RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AHCYL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000158467

Ensembl transcript IDs: ENST00000325006.7, ENST00000446544.6, ENST00000460109.5, ENST00000461161.5, ENST00000466924.1, ENST00000466993.5, ENST00000472554.5, ENST00000474594.5, ENST00000490911.5, ENST00000491079.1

Found 487 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTaGAACACTGGCCATGTTAATTCCAAACGGCCTCACCCGGGGAAG +
Preference number: 1 (lower is better)
Translates to: EGSDSDGQDWEPNLV*NTGHVNSKRPHPGK
Trigger: CTTCCCCGGGTGAGGCCGTTTGGAATTAACATGGCCAGTGTTTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR TCA 90 bp CAAGGAAGTAAAACTATGGGTCCCAGTGGAGCTGGCCCCACTTCCTaGGCAGACGTTGGCTGGATTAGAAAGACAGCAGAACAAATGTCT +
Preference number: 1 (lower is better)
Translates to: QGSKTMGPSGAGPTS*ADVGWIRKTAEQMS
Trigger: AGACATTTGTTCTGCTGTCTTTCTAATCCAGCCAACGTCTGCTCAGGAAGTGGGGCCAGCTCCACTGGGACCCATAGTTTTACTTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CCA 90 bp GGTAGAAGAAGAGAATCAGGATGGGAAGGTTTTGGTGATCATGCGTaGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGG +
Preference number: 1 (lower is better)
Translates to: GRRRESGWEGFGDHA*SGVILSHLGLETLR
Trigger: CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATCACCAAAACCTTCCCATCCTGATTCTCTTCTTCTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR GCA 90 bp CAGTCAAACTGCAATGGCCTTCCTGGGAAACAAATAAATATACTCTaGTTTGTTAGGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCA +
Preference number: 1 (lower is better)
Translates to: QSNCNGLPGKQINIL*FVRVSSCESERPVP
Trigger: TGGGACAGGTCTTTCAGACTCACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCCATTGCAGTTTGACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR GCA 90 bp GGCCAGTCCAGACTAACTCTTAGAACCAATCTGGTCCTAATGAAATaGCTGAGACCAACAGATCAGTCTCCAAAAGGAATCCAATTTTTG +
Preference number: 1 (lower is better)
Translates to: GQSRLTLRTNLVLMK*LRPTDQSPKGIQFL
Trigger: CAAAAATTGGATTCCTTTTGGAGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGTTAGTCTGGACTGGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCAACTATGGGTCCCAGTaGAGCTGGCCCCACTTCCTG +
Preference number: 2 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPNYGSQ*SWPHFL
Trigger: CAGGAAGTGGGGCCAGCTCCACTGGGACCCATAGTT...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATGGGGAAGGGCCAAGCTaGGAAAAGCAGGTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYGEGPS*EKQVLK
Trigger: TTTCAGCACCTGCTTTTCTCAGCTTGGCCCTTCCCC...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGGGTCCCAGTGGAGCTaGCCCCACTTCCTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSGSQWS*PHFLSR
Trigger: TCTGCTCAGGAAGTGGGGCCAGCTCCACTGGGACCC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCAAGGAAGTAAAACTATaGGTCCCAGTGGAGCTGGCC +
Preference number: 2 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPKEVKL*VPVELA
Trigger: GGCCAGCTCCACTGGGACCCATAGTTTTACTTCCTT...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCGAGATAGTGCCAATCTaGAGGGGCTTCCTTGGAAAC +
Preference number: 2 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPEIVPI*RGFLGN
Trigger: GTTTCCAAGGAAGCCCCTCCAGATTGGCACTATCTC...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CAA 90 bp AAACTATGGGTCCCAGTGGAGCTGGCCCCACTTCCTGAGCAGACGTaGGCTGGATTAGAAAGACAGCAGAACAAATGTCTGACAAATACC +
Preference number: 2 (lower is better)
Translates to: KLWVPVELAPLPEQT*AGLERQQNKCLTNT
Trigger: GGTATTTGTCAGACATTTGTTCTGCTGTCTTTCTAATCCAGCCAACGTCTGCTCAGGAAGTGGGGCCAGCTCCACTGGGACCCATAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCCCTGGACTAACTCGTaGGCCTGGACAAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: DHAWSGVILSHLGLETLRPWTNS*AWTRGK
Trigger: TTTTCCTCTTGTCCAGGCTCACGAGTTAGTCCAGGG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR GCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATCTCAGCCAGTCAAACTaGAATGGCCTTCCTGGGAAA +
Preference number: 2 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYLSQSN*NGLPGK
Trigger: TTTCCCAGGAAGGCCATTGCAGTTTGACTGGCTGAG...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCGCAGTAACCACACTCTaGGCCAACACTACAGGCACA +
Preference number: 2 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFAVTTL*ANTTGT
Trigger: TGTGCCTGTAGTGTTGGCCCAGAGTGTGGTTACTGC...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAAACTATGGGTCCCAGTaGAGCTGGCCCCACTTCCTG +
Preference number: 2 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLNYGSQ*SWPHFL
Trigger: CAGGAAGTGGGGCCAGCTCCACTGGGACCCATAGTT...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CAA 90 bp TCAGGATGGGAAGGTTTTGGTGATCATGCGTGGTCTGGTGTTATCTaGAGTCACCTTGGTCTTGAGACTTTGAGGCAGACCAGCATAGGA +
Preference number: 2 (lower is better)
Translates to: SGWEGFGDHAWSGVI*SHLGLETLRQTSIG
Trigger: TCCTATGCTGGTCTGCCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATCACCAAAACCTTCCCATCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCGCACAGCTGAGTTCTTaGTGTAGCTTGGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFAQLSS*CSLAKP
Trigger: TGGCTTTGCCAAGCTACATCAAGAACTCAGCTGTGC...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTGCTGGCCCCACTTCCTaGGCAGACGTTGGCTGGATT +
Preference number: 2 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLAGPTS*ADVGWI
Trigger: AATCCAGCCAACGTCTGCTCAGGAAGTGGGGCCAGC...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCCAAGCTCTCCTTTTCTaGGATAGTGCCAATCTGGAG +
Preference number: 2 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFQALLF*DSANLE
Trigger: CTCCAGATTGGCACTATCTCAGAAAAGGAGAGCTTG...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR GCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATGTCCCTGGAAAAGTATaGCTTTCCCTACTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYVPGKV*LSLLSF
Trigger: GAAACTGAGTAGGGAAAGGCATACTTTTCCAGGGAC...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CAA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTaGTGTGAAACACTGGCCATGTTAATTCCAAACGGCCTCACCCGG +
Preference number: 2 (lower is better)
Translates to: IKKAVIVMVKIGNPI*CETLAMLIPNGLTR
Trigger: CCGGGTGAGGCCGTTTGGAATTAACATGGCCAGTGTTTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTCCCTGGACTAACTCGTaGGCCTGGACAAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSPWTNS*AWTRGK
Trigger: TTTTCCTCTTGTCCAGGCTCACGAGTTAGTCCAGGG...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAAGGGGAAGGGCCAAGCTaGGAAAAGCAGGTGCTGAAA +
Preference number: 2 (lower is better)
Translates to: IKKAVIVMVKIGNPILCEGEGPS*EKQVLK
Trigger: TTTCAGCACCTGCTTTTCTCAGCTTGGCCCTTCCCC...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR GCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGGAGGCACATCCCTCTTaGAACCAGGAAGTGTTAAAA +
Preference number: 2 (lower is better)
Translates to: DHAWSGVILSHLGLETLREAHPS*NQEVLK
Trigger: TTTTAACACTTCCTGGTTGCAAGAGGGATGTGCCTC...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAGAGATAGTGCCAATCTaGAGGGGCTTCCTTGGAAAC +
Preference number: 2 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLEIVPI*RGFLGN
Trigger: GTTTCCAAGGAAGCCCCTCCAGATTGGCACTATCTC...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCCAGTCAAACTGCAATaGCCTTCCTGGGAAACAAAT +
Preference number: 2 (lower is better)
Translates to: DHAWSGVILSHLGLETLRPVKLQ*PSWETN
Trigger: ATTTGTTTCCCAGGAAGGCCATTGCAGTTTGACTGG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCGAGAAAAGCAGGTGCTaGAAATTTATTCCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPEKSRC*KFIPEN
Trigger: GTTTTCTGGAATAAATTTTCAGCACCTGCTTTTCTC...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR GCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAGTCCACAGATCAGACTaGAGATCTCGGTTTCATCCA +
Preference number: 2 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLVHRSD*RSRFHP
Trigger: TGGATGAAACCGAGATCTGCAGTCTGATCTGTGGAC...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAATCCCCCTAAGTCCCTaGAAAAGTATGCCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLIPLSP*KSMPFP
Trigger: AGGGAAAGGCATACTTTTCCAGGGACTTAGGGGGAT...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTACAATGGCCAAAGGAATaGATGTCTGACGAGGTTCAA +
Preference number: 2 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLQWPKE*MSDEVQ
Trigger: TTGAACCTCGTCAGACATTCATTCCTTTGGCCATTG...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTATGGGAAGGTTTTGGTaGTCATGCGTGGTCTGGTGT +
Preference number: 2 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLMGRFW*SCVVWC
Trigger: ACACCAGACCACGCATGATCACCAAAACCTTCCCAT...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTACTGGAGGGGCTTCCTTaGAAACTATCCAATCAAATG +
Preference number: 2 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLLEGLP*KLSNQM
