCAACAGGTGTACATCTC...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACTTCAGGATAGGCTCCTaGGTATGCTGCACACACACA +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHFRIGS*VCCTHT
Trigger: TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAA...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGGAACGCTCCAGCCGCTaGACCTTCTGGCCAATGTTT +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMERSSR*TFWPMF
Trigger: AAACATTGGCCAGAAGGTGCAGCGGCTGGAGCGTTC...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACGCCCGTTCCGTGCCTaGACACGGCATCCGCTCCGT +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRRPFRA*TRHPLR
Trigger: ACGGAGCGGATGCCGTGTGCAGGCACGGAACGGGCG...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAGCCTCGCCCGTTCCGTaGCTGCACACGGCATCCGCT +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRASPVP*LHTASA
Trigger: AGCGGATGCCGTGTGCAGGCACGGAACGGGCGAGGC...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR GCA 90 bp TCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTAGAGGCCTGGGTGTCCAATaGTCGGGGCCTCCTGAACGA +
Preference number: 4 (lower is better)
Translates to: SAPGCTEFVPASAQERFRGLGVQ*SGPPER
Trigger: TCGTTCAGGAGGCCCCGAGCATTGGACACCCAGGCC...TCTAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATTGCTCCTGCACGACTTaGAAGAAGCTCTTCACCCGG +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDCSCTT*KKLFTR
Trigger: CCGGGTGAAGAGCTTCTTCCAAGTCGTGCAGGAGCA...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGCTGTTGCCGAGAGTCTaGCTCTGTTTTCAGGTGCAT +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKLLPRV*LCFQVH
Trigger: ATGCACCTGAAAACAGAGCCAGACTCTCGGCAACAG...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGATGCTGCGCCCAGCAGTaGCCCTCCCATGGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRCCAQQ*PSHGAE
Trigger: CTCAGCCCCATGGGAGGGCCACTGCTGGGCGCAGCA...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACAGTGCACCCCGAAGCTTaGGGCGGGACCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTVHPEA*GGTSVA
Trigger: GGCCACGCTGGTCCCGCCCCAAGCTTCGGGGTGCAC...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCCTCTACAGTGCACTGTaGCGATGGGCTGACCCTGCC +
Preference number: 4 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSLYSAL*RWADPA
Trigger: GGCAGGGTCAGCCCATCGCCACAGTGCACTGTAGAG...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACAACGGCATCCGCTCCGTaGCTGAACCGCGGGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTTASAP*LNRGVG
Trigger: GCCCACCCCGCGGTTCAGCCACGGAGCGGATGCCGT...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACCCGCATCGCGACCGTaGGGGCACCTGCAGCGCAAC +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTPASRP*GHLQRN
Trigger: GTTGCGCTGCAGGTGCCCCCACGGTCGCGATGCGGG...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CCA 90 bp TCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCTCCATTTGTGTACGTCTCAGGGCCTaGGTGTCCAATGCTCGGGGC +
Preference number: 4 (lower is better)
Translates to: STFTSTRSASSAVRVSICVRLRA*VSNARG
Trigger: GCCCCGAGCATTGGACACCCAGGCCCTGAGACGTAC...ACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CCTCGCTTGTCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCAACACACCCTGGCCTTaGAACCCCACGTTATCGTGG +
Preference number: 4 (lower is better)
Translates to: PRLSTFTSTRSASSAVRVNTPWP*NPTLSW
Trigger: CCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTT...GACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
3UTR CAA 72 bp AATCGCAAACACGCAGCCACGTCTCTGATTCGATCTTaGGGGCCTGGTGTTTTTCCCAGTGACAGCCGTTGG +
Preference number: 4 (lower is better)
Translates to: NRKHAATSLIRS*GPGVFPSDSRW
Trigger: CCAACGGCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGCGTGTTTGCGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CAA 72 bp TCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTaGTCAACTTTCACATCAACGAGGAGTGCCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SALYPQVWMLPR*STFTSTRSASS
Trigger: TGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACGTCCACGATCGTTGCTaGTGCATAAAATATCGTCCC +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHVHDRC*CIKYRP
Trigger: GGGACGATATTTTATGCATCAGCAACGATCGTGGAC...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACAGTCCTTCTCCATCTTaGTGGACACATCTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: ATDASERRHTDLSLDGGHSPSPS*WTHLAA
Trigger: TGCTGCTAGATGTGTCCATCAAGATGGAGAAGGACT...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCTTCTACACCCTGATCTaGTGCCTGCACCAGCCGGGT +
Preference number: 4 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSFYTLI*CLHQPG
Trigger: ACCCGGCTGGTGCAGGCATCAGATCAGGGTGTAGAA...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTTGCCCAGGCTGGTCTTaGACTCCTGGGCTTAAGCGA +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETCPGWS*TPGLKR
Trigger: TCGCTTAAGCCCAGGAGTTCAAGACCAGCCTGGGCA...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCTCCATTTGTTTATAGCACCGAGCCCTCACTaGGTCCTCTGCCCTCTACCC +
Preference number: 4 (lower is better)
Translates to: FHINEECQLSCQSLHLFIAPSPH*VLCPLP
Trigger: GGGTAGAGGGCAGAGGACTCAGTGAGGGCTCGGTGC...TATAAACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTGTGAAATGCACTTCCTCTaGGCCAGCGAAGACTGGGGT +
Preference number: 4 (lower is better)
Translates to: QVGAGWASVLPKPLVTACEMHFL*ASEDWG
Trigger: ACCCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTC...ACAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCCATTTTCATCTCCGCTaGGGAGGGGAGGAGAACGGG +
Preference number: 4 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSHFHLR*GGEENG
Trigger: CCCGTTCTCCTCCCCTCCGCAGCGGAGATGAAAATG...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAAGGGCGGGTCATTCTTaGTGGGCTGCAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRRAGHS*WAAASA
Trigger: GGCCGAGGCTGCAGCCCAGCAAGAATGACCCGCCCT...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGGGCATCGGTACACCTTaGAGCTTCATGTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMGIGTP*SFMSSM
Trigger: CATGGAGGACATGAAGCTGCAAGGTGTACCGATGCC...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGGGCTCTGTTTTCAGGTaGATCCTGGTAGGGAAGGTG +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMGSVFR*ILVGKV
Trigger: CACCTTCCCTACCAGGATGCACCTGAAAACAGAGCC...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGATTCACCTCGGCCCCGTaGACAGAGCTGGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRFTSAP*TELVGR
Trigger: CCTCCCCACCAGCTCTGTGCACGGGGCCGAGGTGAA...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGTTGGATGGTGGTCACTaGGCTATGGCAGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMLDGGH*AMAGMC
Trigger: GCACATTCCTGCCATAGCGCAGTGACCACCATCCAA...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCCACGCTGCCAGCCTCTaGTGCCTGGAACGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSHAASL*CLERSR
Trigger: TCTAGAACGTTCCAGGCAGCAGAGGCTGGCAGCGTG...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAACAGGTGGGCCCAGCTaGAGCCACACCCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLTGGPS*SHTPGP
Trigger: AGGCCCTGGGGTGTGGCTGCAGCTGGGCCCACCTGT...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACGGTGCCAGCGTATGTaGGCCTGTGTGGGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRRCQRM*ACVGGW
Trigger: CCACCCACCCACACAGGCGCACATACGCTGGCACCG...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR GCA 90 bp TGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGTTCAGTGAATCAGCGTaGGGTGCACAGGTGTACAGA +
Preference number: 4 (lower is better)
Translates to: CSPSCRSVHLQGACASALFSESA*GAQVYR
Trigger: TCTGTACACCTGTGCACCGCACGCTGATTCACTGAA...CAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTTCCTGAGCAGCAAAACACTGTGCTGGTaGTGTTTAACAACCAAATAT +
Preference number: 4 (lower is better)
Translates to: PSGRIQCAVHAQGVFLSSKTLCW*CLTTKY
Trigger: ATATTTGGTTGTTAAACAGCACCAGCACAGTGTTTT...GCTGCTCAGGAAGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTGGCTGCAGCTGGCAGTaGCCACGCGTTTCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: LLSEQVCSAPGCTEFVPAGCSWQ*PRVSLV
Trigger: GACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCC...AGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACACCGACATCCCGCATaGGTCTGCTGGTCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRHRHPA*VCWSGW
Trigger: CCAGCCGGACCAGCAGACCCATGCGGGATGTCGGTG...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACGTGCACAGAGCTGGTaGGGAGGCTCCGACTGGGGA +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRRAQSW*GGSDWG
Trigger: TCCCCAGTCGGAGCCTCCCCACCAGCTCTGTGCACG...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAACCTGCCGCACGGTGTaGGGCAGTGTGGGACCCACG +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLTCRTV*GSVGPT
Trigger: CGTGGGTCCCACACTGCCCCACACCGTGCGGCAGGT...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATTTCCAGGCCAGACCGTaGAAGAAGCCTGAAATGCAC +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDFQARP*KKPEMH
Trigger: GTGCATTTCAGGCTTCTTCCACGGTCTGGCCTGGAA...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCCATAGGGGGCCACGATaGATCTGTGACTCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSHRGPR*ICDSGL
Trigger: GAGCCCAGAGTCACAGATCCATCGTGGCCCCCTATG...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp AGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAACTTCGTTCGCCCGTGTaGTCATCCACATCTTCGGCA +
Preference number: 4 (lower is better)
Translates to: RKHTLALEPHVIVEDATKLRSPV*SSTSSA
Trigger: TGCCGAAGATGTGGATGACCACACGGGCGAACGAAG...TTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TTAGTGATTCTTGATGGCCACAAATGGTATTTGCAAAGGAAACTTCTCACCACCAGCCAGGGAGCGCCCTaGCCCACACCCTCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LVILDGHKWYLQRKLLTTSQGAP*PTPSGR
Trigger: CCTGCCTGAGGGTGTGGGCCAGGGCGCTCCCTGGCT...GGTGGTGAGAAGTTTCCTTTGCAAATACCATTTGTGGCCATCAAGAATCACTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGGCTGCTCTTGACACATaGGCGGGTGTATTAACAGAG +
Preference number: 4 (lower is better)
Translates to: CSPSCRSVHLQGACASALAALDT*AGVLTE
Trigger: CTCTGTTAATACACCCGCCCATGTGTCAAGAGCAGC...CAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGACCGTGGAAGAAGCCTaGAATGCACCATCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMTVEEA*NAPSAV
Trigger: TACAGCTGATGGTGCATTTCAGGCTTCTTCCACGGT...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGCTCAGCATGAGAAATaGATAAAGAGGGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSAQHEK*IKRGSV
Trigger: CACAGAGCCCCTCTTTATTCATTTCTCATGCTGAGC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATAGTTTTTGTTGCCGTTaGGGAAGGGATGTCGGACAC +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDSFCCR*GRDVGH
Trigger: GTGTCCGACATCCCTTCCTCAACGGCAACAAAAACT...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp AAACTTCTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCGGGTGTGAGGAAGTGTaGGAAGCGGATGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: KLLTTQLLSEQVCSAPGCGCEEV*EADDCA
Trigger: GGCACAGTCATCCGCTTCTCACACTTCCTCACACCC...GCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAGAACGGGTGCCGCAATaGAGAACAGCGACAGCCGCG +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRERVPQ*RTATAA
Trigger: CGCGGCTGTCGCTGTTCTGCATTGCGGCACCCGTTC...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTACCTGGCGGGAACCTGTaGCCATCGGCCAGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLPGGNL*PSASVS
Trigger: ACTGACGCTGGCCGATGGGCACAGGTTCCCGCCAGG...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGATGGCAGAGGGGAGGGTaGACCTGGTCCTCACCGACA +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRWQRGG*TWSSPT
Trigger: TGTCGGTGAGGACCAGGTGCACCCTCCCCTCTGCCA...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTGCTGCCAGCCTCTGCTaGCTGGAACGTTCTAGATTC +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETAASLC*LERSRF
Trigger: GAATCTAGAACGTTCCAGGCAGCAGAGGCTGGCAGC...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATCAGAAGACCCAGTCCTaGCAACCAAACCTGGGTTTT +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDQKTQS*QPNLGF
Trigger: AAAACCCAGGTTTGGTTGGCAGGACTGGGTCTTCTG...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTACACATCTTCGGCATCTaGCACTGCCAACCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLHQDAQNLSQLLHRKGLHIFGI*HCQPLS
Trigger: GGACAGGGGTTGGCAGTGGCAGATGCCGAAGATGTG...TAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515206.6
CDS-3UTR GCA 90 bp CTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTTGTCAACTTTCACATCTTCAGTGAATCAGCGTaGGGTGCACAGGTGTACAGA +
Preference number: 4 (lower is better)
Translates to: LCPLPTGMDAASLVNFHIFSESA*GAQVYR
Trigger: TCTGTACACCTGTGCACCGCACGCTGATTCACTGAA...GATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CACACATCACTACAGGCGGTCAGTGGCTATCAGTCCTGCAATATTCACCATCAAGGGACAGACACTCTGTaGCAGAGCGTGGGACAAGCA +
Preference number: 4 (lower is better)
Translates to: HTSLQAVSGYQSCNIHHQGTDTL*QSVGQA
Trigger: TGCTTGTCCCACGCTCTGGCACAGAGTGTCTGTCCC...TTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR CCA 90 bp TTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCTCCATTTGTTTATAGTCGCTTGGAGGGGTTaGACTTCTCTGCCCCCACGG +
Preference number: 4 (lower is better)
Translates to: FHINEECQLSCQSLHLFIVAWRG*TSLPPR
Trigger: CCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGAC...TATAAACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAAGCAGGCTGGCCAGGTaGTCCAACTCGGCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRSRLAR*SNSALR
Trigger: CCTCAACGCCGAGTTGGACCACCTGGCCAGCCTGCT...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp TGTTATGTAACCATGAATTTACAACTAACACCCATATGGGGCTGGCCTGCCTGTAGCAGGCTGGCCAGGTaGTCCAACTCGGCGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CYVTMNLQLTPIWGWPACSRLAR*SNSALR
Trigger: CCTCAACGCCGAGTTGGACCACCTGGCCAGCCTGCT...ACAGGCAGGCCAGCCCCATATGGGTGTTAGTTGTAAATTCATGGTTACATAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCGGGTCATTCTTGCTaGGCTGCAGCCTCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLAGHSC*AAASAW
Trigger: CCAGGCCGAGGCTGCAGCCCAGCAAGAATGACCCGC...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGATGGACTTGGCAGCCATaGGACGGGTGCTCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRWTWQP*DGCSLP
Trigger: AGGCAGCGAGCACCCGTCCCATGGCTGCCAAGTCCA...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCAGTGTAGGGCCAAAGTaGGAAGTAGGCGCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSSVGPK*EVGASP
Trigger: AGGACTGGCGCCTACTTCCCACTTTGGCCCTACACT...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTATGAGCCACTGCGCCTaGCCTGCAGGCCTAATTATT +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSMSHCA*PAGLII