Trigger: CATTTGATTGGATAGTTTCCAAGGAAGCCCCTCCAG...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTATCCCCCTAAGTCCCTaGAAAAGTATGCCTTTCCCT +
Preference number: 2 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSIPLSP*KSMPFP
Trigger: AGGGAAAGGCATACTTTTCCAGGGACTTAGGGGGAT...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGAAAAACGGCCACTGCTaGGGATTCAGTCAATGGGGA +
Preference number: 2 (lower is better)
Translates to: VALELLKKLTLKYRIIKWKNGHC*GFSQWG
Trigger: TCCCCATTGACTGAATCCTCAGCAGTGGCCGTTTTT...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCGAGAAAAGCAGGTGCTaGAAATTTATTCCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFEKSRC*KFIPEN
Trigger: GTTTTCTGGAATAAATTTTCAGCACCTGCTTTTCTC...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGGCACAGCTGAGTTCTTaGTGTAGCTTGGCAAAGCCA +
Preference number: 2 (lower is better)
Translates to: VALELLKKLTLKYRIIKWAQLSS*CSLAKP
Trigger: TGGCTTTGCCAAGCTACATCAAGAACTCAGCTGTGC...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR GCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGAGGCACATCCCTCTTaGAACCAGGAAGTGTTAAAA +
Preference number: 2 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSEAHPS*NQEVLK
Trigger: TTTTAACACTTCCTGGTTGCAAGAGGGATGTGCCTC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGAACCCAATCTTGTGTaGAACACTGGCCATGTTAAT +
Preference number: 2 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSEPNLV*NTGHVN
Trigger: ATTAACATGGCCAGTGTTTCACACAAGATTGGGTTC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR GCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTGTCCCTGGAAAAGTATaGCTTTCCCTACTCAGTTTC +
Preference number: 2 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLVPGKV*LSLLSF
Trigger: GAAACTGAGTAGGGAAAGGCATACTTTTCCAGGGAC...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR TCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGGAACCCAATCTTGTGTaGAACACTGGCCATGTTAAT +
Preference number: 2 (lower is better)
Translates to: VALELLKKLTLKYRIIKWEPNLV*NTGHVN
Trigger: ATTAACATGGCCAGTGTTTCACACAAGATTGGGTTC...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR GCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTCATAAAATGTCACGCTaGCCACACCACATTACTAAT +
Preference number: 2 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLHKMSR*PHHITN
Trigger: ATTAGTAATGTGGTGTGGGCAGCGTGACATTTTATG...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CAA 90 bp CAAAGGAATGAATGTCTGACGAGGTTCAAACTAGTCAAATTAGCTTaGATAATCTGGATACAGTTTACAATTTCATCTCTGTATCCCTCA +
Preference number: 2 (lower is better)
Translates to: QRNECLTRFKLVKLA*IIWIQFTISSLYPS
Trigger: TGAGGGATACAGAGATGAAATTGTAAACTGTATCCAGATTATCAAAGCTAATTTGACTAGTTTGAACCTCGTCAGACATTCATTCCTTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR TCA 72 bp AAAACTATGGGTCCCAGTGGAGCTGGCCCCACTTCCTaGGCAGACGTTGGCTGGATTAGAAAGACAGCAGAA +
Preference number: 3 (lower is better)
Translates to: KTMGPSGAGPTS*ADVGWIRKTAE
Trigger: TTCTGCTGTCTTTCTAATCCAGCCAACGTCTGCTCAGGAAGTGGGGCCAGCTCCACTGGGACCCATAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CCA 72 bp ACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTaGCAACCTAACTTAGAAGCCCCGTGTGGCCCCTTT +
Preference number: 3 (lower is better)
Translates to: TQRQITHHGQQH*QPNLEAPCGPF
Trigger: AAAGGGGCCACACGGGGCTTCTAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR TCA 72 bp CTCGTGAGCCTGGACAAGAGGAAAAACGGCCACTGCTaGGGATTCAGTCAATGGGGAATGATGCAAATGATG +
Preference number: 3 (lower is better)
Translates to: LVSLDKRKNGHC*GFSQWGMMQMM
Trigger: CATCATTTGCATCATTCCCCATTGACTGAATCCTCAGCAGTGGCCGTTTTTCCTCTTGTCCAGGCTCACGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CCA 72 bp CCTGTCCCATTTCCAAAGCCTATCCCCCTAAGTCCCTaGAAAAGTATGCCTTTCCCTACTCAGTTTCAGACG +
Preference number: 3 (lower is better)
Translates to: PVPFPKPIPLSP*KSMPFPTQFQT
Trigger: CGTCTGAAACTGAGTAGGGAAAGGCATACTTTTCCAGGGACTTAGGGGGATAGGCTTTGGAAATGGGACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CAA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGCACGGCAGGCAGCTTaGATTGGAGAAGCAGCTTGC +
Preference number: 3 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSARQAA*IGEAAC
Trigger: GCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR GCA 72 bp AAAAGATATGCCAGCAGAGAAGTCCACAGATCAGACTaGAGATCTCGGTTTCATCCATGGCAATGGCCAAAG +
Preference number: 3 (lower is better)
Translates to: KRYASREVHRSD*RSRFHPWQWPK
Trigger: CTTTGGCCATTGCCATGGATGAAACCGAGATCTGCAGTCTGATCTGTGGACTTCTCTGCTGGCATATCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CCA 72 bp AGAGAATCAGGATGGGAAGGTTTTGGTGATCATGCGTaGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAG +
Preference number: 3 (lower is better)
Translates to: RESGWEGFGDHA*SGVILSHLGLE
Trigger: CTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATCACCAAAACCTTCCCATCCTGATTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR TCA 72 bp GATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTaGAACACTGGCCATGTTAATTCCAAACGGCCTCAC +
Preference number: 3 (lower is better)
Translates to: DSDGQDWEPNLV*NTGHVNSKRPH
Trigger: GTGAGGCCGTTTGGAATTAACATGGCCAGTGTTTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR TCA 72 bp TGGTTGATAACACAGTGTCCCTACAGAGAGGTCATCTaGAACTCAGAGGCAAATAACTCATCATGGGCAGCA +
Preference number: 3 (lower is better)
Translates to: WLITQCPYREVI*NSEANNSSWAA
Trigger: TGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTCAGATGACCTCTCTGTAGGGACACTGTGTTATCAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CAA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTCTTCCTGAGCAGACGTaGGCTGGATTAGAAAGACAG +
Preference number: 3 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLLPEQT*AGLERQ
Trigger: CTGTCTTTCTAATCCAGCCAACGTCTGCTCAGGAAG...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CAA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTCTTGGTCTTGAGACTTaGAGGCAGACCAGCATAGGA +
Preference number: 3 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLLGLET*RQTSIG
Trigger: TCCTATGCTGGTCTGCCTCAAAGTCTCAAGACCAAG...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CAA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATAAATACTTGGGAGGCTaGTGGTTCTTTCTTCTTAAT +
Preference number: 3 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYKYLGG*WFFLLN
Trigger: ATTAAGAAGAAAGAACCACAAGCCTCCCAAGTATTT...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR TCA 72 bp AGATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATaGATGTCTGACGAGGTTCAAACTAGTCAAATTAGC +
Preference number: 3 (lower is better)
Translates to: RSRFHPWQWPKE*MSDEVQTSQIS
Trigger: GCTAATTTGACTAGTTTGAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CAA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGATTGGGAACCCAATCTaGTGTGAAACACTGGCCATG +
Preference number: 3 (lower is better)
Translates to: VALELLKKLTLKYRIIKWIGNPI*CETLAM
Trigger: CATGGCCAGTGTTTCACACAAGATTGGGTTCCCAAT...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR GCA 72 bp AGACTAACTCTTAGAACCAATCTGGTCCTAATGAAATaGCTGAGACCAACAGATCAGTCTCCAAAAGGAATC +
Preference number: 3 (lower is better)
Translates to: RLTLRTNLVLMK*LRPTDQSPKGI
Trigger: GATTCCTTTTGGAGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGTTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CCA 72 bp TTTCATCTCTGTATCCCTCAGCCAGTCAAACTGCAATaGCCTTCCTGGGAAACAAATAAATATACTCTGCTT +
Preference number: 3 (lower is better)
Translates to: FHLCIPQPVKLQ*PSWETNKYTLL
Trigger: AAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCCATTGCAGTTTGACTGGCTGAGGGATACAGAGATGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR-3UTR CAA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGTCTGGAGGGGCTTCCTaGGAAACTATCCAATCAAAT +
Preference number: 3 (lower is better)
Translates to: VALELLKKLTLKYRIIKWSGGAS*ETIQSN
Trigger: ATTTGATTGGATAGTTTCCAAGGAAGCCCCTCCAGA...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR GCA 72 bp AATAGGCTAGAGACCATCTATCTGCCAAATGGAATCTaGTCTGGATATAAGATAAGGTACAAAGATCTGAAT +
Preference number: 3 (lower is better)
Translates to: NRLETIYLPNGI*SGYKIRYKDLN
Trigger: ATTCAGATCTTTGTACCTTATCTTATATCCAGAGCAGATTCCATTTGGCAGATAGATGGTCTCTAGCCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR GCA 72 bp GTATATATAGAGTTTAGAACCTGTCCACATATAATTTaGTGGTGTTGCCTATTTTCCTTCCGTAATTTTCCT +
Preference number: 3 (lower is better)
Translates to: VYIEFRTCPHII*WCCLFSFRNFP
Trigger: AGGAAAATTACGGAAGGAAAATAGGCAACACCAGCAAATTATATGTGGACAGGTTCTAAACTCTATATATAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATTTCATGGCCGACGCCTaGGGCACCTTCCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYFMADA*GTFPAA