Trigger: AATAATTAGGCCTGCAGGCCAGGCGCAGTGGCTCAT...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp AGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAACAACTAACACCCATATaGGGCTGGCCTGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: RKHTLALEPHVIVEDATKQLTPI*GWPACE
Trigger: TTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTG...TTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp CAACTAACACCCATATGGGGCTGGCCTGCCTGTGAATCACCATTGCCTTCATTGAGAGGAAACACACCCTaGCCTTGGAACCCCACGTTA +
Preference number: 4 (lower is better)
Translates to: QLTPIWGWPACESPLPSLRGNTP*PWNPTL
Trigger: TAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCT...CAATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp AAACTTCTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCGGCAAGTCCACCCTGTaGGACAAAGCTGCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: KLLTTQLLSEQVCSAPGCGKSTL*DKAAPS
Trigger: TGAAGGGGCAGCTTTGTCCCACAGGGTGGACTTGCC...GCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCACAGCTCTCCCCAGTaGCCTAGGAGGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: YFLNRCVLHQDAQNLSQLHSSPQ*PRRHQE
Trigger: CTCCTGATGCCTCCTAGGCCACTGGGGAGAGCTGTG...AAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAAGCGCACACGGCAGATaGAGCAGCGGGTCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLSAHGR*SSGSGR
Trigger: CCTTCCTGACCCGCTGCTTCATCTGCCGTGTGCGCT...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACGGGAGCATGGCTCCTaGCGGCGCCTTCTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTREHGS*RRLLLL
Trigger: CAGAAGAAGAAGGCGCCGTCAGGAGCCATGCTCCCG...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGGACGGGCTCGGCGGGTaGGAGATGGGCGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGDGLGG*EMGEFL
Trigger: CAGGAACTCGCCCATCTCTCACCCGCCGAGCCCGTC...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTTCCTCTTGCTTGGGGTaGCTTCTACACCCTGATCTG +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETSSCLG*LLHPDL
Trigger: CAGATCAGGGTGTAGAAGTCACCCCAAGCAAGAGGA...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGACACTCAAGACATGTaGTACACAAGACTCTCAGTC +
Preference number: 4 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSDTQDM*YTRLSV
Trigger: GACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CATCACTACAGGCGGTCAGTGGCTATCAGTCCTGCAATATTCACCATCAACAGACCTCTAACCACTTTCTaGGATCACAGAACCCGGGGG +
Preference number: 4 (lower is better)
Translates to: HHYRRSVAISPAIFTINRPLTTF*DHRTRG
Trigger: CCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGG...TCTGTTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR TCA 90 bp TACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTTGGGTGTGAGGAAGTGTaGGAAGCGGATGACTGTGCC +
Preference number: 4 (lower is better)
Translates to: YFLNRCVLHQDAQNLSQLGCEEV*EADDCA
Trigger: GGCACAGTCATCCGCTTCTCACACTTCCTCACACCC...AAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTACATCCCGCATGGGTCTaGTGGTCCGGCTGGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLHPAWV*WSGWSR
Trigger: CCTACTCCAGCCGGACCAGCAGACCCATGCGGGATG...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACGGCCTCAGCAGCTCTaGAGGTGCAGGACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRRPQQL*RCRTVH
Trigger: GTGAACAGTCCTGCACCTGCAGAGCTGCTGAGGCCG...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTTTGGATGGTGGTCACTaGGCTATGGCAGGAATGTGC +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETLDGGH*AMAGMC
Trigger: GCACATTCCTGCCATAGCGCAGTGACCACCATCCAA...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGTTGTATTTCTAATTTaGCGTGTGCTGGCCTCTACA +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGVVFLI*RVLAST
Trigger: TGTAGAGGCCAGCACACGGCAAATTAGAAATACAAC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATGGAAGAAGCCTGAAATaGACCATCAGCTGTAGGTTC +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDGRSLK*TISCRF
Trigger: GAACCTACAGCTGATGGTGCATTTCAGGCTTCTTCC...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTCCTTATCCCTATCCCTaGCACATGGGGGCAAACTGT +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETPYPYP*HMGANC
Trigger: ACAGTTTGCCCCCATGTGGCAGGGATAGGGATAAGG...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp TCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTAGATTCGGCATCTGCCACTaGCAACCCCTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SAPGCTEFVPASAQERFRFGICH*QPLSLE
Trigger: TTCCAAGGACAGGGGTTGGCAGTGGCAGATGCCGAA...TCTAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515206.6
CDS-3UTR GCA 90 bp ATGGATGCTGCCTCGCTTGTCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCCTCTGGTCAAGAGAATaGGCCTCTAACCACTTTCTG +
Preference number: 4 (lower is better)
Translates to: MDAASLVNFHINEECQLSLWSRE*ASNHFL
Trigger: CAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAG...GCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCCACACTTCCTCACAGTaGAAAATGAACCGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCHTSSQ*KMNRKE
Trigger: TTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTG...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CCTGCAGAGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCCCCCAAGACACATACTaGATCAAGTTGCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: PAEETHPGLGTPRYRGRCPQDTY*IKLLNF
Trigger: GAAATTCAGCAACTTGATGCAGTATGTGTCTTGGGG...GCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTCTGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCTCCATTTGTTTATAGTCCCAGCAAGTGGGTaGTGGATGGGCGAGTGTGCT +
Preference number: 4 (lower is better)
Translates to: FHINEECQLSCQSLHLFIVPASG*WMGECA
Trigger: AGCACACTCGCCCATCCAGCACCCACTTGCTGGGAC...TATAAACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CAACTAACACCCATATGGGGCTGGCCTGCCTGTGAATCACCATTGCCTTCATTGGGAATGCATTCGAGGTaGTCACTGAGGGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: QLTPIWGWPACESPLPSLGMHSR*SLRAKR
Trigger: TCTCTTTGCCCTCAGTGAGCACCTCGAATGCATTCC...CAATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTAGACATGTGCCTCAGCCTTaGAAAGCAGGCAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: SAPGCTEFVPASAQERFRHVPQP*KAGKST
Trigger: GGTGGACTTGCCTGCTTTGCAAGGCTGAGGCACATG...TCTAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCTCCATTTGTTTCGGCATCTGCCACTaGCAACCCCTTGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: STFTSTRSASSAVRVSICFGICH*QPLGRS
Trigger: GCTTCTTCCAAGGGGTTGGCAGTGGCAGATGCCGAA...ACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR CCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTTTTGCATCCGCGGTaGCTGCGGTGTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRLLHPR*LRCLLW
Trigger: CCAGAGCAGACACCGCAGCCACCGCGGATGCAAAAG...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTCGCACAGACTGGTGGTaGCTTTTACTTTTGCATCCG +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSRTDWW*LLLLHP
Trigger: CGGATGCAAAAGTAAAAGCCACCACCAGTCTGTGCG...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCTGCAGCCTCGGCCTaGCACCATCCTCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLAAASA*HHPHCA
Trigger: AGCACAGTGAGGATGGTGCCAGGCCGAGGCTGCAGC...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACAGCTGCAGCCTCGGCCTaGCACCATCCTCACTGTGCT +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTAAASA*HHPHCA
Trigger: AGCACAGTGAGGATGGTGCCAGGCCGAGGCTGCAGC...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAAGTGCACTGTGGCGATaGGCTGACCCTGCCTGCACA +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRSALWR*ADPACT
Trigger: TGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCACT...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCGACTCTGGGCTCAGATaGTTGGCTGTTCTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSDSGLR*LAVLFQ
Trigger: CTGGAAGAGAACAGCCAACCATCTGAGCCCAGAGTC...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp AAACTTCTCACCACCCAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACACCCATATGGGGCTaGCCTGCCTGTGAATCACCA +
Preference number: 4 (lower is better)
Translates to: KLLTTQLLSEQVCSAPGCTPIWG*PACESP
Trigger: TGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGT...GCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTGGTGAGAAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GCGTTTCTCTGGTCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACACACCCATATGGGGCTaGCCTGCCTGTGAATCACCA +
Preference number: 4 (lower is better)
Translates to: AFLWSRECASNHFLRSQNTPIWG*PACESP
Trigger: TGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGT...GTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGAAATGCTGTCATGCTTaGATAGACTTAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKKCCHA*IDLRPV
Trigger: AACTGGCCTTAAGTCTATTCAAGCATGACAGCATTT...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTCATCTAAGTAAGCACTaGCACCTCAAAGCCACTGAC +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSHLSKH*HLKATD
Trigger: GTCAGTGGCTTTGAGGTGTCAGTGCTTACTTAGATG...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGCAAGAACCAGGCCACTaGGAGGCGCAGGCACCTGGC +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGQEPGH*EAQAPG
Trigger: GCCAGGTGCCTGCGCCTCTCAGTGGCCTGGTTCTTG...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTGTTCTCTTCCAGTACTaGGAGGAGATCCTTATCCCT +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSVLFQY*EEILIP
Trigger: AGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAAC...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTGTGCCATGCTCAGCATaGGAAATGAATAAAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSVPCSA*EMNKEG
Trigger: CCCCTCTTTATTCATTTCTCATGCTGAGCATGGCAC...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGCAACTTTCCACCTCCTaGACCATAAGAAGAACCATC +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMQLSTS*TIRRTI
Trigger: GATGGTTCTTCTTATGGTTCAGGAGGTGGAAAGTTG...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR TCA 90 bp TTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCTCCATTTGTTTATAAGATGCAGACCGAACTaGGTACGTCTCAGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: FHINEECQLSCQSLHLFIRCRPN*VRLRAW
Trigger: CCAGGCCCTGAGACGTACTCAGTTCGGTCTGCATCT...TATAAACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp GAGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAATGTATTAACAGAGTGTaGGGGAATGCATTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: EETHPGLGTPRYRGRCNQCINRV*GNAFEV
Trigger: CACCTCGAATGCATTCCCTCACACTCTGTTAATACA...TTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACATTTTCATCTCCGCTaGGGAGGGGAGGAGAACGGG +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRHFHLR*GGEENG
Trigger: CCCGTTCTCCTCCCCTCCGCAGCGGAGATGAAAATG...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACAGGTGGCTGCGGTGTCTaGTCTGGGTTTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTGGCGV*SGFCPQ
Trigger: CTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACC...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGGTGGCTGCGGTGTCTaGTCTGGGTTTTGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLGGCGV*SGFCPQ
Trigger: CTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACC...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTATCATTCTTGCTGGGCTaGAGCCTCGGCCTGGCACCA +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLSFLLG*SLGLAP
Trigger: TGGTGCCAGGCCGAGGCTGCAGCCCAGCAAGAATGA...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACAGCAGCTCTGCAGGTaGAGGACTGTTCACCTCGGC +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTQQLCR*RTVHLG
Trigger: GCCGAGGTGAACAGTCCTGCACCTGCAGAGCTGCTG...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACAGCTATGGCAGGAATGTaGACCCCGAAGCTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTAMAGM*TPKLGA
Trigger: CGCCCCAAGCTTCGGGGTGCACATTCCTGCCATAGC...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGGGGACGGGTGCTCGCTaGCTCTGGGGCATGAAGCTG +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGGTGAR*LWGMKL
Trigger: CAGCTTCATGCCCCAGAGGCAGCGAGCACCCGTCCC...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACAACACAGGAGGCAGAATaGACAGTGCGGCGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTTQEAE*TVRRGG
Trigger: ACCACCCCGCCGCACTGTGCATTCTGCCTCCTGTGT...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAACTAACACCCATATGGGGCTGGCCTGCCTGTGAATCACCATTGCCTTCATTGCACAGGTATGGATGCTaGCTCGCTTGTCAACTTTCA +
Preference number: 4 (lower is better)
Translates to: QLTPIWGWPACESPLPSLHRYGC*LACQLS
Trigger: TGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTG...CAATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTCATGTGCCTCAGCCTTaGAAAGCAGGCAAGTCCACC +
Preference number: 4 (lower is better)
Translates to: LLSEQVCSAPGCTEFVPAHVPQP*KAGKST
Trigger: GGTGGACTTGCCTGCTTTGCAAGGCTGAGGCACATG...AGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TGTTATGTAACCATGAATTTACAACTAACACCCATATGGGGCTGGCCTGCCTGTTCGGGCTGTGCTGCATaGTCGCCTAGCTGTAGGTCT +
Preference number: 4 (lower is better)
Translates to: CYVTMNLQLTPIWGWPACSGCAA*SPSCRS
Trigger: AGACCTACAGCTAGGCGAGCATGCAGCACAGCCCGA...ACAGGCAGGCCAGCCCCATATGGGTGTTAGTTGTAAATTCATGGTTACATAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGGGGTCCATGGCCCAGTaGAGCTGCCGGCAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGGSMAQ*SCRQKS
Trigger: GGACTTCTGCCGGCAGCTCCACTGGGCCATGGACCC...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTTTTGCATCCGCGGTaGCTGCGGTGTCTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTLLHPR*LRCLLW
Trigger: CCAGAGCAGACACCGCAGCCACCGCGGATGCAAAAG...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATTTCCTGCTGAGTAATTaGGTTTTCCATGCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDFLLSN*VFHAVP
Trigger: CGGAACTGCATGGAAAACCCAATTACTCAGCAGGAA...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTAGATTCCTCTATGAGTaGGCTCACGGACCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETRFLYE*AHGPLS
Trigger: AGAAAGGGGTCCGTGAGCCCACTCATAGAGGAATCT...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTATGTAGGTTCTCGGGTTaGTGGATTGGTGACCTTCAC +
Preference number: 4 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLCRFSG*WIGDLH
Trigger: GTGAAGGTCACCAATCCACCAACCCGAGAACCTACA...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAACAGCGTGGCCTGCCTaGCAGCAACCCACCACTCAA +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLTAWPA*QQPTTQ
Trigger: TTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGT...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGACCAAAGTGCTGACTTaGGGAGTTTTTGTTGCCGTT +
Preference number: 4 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMTKVLT*GVFVAV
Trigger: AACGGCAACAAAAACTCCCCAAGTCAGCACTTTGGT...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTCGACGAGGAGGCCGCTaGGTCCGCAAGGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVRRGGR*VRKGLL