Trigger: CGCCGCCGGGAAGGTGCCTCAGGCGTCGGCCATGAA...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGGCAGCCCATCGGCACTaGGCCCCCAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLAAHRH*APRAPR
Trigger: TCTGGGTGCTCTGGGGGCCCAGTGCCGATGGGCTGC...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCGCGGCTGACACAACCTaGACCGACATCACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPAADTT*TDITAS
Trigger: GGAGGCGGTGATGTCGGTGCAGGTTGTGTCAGCCGC...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGGTGCTCAGTCCTAGTTaGGACTCCGCCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLVLSPS*DSASEG
Trigger: CCCCTCCGAGGCGGAGTCGCAACTAGGACTGAGCAC...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCATCACCGCCTCCGCTaGAACCACCGGCTCAGACTC +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRHHRLR*NHRLRL
Trigger: GAGTCTGAGCCGGTGGTTGCAGCGGAGGCGGTGATG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325006.7
CDS-3UTR CCA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTACACAATGGAGCCCATaGCTTTCAGGGCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSTQWSP*LSGQHS
Trigger: GCTGTGCTGCCCTGAAAGCCATGGGCTCCATTGTGT...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTACGCCCACGGCGGCCGTaGTCAGTCCTAGTTGCGACT +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLRPRRP*SVLVAT
Trigger: AGTCGCAACTAGGACTGAGCACGGCCGCCGTGGGCG...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCAGCAGGCGGCCCTCTaGCAGCAGTACTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLQQAAL*QQYYPL
Trigger: AAGAGGATAGTACTGCTGGCAGAGGGCCGCCTGCTG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCCACCTCAGGCACCTTaGCGGCAGCCGCGGCTGACA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWPPQAP*RQPRLT
Trigger: TGTCAGCCGCGGCTGCCGCCAAGGTGCCTGAGGTGG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGCAGCCCATCGGCACTaGGCCCCCAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSAAHRH*APRAPR
Trigger: TCTGGGTGCTCTGGGGGCCCAGTGCCGATGGGCTGC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGCAGCCCATCGGCACTaGGCCCCCAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWAAHRH*APRAPR
Trigger: TCTGGGTGCTCTGGGGGCCCAGTGCCGATGGGCTGC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCTCCCAGGTCAGTTCTaGTGTCCGCAGACTCGCCAC +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRLPGQF*CPQTRH
Trigger: GTGGCGAGTCTGCGGACACCAGAACTGACCTGGGAG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGGCGGCAGCCGCGGCTaGCACAACCTGCACCGACAT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSGGSRG*HNLHRH
Trigger: ATGTCGGTGCAGGTTGTGTCAGCCGCGGCTGCCGCC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTGGCGGCAGCCGCGGCTaGCACAACCTGCACCGACAT +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLGGSRG*HNLHRH
Trigger: ATGTCGGTGCAGGTTGTGTCAGCCGCGGCTGCCGCC...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTTCATGGCCGACGCCTaGGGCACCTTCCCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVFMADA*GTFPAA
Trigger: CGCCGCCGGGAAGGTGCCTCAGGCGTCGGCCATGAA...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAGTGCTCAGTCCTAGTTaGGACTCCGCCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLVLSPS*DSASEG
Trigger: CCCCTCCGAGGCGGAGTCGCAACTAGGACTGAGCAC...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCCATCCATACAGGCTTaGAGGGCACAGATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLPSIQA*RAQMGS
Trigger: TGACCCCATCTGTGCCCTGCAAGCCTGTATGGATGG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTCTCAGCCAGTCAAACTaGAATGGCCTTCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSLSQSN*NGLPGK
Trigger: TTTCCCAGGAAGGCCATTGCAGTTTGACTGGCTGAG...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCTGGGGTTATCTGAGTaGCCCAAAGCAGACCCAACC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLGLSE*PKADPT
Trigger: GGTTGGGTCTGCTTTGGGGCACTCAGATAACCCCAG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAACCACCTCAGGCACCTTaGCGGCAGCCGCGGCTGACA +
Preference number: 4 (lower is better)
Translates to: IKKAVIVMVKIGNPILCEPPQAP*RQPRLT
Trigger: TGTCAGCCGCGGCTGCCGCCAAGGTGCCTGAGGTGG...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGCAGCCCATCGGCACTaGGCCCCCAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSAAHRH*APRAPR
Trigger: TCTGGGTGCTCTGGGGGCCCAGTGCCGATGGGCTGC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGACACAATGGAGCCCATaGCTTTCAGGGCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLTQWSP*LSGQHS
Trigger: GCTGTGCTGCCCTGAAAGCCATGGGCTCCATTGTGT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAGGGTCCCAGTGGAGCTaGCCCCACTTCCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLGSQWS*PHFLSR
Trigger: TCTGCTCAGGAAGTGGGGCCAGCTCCACTGGGACCC...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTATAAGCACAGCAGTCTaGGCAGTGATGTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSISTAV*AVMCVQ
Trigger: TTGCACACACATCACTGCTCAGACTGCTGTGCTTAT...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAGGGCCCATTCTTGTTaGGTCCCAGATACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLRAHSC*VPDTWP
Trigger: AGGCCAAGTATCTGGGACTCAACAAGAATGGGCCCT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCCCTGGACTAACTCGTaGGCCTGGACAAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLPWTNS*AWTRGK
Trigger: TTTTCCTCTTGTCCAGGCTCACGAGTTAGTCCAGGG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTACAAACTGGATCTTCTTaGCTGTGCGCGGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLQTGSS*LCAAPR
Trigger: CCGAGGCGCCGCGCACAGTCAAGAAGATCCAGTTTG...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446544.6
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAATACTGGGGTTATCTaGGTGCCCCAAAGCAGACCC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLNTGVI*VPQSRP
Trigger: GGGTCTGCTTTGGGGCACTCAGATAACCCCAGTATT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR GCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGCGGCTGACACAACCTaGACCGACATCACCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSAADTT*TDITAS
Trigger: GGAGGCGGTGATGTCGGTGCAGGTTGTGTCAGCCGC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTGGTCGCTCCGCTTCATaGCCGACGCCTGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAGRSAS*PTPEAP
Trigger: AGGTGCCTCAGGCGTCGGCCATGAAGCGGAGCGACC...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTGGTCGCTCCGCTTCATaGCCGACGCCTGAGGCACCT +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCGRSAS*PTPEAP
Trigger: AGGTGCCTCAGGCGTCGGCCATGAAGCGGAGCGACC...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGGCAGCCCATCGGCACTaGGCCCCCAGAGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWAAHRH*APRAPR
Trigger: TCTGGGTGCTCTGGGGGCCCAGTGCCGATGGGCTGC...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCACACAATGGAGCCCATaGCTTTCAGGGCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFTQWSP*LSGQHS
Trigger: GCTGTGCTGCCCTGAAAGCCATGGGCTCCATTGTGT...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCGGAGCCGTGCTCATATaGGCAAGTAGGATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFGAVLI*ASRIGR
Trigger: CCTCCCTATCCTACTTGCCCATATGAGCACGGCTCC...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGTGCCGCTGGTGCTGGTaGTGTGGGTCGCTCCGCTTC +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWCRWCW*CGSLRF
Trigger: GAAGCGGAGCGACCCACATCACCAGCACCAGCGGCA...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTACTGGATCTGCTTCTTaGCTGTGCGCGGCGCCTCGG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKATGSAS*LCAAPR
Trigger: CCGAGGCGCCGCGCACAGTCAAGAAGCAGATCCAGT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325006.7
CDS-3UTR TCA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTGTAGCTGTCAGTAGATaGCTGAGAAATGGAACGAGA +
Preference number: 4 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSVAVSR*LRNGTR
Trigger: TCTCGTTCCATTTCTCAGTCATCTACTGACAGCTAC...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAGTTGGTACAGCCTGTaGACTCCAGTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLSWYSL*TPVTLS
Trigger: GGAGAGTGTTACTGGAGTTCACAGGCTGTACCAACT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATAAAAACGGCCACTGCTaGGGATTCAGTCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYKNGHC*GFSQWG
Trigger: TCCCCATTGACTGAATCCTCAGCAGTGGCCGTTTTT...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGGAGTCACCTTGGTCTTaGGACTTTGAGGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRESPWS*DFEADQ
Trigger: CTGGTCTGCCTCAAAGTCTCAAGACCAAGGTGACTC...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCCCTTAGAGTTCTTTTaGTGCTTGTCCCTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLPLEFF*CLSLGD