Trigger: CAGGAGGCCCTTGCGGACCCAGCGGCCTCCTCGTCG...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CCA 90 bp GCGTTTCTCTGGTCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACCTCTACCCACAGGTATaGATGCTGCCTCGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AFLWSRECASNHFLRSQNLYPQV*MLPRLS
Trigger: TGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAG...GTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGACCAGAGAAACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp TGCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCCCAAAACACTGTGCTaGTGCTGTTTAACAACCAAA +
Preference number: 4 (lower is better)
Translates to: CSPSCRSVHLQGACASALPKTLC*CCLTTK
Trigger: TTTGGTTGTTAAACAGCACCAGCACAGTGTTTTGGG...CAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCAATTTTAGTTTTCCTTaGAACTGCATCGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: TLADCACTALQSVCLRTGNFSFP*NCIVRK
Trigger: CTTCCTGACGATGCAGTTTCAAGGAAAACTAAAATT...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACGTCAGTCTGTTCCCTaGGCACCAAAACGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTRQSVP*APKRRS
Trigger: AGAGCGGCGTTTTGGTGCTCAGGGAACAGACTGACG...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCCAAACCCGGAGTCTGTaGACTCTGTATTACGTGATG +
Preference number: 4 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSQTRSL*TLYYVM
Trigger: CATCACGTAATACAGAGTTCACAGACTCCGGGTTTG...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAGCCACGATGGATCTGTaGCTCTGGGCTCAGATGGTT +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRATMDL*LWAQMV
Trigger: AACCATCTGAGCCCAGAGTCACAGATCCATCGTGGC...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGAACATGCATGTTGATTaGGACTTTTTCAGGGATACA +
Preference number: 4 (lower is better)
Translates to: THDSTAWRSPFERRPLAKNMHVD*DFFRDT
Trigger: TGTATCCCTGAAAAAGTCTCAATCAACATGCATGTT...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TGTTATGTAACCATGAATTTACAACTAACACCCATATGGGGCTGGCCTGCCTGTGGGCTGGCCTGCCTGTaGATCACCATTGCCTTCATT +
Preference number: 4 (lower is better)
Translates to: CYVTMNLQLTPIWGWPACGLACL*ITIAFI
Trigger: AATGAAGGCAATGGTGATTCACAGGCAGGCCAGCCC...ACAGGCAGGCCAGCCCCATATGGGTGTTAGTTGTAAATTCATGGTTACATAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp TGTTATGTAACCATGAATTTACAACTAACACCCATATGGGGCTGGCCTGCCTGTCCTCTAACCACTTTCTaGGATCACAGAACCCGGGGG +
Preference number: 4 (lower is better)
Translates to: CYVTMNLQLTPIWGWPACPLTTF*DHRTRG
Trigger: CCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGG...ACAGGCAGGCCAGCCCCATATGGGTGTTAGTTGTAAATTCATGGTTACATAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTAAATATCGTCCCTTCTaGACTCACGACCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSKYRPF*THDQSK
Trigger: TTTGCTCTGGTCGTGAGTGCAGAAGGGACGATATTT...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTATCACTCCAGAGGCCCTaGTCAGCATCCTGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLSLQRP*SASCAA
Trigger: AGCAGCACAGGATGCTGAGCAGGGCCTCTGGAGTGA...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAGGCTCCTGCGTATGCTaGACACACACACTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRGSCVC*THTLAD
Trigger: GTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCC...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CAAGTTGCTGAATTTCCTATGGCAAGAATTTCCCGATTTTTCAAAAAGCACCAGACTGGCCTCTCCTACTaGGGAAGAGGGCACCGAGCC +
Preference number: 4 (lower is better)
Translates to: QVAEFPMARISRFFKKHQTGLSY*GRGHRA
Trigger: GGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCCAGT...CTGGTGCTTTTTGAAAAATCGGGAAATTCTTGCCATAGGAAATTCAGCAACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CACACATCACTACAGGCGGTCAGTGGCTATCAGTCCTGCAATATTCACCATCAAGGAATGCATTCGAGGTaGTCACTGAGGGCAAAGAGA +
Preference number: 4 (lower is better)
Translates to: HTSLQAVSGYQSCNIHHQGMHSR*SLRAKR
Trigger: TCTCTTTGCCCTCAGTGAGCACCTCGAATGCATTCC...TTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR CCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGTGCCGGCAGAAGTCCTaGCGGTCGTCCACGTGGATG +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGCRQKS*RSSTWM
Trigger: CATCCACGTGGACGACCGCCAGGACTTCTGCCGGCA...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTATGGGATAGCCCCTCGTaGCAAAACGCTGAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLWDSPS*QNAELQ
Trigger: CTGGAGCTCAGCGTTTTGCCACGAGGGGCTATCCCA...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTTGGGGAGGCTCCGACTaGGGAAGGCCGTCTGTGGGC +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVWGGSD*GRPSVG
Trigger: GCCCACAGACGGCCTTCCCCAGTCGGAGCCTCCCCA...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCCACGACAGCACAGCATaGAGGTCACCTTTTGAAAGA +
Preference number: 4 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSHDSTA*RSPFER
Trigger: TCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTG...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
3UTR CAA 72 bp CTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTaGTCCCAGCTTCTGCACAGGAAAGGTTTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: LNRCVLHQDAQN*SQLLHRKGLEE
Trigger: TTCCTCTAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp AGAGAGCTTCAGAGATTTCACACTTCCTCACAGTGCAAAATGAACCGCAAAGAAGCACAGGTGTACAGATaGGTGAGCGGTCAACACTGC +
Preference number: 4 (lower is better)
Translates to: RELQRFHTSSQCKMNRKEAQVYR*VSGQHC
Trigger: GCAGTGTTGACCGCTCACTCATCTGTACACCTGTGC...TTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTGAAATCTCTGAAGCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp CATCACTACAGGCGGTCAGTGGCTATCAGTCCTGCAATATTCACCATCAACAGACAACCAAATATTCAGTaGATCAGCGTGCGGTGCACA +
Preference number: 4 (lower is better)
Translates to: HHYRRSVAISPAIFTINRQPNIQ*ISVRCT
Trigger: TGTGCACCGCACGCTGATTCACTGAATATTTGGTTG...TCTGTTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR GCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTACGTGAGCTCTGCTCCTaGACGACTTGGAAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLRELCS*TTWKKL
Trigger: GAGCTTCTTCCAAGTCGTGCAGGAGCAGAGCTCACG...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTCCTGGCGGGAACCTGTaGCCATCGGCCAGCGTCAGT +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVPGGNL*PSASVS
Trigger: ACTGACGCTGGCCGATGGGCACAGGTTCCCGCCAGG...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGGCGGGACCAGCGTaGCCAAGGCACTTTTGGGCA +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVGAGPA*PRHFWA
Trigger: TGCCCAAAAGTGCCTTGGCCACGCTGGTCCCGCCCC...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTATCTGAGCTTGGATGGTaGTCACTGCGCTATGGCAGG +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLSELGW*SLRYGR
Trigger: CCTGCCATAGCGCAGTGACCACCATCCAAGCTCAGA...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACATCTGAGCTTGGATGGTaGTCACTGCGCTATGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTSELGW*SLRYGR
Trigger: CCTGCCATAGCGCAGTGACCACCATCCAAGCTCAGA...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACCCGGGGGCCTCAAACCCCACGTTATCGTaGAAGATGCAACCAAAAATA +
Preference number: 4 (lower is better)
Translates to: SRECASNHFLRSQNPGASNPTLS*KMQPKI
Trigger: TATTTTTGGTTGCATCTTCCACGATAACGTGGGGTT...TGAGGCCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp AAGAGGCAGATTAGGAAGAACCGTCCGCAGAGACCCACTGAGAACTCGGGAGATAATTTTAGTTTTCCTTaGAACTGCATCGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KRQIRKNRPQRPTENSGDNFSFP*NCIVRK
Trigger: CTTCCTGACGATGCAGTTTCAAGGAAAACTAAAATT...ATCTCCCGAGTTCTCAGTGGGTCTCTGCGGACGGTTCTTCCTAATCTGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp CTGGCCCTCAGAACAGGGAACTCCAAGAGTGGAACATGCATGTTGATTGAGACTGAACTCTGTATTACGTaGTGTACCAAGAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: LALRTGNSKSGTCMLIETELCIT*CTKRQI
Trigger: AATCTGCCTCTTGGTACATCACGTAATACAGAGTTC...AGTCTCAATCAACATGCATGTTCCACTCTTGGAGTTCCCTGTTCTGAGGGCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGAACGGGTGCCGCAATaGAGAACAGCGACAGCCGCG +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVERVPQ*RTATAA
Trigger: CGCGGCTGTCGCTGTTCTGCATTGCGGCACCCGTTC...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGCACACAGCCGTCTaGAGCACCCTCACACCCAGA +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVGHTAV*STLTPR
Trigger: TCTGGGTGTGAGGGTGCTGCAGACGGCTGTGTGCCC...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp CAAGTTGCTGAATTTCCTATGGCAAGAATTTCCCGATTTTTCAAAAAGCACCAGGTCACACGCTCGTCCTaGAGAGGAAACACACCCTGG +
Preference number: 4 (lower is better)
Translates to: QVAEFPMARISRFFKKHQVTRSS*RGNTPW
Trigger: CCAGGGTGTGTTTCCTCTGCAGGACGAGCGTGTGAC...CTGGTGCTTTTTGAAAAATCGGGAAATTCTTGCCATAGGAAATTCAGCAACTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGTCGCTTGGAGGGGTTaGACTTCTCTGCCCCCACGG +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVVAWRG*TSLPPR
Trigger: CCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGAC...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTTGCCCAAACACCACCTaGGGAGGGTCCATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVCPNTT*GGSMAQ
Trigger: CTGGGCCATGGACCCTCCCCAGGTGGTGTTTGGGCA...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCATTCGCACAGACTGGTaGTGGCTTTTACTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSIRTDW*WLLLLH
Trigger: ATGCAAAAGTAAAAGCCACCACCAGTCTGTGCGAAT...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTAGGGCAGGGGCTTTGTaGGTCCTGGAGTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVRAGAL*VLESPS
Trigger: GGAGGGAGACTCCAGGACCCACAAAGCCCCTGCCCT...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTACCAGCCTCTGCTGCCTaGAACGTTCTAGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLPASAA*NVLDSS
Trigger: AGAGGAATCTAGAACGTTCCAGGCAGCAGAGGCTGG...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGACCCACCACTCAATCTaGCACCTGTCACCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGTHHSI*HLSPGG
Trigger: CCCTCCTGGTGACAGGTGCCAGATTGAGTGGTGGGT...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGTATGTGCGCCTGTGTaGGTGGGTGGCTGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVVCAPV*VGGCVC
Trigger: GCACACGCAGCCACCCACCCACACAGGCGCACATAC...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAAGCCGCTGCACCTTCTaGCCAATGTTTGTCCTTTTC +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRSRCTF*PMFVLF
Trigger: GAAAAGGACAAACATTGGCCAGAAGGTGCAGCGGCT...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CCA 90 bp TGTTTAACAACCAAATATTCAGTGAATCAGCGTGCGGTGCACAGGTGTACAGATCAACTAACACCCATATaGGGCTGGCCTGCCTGTGAA +
Preference number: 4 (lower is better)
Translates to: CLTTKYSVNQRAVHRCTDQLTPI*GWPACE
Trigger: TTCACAGGCAGGCCAGCCCCATATGGGTGTTAGTTG...ATCTGTACACCTGTGCACCGCACGCTGATTCACTGAATATTTGGTTGTTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGAAACGCCGCTCTCTCTaGTGCTCCTTCCTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGKRRSL*CSFLLS
Trigger: ACTCAGCAGGAAGGAGCAGCAGAGAGAGCGGCGTTT...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTACGCCGTGCCCCAGGTaGGAGATGTACACCTGTTGC +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVTPCPR*EMYTCC
Trigger: GCAACAGGTGTACATCTCGCACCTGGGGCACGGCGT...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTCGGCCTCAGCAGCTCTaGAGGTGCAGGACTGTTCAC +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVRPQQL*RCRTVH
Trigger: GTGAACAGTCCTGCACCTGCAGAGCTGCTGAGGCCG...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp TCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCAGAGTCTCCATTTGTAAACCCAAAACACTGTaGTGGTGCTGTTTAACAACC +
Preference number: 4 (lower is better)
Translates to: STFTSTRSASSAVRVSICKPKTL*WCCLTT
Trigger: GGTTGTTAAACAGCACCAGCACAGTGTTTTGGGTTT...ACAAATGGAGACTCTGACAGCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGTCCCGGTGTCGCTTaGAGGGGTTGGACTTCTCTG +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVGPGVA*RGWTSL
Trigger: CAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACC...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTGGGCTCAGATGGTTaGCTGTTCTCTTCCAGTACT +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTLGSDG*LFSSST
Trigger: AGTACTGGAAGAGAACAGCCAACCATCTGAGCCCAG...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTACCATCGTGTATATTTTaGCTGTTCAGCGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLPSCIF*LFSGAS
Trigger: GCTGGCACCGCTGAACAGCCAAAATATACACGATGG...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR TCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTTGTCCAGCTTGGAGATaGTGTCAGGCGGGAACGGCA +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVCPAWR*CQAGTA
Trigger: TGCCGTTCCCGCCTGACATCATCTCCAAGCTGGACA...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR TCA 90 bp TTAGTGATTCTTGATGGCCACAAATGGTATTTGCAAAGGAAACTTCTCACCACCCACCCAGTTACTTTCTaGACAGGTGTGTTCTGCACC +
Preference number: 4 (lower is better)
Translates to: LVILDGHKWYLQRKLLTTHPVTF*TGVFCT
Trigger: GGTGCAGAACACACCTGTTCAGAAAGTAACTGGGTG...GGTGGTGAGAAGTTTCCTTTGCAAATACCATTTGTGGCCATCAAGAATCACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGGCGCATGCACAGCTCTaGAAAGCGTGTGTCTTAGGA +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGAHAQL*KACVLG
Trigger: TCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGC...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCTCCAAGAGTGGAACATaGATGTTGATTGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSSKSGT*MLIETF
Trigger: AAAAGTCTCAATCAACATGCATGTTCCACTCTTGGA...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp CAGTTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCACACACTTCCTCACAGTaGAAAATGAACCGCAAAGAA +
Preference number: 4 (lower is better)
Translates to: QLLSEQVCSAPGCTEFVPHTSSQ*KMNRKE
Trigger: TTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTG...TGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp TGTTTAACAACCAAATATTCAGTGAATCAGCGTGCGGTGCACAGGTGTACAGATTGTTCTGCACCAGGATaGACAGAATTTGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CLTTKYSVNQRAVHRCTDCSAPG*TEFVPA
Trigger: AGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACA...ATCTGTACACCTGTGCACCGCACGCTGATTCACTGAATATTTGGTTGTTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTTGGCCAAGGCACTTTTaGGCAACATCCCGGGCACCA +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVWPRHF*ATSRAP
Trigger: TGGTGCCCGGGATGTTGCCCAAAAGTGCCTTGGCCA...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGGCTGCTCCTTCCTGCTaGGTAATTGGGTTTTCCATG +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGAAPSC*VIGFSM
Trigger: CATGGAAAACCCAATTACTCAGCAGGAAGGAGCAGC...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGGTAGACACACAGATCTaGGCTTGGATGGTGGTCACT +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGVDTQI*AWMVVT