Trigger: ATCGCCCAGGGACAAGCAGCAAAAGAACTCTAAGGG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCATTACCAGCCCCACTaGCACCTCTGTGGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWHYQPH*HLCGPG
Trigger: CCCTGGACCACAGAGGTGGCAGTGGGGCTGGTAATG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTTTGCTGCTTGTCCCTaGGCGATGTCTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLFAACP*AMSHHQ
Trigger: CTGATGATGAGACATCGCCCAGGGACAAGCAGCAAA...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCATCCAAGATCATGTTTaGCTGCCAGCCCTCCACATT +
Preference number: 4 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPIQDHV*LPALHI
Trigger: AATGTGGAGGGCTGGCAGCCAAACATGATCTTGGAT...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTGGGTCCCAGTGGAGCTaGCCCCACTTCCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLGSQWS*PHFLSR
Trigger: TCTGCTCAGGAAGTGGGGCCAGCTCCACTGGGACCC...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAAGGAAGTAAAACTATaGGTCCCAGTGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLKEVKL*VPVELA
Trigger: GGCCAGCTCCACTGGGACCCATAGTTTTACTTCCTT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTCCAGTCAAACTGCAATaGCCTTCCTGGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSPVKLQ*PSWETN
Trigger: ATTTGTTTCCCAGGAAGGCCATTGCAGTTTGACTGG...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCATGGGCAGCAACACTaGCAACCTAACTTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLHGQQH*QPNLEA
Trigger: GGCTTCTAAGTTAGGTTGCCAGTGTTGCTGCCCATG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTACTTTGCAGGAGTATGTaGCCATGGGGAGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLLCRSM*PWGAVL
Trigger: GAGCACGGCTCCCCATGGCCACATACTCCTGCAAAG...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCAGTTGGTACAGCCTGTaGACTCCAGTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFSWYSL*TPVTLS
Trigger: GGAGAGTGTTACTGGAGTTCACAGGCTGTACCAACT...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGATCAAGGCAAGAGCCTaGGTAGTAGCAGTGATTGAG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLIKARA*VVAVIE
Trigger: CTCAATCACTGCTACTACTCAGGCTCTTGCCTTGAT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTGCTGGCCCCACTTCCTaGGCAGACGTTGGCTGGATT +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCAGPTS*ADVGWI
Trigger: AATCCAGCCAACGTCTGCTCAGGAAGTGGGGCCAGC...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCAAGCTCTCCTTTTCTaGGATAGTGCCAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLQALLF*DSANLE
Trigger: CTCCAGATTGGCACTATCTCAGAAAAGGAGAGCTTG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCATGGGAAGGTTTTGGTaGTCATGCGTGGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFMGRFW*SCVVWC
Trigger: ACACCAGACCACGCATGATCACCAAAACCTTCCCAT...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATTTAGAGTTCTTTTGCTaGTTGTCCCTGGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYLEFFC*LSLGDV
Trigger: GACATCGCCCAGGGACAAGCAGCAAAAGAACTCTAA...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTTAGAGTTCTTTTGCTaGTTGTCCCTGGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLEFFC*LSLGDV
Trigger: GACATCGCCCAGGGACAAGCAGCAAAAGAACTCTAA...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAAGATCATGTTTGGCTaGCAGCCCTCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLKIMFG*QPSTFT
Trigger: TGTGAATGTGGAGGGCTGGCAGCCAAACATGATCTT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCCTCAGCCAGTCAAACTaGAATGGCCTTCCTGGGAAA +
Preference number: 4 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFLSQSN*NGLPGK
Trigger: TTTCCCAGGAAGGCCATTGCAGTTTGACTGGCTGAG...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGGTCCACAGATCAGACTaGAGATCTCGGTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLVHRSD*RSRFHP
Trigger: TGGATGAAACCGAGATCTGCAGTCTGATCTGTGGAC...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCTGGTGCTGGTGATGTaGGTCGCTCCGCTTCATGGC +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSLVLVM*VAPLHG
Trigger: GCCATGAAGCGGAGCGACCCACATCACCAGCACCAG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTGCAACCCACGATTTTaGCTCCAGCCAAAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLCNPRF*LQPKAF
Trigger: AAAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCA...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGATCCAAGATCATGTTTaGCTGCCAGCCCTCCACATT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLIQDHV*LPALHI
Trigger: AATGTGGAGGGCTGGCAGCCAAACATGATCTTGGAT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCAGTTACATACACAATaGAGCCCATGGCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLQLHTQ*SPWLSG
Trigger: CCCTGAAAGCCATGGGCTCCATTGTGTATGTAACTG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCCTTGCAGGGCACAGATaGGGTCAATTTCAGTTACAT +
Preference number: 4 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPLAGHR*GQFQLH
Trigger: ATGTAACTGAAATTGACCCCATCTGTGCCCTGCAAG...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCGGTCCAAGTGCTCTCTaGTTACCACATTCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPGPSAL*LPHSCY
Trigger: GTAACAAGAATGTGGTAACCAGAGAGCACTTGGACC...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAACTCCCAGGTCAGTTCTaGTGTCCGCAGACTCGCCAC +
Preference number: 4 (lower is better)
Translates to: IKKAVIVMVKIGNPILCELPGQF*CPQTRH
Trigger: GTGGCGAGTCTGCGGACACCAGAACTGACCTGGGAG...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCTCCCAGGTCAGTTCTaGTGTCCGCAGACTCGCCAC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSLPGQF*CPQTRH
Trigger: GTGGCGAGTCTGCGGACACCAGAACTGACCTGGGAG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTAACTATGGGTCCCAGTaGAGCTGGCCCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSNYGSQ*SWPHFL
Trigger: CAGGAAGTGGGGCCAGCTCCACTGGGACCCATAGTT...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGAAGGAAGTAAAACTATaGGTCCCAGTGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRKEVKL*VPVELA
Trigger: GGCCAGCTCCACTGGGACCCATAGTTTTACTTCCTT...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCGAGATAGTGCCAATCTaGAGGGGCTTCCTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFEIVPI*RGFLGN
Trigger: GTTTCCAAGGAAGCCCCTCCAGATTGGCACTATCTC...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCCACTGCCACCTCTGTaGTCCAGGGACCCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWPLPPL*SRDPCD
Trigger: ATCACAAGGGTCCCTGGACCACAGAGGTGGCAGTGG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490911.5
3UTR CAA 72 bp GAAGGTTTTGGTGATCATGCGTGGTCTGGTGTTATCTaGAGTCACCTTGGTCTTGAGACTTTGAGGCAGACC +
Preference number: 4 (lower is better)
Translates to: EGFGDHAWSGVI*SHLGLETLRQT
Trigger: GGTCTGCCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATCACCAAAACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGGTAGCTGTCAGTAGATaGCTGAGAAATGGAACGAGA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLVAVSR*LRNGTR
Trigger: TCTCGTTCCATTTCTCAGTCATCTACTGACAGCTAC...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCAGCAGTCTGAGCAGTaGTGTGTGTGCAACCCACGA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWQQSEQ*CVCNPR
Trigger: TCGTGGGTTGCACACACATCACTGCTCAGACTGCTG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAGTAGTAGCAGTGATTaGGAGCACAAATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLSSSSD*EHKCRH
Trigger: GTGCCTACATTTGTGCTCTCAATCACTGCTACTACT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAAGGGCCCATTCTTGTTaGGTCCCAGATACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLRAHSC*VPDTWP
Trigger: AGGCCAAGTATCTGGGACTCAACAAGAATGGGCCCT...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCAATGGCCAAAGGAATaGATGTCTGACGAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLQWPKE*MSDEVQ
Trigger: TTGAACCTCGTCAGACATTCATTCCTTTGGCCATTG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGATAACCAGTACTTGCTaGGACATATGGCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLITSTC*DIWPLK
Trigger: CTTCAGAGGCCATATGTCTCAGCAAGTACTGGTTAT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATCCTCAAAGCCATCAATaGAGGCATTTCTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYPQSHQ*RHFLFS
Trigger: GCTGAACAAGAAATGCCTGCATTGATGGCTTTGAGG...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGAAGATCATGTTTGGCTaGCAGCCCTCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRKIMFG*QPSTFT
Trigger: TGTGAATGTGGAGGGCTGGCAGCCAAACATGATCTT...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATTTCATACGGTCCAAGTaGTCTCTGGTTACCACATTC +
Preference number: 4 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYFIRSK*SLVTTF
Trigger: GAATGTGGTAACCAGAGAGCACTTGGACCGTATGAA...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGGCAGTACTATCCTCTTaGCATCAGGCCATATCACAT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLAVLSS*HQAISH
Trigger: ATGTGATATGGCCTGATGGCAAGAGGATAGTACTGC...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCAGCAGGCGGCCCTCTaGCAGCAGTACTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSQQAAL*QQYYPL
Trigger: AAGAGGATAGTACTGCTGGCAGAGGGCCGCCTGCTG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTCAGCAGGCGGCCCTCTaGCAGCAGTACTATCCTCTT +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLQQAAL*QQYYPL
Trigger: AAGAGGATAGTACTGCTGGCAGAGGGCCGCCTGCTG...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTGCACCCAGGCACTGTaGTTCTCACAGGGCACTCAC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSCTQAL*FSQGTH
Trigger: GTGAGTGCCCTGTGAGAAGCACAGTGCCTGGGTGCA...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR GCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGAGCTGATGCAAAGTaGTGCACCCAGGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWRADAK*CTQALC
Trigger: GCACAGTGCCTGGGTGCAGCACTTTGCATCAGCTCT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCTTGCAGGGCACAGATaGGGTCAATTTCAGTTACAT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLAGHR*GQFQLH
Trigger: ATGTAACTGAAATTGACCCCATCTGTGCCCTGCAAG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGGGTCCAAGTGCTCTCTaGTTACCACATTCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLGPSAL*LPHSCY
Trigger: GTAACAAGAATGTGGTAACCAGAGAGCACTTGGACC...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGACTCATCCATCTTCTTaGGCAACAGGTAGACATCCT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLTHPSS*ATGRHP
Trigger: AGGATGTCTACCTGTTGCCCAAGAAGATGGATGAGT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGATCCCCCTAAGTCCCTaGAAAAGTATGCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRIPLSP*KSMPFP
Trigger: AGGGAAAGGCATACTTTTCCAGGGACTTAGGGGGAT...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTAGGAGTATGTGGCCATaGGGAGCCGTGCTCATATGG +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSRSMWP*GAVLIW
Trigger: CCATATGAGCACGGCTCCCCATGGCCACATACTCCT...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCTTTGCAGGAGTATGTaGCCATGGGGAGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSLCRSM*PWGAVL
Trigger: GAGCACGGCTCCCCATGGCCACATACTCCTGCAAAG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGCCAGCTTTTTGGGCTaGGGAGTGGGGGACTACTCT +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSASFLG*GVGDYS
Trigger: AGAGTAGTCCCCCACTCCCCAGCCCAAAAAGCTGGC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCTGTCAGTAGATGACTaGGAAATGGAACGAGACAAA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLSVDD*EMERDK
Trigger: TTTGTCTCGTTCCATTTCTCAGTCATCTACTGACAG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCAGCAGTCTGAGCAGTaGTGTGTGTGCAACCCACGA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAQQSEQ*CVCNPR
Trigger: TCGTGGGTTGCACACACATCACTGCTCAGACTGCTG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAAGTCCATCAAGAATTaGTTCACGGCAACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLKSIKN*FTATVE
Trigger: CTCTACTGTTGCCGTGAATCAATTCTTGATGGACTT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTGTCCACTTGTCGGATaGCCTCATTTAATTTCACCA +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLCPLVG*PHLISP
Trigger: TGGTGAAATTAAATGAGGTCATCCGACAAGTGGACA...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAATCACATGGTCAACTTaGGATCTCACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLITWST*DLTRSQ
Trigger: CTGGGAGCGAGTGAGATCTCAAGTTGACCATGTGAT...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGAGTAGTAGCAGTGATTaGGAGCACAAATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRSSSSD*EHKCRH
Trigger: GTGCCTACATTTGTGCTCTCAATCACTGCTACTACT...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTGAGAAAAGCAGGTGCTaGAAATTTATTCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSEKSRC*KFIPEN
Trigger: GTTTTCTGGAATAAATTTTCAGCACCTGCTTTTCTC...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGGGGAAGGGCCAAGCTaGGAAAAGCAGGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSGEGPS*EKQVLK
Trigger: TTTCAGCACCTGCTTTTCTCAGCTTGGCCCTTCCCC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTGGGGAAGGGCCAAGCTaGGAAAAGCAGGTGCTGAAA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAGEGPS*EKQVLK
Trigger: TTTCAGCACCTGCTTTTCTCAGCTTGGCCCTTCCCC...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATTACAGAGAGGTCATCTaGAACTCAGAGGCAAATAAC +
Preference number: 4 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYYREVI*NSEANN
Trigger: GTTATTTGCCTCTGAGTTTCAGATGACCTCTCTGTA...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCGTTTGTTGAATTCTTaGTTCTGGTCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLRLLNS*FWSANW
Trigger: CCAGTTTGCTGACCAGAAGCAAGAATTCAACAAACG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGAGTGGAATAGATGTTaGAGGCAGCCCATCGGCACT +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWEWNRC*RQPIGT
Trigger: AGTGCCGATGGGCTGCCTGCAACATCTATTCCACTC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCCATCCATACAGGCTTaGAGGGCACAGATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSPSIQA*RAQMGS
Trigger: TGACCCCATCTGTGCCCTGCAAGCCTGTATGGATGG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTCCATCCATACAGGCTTaGAGGGCACAGATGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCPSIQA*RAQMGS
Trigger: TGACCCCATCTGTGCCCTGCAAGCCTGTATGGATGG...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCGTCCCTGGAAAAGTATaGCTTTCCCTACTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFVPGKV*LSLLSF
Trigger: GAAACTGAGTAGGGAAAGGCATACTTTTCCAGGGAC...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCCATAAAATGTCACGCTaGCCACACCACATTACTAAT +
Preference number: 4 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPHKMSR*PHHITN
Trigger: ATTAGTAATGTGGTGTGGGCAGCGTGACATTTTATG...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGGGCCATGGGGAGCCGTaGTCATATGGGCAAGTAGGA +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWGHGEP*SYGQVG
Trigger: TCCTACTTGCCCATATGAGCACGGCTCCCCATGGCC...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGCTGATGCAAAGTGCTaGACCCAGGCACTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSADAKC*TQALCF
Trigger: GAAGCACAGTGCCTGGGTGCAGCACTTTGCATCAGC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGTTCTGGTCAGCAAACTaGATCTGCTTCTTGACTGTG +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRFWSAN*ICFLTV
Trigger: CACAGTCAAGAAGCAGATCCAGTTTGCTGACCAGAA...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325006.7
CDS-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTATTTGCTGCTTGTCCCTaGGCGATGTCTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLFAACP*AMSHHQ
Trigger: CTGATGATGAGACATCGCCCAGGGACAAGCAGCAAA...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTACACAATGGAGCCCATaGCTTTCAGGGCAGCACAGC +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSTQWSP*LSGQHS
Trigger: GCTGTGCTGCCCTGAAAGCCATGGGCTCCATTGTGT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGCAGTAACCACACTCTaGGCCAACACTACAGGCACA +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSAVTTL*ANTTGT
Trigger: TGTGCCTGTAGTGTTGGCCCAGAGTGTGGTTACTGC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGAACTATGGGTCCCAGTaGAGCTGGCCCCACTTCCTG +
Preference number: 4 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVNYGSQ*SWPHFL
Trigger: CAGGAAGTGGGGCCAGCTCCACTGGGACCCATAGTT...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATTTTGGTGATCATGCGTaGTCTGGTGTTATCTTGAGT +
Preference number: 4 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYFGDHA*SGVILS
Trigger: ACTCAAGATAACACCAGACCACGCATGATCACCAAA...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGGAGCCGTGCTCATATaGGCAAGTAGGATAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSGAVLI*ASRIGR
Trigger: CCTCCCTATCCTACTTGCCCATATGAGCACGGCTCC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAGGAGTATGTGGCCATaGGGAGCCGTGCTCATATGG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKARSMWP*GAVLIW
Trigger: CCATATGAGCACGGCTCCCCATGGCCACATACTCCT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCTGACAACCCCTTACTaGCCGGCTTCAAAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWLTTPY*PASKPS
Trigger: AGAAGGCTTTGAAGCCGGCCAGTAAGGGGTTGTCAG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR TCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGAAGTCCATCAAGAATTaGTTCACGGCAACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRKSIKN*FTATVE
Trigger: CTCTACTGTTGCCGTGAATCAATTCTTGATGGACTT...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGATCACATGGTCAACTTaGGATCTCACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWITWST*DLTRSQ
Trigger: CTGGGAGCGAGTGAGATCTCAAGTTGACCATGTGAT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTAGGGCCCATTCTTGTTaGGTCCCAGATACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLRAHSC*VPDTWP