Trigger: AGTGACCACCATCCAAGCTCAGATCTGTGTGTCTAC...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp TTACTTTCTGAACAGGTGTGTTCTGCACCAGGATGCACAGAATTTGTCCCAGCTACTGCATCAAGTTGCTaGATTTCCTATGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: LLSEQVCSAPGCTEFVPATASSC*ISYGKN
Trigger: ATTCTTGCCATAGGAAATTCAGCAACTTGATGCAGT...AGCTGGGACAAATTCTGTGCATCCTGGTGCAGAACACACCTGTTCAGAAAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTATTCCTGCTGAGTAATTaGGTTTTCCATGCAGTTCCG +
Preference number: 4 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLFLLSN*VFHAVP
Trigger: CGGAACTGCATGGAAAACCCAATTACTCAGCAGGAA...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACCACGTTTCTTGCTATaGTTTCAACTTTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTPRFLL*FQLSTS
Trigger: GGAGGTGGAAAGTTGAAACCATAGCAAGAAACGTGG...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CCA 90 bp TTAGTGATTCTTGATGGCCACAAATGGTATTTGCAAAGGAAACTTCTCACCACCACTACAGGCGGTCAGTaGCTATCAGTCCTGCAATAT +
Preference number: 4 (lower is better)
Translates to: LVILDGHKWYLQRKLLTTTTGGQ*LSVLQY
Trigger: ATATTGCAGGACTGATAGCCACTGACCGCCTGTAGT...GGTGGTGAGAAGTTTCCTTTGCAAATACCATTTGTGGCCATCAAGAATCACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR TCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAAAATGCTGTCATGCTTaGATAGACTTAAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRKCCHA*IDLRPV
Trigger: AACTGGCCTTAAGTCTATTCAAGCATGACAGCATTT...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR GCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGAAGGAACAGGGGTTATaGTGTCAATTCCAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGKEQGL*CQFQSR
Trigger: CCTGGACTGGAATTGACAGCATAACCCCTGTTCCTT...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAATAGGCCACGTTTCTTaGTATGGTTTCAACTTTCCA +
Preference number: 4 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRIGHVS*YGFNFP
Trigger: TGGAAAGTTGAAACCATAGCAAGAAACGTGGCCTAT...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGCCGATTCGCACAGACTaGTGGTGGCTTTTACTTTTG +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGPIRTD*WWLLLL
Trigger: CAAAAGTAAAAGCCACCACCAGTCTGTGCGAATCGG...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR TCA 90 bp AGAGAGCTTCAGAGATTTCACACTTCCTCACAGTGCAAAATGAACCGCAAAGAAACTGCATCAAGTTGCTaGATTTCCTATGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: RELQRFHTSSQCKMNRKETASSC*ISYGKN
Trigger: ATTCTTGCCATAGGAAATTCAGCAACTTGATGCAGT...TTCTTTGCGGTTCATTTTGCACTGTGAGGAAGTGTGAAATCTCTGAAGCTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR GCA 90 bp CAAGTTGCTGAATTTCCTATGGCAAGAATTTCCCGATTTTTCAAAAAGCACCAGCCCCAAGACACATACTaGATCAAGTTGCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: QVAEFPMARISRFFKKHQPQDTY*IKLLNF
Trigger: GAAATTCAGCAACTTGATGCAGTATGTGTCTTGGGG...CTGGTGCTTTTTGAAAAATCGGGAAATTCTTGCCATAGGAAATTCAGCAACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGATTCGCACAGACTGGTaGTGGCTTTTACTTTTGCAT +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGIRTDW*WLLLLH
Trigger: ATGCAAAAGTAAAAGCCACCACCAGTCTGTGCGAAT...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTAGGTTCTCGGGTTGGTaGATTGGTGACCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVRFSGW*IGDLHF
Trigger: AAAGTGAAGGTCACCAATCCACCAACCCGAGAACCT...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CCA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGATTATTCTCCTAGGATaGCAATGGGAACCCTCATTT +
Preference number: 4 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGIILLG*QWEPSF
Trigger: AAATGAGGGTTCCCATTGCCATCCTAGGAGAATAAT...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR GCA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTAGAGAAATGCTGTCATaGTTGAATAGACTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVREMLS*LNRLKA
Trigger: GGCCTTAAGTCTATTCAAGCATGACAGCATTTCTCT...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS GCA 90 bp GTGGGCGTTGCCGACGAGGAGGCCGCTGGGTCCGCAAGGGCCTCCTaGCCGGCACCAGCCGGGCGCCAGAGCGGCCTCCCAGGCGGGGCG +
Preference number: 5 (lower is better)
Translates to: VGVADEEAAGSARAS*PAPAGRQSGLPGGA
Trigger: CGCCCCGCCTGGGAGGCCGCTCTGGCGCCCGGCTGGTGCCGGGCAGGAGGCCCTTGCGGACCCAGCGGCCTCCTCGTCGGCAACGCCCAC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS GCA 90 bp CCCCTCGGTGTCAGGCGGGTCCCGGCCTCCCCCAGAGAAGCCGCCTaGTCTGGAGCCTGGCTCAGGGCGCCGTGGCGGGAGACCGGCGTC +
Preference number: 5 (lower is better)
Translates to: PLGVRRVPASPREAA*SGAWLRAPWRETGV
Trigger: GACGCCGGTCTCCCGCCACGGCGCCCTGAGCCAGGCTCCAGAGCAGGCGGCTTCTCTGGGGGAGGCCGGGACCCGCCTGACACCGAGGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504625.1
CDS CCA 90 bp TCCGTGGCTGAACCGCGGGGTGGGCGTTGCCGACGAGGAGGCCGCTaGGTCCGCAAGGGCCTCCTGCCCGGCACCAGCCGGGCGCCAGAG +
Preference number: 5 (lower is better)
Translates to: SVAEPRGGRCRRGGR*VRKGLLPGTSRAPE
Trigger: CTCTGGCGCCCGGCTGGTGCCGGGCAGGAGGCCCTTGCGGACCCAGCGGCCTCCTCGTCGGCAACGCCCACCCCGCGGTTCAGCCACGGA
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS GCA 90 bp CCTGCACACGGCATCCGCTCCGTGGCTGAACCGCGGGGTGGGCGTTaGCGACGAGGAGGCCGCTGGGTCCGCAAGGGCCTCCTGCCCGGC +
Preference number: 5 (lower is better)
Translates to: PAHGIRSVAEPRGGR*RRGGRWVRKGLLPG
Trigger: GCCGGGCAGGAGGCCCTTGCGGACCCAGCGGCCTCCTCGTCGGCAACGCCCACCCCGCGGTTCAGCCACGGAGCGGATGCCGTGTGCAGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS CCA 90 bp CGGTGTCAGGCGGGTCCCGGCCTCCCCCAGAGAAGCCGCCTGCTCTaGAGCCTGGCTCAGGGCGCCGTGGCGGGAGACCGGCGTCCTGAG +
Preference number: 5 (lower is better)
Translates to: RCQAGPGLPQRSRLL*SLAQGAVAGDRRPE
Trigger: CTCAGGACGCCGGTCTCCCGCCACGGCGCCCTGAGCCAGGCTCCAGAGCAGGCGGCTTCTCTGGGGGAGGCCGGGACCCGCCTGACACCG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504625.1
CDS TCA 90 bp CAGCCTCGCCCGTTCCGTGCCTGCACACGGCATCCGCTCCGTGGCTaGACCGCGGGGTGGGCGTTGCCGACGAGGAGGCCGCTGGGTCCG +
Preference number: 5 (lower is better)
Translates to: QPRPFRACTRHPLRG*TAGWALPTRRPLGP
Trigger: CGGACCCAGCGGCCTCCTCGTCGGCAACGCCCACCCCGCGGTTCAGCCACGGAGCGGATGCCGTGTGCAGGCACGGAACGGGCGAGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS TCA 90 bp GCTCTGGAGCCTGGCTCAGGGCGCCGTGGCGGGAGACCGGCGTCCTaGGGAGGAAGCCATCGAGGAAGCCAGGAACGGGCGGGGCGGGGC +
Preference number: 5 (lower is better)
Translates to: ALEPGSGRRGGRPAS*GGSHRGSQERAGRG
Trigger: GCCCCGCCCCGCCCGTTCCTGGCTTCCTCGATGGCTTCCTCCTCAGGACGCCGGTCTCCCGCCACGGCGCCCTGAGCCAGGCTCCAGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504625.1
CDS GCA 90 bp CGCGACCGTGGGGGCACCTGCAGCGCAACAGCCTCGCCCGTTCCGTaGCTGCACACGGCATCCGCTCCGTGGCTGAACCGCGGGGTGGGC +
Preference number: 5 (lower is better)
Translates to: RDRGGTCSATASPVP*LHTASAPWLNRGVG
Trigger: GCCCACCCCGCGGTTCAGCCACGGAGCGGATGCCGTGTGCAGGCACGGAACGGGCGAGGCTGTTGCGCTGCAGGTGCCCCCACGGTCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS CCA 90 bp AGGCGGGTCCCGGCCTCCCCCAGAGAAGCCGCCTGCTCTGGAGCCTaGCTCAGGGCGCCGTGGCGGGAGACCGGCGTCCTGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: RRVPASPREAACSGA*LRAPWRETGVLRRK
Trigger: CTTCCTCCTCAGGACGCCGGTCTCCCGCCACGGCGCCCTGAGCCAGGCTCCAGAGCAGGCGGCTTCTCTGGGGGAGGCCGGGACCCGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504625.1
CDS GCA 90 bp GCCTCTGTTTCTGCAGGGGCCTCCTCCGCTTCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCATCGTCCTCGGCCCAGGGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: ASVSAGASSASGPRT*TPPAGSSSSAQGLR
Trigger: CCGCAGGCCCTGGGCCGAGGACGATGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGAAGCGGAGGAGGCCCCTGCAGAAACAGAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000684583.1
CDS CCA 90 bp GCAACAGCCTCGCCCGTTCCGTGCCTGCACACGGCATCCGCTCCGTaGCTGAACCGCGGGGTGGGCGTTGCCGACGAGGAGGCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: ATASPVPCLHTASAP*LNRGVGVADEEAAG
Trigger: CCCAGCGGCCTCCTCGTCGGCAACGCCCACCCCGCGGTTCAGCCACGGAGCGGATGCCGTGTGCAGGCACGGAACGGGCGAGGCTGTTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS GCA 90 bp GCCTCTGTTTCTGCAGGGGCCTCCTCCGCTTCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCATCGTCCTCGGCCGAGGAGCCACCG +
Preference number: 5 (lower is better)
Translates to: ASVSAGASSASGPRT*TPPAGSSSSAEEPP
Trigger: CGGTGGCTCCTCGGCCGAGGACGATGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGAAGCGGAGGAGGCCCCTGCAGAAACAGAGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504625.1
CDS TCA 90 bp AGGCACTGGGGGACGGGCTCGGCGGGTGAGAGATGGGCGAGTTCCTaGAAGTGCCCTGGACACACGGGCAGGGCAGGCAGGAGCCGCGGG +
Preference number: 5 (lower is better)
Translates to: RHWGTGSAGERWASS*KCPGHTGRAGRSRG
Trigger: CCCGCGGCTCCTGCCTGCCCTGCCCGTGTGTCCAGGGCACTTTCAGGAACTCGCCCATCTCTCACCCGCCGAGCCCGTCCCCCAGTGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CCA 90 bp GGGGAGGGTGCACCTGGTCCTCACCGACATCCCGCATGGGTCTGCTaGTCCGGCTGGAGTAGGCACTGGGGGACGGGCTCGGCGGGTGAG +
Preference number: 5 (lower is better)
Translates to: GEGAPGPHRHPAWVC*SGWSRHWGTGSAGE
Trigger: CTCACCCGCCGAGCCCGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGGATGTCGGTGAGGACCAGGTGCACCCTCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS GCA 90 bp AGAGGGGAGGGTGCACCTGGTCCTCACCGACATCCCGCATGGGTCTaGTGGTCCGGCTGGAGTAGGCACTGGGGGACGGGCTCGGCGGGT +
Preference number: 5 (lower is better)
Translates to: RGEGAPGPHRHPAWV*WSGWSRHWGTGSAG
Trigger: ACCCGCCGAGCCCGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGGATGTCGGTGAGGACCAGGTGCACCCTCCCCTCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS GCA 90 bp TTTACTGTTTCTGCAGGGGCCTCCTCCGCTTCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCATCGTCCTCGGCCCAGGGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: FTVSAGASSASGPRT*TPPAGSSSSAQGLR
Trigger: CCGCAGGCCCTGGGCCGAGGACGATGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGAAGCGGAGGAGGCCCCTGCAGAAACAGTAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514523.1
CDS CCA 90 bp GCACCTGGTCCTCACCGACATCCCGCATGGGTCTGCTGGTCCGGCTaGAGTAGGCACTGGGGGACGGGCTCGGCGGGTGAGAGATGGGCG +
Preference number: 5 (lower is better)
Translates to: APGPHRHPAWVCWSG*SRHWGTGSAGERWA
Trigger: CGCCCATCTCTCACCCGCCGAGCCCGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGGATGTCGGTGAGGACCAGGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CCA 90 bp TCCCCCAGAGAAGCCGCCTGCTCTGGAGCCTGGCTCAGGGCGCCGTaGCGGGAGACCGGCGTCCTGAGGAGGAAGCCATCGAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SPREAACSGAWLRAP*RETGVLRRKPSRKP
Trigger: TGGCTTCCTCGATGGCTTCCTCCTCAGGACGCCGGTCTCCCGCCACGGCGCCCTGAGCCAGGCTCCAGAGCAGGCGGCTTCTCTGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504625.1
CDS GCA 90 bp GCCTCTGTTTCTGCAGGGGCCTCCTCCGCTTCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCATCGTCCTCGGCCTTGATGTCCTCG +
Preference number: 5 (lower is better)
Translates to: ASVSAGASSASGPRT*TPPAGSSSSALMSS
Trigger: CGAGGACATCAAGGCCGAGGACGATGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGAAGCGGAGGAGGCCCCTGCAGAAACAGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000515206.6
ENST00000652417.2
CDS CCA 90 bp TCTCCAAGGGCGGGGGCTGCCCAAACACCACCTGGGGAGGGTCCATaGCCCAGTGGAGCTGCCGGCAGAAGTCCTGGCGGTCGTCCACGT +
Preference number: 5 (lower is better)
Translates to: SPRAGAAQTPPGEGP*PSGAAGRSPGGRPR
Trigger: ACGTGGACGACCGCCAGGACTTCTGCCGGCAGCTCCACTGGGCCATGGACCCTCCCCAGGTGGTGTTTGGGCAGCCCCCGCCCTTGGAGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000510910.1
ENST00000684583.1
CDS CCA 90 bp CTTGGGGTCAAGGACAAGGTCAGGGCCACCCCGGAGGCACAGGCATaGGGCCCTGGCGGGAACCTGTGCCCATCGGCCAGCGTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: LGVKDKVRATPEAQA*GPGGNLCPSASVSL
Trigger: CAGACTGACGCTGGCCGATGGGCACAGGTTCCCGCCAGGGCCCCATGCCTGTGCCTCCGGGGTGGCCCTGACCTTGTCCTTGACCCCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CCA 90 bp AGTGGCAGAGGGGAGGGTGCACCTGGTCCTCACCGACATCCCGCATaGGTCTGCTGGTCCGGCTGGAGTAGGCACTGGGGGACGGGCTCG +
Preference number: 5 (lower is better)
Translates to: SGRGEGAPGPHRHPA*VCWSGWSRHWGTGS
Trigger: CGAGCCCGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGGATGTCGGTGAGGACCAGGTGCACCCTCCCCTCTGCCACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CCA 90 bp GGGAAGGTGGCTGGGTGGCTCCTGTCACTGGCCCCCAGCCACACCTaGCTGGGCACACAGCCGTCTGCAGCACCCTCACACCCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: GKVAGWLLSLAPSHT*LGTQPSAAPSHPES
Trigger: GGACTCTGGGTGTGAGGGTGCTGCAGACGGCTGTGTGCCCAGCCAGGTGTGGCTGGGGGCCAGTGACAGGAGCCACCCAGCCACCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CCA 90 bp CTGCAGGTGCAGGACTGTTCACCTCGGCCCCGTGCACAGAGCTGGTaGGGAGGCTCCGACTGGGGAAGGCCGTCTGTGGGCTCCAGGCAG +
Preference number: 5 (lower is better)
Translates to: LQVQDCSPRPRAQSW*GGSDWGRPSVGSRQ
Trigger: CTGCCTGGAGCCCACAGACGGCCTTCCCCAGTCGGAGCCTCCCCACCAGCTCTGTGCACGGGGCCGAGGTGAACAGTCCTGCACCTGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS-3UTR CAA 90 bp CCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCTGCATGCCGGTCCCGGTGTCGCTaGGAGGGGTTGGACTTCTCT +
Preference number: 5 (lower is better)
Translates to: PGLVQREASAPESGCAACRSRCR*EGLDFS
Trigger: AGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCG...GCATGCAGCACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACTCCAAGGGCTCCCGCTaGACCACAGGGGCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDSKGSR*TTGAAS
Trigger: TGAGGCCGCCCCTGTGGTCAAGCGGGAGCCCTTGGA...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GGCCTCTCCTACTGCGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCTGCCCTCTGGTCCAACTCGGCGTaGAGGCGGTCCCGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: GLSYCGRGHRALTESSALWSNSA*RRSRCR
Trigger: GCGACACCGGGACCGCCTCAACGCCGAGTTGGACCA...GAGGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS TCA 90 bp TCAGGAAGCCCGAGGTGCTGTCCAGCAGGCAGCGCACACGGCAGATaGAGCAGCGGGTCAGGAAGGCCGAGTACTCGGTGGGCGTGCCTG +
Preference number: 5 (lower is better)
Translates to: SGSPRCCPAGSAHGR*SSGSGRPSTRWACL
Trigger: CAGGCACGCCCACCGAGTACTCGGCCTTCCTGACCCGCTGCTTCATCTGCCGTGTGCGCTGCCTGCTGGACAGCACCTCGGGCTTCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS TCA 90 bp CAACATCCCGGGCACCATTCCCTGGCTGTGAGTAGCCCACTGGGGTaGGTCCAAGGGCTCCCGCTTGACCACAGGGGCGGCCTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QHPGHHSLAVSSPLG*VQGLPLDHRGGLSS
Trigger: GCTGCTGAGGCCGCCCCTGTGGTCAAGCGGGAGCCCTTGGACTCACCCCAGTGGGCTACTCACAGCCAGGGAATGGTGCCCGGGATGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 90 bp ATTAAGAGACTCCAACAGCAGCCTTCCCTCCAGCACGGCAGACCCTaGAAGAGGACAGCTGTCTCCGGGCGAGGGGGCGCCGGCCGCAGG +
Preference number: 5 (lower is better)
Translates to: IKRLQQQPSLQHGRP*KRTAVSGRGGAGRR
Trigger: CCTGCGGCCGGCGCCCCCTCGCCCGGAGACAGCTGTCCTCTTGCAGGGTCTGCCGTGCTGGAGGGAAGGCTGCTGTTGGAGTCTCTTAAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000514523.1
ENST00000684583.1
CDS GCA 90 bp CGCGCTCCTCATTTTCATCTCCGCTGCGGAGGGGAGGAGAACGGGTaGCGCAATGCAGAACAGCGACAGCCGCGGCGGGAGCATGGCTCC +