Trigger: AGGCCAAGTATCTGGGACTCAACAAGAATGGGCCCT...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAGGGCCCATTCTTGTTaGGTCCCAGATACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKARAHSC*VPDTWP
Trigger: AGGCCAAGTATCTGGGACTCAACAAGAATGGGCCCT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTAGGGCCCATTCTTGTTaGGTCCCAGATACTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSRAHSC*VPDTWP
Trigger: AGGCCAAGTATCTGGGACTCAACAAGAATGGGCCCT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCCCTGGACTAACTCGTaGGCCTGGACAAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAPWTNS*AWTRGK
Trigger: TTTTCCTCTTGTCCAGGCTCACGAGTTAGTCCAGGG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGCACAGCTGAGTTCTTaGTGTAGCTTGGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSAQLSS*CSLAKP
Trigger: TGGCTTTGCCAAGCTACATCAAGAACTCAGCTGTGC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGAGTCACCTTGGTCTTaGGACTTTGAGGCAGACCAG +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSESPWS*DFEADQ
Trigger: CTGGTCTGCCTCAAAGTCTCAAGACCAAGGTGACTC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAGGCATGTGAAAAGCTaGGGTGCCCTCATTACCGTC +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKARHVKS*GALITV
Trigger: GACGGTAATGAGGGCACCTCAGCTTTTCACATGCCT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTATCCACTCAGGCATGTaGAAAGCTGAGGTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSIHSGM*KAEVPS
Trigger: TGAGGGCACCTCAGCTTTTCACATGCCTGAGTGGAT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR GCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCGTTTGTTGAATTCTTaGTTCTGGTCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRRLLNS*FWSANW
Trigger: CCAGTTTGCTGACCAGAAGCAAGAATTCAACAAACG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGAGTGGAATAGATGTTaGAGGCAGCCCATCGGCACT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSEWNRC*RQPIGT
Trigger: AGTGCCGATGGGCTGCCTGCAACATCTATTCCACTC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCCATGTTACAAACGATaGAGCTATTCTTCATACGGT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLPCYKR*SYSSYG
Trigger: ACCGTATGAAGAATAGCTGCATCGTTTGTAACATGG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCATAAAATGTCACGCTaGCCACACCACATTACTAAT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLHKMSR*PHHITN
Trigger: ATTAGTAATGTGGTGTGGGCAGCGTGACATTTTATG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCTGCCAAATGGAATCTaGTCTGGATATAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLPNGI*SGYKIR
Trigger: CCTTATCTTATATCCAGAGCAGATTCCATTTGGCAG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCTGTCCACATATAATTTaGTGGTGTTGCCTATTTTCC +
Preference number: 4 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPCPHII*WCCLFS
Trigger: GGAAAATAGGCAACACCAGCAAATTATATGTGGACA...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGTGGCTAGCAGAAGCTaGATCCCTTTTCACAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSVASRS*IPFHSS
Trigger: GCTGCTGTGAAAAGGGATGCAGCTTCTGCTAGCCAC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTACAGTTACATACACAATaGAGCCCATGGCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLQLHTQ*SPWLSG
Trigger: CCCTGAAAGCCATGGGCTCCATTGTGTATGTAACTG...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGCAGTAACCACACTCTaGGCCAACACTACAGGCACA +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSAVTTL*ANTTGT
Trigger: TGTGCCTGTAGTGTTGGCCCAGAGTGTGGTTACTGC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAAGAACTGTAGTCTATaGGCTGAGCCTGTATACTAT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLKNCSL*AEPVYY
Trigger: ATAGTATACAGGCTCAGCCCATAGACTACAGTTCTT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTCATGGGCAGCAACACTaGCAACCTAACTTAGAAGCC +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSHGQQH*QPNLEA
Trigger: GGCTTCTAAGTTAGGTTGCCAGTGTTGCTGCCCATG...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
3UTR CAA 72 bp GCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTaGTGTGAAACACTGGCCATGTTAATTCCAAACGGC +
Preference number: 4 (lower is better)
Translates to: AVIVMVKIGNPI*CETLAMLIPNG
Trigger: GCCGTTTGGAATTAACATGGCCAGTGTTTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGATAAGCACAGCAGTCTaGGCAGTGATGTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWISTAV*AVMCVQ
Trigger: TTGCACACACATCACTGCTCAGACTGCTGTGCTTAT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCAGCAGCCACTTCATTaGGAGTGGAATAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWQQPLH*EWNRCC
Trigger: GCAACATCTATTCCACTCTCAATGAAGTGGCTGCTG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTAGTTGGTACAGCCTGTaGACTCCAGTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCSWYSL*TPVTLS
Trigger: GGAGAGTGTTACTGGAGTTCACAGGCTGTACCAACT...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTAGTTGGTACAGCCTGTaGACTCCAGTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSSWYSL*TPVTLS
Trigger: GGAGAGTGTTACTGGAGTTCACAGGCTGTACCAACT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTAGTTGGTACAGCCTGTaGACTCCAGTAACACTCTCC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSSWYSL*TPVTLS
Trigger: GGAGAGTGTTACTGGAGTTCACAGGCTGTACCAACT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTATCACATGGTCAACTTaGGATCTCACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAITWST*DLTRSQ
Trigger: CTGGGAGCGAGTGAGATCTCAAGTTGACCATGTGAT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTATCACATGGTCAACTTaGGATCTCACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSITWST*DLTRSQ
Trigger: CTGGGAGCGAGTGAGATCTCAAGTTGACCATGTGAT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTATCACATGGTCAACTTaGGATCTCACTCGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSITWST*DLTRSQ
Trigger: CTGGGAGCGAGTGAGATCTCAAGTTGACCATGTGAT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGCACAGCTGAGTTCTTaGTGTAGCTTGGCAAAGCCA +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSAQLSS*CSLAKP
Trigger: TGGCTTTGCCAAGCTACATCAAGAACTCAGCTGTGC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGAGACATATGGCCTCTaGAGAACTGTAGTCTATGGG +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWETYGL*RTVVYG
Trigger: CCCATAGACTACAGTTCTTCAGAGGCCATATGTCTC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCCCTTAGAGTTCTTTTaGTGCTTGTCCCTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAPLEFF*CLSLGD
Trigger: ATCGCCCAGGGACAAGCAGCAAAAGAACTCTAAGGG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTCCCTTAGAGTTCTTTTaGTGCTTGTCCCTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCPLEFF*CLSLGD
Trigger: ATCGCCCAGGGACAAGCAGCAAAAGAACTCTAAGGG...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAAGATCATGTTTGGCTaGCAGCCCTCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWKIMFG*QPSTFT
Trigger: TGTGAATGTGGAGGGCTGGCAGCCAAACATGATCTT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAGCAGTACTATCCTCTTaGCATCAGGCCATATCACAT +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLAVLSS*HQAISH
Trigger: ATGTGATATGGCCTGATGGCAAGAGGATAGTACTGC...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTTGTGAAAAGCTGAGGTaGCCTCATTACCGTCCCACT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSCEKLR*PHYRPT
Trigger: AGTGGGACGGTAATGAGGGCACCTCAGCTTTTCACA...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTTTGCTGCTTGTCCCTaGGCGATGTCTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAFAACP*AMSHHQ
Trigger: CTGATGATGAGACATCGCCCAGGGACAAGCAGCAAA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTGCAACCCACGATTTTaGCTCCAGCCAAAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWCNPRF*LQPKAF
Trigger: AAAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTACTTGCAGGGCACAGATaGGGTCAATTTCAGTTACAT +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLLAGHR*GQFQLH
Trigger: ATGTAACTGAAATTGACCCCATCTGTGCCCTGCAAG...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTTGAATTCTTGCTTCTaGTCAGCAAACTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLNSCF*SANWIF
Trigger: AAAGATCCAGTTTGCTGACCAGAAGCAAGAATTCAA...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466924.1
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCATCAGCAATTCTGTTaGCTCTGGTTCCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSHQQFC*LWFQPA
Trigger: AGCTGGCTGGAACCAGAGCCAACAGAATTGCTGATG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS-3UTR CCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTTCTGGTCAGCAAACTaGATCTGGGCCTTAATCCCA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWFWSAN*IWALIP
Trigger: TGGGATTAAGGCCCAGATCCAGTTTGCTGACCAGAA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS-3UTR TCA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAATGGTGGGACGTTTGTTaGATTCTTGCTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: IKKAVIVMVKIGNPILCEWWDVC*ILASGQ
Trigger: CTGACCAGAAGCAAGAATTCAACAAACGTCCCACCA...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTGGGACGTTTGTTaGATTCTTGCTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAWWDVC*ILASGQ
Trigger: CTGACCAGAAGCAAGAATTCAACAAACGTCCCACCA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTGGTGGGACGTTTGTTaGATTCTTGCTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSWWDVC*ILASGQ
Trigger: CTGACCAGAAGCAAGAATTCAACAAACGTCCCACCA...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGTAGCTGTCAGTAGATaGCTGAGAAATGGAACGAGA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWVAVSR*LRNGTR
Trigger: TCTCGTTCCATTTCTCAGTCATCTACTGACAGCTAC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAAAAAGGCTTTTCTCCTTaGGCTCTCTTCCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: IKKAVIVMVKIGNPILCEKGFSP*ALFLKA
Trigger: GGCTTTGAGGAAGAGAGCTCAAGGAGAAAAGCCTTT...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAAAGGCTTTTCTCCTTaGGCTCTCTTCCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAKGFSP*ALFLKA
Trigger: GGCTTTGAGGAAGAGAGCTCAAGGAGAAAAGCCTTT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTAAAGGCTTTTCTCCTTaGGCTCTCTTCCTCAAAGCC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSKGFSP*ALFLKA
Trigger: GGCTTTGAGGAAGAGAGCTCAAGGAGAAAAGCCTTT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTATAAGCACAGCAGTCTaGGCAGTGATGTGTGTGCAA +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSISTAV*AVMCVQ
Trigger: TTGCACACACATCACTGCTCAGACTGCTGTGCTTAT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTCAGCAGCCACTTCATTaGGAGTGGAATAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCQQPLH*EWNRCC
Trigger: GCAACATCTATTCCACTCTCAATGAAGTGGCTGCTG...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCAGCAGCCACTTCATTaGGAGTGGAATAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSQQPLH*EWNRCC
Trigger: GCAACATCTATTCCACTCTCAATGAAGTGGCTGCTG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCAGCAGCCACTTCATTaGGAGTGGAATAGATGTTGC +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSQQPLH*EWNRCC
Trigger: GCAACATCTATTCCACTCTCAATGAAGTGGCTGCTG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTATCAAGGCAAGAGCCTaGGTAGTAGCAGTGATTGAG +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLIKARA*VVAVIE
Trigger: CTCAATCACTGCTACTACTCAGGCTCTTGCCTTGAT...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTATCAAGGCAAGAGCCTaGGTAGTAGCAGTGATTGAG +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSIKARA*VVAVIE
Trigger: CTCAATCACTGCTACTACTCAGGCTCTTGCCTTGAT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGAAAAACGGCCACTGCTaGGGATTCAGTCAATGGGGA +
Preference number: 4 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVKNGHC*GFSQWG
Trigger: TCCCCATTGACTGAATCCTCAGCAGTGGCCGTTTTT...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCAAGCTCTCCTTTTCTaGGATAGTGCCAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAQALLF*DSANLE
Trigger: CTCCAGATTGGCACTATCTCAGAAAAGGAGAGCTTG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTGGTCTGGTGTTATCTTaGGTCACCTTGGTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAGLVLS*VTLVLR
Trigger: TCTCAAGACCAAGGTGACTCAAGATAACACCAGACC...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGATGGGAAGGTTTTGGTaGTCATGCGTGGTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWMGRFW*SCVVWC
Trigger: ACACCAGACCACGCATGATCACCAAAACCTTCCCAT...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGAGACATATGGCCTCTaGAGAACTGTAGTCTATGGG +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSETYGL*RTVVYG
Trigger: CCCATAGACTACAGTTCTTCAGAGGCCATATGTCTC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTACAGTACACCAGAATaGAAGCAGGAACTGACGGCT +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAYSTPE*KQELTA
Trigger: AGCCGTCAGTTCCTGCTTTCATTCTGGTGTACTGTA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466924.1
CDS-3UTR GCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTACGTTTGTTGAATTCTTaGTTCTGGTCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLRLLNS*FWSANW
Trigger: CCAGTTTGCTGACCAGAAGCAAGAATTCAACAAACG...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTTTAGAGTTCTTTTGCTaGTTGTCCCTGGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSLEFFC*LSLGDV
Trigger: GACATCGCCCAGGGACAAGCAGCAAAAGAACTCTAA...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTTAGAGTTCTTTTGCTaGTTGTCCCTGGGCGATGTC +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKALEFFC*LSLGDV
Trigger: GACATCGCCCAGGGACAAGCAGCAAAAGAACTCTAA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCCTCAAAGCCATCAATaGAGGCATTTCTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWPQSHQ*RHFLFS
Trigger: GCTGAACAAGAAATGCCTGCATTGATGGCTTTGAGG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTAAGATCATGTTTGGCTaGCAGCCCTCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCKIMFG*QPSTFT
Trigger: TGTGAATGTGGAGGGCTGGCAGCCAAACATGATCTT...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAAGATCATGTTTGGCTaGCAGCCCTCCACATTCACA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAKIMFG*QPSTFT
Trigger: TGTGAATGTGGAGGGCTGGCAGCCAAACATGATCTT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTTCATACGGTCCAAGTaGTCTCTGGTTACCACATTC +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWFIRSK*SLVTTF
Trigger: GAATGTGGTAACCAGAGAGCACTTGGACCGTATGAA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAGAGCATTAGTCAACTaGCTGACAACCCCTTACTGG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKARALVN*LTTPYW
Trigger: CCAGTAAGGGGTTGTCAGGCAGTTGACTAATGCTCT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGTTTGCTGCTTGTCCCTaGGCGATGTCTCATCATCAG +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWFAACP*AMSHHQ
Trigger: CTGATGATGAGACATCGCCCAGGGACAAGCAGCAAA...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTTGCAACCCACGATTTTaGCTCCAGCCAAAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLCNPRF*LQPKAF
Trigger: AAAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCA...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTGCAACCCACGATTTTaGCTCCAGCCAAAGGCTTTT +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSCNPRF*LQPKAF
Trigger: AAAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCA...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTATCCAAGATCATGTTTaGCTGCCAGCCCTCCACATT +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSIQDHV*LPALHI
Trigger: AATGTGGAGGGCTGGCAGCCAAACATGATCTTGGAT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTATCCAAGATCATGTTTaGCTGCCAGCCCTCCACATT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSIQDHV*LPALHI
Trigger: AATGTGGAGGGCTGGCAGCCAAACATGATCTTGGAT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTCAGTTACATACACAATaGAGCCCATGGCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLQLHTQ*SPWLSG
Trigger: CCCTGAAAGCCATGGGCTCCATTGTGTATGTAACTG...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCAGTTACATACACAATaGAGCCCATGGCTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAQLHTQ*SPWLSG
Trigger: CCCTGAAAGCCATGGGCTCCATTGTGTATGTAACTG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTATCCCCCTAAGTCCCTaGAAAAGTATGCCTTTCCCT +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAIPLSP*KSMPFP
Trigger: AGGGAAAGGCATACTTTTCCAGGGACTTAGGGGGAT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCCACATATAATTTGCTaGTGTTGCCTATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DHAWSGVILSHLGLETLRPHIIC*CCLFSF
Trigger: GAAGGAAAATAGGCAACACCAGCAAATTATATGTGG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTTTCTGGTCAGCAAACTaGATCTTCTTGACTGTGCGC +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLFWSAN*IFLTVR
Trigger: GCGCACAGTCAAGAAGATCCAGTTTGCTGACCAGAA...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCTGGTTTGGAAATACTaGGGTTATCTGAGTGCCCCA +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSLVWKY*GYLSAP
Trigger: TGGGGCACTCAGATAACCCCAGTATTTCCAAACCAG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTCCATAGTGCAGGCTTaGGTAAGATATGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWSIVQA*VRYVLK
Trigger: CTTCAGGACATATCTTACCCAAGCCTGCACTATGGA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTCAGCAAACTGGATCTaGGCCTTAATCCCAGAGTTG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKASANWI*ALIPEL
Trigger: CAACTCTGGGATTAAGGCCCAGATCCAGTTTGCTGA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490911.5
3UTR CAA 72 bp CCTACTTCCGAAAGTAAGGTCACTTTCAGACTAGCTTaGAGAGTATATGTGAAGACCAGGAGAAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PTSESKVTFRLA*RVYVKTRRSWR