Preference number: 5 (lower is better)
Translates to: RAPHFHLRCGGEENG*RNAEQRQPRREHGS
Trigger: GGAGCCATGCTCCCGCCGCGGCTGTCGCTGTTCTGCATTGCGGCACCCGTTCTCCTCCCCTCCGCAGCGGAGATGAAAATGAGGAGCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS GCA 90 bp AGCTGGTGCTGCAGGCTCCTCTGGGGAAAGTGGCAGAGGGGAGGGTaGACCTGGTCCTCACCGACATCCCGCATGGGTCTGCTGGTCCGG +
Preference number: 5 (lower is better)
Translates to: SWCCRLLWGKWQRGG*TWSSPTSRMGLLVR
Trigger: CCGGACCAGCAGACCCATGCGGGATGTCGGTGAGGACCAGGTGCACCCTCCCCTCTGCCACTTTCCCCAGAGGAGCCTGCAGCACCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS GCA 90 bp CGCTTGGCCCCGGTTCCCCACTCCCTCCTGAGAAGATGTCTAAGTTaGCTGGAGCACCCGCCCACCCGTCTGCCCGCCAAGTGGTGCCCA +
Preference number: 5 (lower is better)
Translates to: RLAPVPHSLLRRCLS*LEHPPTRLPAKWCP
Trigger: TGGGCACCACTTGGCGGGCAGACGGGTGGGCGGGTGCTCCAGGCAACTTAGACATCTTCTCAGGAGGGAGTGGGGAACCGGGGCCAAGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS CCA 90 bp GCATCATCTCCTGTCTCCAAGGGCGGGGGCTGCCCAAACACCACCTaGGGAGGGTCCATGGCCCAGTGGAGCTGCCGGCAGAAGTCCTGG +
Preference number: 5 (lower is better)
Translates to: ASSPVSKGGGCPNTT*GGSMAQWSCRQKSW
Trigger: CCAGGACTTCTGCCGGCAGCTCCACTGGGCCATGGACCCTCCCCAGGTGGTGTTTGGGCAGCCCCCGCCCTTGGAGACAGGAGATGATGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000510910.1
ENST00000684583.1
CDS CCA 90 bp AGGTGGCTGGGTGGCTCCTGTCACTGGCCCCCAGCCACACCTGGCTaGGCACACAGCCGTCTGCAGCACCCTCACACCCAGAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: RWLGGSCHWPPATPG*AHSRLQHPHTQSPS
Trigger: AGAAGGACTCTGGGTGTGAGGGTGCTGCAGACGGCTGTGTGCCCAGCCAGGTGTGGCTGGGGGCCAGTGACAGGAGCCACCCAGCCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 90 bp TCATTTTCATCTCCGCTGCGGAGGGGAGGAGAACGGGTGCCGCAATaGAGAACAGCGACAGCCGCGGCGGGAGCATGGCTCCTGACGGCG +
Preference number: 5 (lower is better)
Translates to: SFSSPLRRGGERVPQ*RTATAAAGAWLLTA
Trigger: CGCCGTCAGGAGCCATGCTCCCGCCGCGGCTGTCGCTGTTCTGCATTGCGGCACCCGTTCTCCTCCCCTCCGCAGCGGAGATGAAAATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS CCA 90 bp CACCATCCTCACTGTGCTTTCCCGCTGTCCAGGGCAGGGGCTTTGTaGGTCCTGGAGTCTCCCTCCGCCCTGTCACTCCAGAGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: HHPHCAFPLSRAGAL*VLESPSALSLQRPC
Trigger: GCAGGGCCTCTGGAGTGACAGGGCGGAGGGAGACTCCAGGACCCACAAAGCCCCTGCCCTGGACAGCGGGAAAGCACAGTGAGGATGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS-3UTR CAA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCATGTCGCTTGGAGGGGTaGGACTTCTCTGCCCCCACG +
Preference number: 5 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAACRLEG*DFSAPT
Trigger: CGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACA...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCTGGTCCAACTCGGCGTaGAGGCGGTCCCGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: QTAHAQLCKACVLGRAPAWSNSA*RRSRCR
Trigger: GCGACACCGGGACCGCCTCAACGCCGAGTTGGACCA...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCATGTGCACCCCGAAGCTaGGGGCGGGACCAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: QHSVACLAATHHSIWHLSCAPRS*GRDQRG
Trigger: GCCACGCTGGTCCCGCCCCAAGCTTCGGGGTGCACA...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACACCGCGGGGTGGGCGTaGCCGACGAGGAGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: ATDASERRHTDLSLDGGHTAGWA*PTRRPL
Trigger: CAGCGGCCTCCTCGTCGGCAACGCCCACCCCGCGGT...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS TCA 90 bp CCCTGGCGGGAACCTGTGCCCATCGGCCAGCGTCAGTCTGTTCCCTaGGCACCAAAACGCCGCTCTCTCTGCTGCTCCTTCCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PWREPVPIGQRQSVP*APKRRSLCCSFLLG
Trigger: CCCCAACAGGAAGGAGCAGCAGAGAGAGCGGCGTTTTGGTGCTCAGGGAACAGACTGACGCTGGCCGATGGGCACAGGTTCCCGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS CCA 90 bp TGTCTAAGTTGCCTGGAGCACCCGCCCACCCGTCTGCCCGCCAAGTaGTGCCCACATCCAGCCTTTCGGGGCAAGCGGGAGGCTAAGAGA +
Preference number: 5 (lower is better)
Translates to: CLSCLEHPPTRLPAK*CPHPAFRGKREAKR
Trigger: TCTCTTAGCCTCCCGCTTGCCCCGAAAGGCTGGATGTGGGCACCACTTGGCGGGCAGACGGGTGGGCGGGTGCTCCAGGCAACTTAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS-3UTR CAA 90 bp AGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCAGCTCCTGAGTCGGGCTGTGCGCAGGACAGAAAGCTaGTCCAGCTTGGAGATGATG +
Preference number: 5 (lower is better)
Translates to: RGSPGSCSGRPQLLSRAVRRTES*SSLEMM
Trigger: CATCATCTCCAAGCTGGACAAGCTTTCTGTCCTGCG...CACAGCCCGACTCAGGAGCTGAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp CAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCGGCCTCCAGGGCAGGGGCTTaGTGGGTCCTGGAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: QTAHAQLCKACVLGRAPASRAGA*WVLESP
Trigger: GGGAGACTCCAGGACCCACAAAGCCCCTGCCCTGGA...GGCCGGAGCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS GCA 90 bp CCTGTCACTGGCCCCCAGCCACACCTGGCTGGGCACACAGCCGTCTaGAGCACCCTCACACCCAGAGTCCTTCTCCATCTTGATGGACAC +
Preference number: 5 (lower is better)
Translates to: PVTGPQPHLAGHTAV*STLTPRVLLHLDGH
Trigger: GTGTCCATCAAGATGGAGAAGGACTCTGGGTGTGAGGGTGCTGCAGACGGCTGTGTGCCCAGCCAGGTGTGGCTGGGGGCCAGTGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 90 bp CCTGTCCTTTGCATCCGCGGTGGCTGCGGTGTCTGCTCTGGGTTTTaGCCTCAGGAGCGCGCTCCTCATTTTCATCTCCGCTGCGGAGGG +
Preference number: 5 (lower is better)
Translates to: PVLCIRGGCGVCSGF*PQERAPHFHLRCGG
Trigger: CCCTCCGCAGCGGAGATGAAAATGAGGAGCGCGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACCGCGGATGCAAAGGACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511487.1
CDS CCA 90 bp GGATGGTGGTCACTGCGCTATGGCAGGAATGTGCACCCCGAAGCTTaGGGCGGGACCAGCGTGGCCAAGGCACTTTTGGGCAACATCCCG +
Preference number: 5 (lower is better)
Translates to: GWWSLRYGRNVHPEA*GGTSVAKALLGNIP
Trigger: CGGGATGTTGCCCAAAAGTGCCTTGGCCACGCTGGTCCCGCCCCAAGCTTCGGGGTGCACATTCCTGCCATAGCGCAGTGACCACCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS-3UTR CAA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACTGTGCACCCCGAAGCTaGGGGCGGGACCAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: ATDASERRHTDLSLDGGHCAPRS*GRDQRG
Trigger: GCCACGCTGGTCCCGCCCCAAGCTTCGGGGTGCACA...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp GGAGGGCCTTGGGCAGGGGCGCATCTAAAGGTCTGGGAGGCTGCAGGGCAGGACCACACAGATCTGAGCTaGGATGGTGGTCACTGCGCT +
Preference number: 5 (lower is better)
Translates to: GGPWAGAHLKVWEAAGQDHTDLS*DGGHCA
Trigger: AGCGCAGTGACCACCATCCAAGCTCAGATCTGTGTG...GTCCTGCCCTGCAGCCTCCCAGACCTTTAGATGCGCCCCTGCCCAAGGCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS TCA 90 bp GCCAAGGCACTTTTGGGCAACATCCCGGGCACCATTCCCTGGCTGTaGGTAGCCCACTGGGGTGAGTCCAAGGGCTCCCGCTTGACCACA +
Preference number: 5 (lower is better)
Translates to: AKALLGNIPGTIPWL*VAHWGESKGSRLTT
Trigger: TGTGGTCAAGCGGGAGCCCTTGGACTCACCCCAGTGGGCTACTCACAGCCAGGGAATGGTGCCCGGGATGTTGCCCAAAAGTGCCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CCA 90 bp CCTCCTCCCTGTCCTTTGCATCCGCGGTGGCTGCGGTGTCTGCTCTaGGTTTTGCCCTCAGGAGCGCGCTCCTCATTTTCATCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: PPPCPLHPRWLRCLL*VLPSGARSSFSSPL
Trigger: CAGCGGAGATGAAAATGAGGAGCGCGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACCGCGGATGCAAAGGACAGGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511487.1
CDS-3UTR CAA 90 bp CCTGGCCCACACCCTCAGGCAGGATACAGTGCGCGGTGCACGCCCAGGGAGTCTCGCAGGACAGAAAGCTaGTCCAGCTTGGAGATGATG +
Preference number: 5 (lower is better)
Translates to: PGPHPQAGYSARCTPRESRRTES*SSLEMM
Trigger: CATCATCTCCAAGCTGGACAAGCTTTCTGTCCTGCG...AGACTCCCTGGGCGTGCACCGCGCACTGTATCCTGCCTGAGGGTGTGGGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGGAGGGCGGGTCATTCTaGCTGGGCTGCAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: THDSTAWRSPFERRPLAKEGGSF*LGCSLG
Trigger: GCCGAGGCTGCAGCCCAGCAAGAATGACCCGCCCTC...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCTCCAAGGGCTCCCGCTaGACCACAGGGGCGGCCTCA +
Preference number: 5 (lower is better)
Translates to: TLADCACTALQSVCLRTGSKGSR*TTGAAS
Trigger: TGAGGCCGCCCCTGTGGTCAAGCGGGAGCCCTTGGA...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCACTGCCTGGCTTCCTCTaGCTTGGGGTGACTTCTACA +
Preference number: 5 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAALPGFL*LGVTST
Trigger: TGTAGAAGTCACCCCAAGCAAGAGGAAGCCAGGCAG...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGAGCAGCTGCCACGTTaGGGACCCAGGCGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSEQLPR*GPRRRP
Trigger: TGGGCGCCGCCTGGGTCCCAAACGTGGCAGCTGCTC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS TCA 90 bp CACAGCCGTCTGCAGCACCCTCACACCCAGAGTCCTTCTCCATCTTaGTGGACACATCTAGCAGCAGCGTCGGACCACACAGGTCCCCCG +
Preference number: 5 (lower is better)
Translates to: HSRLQHPHTQSPSPS*WTHLAAASDHTGPP
Trigger: CGGGGGACCTGTGTGGTCCGACGCTGCTGCTAGATGTGTCCATCAAGATGGAGAAGGACTCTGGGTGTGAGGGTGCTGCAGACGGCTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS GCA 90 bp CTGCTCCTCCTCCCTGTCCTTTGCATCCGCGGTGGCTGCGGTGTCTaGTCTGGGTTTTGCCCTCAGGAGCGCGCTCCTCATTTTCATCTC +
Preference number: 5 (lower is better)
Translates to: LLLLPVLCIRGGCGV*SGFCPQERAPHFHL
Trigger: GAGATGAAAATGAGGAGCGCGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACCGCGGATGCAAAGGACAGGGAGGAGGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511487.1
CDS CCA 90 bp CACGCCGTGCCCCAGGTGCGAGATGTACACCTGTTGCCGAGAGTCTaGCTCTGTTTTCAGGTGCATCCTGGTAGGGAAGGTGGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: HAVPQVRDVHLLPRV*LCFQVHPGREGGWV
Trigger: CACCCAGCCACCTTCCCTACCAGGATGCACCTGAAAACAGAGCCAGACTCTCGGCAACAGGTGTACATCTCGCACCTGGGGCACGGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CCA 90 bp AATGCTCGGGGCCTCCTGAACGACATGGGCCTTCGTTCGCCCGTGTaGTCATCCACATCTTCGGCATCTGCCACTGCCAACCCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: NARGLLNDMGLRSPV*SSTSSASATANPCP
Trigger: AGGACAGGGGTTGGCAGTGGCAGATGCCGAAGATGTGGATGACCACACGGGCGAACGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515206.6
CDS-3UTR CAA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACTCCAGGGCAGGGGCTTaGTGGGTCCTGGAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: ATDASERRHTDLSLDGGHSRAGA*WVLESP
Trigger: GGGAGACTCCAGGACCCACAAAGCCCCTGCCCTGGA...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCAAGGCATCGGTACACCTaGCAGCTTCATGTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAARHRYT*QLHVLH
Trigger: ATGGAGGACATGAAGCTGCAAGGTGTACCGATGCCT...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp TCTCAGGGCCTGGGTGTCCAATGCTCGGGGCCTCCTGAACGACATGGGCCTTCGAAACACACCCTGGCCTaGGAACCCCACGTTATCGTG +
Preference number: 5 (lower is better)
Translates to: SQGLGVQCSGPPERHGPSKHTLA*EPHVIV
Trigger: CACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTT...CGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCATTGGACACCCAGGCCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS GCA 90 bp ACAGATCTGAGCTTGGATGGTGGTCACTGCGCTATGGCAGGAATGTaGACCCCGAAGCTTGGGGCGGGACCAGCGTGGCCAAGGCACTTT +
Preference number: 5 (lower is better)
Translates to: TDLSLDGGHCAMAGM*TPKLGAGPAWPRHF
Trigger: AAAGTGCCTTGGCCACGCTGGTCCCGCCCCAAGCTTCGGGGTGCACATTCCTGCCATAGCGCAGTGACCACCATCCAAGCTCAGATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CCA 90 bp AATGCTCGGGGCCTCCTGAACGACATGGGCCTTCGTTCGCCCGTGTaGTCATCCACATCTTCGGCATCTGCCACTGCCAACCCCTTGGAA +
Preference number: 5 (lower is better)
Translates to: NARGLLNDMGLRSPV*SSTSSASATANPLE
Trigger: TTCCAAGGGGTTGGCAGTGGCAGATGCCGAAGATGTGGATGACCACACGGGCGAACGAAGGCCCATGTCGTTCAGGAGGCCCCGAGCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR CAA 90 bp GTGCACTGTGGCGATGGGCTGACCCTGCCTGCACAGCACAGGCTGGGAGCTGCATCATCGTCCTCGGCCTaGATGTCCTCGTTCGTAAAA +
Preference number: 5 (lower is better)
Translates to: VHCGDGLTLPAQHRLGAASSSSA*MSSFVK
Trigger: TTTTACGAACGAGGACATCAAGGCCGAGGACGATGA...TGCAGCTCCCAGCCTGTGCTGTGCAGGCAGGGTCAGCCCATCGCCACAGTGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GGCCTCTCCTACTGCGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCTGCCCTCTCATCGTCCTCGGCCTaGATGTCCTCGTTCGTAAAA +
Preference number: 5 (lower is better)
Translates to: GLSYCGRGHRALTESSALSSSSA*MSSFVK
Trigger: TTTTACGAACGAGGACATCAAGGCCGAGGACGATGA...GAGGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp CTGGGGTGGCTGCAGCTGGCAGTGCCCACGCGTTTCTCTGGTCAAGAGAATGCGGAAAGCTTGTCCAGCTaGGAGATGATGTCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: LGWLQLAVPTRFSGQENAESLSS*EMMSGG
Trigger: CCCGCCTGACATCATCTCCAAGCTGGACAAGCTTTC...CGCATTCTCTTGACCAGAGAAACGCGTGGGCACTGCCAGCTGCAGCCACCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACGTGGCCAAGGCACTTTaGGGCAACATCCCGGGCACC +
Preference number: 5 (lower is better)
Translates to: ATDASERRHTDLSLDGGHVAKAL*GNIPGT
Trigger: GGTGCCCGGGATGTTGCCCAAAAGTGCCTTGGCCAC...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp AGAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGTGCCGTGCTGCTCTaGACACATGGGCGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: RSSKSEGGPSKWVLDGRVCAVLL*THGRVY
Trigger: ATACACCCGCCCATGTGTCAAGAGCAGCACGGCACA...CACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS GCA 90 bp TGCGAGATGTACACCTGTTGCCGAGAGTCTGGCTCTGTTTTCAGGTaGATCCTGGTAGGGAAGGTGGCTGGGTGGCTCCTGTCACTGGCC +
Preference number: 5 (lower is better)
Translates to: CEMYTCCRESGSVFR*ILVGKVAGWLLSLA
Trigger: GGCCAGTGACAGGAGCCACCCAGCCACCTTCCCTACCAGGATGCACCTGAAAACAGAGCCAGACTCTCGGCAACAGGTGTACATCTCGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 90 bp GCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACTaGGCTATGGCAGGAATGTGCACCCCGAAGCTTGGGGCGGGACCA +
Preference number: 5 (lower is better)
Translates to: ASERRHTDLSLDGGH*AMAGMCTPKLGAGP
Trigger: TGGTCCCGCCCCAAGCTTCGGGGTGCACATTCCTGCCATAGCGCAGTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CCA 90 bp GAACGGGTGCCGCAATGCAGAACAGCGACAGCCGCGGCGGGAGCATaGCTCCTGACGGCGCCTTCTTCTTCTGTCCAAACAGGAATTTTA +
Preference number: 5 (lower is better)
Translates to: ERVPQCRTATAAAGA*LLTAPSSSVQTGIL
Trigger: TAAAATTCCTGTTTGGACAGAAGAAGAAGGCGCCGTCAGGAGCCATGCTCCCGCCGCGGCTGTCGCTGTTCTGCATTGCGGCACCCGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS-3UTR CAA 90 bp GAGTCCTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTTGTCAACTTTCCGGTCCCGGTGTCGCTaGGAGGGGTTGGACTTCTCT +
Preference number: 5 (lower is better)
Translates to: ESSALYPQVWMLPRLSTFRSRCR*EGLDFS
Trigger: AGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCG...GAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAGGACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp CAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAAACCCTTAGTTACAGCTTGTTGGTCCAACTCGGCGTaGAGGCGGTCCCGGTGTCGC +
Preference number: 5 (lower is better)
Translates to: QVGAGWASVLPKPLVTACWSNSA*RRSRCR
Trigger: GCGACACCGGGACCGCCTCAACGCCGAGTTGGACCA...ACAAGCTGTAACTAAGGGTTTTGGAAGCACACTCGCCCATCCAGCACCCACTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCACATGGAGGTCACCTTTaGAAAGACGCCCCCTGGCTA +
Preference number: 5 (lower is better)
Translates to: QHSVACLAATHHSIWHLSHGGHL*KDAPWL
Trigger: TAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATG...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp CAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCAAAACACACCCTGGCCTaGGAACCCCACGTTATCGTG +
Preference number: 5 (lower is better)
Translates to: QVRRGSQQVGAGWASVLPKHTLA*EPHVIV
Trigger: CACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTT...TGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS GCA 90 bp GGTTGCTTGTTCTCAGCAAGGCAGGACCCATCGGCTCCTCAGAAATaGACAGACCAGAGCCCAGGAACGGCACTTGTCCACAGCAGGACA +
Preference number: 5 (lower is better)
Translates to: GCLFSARQDPSAPQK*TDQSPGTALVHSRT
Trigger: TGTCCTGCTGTGGACAAGTGCCGTTCCTGGGCTCTGGTCTGTGCATTTCTGAGGAGCCGATGGGTCCTGCCTTGCTGAGAACAAGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS-3UTR CAA 90 bp TCTCCTACTGCGGAAGAGGGCACCGAGCCCTCACTGAGTCCTCTGCCCTCTACCTCATCGTCCTCGGCCTaGATGTCCTCGTTCGTAAAA +
Preference number: 5 (lower is better)
Translates to: SPTAEEGTEPSLSPLPSTSSSSA*MSSFVK
Trigger: TTTTACGAACGAGGACATCAAGGCCGAGGACGATGA...GGTAGAGGGCAGAGGACTCAGTGAGGGCTCGGTGCCCTCTTCCGCAGTAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp ATGGATGCTGCCTCGCTTGTCAACTTTCACATCAACGAGGAGTGCCAGCTCAGCTGTCGCTTGGAGGGGTaGGACTTCTCTGCCCCCACG +
Preference number: 5 (lower is better)
Translates to: MDAASLVNFHINEECQLSCRLEG*DFSAPT
Trigger: CGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACA...GCTGAGCTGGCACTCCTCGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACTGGTGGCTTTTACTTTaGCATCCGCGGTGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: ATDASERRHTDLSLDGGHWWLLL*HPRWLR
Trigger: CCGCAGCCACCGCGGATGCAAAAGTAAAAGCCACCA...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGCGCAGGCACCTGGCATaGGGCAGAAGACCCAGTCCT +
Preference number: 5 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMRRHLA*GRRPSP
Trigger: AGGACTGGGTCTTCTGCCCAATGCCAGGTGCCTGCG...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp CAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTGCTTCCACAGGATGCACAGAATTaGTCCCAGCTTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: QVRRGSQQVGAGWASVLPQDAQN*SQLLHR
Trigger: CCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTG...TGGAAGCACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCCTGCTCCTGCACGACTaGGAAGAAGCTCTTCACCCG +
Preference number: 5 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSLLLHD*EEALHP
Trigger: CGGGTGAAGAGCTTCTTCCAAGTCGTGCAGGAGCAG...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCTGGTGGCTTTTACTTTaGCATCCGCGGTGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSWWLLL*HPRWLR
Trigger: CCGCAGCCACCGCGGATGCAAAAGTAAAAGCCACCA...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp CAGAGCGAAGCAAGTGACACAGAGGGAGCCCGGGCTCGTGCAGCGGGAGGCCTCACATACTGCATCAAGTaGCTGAATTTCCTATGGCAA +
Preference number: 5 (lower is better)
Translates to: QSEASDTEGARARAAGGLTYCIK*LNFLWQ
Trigger: TTGCCATAGGAAATTCAGCAACTTGATGCAGTATGT...GAGGCCTCCCGCTGCACGAGCCCGGGCTCCCTCTGTGTCACTTGCTTCGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCCGAGATGTACACCTGTaGCCGAGAGTCTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSRDVHL*PRVWLC
Trigger: ACAGAGCCAGACTCTCGGCAACAGGTGTACATCTCG...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GCTGGGCACTCGGTTAGAATAGGAAGGAAGTGGGAAGCTTCTGAAATACCATCCGTCACCAGGAGGGCCTaGGGCAGGGGCGCATCTAAA +
Preference number: 5 (lower is better)
Translates to: AGHSVRIGRKWEASEIPSVTRRA*GRGASK
Trigger: TTTAGATGCGCCCCTGCCCAAGGCCCTCCTGGTGAC...GGATGGTATTTCAGAAGCTTCCCACTTCCTTCCTATTCTAACCGAGTGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp CTCTGCCCTCTACCCACAGGTATGGATGCTGCCTCGCTTGTCAACTTTCACATCTGCCAACCCCTGTCCTaGGAAGAAGCTCTTCACCCG +
Preference number: 5 (lower is better)
Translates to: LCPLPTGMDAASLVNFHICQPLS*EEALHP
Trigger: CGGGTGAAGAGCTTCTTCCAAGGACAGGGGTTGGCA...GATGTGAAAGTTGACAAGCGAGGCAGCATCCATACCTGTGGGTAGAGGGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515206.6
CDS-3UTR CAA 90 bp TCAAGAGAATGCGCCTCTAACCACTTTCTGAGATCACAGAACCCGGGGGCCTCAGCATGTGCCTCAGCCTaGCAAAGCAGGCAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SRECASNHFLRSQNPGASACASA*QSRQVH
Trigger: GTGGACTTGCCTGCTTTGCAAGGCTGAGGCACATGC...TGAGGCCCCCGGGTTCTGTGATCTCAGAAAGTGGTTAGAGGCGCATTCTCTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS GCA 90 bp GCCCAGGAACGGCACTTGTCCACAGCAGGACAGACACCAAGTCTCTaGAAAATGGCTTTTCCATGGAATACGCCAACATCTCCACTGGGC +
Preference number: 5 (lower is better)
Translates to: AQERHLSTAGQTPSL*KMAFPWNTPTSPLG
Trigger: GCCCAGTGGAGATGTTGGCGTATTCCATGGAAAAGCCATTTTGCAGAGACTTGGTGTCTGTCCTGCTGTGGACAAGTGCCGTTCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS-3UTR CAA 90 bp ACACTAGCAGACTGCGCATGCACAGCTCTGCAAAGCGTGTGTCTTAGGACGGGCGAGTCCTTCTCCATCTaGATGGACACATCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: TLADCACTALQSVCLRTGESFSI*MDTSSS
Trigger: GCTGCTAGATGTGTCCATCAAGATGGAGAAGGACTC...GCCCGTCCTAAGACACACGCTTTGCAGAGCTGTGCATGCGCAGTCTGCTAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTAGGCCCCAGTGCTCCTTaGATGACACTGAAGGGCCTG +
Preference number: 5 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLGPSAP*MTLKGL
Trigger: CAGGCCCTTCAGTGTCATCAAAGGAGCACTGGGGCC...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTTGGATGGTGGTCACGAGTTTTTGTTGCCGTaGAGGAAGGGATGTCGGACA +
Preference number: 5 (lower is better)
Translates to: ATDASERRHTDLSLDGGHEFLLP*RKGCRT
Trigger: TGTCCGACATCCCTTCCTCAACGGCAACAAAAACTC...GTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCTGGATGCTGCCTCGCTaGTCAACTTTCACATCAACG +
Preference number: 5 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCWMLPR*STFTST
Trigger: CGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCA...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp CAAAATGAACCGCAAAGAAATGCACTTCCTCTGAGCCAGCGAAGACTGGGGTGGTGTGCCGTGCTGCTCTaGACACATGGGCGGGTGTAT +
Preference number: 5 (lower is better)
Translates to: QNEPQRNALPLSQRRLGWCAVLL*THGRVY
Trigger: ATACACCCGCCCATGTGTCAAGAGCAGCACGGCACA...CCACCCCAGTCTTCGCTGGCTCAGAGGAAGTGCATTTCTTTGCGGTTCATTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGAGGGCGGGTCATTCTaGCTGGGCTGCAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLEGGSF*LGCSLG
Trigger: GCCGAGGCTGCAGCCCAGCAAGAATGACCCGCCCTC...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp CAACACAGCGTGGCCTGCCTGGCAGCAACCCACCACTCAATCTGGCACCTGTCAAGTGGAACATGCATGTaGATTGAGACTTTTTCAGGG +
Preference number: 5 (lower is better)
Translates to: QHSVACLAATHHSIWHLSSGTCM*IETFSG
Trigger: CCCTGAAAAAGTCTCAATCAACATGCATGTTCCACT...TGACAGGTGCCAGATTGAGTGGTGGGTTGCTGCCAGGCAGGCCACGCTGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GGCTCAGATGGTTGGCTGTTCTCTTCCAGTACTGAGAGGAGATCCTTATCCCTAGAAAGCTTGTCCAGCTaGGAGATGATGTCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: GSDGWLFSSSTERRSLSLESLSS*EMMSGG
Trigger: CCCGCCTGACATCATCTCCAAGCTGGACAAGCTTTC...TAGGGATAAGGATCTCCTCTCAGTACTGGAAGAGAACAGCCAACCATCTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTCGCAGGACAGAAAGCTaGTCCAGCTTGGAGATGATG +
Preference number: 5 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSRRTES*SSLEMM
Trigger: CATCATCTCCAAGCTGGACAAGCTTTCTGTCCTGCG...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAGTGGCCAAGGCACTTTaGGGCAACATCCCGGGCACC +
Preference number: 5 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRVAKAL*GNIPGT
Trigger: GGTGCCCGGGATGTTGCCCAAAAGTGCCTTGGCCAC...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGTGTTGTATTTCTAATTaGCCGTGTGCTGGCCTCTAC +
Preference number: 5 (lower is better)
Translates to: THDSTAWRSPFERRPLAKCCISN*PCAGLY
Trigger: GTAGAGGCCAGCACACGGCAAATTAGAAATACAACA...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp ATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACTGCGCATGTCTCTGATTCGATCTTaGGGGCCTGGTGTTTTTCCC +
Preference number: 5 (lower is better)
Translates to: IQDRLLRMLHTHTSRLRMSLIRS*GPGVFP
Trigger: GGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGA...CATGCGCAGTCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GCTCGCCTAGCTGTAGGTCTGTTCATCTGCAAGGAGCATGTGCCTCAGCCTTGCTCACCATTGCCTTCATaGTCCTCACACATCACTACA +
Preference number: 5 (lower is better)
Translates to: ARLAVGLFICKEHVPQPCSPLPS*SSHITT
Trigger: TGTAGTGATGTGTGAGGACAATGAAGGCAATGGTGA...GCAAGGCTGAGGCACATGCTCCTTGCAGATGAACAGACCTACAGCTAGGCGAGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp GAGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAATGGATGCTGCCTCGCTaGTCAACTTTCACATCAACG +
Preference number: 5 (lower is better)
Translates to: EETHPGLGTPRYRGRCNQWMLPR*STFTST
Trigger: CGTTGATGTGAAAGTTGACAAGCGAGGCAGCATCCA...TTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp GAAGCAGCAAGTCAGAAGGGGGTCCCAGCAAGTGGGTGCTGGATGGGCGAGTGTACATACTGCATCAAGTaGCTGAATTTCCTATGGCAA +
Preference number: 5 (lower is better)
Translates to: EAASQKGVPASGCWMGECTYCIK*LNFLWQ
Trigger: TTGCCATAGGAAATTCAGCAACTTGATGCAGTATGT...ACACTCGCCCATCCAGCACCCACTTGCTGGGACCCCCTTCTGACTTGCTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp TCTGCACCAGGATGCACAGAATTTGTCCCAGCTTCTGCACAGGAAAGGTTTAGAGCATGTGCCTCAGCCTaGCAAAGCAGGCAAGTCCAC +
Preference number: 5 (lower is better)
Translates to: SAPGCTEFVPASAQERFRACASA*QSRQVH
Trigger: GTGGACTTGCCTGCTTTGCAAGGCTGAGGCACATGC...TCTAAACCTTTCCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTGGTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACGGTCCCGGTGTCGCTaGGAGGGGTTGGACTTCTCT +
Preference number: 5 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTRSRCR*EGLDFS
Trigger: AGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCG...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp ACCCACGACAGCACAGCATGGAGGTCACCTTTTGAAAGACGCCCCCTGGCTAAGGATAGTCCACGATCGTaGCTGATGCATAAAATATCG +
Preference number: 5 (lower is better)
Translates to: THDSTAWRSPFERRPLAKDSPRS*LMHKIS
Trigger: CGATATTTTATGCATCAGCAACGATCGTGGACTATC...CTTAGCCAGGGGGCGTCTTTCAAAAGGTGACCTCCATGCTGTGCTGTCGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp TCGGGAGATGTCCAGAAGGAACAGGGGTTATGCTGTCAATTCCAGTCCAGGTCTGAGTCCTTCTCCATCTaGATGGACACATCTAGCAGC +
Preference number: 5 (lower is better)
Translates to: SGDVQKEQGLCCQFQSRSESFSI*MDTSSS
Trigger: GCTGCTAGATGTGTCCATCAAGATGGAGAAGGACTC...AGACCTGGACTGGAATTGACAGCATAACCCCTGTTCCTTCTGGACATCTCCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp GCAGCCACGTCTCTGATTCGATCTTTGGGGCCTGGTGTTTTTCCCAGTGACAGCGAAATGCTGTCATGCTaGAATAGACTTAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: AATSLIRSLGPGVFPSDSEMLSC*NRLKAS
Trigger: ACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC...GCTGTCACTGGGAAAAACACCAGGCCCCAAAGATCGAATCAGAGACGTGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp CACACATCACTACAGGCGGTCAGTGGCTATCAGTCCTGCAATATTCACCATCAACAGGATGCACAGAATTaGTCCCAGCTTCTGCACAGG +
Preference number: 5 (lower is better)
Translates to: HTSLQAVSGYQSCNIHHQQDAQN*SQLLHR
Trigger: CCTGTGCAGAAGCTGGGACAAATTCTGTGCATCCTG...TTGATGGTGAATATTGCAGGACTGATAGCCACTGACCGCCTGTAGTGATGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS-3UTR CAA 90 bp TGTTTAACAACCAAATATTCAGTGAATCAGCGTGCGGTGCACAGGTGTACAGATGCCACTGCCAACCCCTaGGAAGAAGCTCTTCACCCG +
Preference number: 5 (lower is better)
Translates to: CLTTKYSVNQRAVHRCTDATANP*EEALHP
Trigger: CGGGTGAAGAGCTTCTTCCAAGGGGTTGGCAGTGGC...ATCTGTACACCTGTGCACCGCACGCTGATTCACTGAATATTTGGTTGTTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS TCA 90 bp TCCATTCTCATGACTCCAGGTAGTTATGTTCCAGGAAGTGAACACTaGGGTGAGTTGGAGACCAACTCACACGGGACATGTGTGTGTACC +
Preference number: 5 (lower is better)
Translates to: SILMTPGSYVPGSEH*GELETNSHGTCVCT
Trigger: GGTACACACACATGTCCCGTGTGAGTTGGTCTCCAACTCACCTCAGTGTTCACTTCCTGGAACATAACTACCTGGAGTCATGAGAATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS-3UTR CAA 90 bp GTTGGCTCCAGGACACTCAAGACATGTGATACACAAGACTCTCAGTCACTGAGCAATGGGAACCCTCATTaGAGTGAACTGTACAGCCAG +
Preference number: 5 (lower is better)
Translates to: VGSRTLKTCDTQDSQSLSNGNPH*SELYSQ
Trigger: CTGGCTGTACAGTTCACTCAAATGAGGGTTCCCATT...GCTCAGTGACTGAGAGTCTTGTGTATCACATGTCTTGAGTGTCCTGGAGCCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp AGGAAACACACCCTGGCCTTGGAACCCCACGTTATCGTGGAAGATGCAACCAAATCACCATTGCCTTCATaGTCCTCACACATCACTACA +
Preference number: 5 (lower is better)
Translates to: RKHTLALEPHVIVEDATKSPLPS*SSHITT
Trigger: TGTAGTGATGTGTGAGGACAATGAAGGCAATGGTGA...TTTGGTTGCATCTTCCACGATAACGTGGGGTTCCAAGGCCAGGGTGTGTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS TCA 90 bp CATTACATCCGTCTGATGGAAGCCCAGATAGTCCACGATCGTTGCTaGTGCATAAAATATCGTCCCTTCTGCACTCACGACCAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: HYIRLMEAQIVHDRC*CIKYRPFCTHDQSK
Trigger: TTTGCTCTGGTCGTGAGTGCAGAAGGGACGATATTTTATGCATCAGCAACGATCGTGGACTATCTGGGCTTCCATCAGACGGATGTAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000514523.1
ENST00000684583.1
CDS-3UTR CAA 90 bp TTGGGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACAAGGCATCGGTACACCTaGCAGCTTCATGTCCTCCAT +
Preference number: 5 (lower is better)
Translates to: LGYFTKFRIGSCVCCTHTRHRYT*QLHVLH
Trigger: ATGGAGGACATGAAGCTGCAAGGTGTACCGATGCCT...TGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS TCA 90 bp GTGGATAGGCCACGTTTCTTGCTATGGTTTCAACTTTCCACCTCCTaGACCATAAGAAGAACCATCGTGTATATTTTGGCTGTTCAGCGG +
Preference number: 5 (lower is better)
Translates to: VDRPRFLLWFQLSTS*TIRRTIVYILAVQR
Trigger: CCGCTGAACAGCCAAAATATACACGATGGTTCTTCTTATGGTTCAGGAGGTGGAAAGTTGAAACCATAGCAAGAAACGTGGCCTATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CAA 90 bp CAAGTTGCTGAATTTCCTATGGCAAGAATTTCCCGATTTTTCAAAAAGCACCAGGAAAGCTTGTCCAGCTaGGAGATGATGTCAGGCGGG +
Preference number: 5 (lower is better)
Translates to: QVAEFPMARISRFFKKHQESLSS*EMMSGG
Trigger: CCCGCCTGACATCATCTCCAAGCTGGACAAGCTTTC...CTGGTGCTTTTTGAAAAATCGGGAAATTCTTGCCATAGGAAATTCAGCAACTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000515206.6
ENST00000652417.2
CDS-3UTR CAA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGCGAGATGTACACCTGTaGCCGAGAGTCTGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGRDVHL*PRVWLC
Trigger: ACAGAGCCAGACTCTCGGCAACAGGTGTACATCTCG...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGCACACAGATCTGAGCTaGGATGGTGGTCACTGCGCT +
Preference number: 5 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGHTDLS*DGGHCA
Trigger: AGCGCAGTGACCACCATCCAAGCTCAGATCTGTGTG...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp GGATATTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTACTTGGGGAGTTTTTGTaGCCGTTGAGGAAGGGATGT +
Preference number: 5 (lower is better)
Translates to: GYFTKFRIGSCVCCTHTLLGEFL*PLRKGC
Trigger: ACATCCCTTCCTCAACGGCAACAAAAACTCCCCAAG...TAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAATATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000316418.10
CDS-3UTR CAA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGACCTTCTGGCCAATGTTaGTCCTTTTCCCTCTTTATC +
Preference number: 5 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSRPSGQC*SFSLFI
Trigger: GATAAAGAGGGAAAAGGACAAACATTGGCCAGAAGG...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CAA 90 bp TTTTACAAAATTCAGGATAGGCTCCTGCGTATGCTGCACACACACACTAGCAGAGAAATGCTGTCATGCTaGAATAGACTTAAGGCCAGT +
Preference number: 5 (lower is better)
Translates to: FYKIQDRLLRMLHTHTSREMLSC*NRLKAS
Trigger: ACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC...TCTGCTAGTGTGTGTGTGCAGCATACGCAGGAGCCTATCCTGAATTTTGTAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000506456.1
CDS-3UTR CAA 90 bp ATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGGGACCATCGTGTATATTTaGGCTGTTCAGCGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: MLSCLNRLKASFHLRTVGTIVYI*AVQRCQ
Trigger: CTGGCACCGCTGAACAGCCAAAATATACACGATGGT...CCCAACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS-3UTR CAA 90 bp GAAATGCTGTCATGCTTGAATAGACTTAAGGCCAGTTTTCATTTAAGAACTGTTGATAGGCCACGTTTCTaGCTATGGTTTCAACTTTCC +
Preference number: 5 (lower is better)
Translates to: EMLSCLNRLKASFHLRTVDRPRF*LWFQLS
Trigger: GGAAAGTTGAAACCATAGCAAGAAACGTGGCCTATC...AACAGTTCTTAAATGAAAACTGGCCTTAAGTCTATTCAAGCATGACAGCATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS GCA 72 bp GCCGACGAGGAGGCCGCTGGGTCCGCAAGGGCCTCCTaGCCGGCACCAGCCGGGCGCCAGAGCGGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: ADEEAAGSARAS*PAPAGRQSGLP
Trigger: TGGGAGGCCGCTCTGGCGCCCGGCTGGTGCCGGGCAGGAGGCCCTTGCGGACCCAGCGGCCTCCTCGTCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS CCA 72 bp GAACCGCGGGGTGGGCGTTGCCGACGAGGAGGCCGCTaGGTCCGCAAGGGCCTCCTGCCCGGCACCAGCCGG +
Preference number: 6 (lower is better)
Translates to: EPRGGRCRRGGR*VRKGLLPGTSR
Trigger: CCGGCTGGTGCCGGGCAGGAGGCCCTTGCGGACCCAGCGGCCTCCTCGTCGGCAACGCCCACCCCGCGGTTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS GCA 72 bp GGCATCCGCTCCGTGGCTGAACCGCGGGGTGGGCGTTaGCGACGAGGAGGCCGCTGGGTCCGCAAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: GIRSVAEPRGGR*RRGGRWVRKGL
Trigger: GAGGCCCTTGCGGACCCAGCGGCCTCCTCGTCGGCAACGCCCACCCCGCGGTTCAGCCACGGAGCGGATGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS TCA 72 bp CCGTTCCGTGCCTGCACACGGCATCCGCTCCGTGGCTaGACCGCGGGGTGGGCGTTGCCGACGAGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: PFRACTRHPLRG*TAGWALPTRRP
Trigger: CGGCCTCCTCGTCGGCAACGCCCACCCCGCGGTTCAGCCACGGAGCGGATGCCGTGTGCAGGCACGGAACGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS GCA 72 bp TCTGCAGGGGCCTCCTCCGCTTCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCATCGTCCTCGGCCGAG +
Preference number: 6 (lower is better)
Translates to: SAGASSASGPRT*TPPAGSSSSAE
Trigger: CTCGGCCGAGGACGATGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGAAGCGGAGGAGGCCCCTGCAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504625.1
CDS GCA 72 bp TCTGCAGGGGCCTCCTCCGCTTCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCATCGTCCTCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SAGASSASGPRT*TPPAGSSSSAQ
Trigger: CTGGGCCGAGGACGATGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGAAGCGGAGGAGGCCCCTGCAGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000514523.1
ENST00000684583.1
CDS GCA 72 bp TCTGCAGGGGCCTCCTCCGCTTCCGGCCCGCGTACGTaGACTCCCCCGGCGGGATCATCGTCCTCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: SAGASSASGPRT*TPPAGSSSSAL
Trigger: CAAGGCCGAGGACGATGATCCCGCCGGGGGAGTGCACGTACGCGGGCCGGAAGCGGAGGAGGCCCCTGCAGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000515206.6
ENST00000652417.2
CDS GCA 72 bp GGGGGCACCTGCAGCGCAACAGCCTCGCCCGTTCCGTaGCTGCACACGGCATCCGCTCCGTGGCTGAACCGC +
Preference number: 6 (lower is better)
Translates to: GGTCSATASPVP*LHTASAPWLNR
Trigger: GCGGTTCAGCCACGGAGCGGATGCCGTGTGCAGGCACGGAACGGGCGAGGCTGTTGCGCTGCAGGTGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS CCA 72 bp TCGCCCGTTCCGTGCCTGCACACGGCATCCGCTCCGTaGCTGAACCGCGGGGTGGGCGTTGCCGACGAGGAG +
Preference number: 6 (lower is better)
Translates to: SPVPCLHTASAP*LNRGVGVADEE
Trigger: CTCCTCGTCGGCAACGCCCACCCCGCGGTTCAGCCACGGAGCGGATGCCGTGTGCAGGCACGGAACGGGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS GCA 72 bp CAGCTGTCTCCGGGCGAGGGGGCGCCGGCCGCAGGCTaGCGTGAGCTCTGCTCCTGCACGACTTGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: QLSPGEGAPAAG*RELCSCTTWKK
Trigger: CTTCTTCCAAGTCGTGCAGGAGCAGAGCTCACGGCAGCCTGCGGCCGGCGCCCCCTCGCCCGGAGACAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000514523.1
ENST00000684583.1
CDS GCA 72 bp CTGGAGCACCCGCCCACCCGTCTGCCCGCCAAGTGGTaGCCACATCCAGCCTTTCGGGGCAAGCGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: LEHPPTRLPAKW*PHPAFRGKREA
Trigger: AGCCTCCCGCTTGCCCCGAAAGGCTGGATGTGGGCACCACTTGGCGGGCAGACGGGTGGGCGGGTGCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS CCA 72 bp GCGGGGGCTGCCCAAACACCACCTGGGGAGGGTCCATaGCCCAGTGGAGCTGCCGGCAGAAGTCCTGGCGGT +
Preference number: 6 (lower is better)
Translates to: AGAAQTPPGEGP*PSGAAGRSPGG
Trigger: ACCGCCAGGACTTCTGCCGGCAGCTCCACTGGGCCATGGACCCTCCCCAGGTGGTGTTTGGGCAGCCCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000510910.1
ENST00000684583.1
CDS CCA 72 bp CCTGTCTCCAAGGGCGGGGGCTGCCCAAACACCACCTaGGGAGGGTCCATGGCCCAGTGGAGCTGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: PVSKGGGCPNTT*GGSMAQWSCRQ
Trigger: CTGCCGGCAGCTCCACTGGGCCATGGACCCTCCCCAGGTGGTGTTTGGGCAGCCCCCGCCCTTGGAGACAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000510910.1
ENST00000684583.1
CDS CCA 72 bp AAGGACAAGGTCAGGGCCACCCCGGAGGCACAGGCATaGGGCCCTGGCGGGAACCTGTGCCCATCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: KDKVRATPEAQA*GPGGNLCPSAS
Trigger: GCTGGCCGATGGGCACAGGTTCCCGCCAGGGCCCCATGCCTGTGCCTCCGGGGTGGCCCTGACCTTGTCCTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CCA 72 bp CCCGCATGGGTCTGCTGGTCCGGCTGGAGTAGGCACTaGGGGACGGGCTCGGCGGGTGAGAGATGGGCGAGT +
Preference number: 6 (lower is better)
Translates to: PAWVCWSGWSRH*GTGSAGERWAS
Trigger: ACTCGCCCATCTCTCACCCGCCGAGCCCGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CAA 90 bp AGGCAGGAGCCGCGGGGCATGGGGCGCAGGGAGGGCGGGTCATTCTaGCTGGGCTGCAGCCTCGGCCTGGCACCATCCTCACTGTGCTTT +
Preference number: 6 (lower is better)
Translates to: RQEPRGMGRREGGSF*LGCSLGLAPSSLCF
Trigger: AAAGCACAGTGAGGATGGTGCCAGGCCGAGGCTGCAGCCCAGCAAGAATGACCCGCCCTCCCTGCGCCCCATGCCCCGCGGCTCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS TCA 72 bp GTCTCCGGGCGAGGGGGCGCCGGCCGCAGGCTGCCGTaGGCTCTGCTCCTGCACGACTTGGAAGAAGCTCTT +
Preference number: 6 (lower is better)
Translates to: VSGRGGAGRRLP*ALLLHDLEEAL
Trigger: AAGAGCTTCTTCCAAGTCGTGCAGGAGCAGAGCTCACGGCAGCCTGCGGCCGGCGCCCCCTCGCCCGGAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000514523.1
ENST00000684583.1
CDS TCA 72 bp GGGACGGGCTCGGCGGGTGAGAGATGGGCGAGTTCCTaGAAGTGCCCTGGACACACGGGCAGGGCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: GTGSAGERWASS*KCPGHTGRAGR
Trigger: CCTGCCTGCCCTGCCCGTGTGTCCAGGGCACTTTCAGGAACTCGCCCATCTCTCACCCGCCGAGCCCGTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS GCA 72 bp CTCCAACAGCAGCCTTCCCTCCAGCACGGCAGACCCTaGAAGAGGACAGCTGTCTCCGGGCGAGGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: LQQQPSLQHGRP*KRTAVSGRGGA
Trigger: GGCGCCCCCTCGCCCGGAGACAGCTGTCCTCTTGCAGGGTCTGCCGTGCTGGAGGGAAGGCTGCTGTTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000514523.1
ENST00000684583.1
CDS GCA 72 bp TCTCCGCTGCGGAGGGGAGGAGAACGGGTGCCGCAATaGAGAACAGCGACAGCCGCGGCGGGAGCATGGCTC +
Preference number: 6 (lower is better)
Translates to: SPLRRGGERVPQ*RTATAAAGAWL
Trigger: GAGCCATGCTCCCGCCGCGGCTGTCGCTGTTCTGCATTGCGGCACCCGTTCTCCTCCCCTCCGCAGCGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS GCA 72 bp CCGGAGGCACAGGCATGGGGCCCTGGCGGGAACCTGTaGCCATCGGCCAGCGTCAGTCTGTTCCCTGAGCAC +
Preference number: 6 (lower is better)
Translates to: PEAQAWGPGGNL*PSASVSLFPEH
Trigger: GTGCTCAGGGAACAGACTGACGCTGGCCGATGGGCACAGGTTCCCGCCAGGGCCCCATGCCTGTGCCTCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 72 bp GGTGCACCTGGTCCTCACCGACATCCCGCATGGGTCTaGTGGTCCGGCTGGAGTAGGCACTGGGGGACGGGC +
Preference number: 6 (lower is better)
Translates to: GAPGPHRHPAWV*WSGWSRHWGTG
Trigger: GCCCGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGGATGTCGGTGAGGACCAGGTGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CCA 72 bp GCACCTGGTCCTCACCGACATCCCGCATGGGTCTGCTaGTCCGGCTGGAGTAGGCACTGGGGGACGGGCTCG +
Preference number: 6 (lower is better)
Translates to: APGPHRHPAWVC*SGWSRHWGTGS
Trigger: CGAGCCCGTCCCCCAGTGCCTACTCCAGCCGGACCAGCAGACCCATGCGGGATGTCGGTGAGGACCAGGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CAA 72 bp TGGTCCAACTCGGCGTTGAGGCGGTCCCGGTGTCGCTaGGAGGGGTTGGACTTCTCTGCCCCCACGGCGGGC +
Preference number: 6 (lower is better)
Translates to: WSNSALRRSRCR*EGLDFSAPTAG
Trigger: GCCCGCCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCGCCTCAACGCCGAGTTGGACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000316418.10
ENST00000504625.1
ENST00000510400.5
ENST00000514523.1
ENST00000515206.6
ENST00000652417.2
ENST00000684583.1
CDS CAA 90 bp CTGGCCAGGTGGTCCAACTCGGCGTTGAGGCGGTCCCGGTGTCGCTaGGAGGGGTTGGACTTCTCTGCCCCCACGGCGGGCCTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: LARWSNSALRRSRCR*EGLDFSAPTAGLCF
Trigger: GAAACAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCGCCTCAACGCCGAGTTGGACCACCTGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316418.10
ENST00000504625.1
ENST00000510400.5
ENST00000515206.6
ENST00000652417.2
ENST00000684583.1
CDS CAA 90 bp GCGCTTGGCCCCGGTTCCCCACTCCCTCCTGAGAAGATGTCTAAGTaGCCTGGAGCACCCGCCCACCCGTCTGCCCGCCAAGTGGTGCCC +
Preference number: 6 (lower is better)
Translates to: ALGPGSPLPPEKMSK*PGAPAHPSARQVVP
Trigger: GGGCACCACTTGGCGGGCAGACGGGTGGGCGGGTGCTCCAGGCAACTTAGACATCTTCTCAGGAGGGAGTGGGGAACCGGGGCCAAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS TCA 72 bp GGGCACCATTCCCTGGCTGTGAGTAGCCCACTGGGGTaGGTCCAAGGGCTCCCGCTTGACCACAGGGGCGGC +
Preference number: 6 (lower is better)
Translates to: GHHSLAVSSPLG*VQGLPLDHRGG
Trigger: GCCGCCCCTGTGGTCAAGCGGGAGCCCTTGGACTCACCCCAGTGGGCTACTCACAGCCAGGGAATGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CAA 72 bp TCGGCGTTGAGGCGGTCCCGGTGTCGCTTGGAGGGGTaGGACTTCTCTGCCCCCACGGCGGGCCTCTGTTTC +
Preference number: 6 (lower is better)
Translates to: SALRRSRCRLEG*DFSAPTAGLCF
Trigger: GAAACAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCGCCTCAACGCCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000316418.10
ENST00000504625.1
ENST00000510400.5
ENST00000515206.6
ENST00000652417.2
ENST00000684583.1
CDS CAA 90 bp GGCCCGCGTACGTGCACTCCCCCGGCGGGATCATCGTCCTCGGCCTaGATGTCCTCGTTCGTAAAATGGGTGACGGTTGCCAGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: GPRTCTPPAGSSSSA*MSSFVKWVTVARPG
Trigger: CCCCGGCCTGGCAACCGTCACCCATTTTACGAACGAGGACATCAAGGCCGAGGACGATGATCCCGCCGGGGGAGTGCACGTACGCGGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316418.10
ENST00000510400.5
CDS CAA 90 bp CTGGCCAGGTGGTCCAACTCGGCGTTGAGGCGGTCCCGGTGTCGCTaGGAGGGGTTGGACTTCTCTGCCCCCACGGCGGGCCTCTTTACT +
Preference number: 6 (lower is better)
Translates to: LARWSNSALRRSRCR*EGLDFSAPTAGLFT
Trigger: AGTAAAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCGCCTCAACGCCGAGTTGGACCACCTGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514523.1
CDS TCA 72 bp CCGAGGTGCTGTCCAGCAGGCAGCGCACACGGCAGATaGAGCAGCGGGTCAGGAAGGCCGAGTACTCGGTGG +
Preference number: 6 (lower is better)
Translates to: PRCCPAGSAHGR*SSGSGRPSTRW
Trigger: CCACCGAGTACTCGGCCTTCCTGACCCGCTGCTTCATCTGCCGTGTGCGCTGCCTGCTGGACAGCACCTCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS GCA 72 bp AACACCACCTGGGGAGGGTCCATGGCCCAGTGGAGCTaGCGGCAGAAGTCCTGGCGGTCGTCCACGTGGATG +
Preference number: 6 (lower is better)
Translates to: NTTWGGSMAQWS*RQKSWRSSTWM
Trigger: CATCCACGTGGACGACCGCCAGGACTTCTGCCGGCAGCTCCACTGGGCCATGGACCCTCCCCAGGTGGTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000510910.1
ENST00000684583.1
CDS CAA 72 bp TCGGCGTTGAGGCGGTCCCGGTGTCGCTTGGAGGGGTaGGACTTCTCTGCCCCCACGGCGGGCCTCTTTACT +
Preference number: 6 (lower is better)
Translates to: SALRRSRCRLEG*DFSAPTAGLFT
Trigger: AGTAAAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCGCCTCAACGCCGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514523.1
CDS CAA 90 bp TGGCACCATCCTCACTGTGCTTTCCCGCTGTCCAGGGCAGGGGCTTaGTGGGTCCTGGAGTCTCCCTCCGCCCTGTCACTCCAGAGGCCC +
Preference number: 6 (lower is better)
Translates to: WHHPHCAFPLSRAGA*WVLESPSALSLQRP
Trigger: GGGCCTCTGGAGTGACAGGGCGGAGGGAGACTCCAGGACCCACAAAGCCCCTGCCCTGGACAGCGGGAAAGCACAGTGAGGATGGTGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS GCA 72 bp CATTTTCATCTCCGCTGCGGAGGGGAGGAGAACGGGTaGCGCAATGCAGAACAGCGACAGCCGCGGCGGGAG +
Preference number: 6 (lower is better)
Translates to: HFHLRCGGEENG*RNAEQRQPRRE
Trigger: CTCCCGCCGCGGCTGTCGCTGTTCTGCATTGCGGCACCCGTTCTCCTCCCCTCCGCAGCGGAGATGAAAATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS GCA 72 bp CTGCTCCTCCTCCCTGTCCTTTGCATCCGCGGTGGCTaGGGTGTCTGCTCTGGGTTTTGCCCTCAGGAGCGC +
Preference number: 6 (lower is better)
Translates to: LLLLPVLCIRGG*GVCSGFCPQER
Trigger: GCGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACCGCGGATGCAAAGGACAGGGAGGAGGAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511487.1
CDS GCA 72 bp GCGGTCCCGGTGTCGCTTGGAGGGGTTGGACTTCTCTaGCCCCACGGCGGGCCTCTTTACTGTTTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: AVPVSLGGVGLL*PHGGPLYCFCR
Trigger: CCTGCAGAAACAGTAAAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514523.1
CDS GCA 72 bp CCGGTTCCCCACTCCCTCCTGAGAAGATGTCTAAGTTaGCTGGAGCACCCGCCCACCCGTCTGCCCGCCAAG +
Preference number: 6 (lower is better)
Translates to: PVPHSLLRRCLS*LEHPPTRLPAK
Trigger: CTTGGCGGGCAGACGGGTGGGCGGGTGCTCCAGGCAACTTAGACATCTTCTCAGGAGGGAGTGGGGAACCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS CCA 72 bp CACTGTGCTTTCCCGCTGTCCAGGGCAGGGGCTTTGTaGGTCCTGGAGTCTCCCTCCGCCCTGTCACTCCAG +
Preference number: 6 (lower is better)
Translates to: HCAFPLSRAGAL*VLESPSALSLQ
Trigger: CTGGAGTGACAGGGCGGAGGGAGACTCCAGGACCCACAAAGCCCCTGCCCTGGACAGCGGGAAAGCACAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CCA 72 bp AGGGCGGGTCATTCTTGCTGGGCTGCAGCCTCGGCCTaGCACCATCCTCACTGTGCTTTCCCGCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: RAGHSCWAAASA*HHPHCAFPLSR
Trigger: CCTGGACAGCGGGAAAGCACAGTGAGGATGGTGCCAGGCCGAGGCTGCAGCCCAGCAAGAATGACCCGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CAA 72 bp CCTCACTGTGCTTTCCCGCTGTCCAGGGCAGGGGCTTaGTGGGTCCTGGAGTCTCCCTCCGCCCTGTCACTC +
Preference number: 6 (lower is better)
Translates to: PHCAFPLSRAGA*WVLESPSALSL
Trigger: GAGTGACAGGGCGGAGGGAGACTCCAGGACCCACAAAGCCCCTGCCCTGGACAGCGGGAAAGCACAGTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CAA 72 bp CCCGGTTCCCCACTCCCTCCTGAGAAGATGTCTAAGTaGCCTGGAGCACCCGCCCACCCGTCTGCCCGCCAA +
Preference number: 6 (lower is better)
Translates to: PGSPLPPEKMSK*PGAPAHPSARQ
Trigger: TTGGCGGGCAGACGGGTGGGCGGGTGCTCCAGGCAACTTAGACATCTTCTCAGGAGGGAGTGGGGAACCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS GCA 72 bp AGCTTGGATGGTGGTCACTGCGCTATGGCAGGAATGTaGACCCCGAAGCTTGGGGCGGGACCAGCGTGGCCA +
Preference number: 6 (lower is better)
Translates to: SLDGGHCAMAGM*TPKLGAGPAWP
Trigger: TGGCCACGCTGGTCCCGCCCCAAGCTTCGGGGTGCACATTCCTGCCATAGCGCAGTGACCACCATCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 72 bp CTCCCTGTCCTTTGCATCCGCGGTGGCTGCGGTGTCTaGTCTGGGTTTTGCCCTCAGGAGCGCGCTCCTCAT +
Preference number: 6 (lower is better)
Translates to: LPVLCIRGGCGV*SGFCPQERAPH
Trigger: ATGAGGAGCGCGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACCGCGGATGCAAAGGACAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511487.1
CDS CCA 72 bp AAGCTTGGGGCGGGACCAGCGTGGCCAAGGCACTTTTaGGCAACATCCCGGGCACCATTCCCTGGCTGTGAG +
Preference number: 6 (lower is better)
Translates to: KLGAGPAWPRHF*ATSRAPFPGCE
Trigger: CTCACAGCCAGGGAATGGTGCCCGGGATGTTGCCCAAAAGTGCCTTGGCCACGCTGGTCCCGCCCCAAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CCA 72 bp TCACTGCGCTATGGCAGGAATGTGCACCCCGAAGCTTaGGGCGGGACCAGCGTGGCCAAGGCACTTTTGGGC +
Preference number: 6 (lower is better)
Translates to: SLRYGRNVHPEA*GGTSVAKALLG
Trigger: GCCCAAAAGTGCCTTGGCCACGCTGGTCCCGCCCCAAGCTTCGGGGTGCACATTCCTGCCATAGCGCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CAA 90 bp TGGTCCAACTCGGCGTTGAGGCGGTCCCGGTGTCGCTTGGAGGGGTaGGACTTCTCTGCCCCCACGGCGGGCCTCTTTACTGTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: WSNSALRRSRCRLEG*DFSAPTAGLFTVSA
Trigger: TGCAGAAACAGTAAAGAGGCCCGCCGTGGGGGCAGAGAAGTCCAACCCCTCCAAGCGACACCGGGACCGCCTCAACGCCGAGTTGGACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514523.1
CDS GCA 72 bp TGCCCTCAGGAGCGCGCTCCTCATTTTCATCTCCGCTaGGGAGGGGAGGAGAACGGGTGCCGCAATGCAGAA +
Preference number: 6 (lower is better)
Translates to: CPQERAPHFHLR*GGEENGCRNAE
Trigger: TTCTGCATTGCGGCACCCGTTCTCCTCCCCTCCGCAGCGGAGATGAAAATGAGGAGCGCGCTCCTGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS GCA 72 bp TGCATCCGCGGTGGCTGCGGTGTCTGCTCTGGGTTTTaGCCTCAGGAGCGCGCTCCTCATTTTCATCTCCGC +
Preference number: 6 (lower is better)
Translates to: CIRGGCGVCSGF*PQERAPHFHLR
Trigger: GCGGAGATGAAAATGAGGAGCGCGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACCGCGGATGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000511487.1
ENST00000684583.1
CDS CCA 72 bp CCGCAATGCAGAACAGCGACAGCCGCGGCGGGAGCATaGCTCCTGACGGCGCCTTCTTCTTCTGTCCAAACA +
Preference number: 6 (lower is better)
Translates to: PQCRTATAAAGA*LLTAPSSSVQT
Trigger: TGTTTGGACAGAAGAAGAAGGCGCCGTCAGGAGCCATGCTCCCGCCGCGGCTGTCGCTGTTCTGCATTGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS CCA 72 bp TGTGCTGCTCCTCCTCCCTGTCCTTTGCATCCGCGGTaGCTGCGGTGTCTGCTCTGGGTTTTGCCCTCAGGA +
Preference number: 6 (lower is better)
Translates to: CAAPPPCPLHPR*LRCLLWVLPSG
Trigger: TCCTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACCGCGGATGCAAAGGACAGGGAGGAGGAGCAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511487.1
CDS CAA 72 bp CCGCACGCCGTGCCCCAGGTGCGAGATGTACACCTGTaGCCGAGAGTCTGGCTCTGTTTTCAGGTGCATCCT +
Preference number: 6 (lower is better)
Translates to: PHAVPQVRDVHL*PRVWLCFQVHP
Trigger: AGGATGCACCTGAAAACAGAGCCAGACTCTCGGCAACAGGTGTACATCTCGCACCTGGGGCACGGCGTGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CAA 72 bp ACGGTGCGAGCTGAGGAGCTCCTGGAAGACGGTTGCTaGTTCTCAGCAAGGCAGGACCCATCGGCTCCTCAG +
Preference number: 6 (lower is better)
Translates to: TVRAEELLEDGC*FSARQDPSAPQ
Trigger: CTGAGGAGCCGATGGGTCCTGCCTTGCTGAGAACAAGCAACCGTCTTCCAGGAGCTCCTCAGCTCGCACCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS CAA 90 bp ACACAGCCGTCTGCAGCACCCTCACACCCAGAGTCCTTCTCCATCTaGATGGACACATCTAGCAGCAGCGTCGGACCACACAGGTCCCCC +
Preference number: 6 (lower is better)
Translates to: TQPSAAPSHPESFSI*MDTSSSSVGPHRSP
Trigger: GGGGGACCTGTGTGGTCCGACGCTGCTGCTAGATGTGTCCATCAAGATGGAGAAGGACTCTGGGTGTGAGGGTGCTGCAGACGGCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CAA 90 bp GCAAGTCACAGCCACAGGGAGAGAATCCCACCGAAGAGACGGCGCTaGGCCCCGGTTCCCCACTCCCTCCTGAGAAGATGTCTAAGTTGC +
Preference number: 6 (lower is better)
Translates to: ASHSHRERIPPKRRR*APVPHSLLRRCLSC
Trigger: GCAACTTAGACATCTTCTCAGGAGGGAGTGGGGAACCGGGGCCAAGCGCCGTCTCTTCGGTGGGATTCTCTCCCTGTGGCTGTGACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS TCA 72 bp GCAGAACAGCGACAGCCGCGGCGGGAGCATGGCTCCTaGCGGCGCCTTCTTCTTCTGTCCAAACAGGAATTT +
Preference number: 6 (lower is better)
Translates to: AEQRQPRREHGS*RRLLLLSKQEF
Trigger: AAATTCCTGTTTGGACAGAAGAAGAAGGCGCCGTCAGGAGCCATGCTCCCGCCGCGGCTGTCGCTGTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000684583.1
CDS CCA 72 bp CTTGCAGCTTCATGTCCTCCATGGGATAGCCCCTCGTaGCAAAACGCTGAGCTCCAGGCTGAGGGAGCTGGT +
Preference number: 6 (lower is better)
Translates to: LAASCPPWDSPS*QNAELQAEGAG
Trigger: ACCAGCTCCCTCAGCCTGGAGCTCAGCGTTTTGCCACGAGGGGCTATCCCATGGAGGACATGAAGCTGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS CCA 72 bp TGTCCTTTGCATCCGCGGTGGCTGCGGTGTCTGCTCTaGGTTTTGCCCTCAGGAGCGCGCTCCTCATTTTCA +
Preference number: 6 (lower is better)
Translates to: CPLHPRWLRCLL*VLPSGARSSFS
Trigger: TGAAAATGAGGAGCGCGCTCCTGAGGGCAAAACCCAGAGCAGACACCGCAGCCACCGCGGATGCAAAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511487.1
CDS CAA 90 bp AGCCCAGCCACCGACGCATCTGAGCGTAGACACACAGATCTGAGCTaGGATGGTGGTCACTGCGCTATGGCAGGAATGTGCACCCCGAAG +
Preference number: 6 (lower is better)
Translates to: SPATDASERRHTDLS*DGGHCAMAGMCTPK
Trigger: CTTCGGGGTGCACATTCCTGCCATAGCGCAGTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGCTGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CAA 90 bp GAAGCCGTCACGGTGCGAGCTGAGGAGCTCCTGGAAGACGGTTGCTaGTTCTCAGCAAGGCAGGACCCATCGGCTCCTCAGAAATGCACA +
Preference number: 6 (lower is better)
Translates to: EAVTVRAEELLEDGC*FSARQDPSAPQKCT
Trigger: TGTGCATTTCTGAGGAGCCGATGGGTCCTGCCTTGCTGAGAACAAGCAACCGTCTTCCAGGAGCTCCTCAGCTCGCACCGTGACGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS GCA 72 bp TACACCTGTTGCCGAGAGTCTGGCTCTGTTTTCAGGTaGATCCTGGTAGGGAAGGTGGCTGGGTGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: YTCCRESGSVFR*ILVGKVAGWLL
Trigger: CAGGAGCCACCCAGCCACCTTCCCTACCAGGATGCACCTGAAAACAGAGCCAGACTCTCGGCAACAGGTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 72 bp TTCTCAGCAAGGCAGGACCCATCGGCTCCTCAGAAATaGACAGACCAGAGCCCAGGAACGGCACTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: FSARQDPSAPQK*TDQSPGTALVH
Trigger: GTGGACAAGTGCCGTTCCTGGGCTCTGGTCTGTGCATTTCTGAGGAGCCGATGGGTCCTGCCTTGCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS GCA 72 bp TCGTTCGCCCGTGTGGTCATCCACATCTTCGGCATCTaGCACTGCCAACCCCTTGGAAGAAGCTCTTCACCC +
Preference number: 6 (lower is better)
Translates to: SFARVVIHIFGI*HCQPLGRSSSP
Trigger: GGGTGAAGAGCTTCTTCCAAGGGGTTGGCAGTGGCAGATGCCGAAGATGTGGATGACCACACGGGCGAACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652417.2
CDS CCA 72 bp GCTAAGAGACGGGCATCTTCTGGGCCGCAGACACTCTaGGGCCAAGACATCCACTTTCCTGTCGACTTGGAC +
Preference number: 6 (lower is better)
Translates to: AKRRASSGPQTL*GQDIHFPVDLD
Trigger: GTCCAAGTCGACAGGAAAGTGGATGTCTTGGCCCCAGAGTGTCTGCGGCCCAGAAGATGCCCGTCTCTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS TCA 72 bp CTGCAGCACCCTCACACCCAGAGTCCTTCTCCATCTTaGTGGACACATCTAGCAGCAGCGTCGGACCACACA +
Preference number: 6 (lower is better)
Translates to: LQHPHTQSPSPS*WTHLAAASDHT
Trigger: TGTGTGGTCCGACGCTGCTGCTAGATGTGTCCATCAAGATGGAGAAGGACTCTGGGTGTGAGGGTGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS TCA 72 bp CAGCCACCGACGCATCTGAGCGTAGACACACAGATCTaGGCTTGGATGGTGGTCACTGCGCTATGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: QPPTHLSVDTQI*AWMVVTALWQE
Trigger: TTCCTGCCATAGCGCAGTGACCACCATCCAAGCTCAGATCTGTGTGTCTACGCTCAGATGCGTCGGTGGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 72 bp CGTAGACACACAGATCTGAGCTTGGATGGTGGTCACTaGGCTATGGCAGGAATGTGCACCCCGAAGCTTGGG +
Preference number: 6 (lower is better)
Translates to: RRHTDLSLDGGH*AMAGMCTPKLG
Trigger: CCCAAGCTTCGGGGTGCACATTCCTGCCATAGCGCAGTGACCACCATCCAAGCTCAGATCTGTGTGTCTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS GCA 72 bp TCGTTCGCCCGTGTGGTCATCCACATCTTCGGCATCTaGCACTGCCAACCCCTGTCCTTGGAAGAAGCTCTT +
Preference number: 6 (lower is better)
Translates to: SFARVVIHIFGI*HCQPLSLEEAL
Trigger: AAGAGCTTCTTCCAAGGACAGGGGTTGGCAGTGGCAGATGCCGAAGATGTGGATGACCACACGGGCGAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000515206.6
CDS CCA 72 bp CCCCAGGTGCGAGATGTACACCTGTTGCCGAGAGTCTaGCTCTGTTTTCAGGTGCATCCTGGTAGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: PQVRDVHLLPRV*LCFQVHPGREG
Trigger: ACCTTCCCTACCAGGATGCACCTGAAAACAGAGCCAGACTCTCGGCAACAGGTGTACATCTCGCACCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000684583.1
CDS CAA 72 bp TCTGCAGCACCCTCACACCCAGAGTCCTTCTCCATCTaGATGGACACATCTAGCAGCAGCGTCGGACCACAC +
Preference number: 6 (lower is better)
Translates to: SAAPSHPESFSI*MDTSSSSVGPH
Trigger: GTGTGGTCCGACGCTGCTGCTAGATGTGTCCATCAAGATGGAGAAGGACTCTGGGTGTGAGGGTGCTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000316418.10
ENST00000506456.1
ENST00000507048.1
ENST00000511487.1
ENST00000684583.1
CDS GCA 72 bp AGAAGAACCATCGTGTATATTTTGGCTGTTCAGCGGTaGCAGCGTATGTGCGCCTGTGTGGGTGGGTGGCTG +
Preference number: 6 (lower is better)
Translates to: RRTIVYILAVQR*QRMCACVGGWL
Trigger: CAGCCACCCACCCACACAGGCGCACATACGCTGGCACCGCTGAACAGCCAAAATATACACGATGGTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS GCA 72 bp CTCCTCTTCCAGTTAAGGCGCGAACGCTCCAGCCGCTaGACCTTCTGGCCAATGTTTGTCCTTTTCCCTCTT +
Preference number: 6 (lower is better)
Translates to: LLFQLRRERSSR*TFWPMFVLFPL
Trigger: AAGAGGGAAAAGGACAAACATTGGCCAGAAGGTGCAGCGGCTGGAGCGTTCGCGCCTTAACTGGAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS CAA 72 bp CTCAGAAATGCACAGACCAGAGCCCAGGAACGGCACTaGTCCACAGCAGGACAGACACCAAGTCTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: LRNAQTRAQERH*STAGQTPSLCK
Trigger: TTTGCAGAGACTTGGTGTCTGTCCTGCTGTGGACAAGTGCCGTTCCTGGGCTCTGGTCTGTGCATTTCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS CAA 90 bp GGTGCATTACATCCGTCTGATGGAAGCCCAGATAGTCCACGATCGTaGCTGATGCATAAAATATCGTCCCTTCTGCACTCACGACCAGAG +
Preference number: 6 (lower is better)
Translates to: GALHPSDGSPDSPRS*LMHKISSLLHSRPE
Trigger: CTCTGGTCGTGAGTGCAGAAGGGACGATATTTTATGCATCAGCAACGATCGTGGACTATCTGGGCTTCCATCAGACGGATGTAATGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000514523.1
ENST00000684583.1
CDS TCA 72 bp CGTCTGATGGAAGCCCAGATAGTCCACGATCGTTGCTaGTGCATAAAATATCGTCCCTTCTGCACTCACGAC +
Preference number: 6 (lower is better)
Translates to: RLMEAQIVHDRC*CIKYRPFCTHD
Trigger: GTCGTGAGTGCAGAAGGGACGATATTTTATGCATCAGCAACGATCGTGGACTATCTGGGCTTCCATCAGACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000514523.1
ENST00000684583.1
CDS GCA 72 bp CGGCACTTGTCCACAGCAGGACAGACACCAAGTCTCTaGAAAATGGCTTTTCCATGGAATACGCCAACATCT +
Preference number: 6 (lower is better)
Translates to: RHLSTAGQTPSL*KMAFPWNTPTS
Trigger: AGATGTTGGCGTATTCCATGGAAAAGCCATTTTGCAGAGACTTGGTGTCTGTCCTGCTGTGGACAAGTGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS CCA 72 bp GTAGTTATGTTCCAGGAAGTGAACACTGAGGTGAGTTaGAGACCAACTCACACGGGACATGTGTGTGTACCC +
Preference number: 6 (lower is better)
Translates to: VVMFQEVNTEVS*RPTHTGHVCVP
Trigger: GGGTACACACACATGTCCCGTGTGAGTTGGTCTCCAACTCACCTCAGTGTTCACTTCCTGGAACATAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS CCA 72 bp TGTCCACAGCAGGACAGACACCAAGTCTCTGCAAAATaGCTTTTCCATGGAATACGCCAACATCTCCACTGG +
Preference number: 6 (lower is better)
Translates to: CPQQDRHQVSAK*LFHGIRQHLHW
Trigger: CCAGTGGAGATGTTGGCGTATTCCATGGAAAAGCCATTTTGCAGAGACTTGGTGTCTGTCCTGCTGTGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS CAA 72 bp CATCCGTCTGATGGAAGCCCAGATAGTCCACGATCGTaGCTGATGCATAAAATATCGTCCCTTCTGCACTCA +
Preference number: 6 (lower is better)
Translates to: HPSDGSPDSPRS*LMHKISSLLHS
Trigger: TGAGTGCAGAAGGGACGATATTTTATGCATCAGCAACGATCGTGGACTATCTGGGCTTCCATCAGACGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316418.10
ENST00000510400.5
ENST00000514523.1
ENST00000684583.1
CDS CAA 72 bp TTCCACCGACGAGTAACCGAAAAATTTCCACTCCACTaGTCAAAGCAAGTCACAGCCACAGGGAGAGAATCC +
Preference number: 6 (lower is better)
Translates to: FHRRVTEKFPLH*SKQVTATGRES
Trigger: GGATTCTCTCCCTGTGGCTGTGACTTGCTTTGACAAGTGGAGTGGAAATTTTTCGGTTACTCGTCGGTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS CAA 90 bp GACACTTTATTCCACCGACGAGTAACCGAAAAATTTCCACTCCACTaGTCAAAGCAAGTCACAGCCACAGGGAGAGAATCCCACCGAAGA +
Preference number: 6 (lower is better)
Translates to: DTLFHRRVTEKFPLH*SKQVTATGRESHRR
Trigger: TCTTCGGTGGGATTCTCTCCCTGTGGCTGTGACTTGCTTTGACAAGTGGAGTGGAAATTTTTCGGTTACTCGTCGGTGGAATAAAGTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510910.1
CDS TCA 72 bp CCTGGAAGGCCAGAAAGAAAATACGGTCCATTCTCATaGCTCCAGGTAGTTATGTTCCAGGAAGTGAACACT +
Preference number: 6 (lower is better)
Translates to: PGRPERKYGPFS*LQVVMFQEVNT
Trigger: AGTGTTCACTTCCTGGAACATAACTACCTGGAGTCATGAGAATGGACCGTATTTTCTTTCTGGCCTTCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507048.1
CDS TCA 72 bp CCACGTTTCTTGCTATGGTTTCAACTTTCCACCTCCTaGACCATAAGAAGAACCATCGTGTATATTTTGGCT +
Preference number: 6 (lower is better)
Translates to: PRFLLWFQLSTS*TIRRTIVYILA
Trigger: AGCCAAAATATACACGATGGTTCTTCTTATGGTTCAGGAGGTGGAAAGTTGAAACCATAGCAAGAAACGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506456.1
CDS TCA 72 bp GTAGAAATTAATAATGACAGGTATTGCTGTCACACCTaGGCAGTGAAGACAGAAACAATAGTTCACTCTTGT +
Preference number: 6 (lower is better)
Translates to: VEINNDRYCCHT*AVKTETIVHSC
Trigger: ACAAGAGTGAACTATTGTTTCTGTCTTCACTGCTCAGGTGTGACAGCAATACCTGTCATTATTAATTTCTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507048.1