Trigger: TCTCCAACTTCTCCTGGTCTTCACATATACTCTCAAAGCTAGTCTGAAAGTGACCTTACTTTCGGAAGTAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGGTGGGACGTTTGTTaGATTCTTGCTTCTGGTCAG +
Preference number: 4 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVWWDVC*ILASGQ
Trigger: CTGACCAGAAGCAAGAATTCAACAAACGTCCCACCA...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCTGTCAGTAGATGACTaGGAAATGGAACGAGACAAA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWLSVDD*EMERDK
Trigger: TTTGTCTCGTTCCATTTCTCAGTCATCTACTGACAG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGTAGCTGTCAGTAGATaGCTGAGAAATGGAACGAGA +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSVAVSR*LRNGTR
Trigger: TCTCGTTCCATTTCTCAGTCATCTACTGACAGCTAC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTGTAGCTGTCAGTAGATaGCTGAGAAATGGAACGAGA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAVAVSR*LRNGTR
Trigger: TCTCGTTCCATTTCTCAGTCATCTACTGACAGCTAC...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAAGTCCATCAAGAATTaGTTCACGGCAACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWKSIKN*FTATVE
Trigger: CTCTACTGTTGCCGTGAATCAATTCTTGATGGACTT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTAGTAGTAGCAGTGATTaGGAGCACAAATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSSSSSD*EHKCRH
Trigger: GTGCCTACATTTGTGCTCTCAATCACTGCTACTACT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTAGTAGTAGCAGTGATTaGGAGCACAAATGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSSSSSD*EHKCRH
Trigger: GTGCCTACATTTGTGCTCTCAATCACTGCTACTACT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCAATGGCCAAAGGAATaGATGTCTGACGAGGTTCAA +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSQWPKE*MSDEVQ
Trigger: TTGAACCTCGTCAGACATTCATTCCTTTGGCCATTG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGGGTCTGGTGTTATCTTaGGTCACCTTGGTCTTGAGA +
Preference number: 4 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVGLVLS*VTLVLR
Trigger: TCTCAAGACCAAGGTGACTCAAGATAACACCAGACC...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTATAACCAGTACTTGCTaGGACATATGGCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCITSTC*DIWPLK
Trigger: CTTCAGAGGCCATATGTCTCAGCAAGTACTGGTTAT...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTAGAGCAAGGCTTTGCTaGGAAACAGCAGGTTATGAT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSRARLC*ETAGYD
Trigger: ATCATAACCTGCTGTTTCTCAGCAAAGCCTTGCTCT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAGAGCAAGGCTTTGCTaGGAAACAGCAGGTTATGAT +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKARARLC*ETAGYD
Trigger: ATCATAACCTGCTGTTTCTCAGCAAAGCCTTGCTCT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTACAGAGAGGTCATCTaGAACTCAGAGGCAAATAAC +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWYREVI*NSEANN
Trigger: GTTATTTGCCTCTGAGTTTCAGATGACCTCTCTGTA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTTTCAAAATCAGAGCTaGTGCAAAGTGCTGCACCCA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAFQNQS*CKVLHP
Trigger: TGGGTGCAGCACTTTGCATCAGCTCTGATTTTGAAA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR GCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCCTCAAAGCCATCAATaGAGGCATTTCTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSPQSHQ*RHFLFS
Trigger: GCTGAACAAGAAATGCCTGCATTGATGGCTTTGAGG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCCTCAAAGCCATCAATaGAGGCATTTCTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAPQSHQ*RHFLFS
Trigger: GCTGAACAAGAAATGCCTGCATTGATGGCTTTGAGG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTTTCATACGGTCCAAGTaGTCTCTGGTTACCACATTC +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLFIRSK*SLVTTF
Trigger: GAATGTGGTAACCAGAGAGCACTTGGACCGTATGAA...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTTCATACGGTCCAAGTaGTCTCTGGTTACCACATTC +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAFIRSK*SLVTTF
Trigger: GAATGTGGTAACCAGAGAGCACTTGGACCGTATGAA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTTCATACGGTCCAAGTaGTCTCTGGTTACCACATTC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSFIRSK*SLVTTF
Trigger: GAATGTGGTAACCAGAGAGCACTTGGACCGTATGAA...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGCAGTACTATCCTCTTaGCATCAGGCCATATCACAT +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSAVLSS*HQAISH
Trigger: ATGTGATATGGCCTGATGGCAAGAGGATAGTACTGC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTGAGGCACATCCCTCTTaGAACCAGGAAGTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAEAHPS*NQEVLK
Trigger: TTTTAACACTTCCTGGTTGCAAGAGGGATGTGCCTC...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTGAGGCACATCCCTCTTaGAACCAGGAAGTGTTAAAA +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCEAHPS*NQEVLK
Trigger: TTTTAACACTTCCTGGTTGCAAGAGGGATGTGCCTC...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGGAAAGAAGACACATTaGTCTGATTCCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWGKKTH*SDSKGR
Trigger: TCTACCCTTGGAATCAGAGCAATGTGTCTTCTTTCC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTGGAAAGAAGACACATTaGTCTGATTCCAAGGGTAGA +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSGKKTH*SDSKGR
Trigger: TCTACCCTTGGAATCAGAGCAATGTGTCTTCTTTCC...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCTTGCAGGGCACAGATaGGGTCAATTTCAGTTACAT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSLAGHR*GQFQLH
Trigger: ATGTAACTGAAATTGACCCCATCTGTGCCCTGCAAG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGGTCCAAGTGCTCTCTaGTTACCACATTCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSGPSAL*LPHSCY
Trigger: GTAACAAGAATGTGGTAACCAGAGAGCACTTGGACC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTACTCATCCATCTTCTTaGGCAACAGGTAGACATCCT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSTHPSS*ATGRHP
Trigger: AGGATGTCTACCTGTTGCCCAAGAAGATGGATGAGT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTACTCATCCATCTTCTTaGGCAACAGGTAGACATCCT +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSTHPSS*ATGRHP
Trigger: AGGATGTCTACCTGTTGCCCAAGAAGATGGATGAGT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCTGGAGGGGCTTCCTTaGAAACTATCCAATCAAATG +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSLEGLP*KLSNQM
Trigger: CATTTGATTGGATAGTTTCCAAGGAAGCCCCTCCAG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCTGGAGGGGCTTCCTTaGAAACTATCCAATCAAATG +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSLEGLP*KLSNQM
Trigger: CATTTGATTGGATAGTTTCCAAGGAAGCCCCTCCAG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTCCAGTCAAACTGCAATaGCCTTCCTGGGAAACAAAT +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCPVKLQ*PSWETN
Trigger: ATTTGTTTCCCAGGAAGGCCATTGCAGTTTGACTGG...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCAAGGAATCCAATTTTTaGGTGGGACATAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFKESNF*VGHKMS
Trigger: TGACATTTTATGTCCCACCCAAAAATTGGATTCCTT...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCTGTCAGTAGATGACTaGGAAATGGAACGAGACAAA +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSLSVDD*EMERDK
Trigger: TTTGTCTCGTTCCATTTCTCAGTCATCTACTGACAG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAAGTCCATCAAGAATTaGTTCACGGCAACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAKSIKN*FTATVE
Trigger: CTCTACTGTTGCCGTGAATCAATTCTTGATGGACTT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTAAGTCCATCAAGAATTaGTTCACGGCAACAGTAGAG +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSKSIKN*FTATVE
Trigger: CTCTACTGTTGCCGTGAATCAATTCTTGATGGACTT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTTGTCCACTTGTCGGATaGCCTCATTTAATTTCACCA +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSCPLVG*PHLISP
Trigger: TGGTGAAATTAAATGAGGTCATCCGACAAGTGGACA...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGTCCACTTGTCGGATaGCCTCATTTAATTTCACCA +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKACPLVG*PHLISP
Trigger: TGGTGAAATTAAATGAGGTCATCCGACAAGTGGACA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR TCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGAACCCAATCTTGTGTaGAACACTGGCCATGTTAAT +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSEPNLV*NTGHVN
Trigger: ATTAACATGGCCAGTGTTTCACACAAGATTGGGTTC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTGAACCCAATCTTGTGTaGAACACTGGCCATGTTAAT +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCEPNLV*NTGHVN
Trigger: ATTAACATGGCCAGTGTTTCACACAAGATTGGGTTC...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCGTTTGTTGAATTCTTaGTTCTGGTCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSRLLNS*FWSANW
Trigger: CCAGTTTGCTGACCAGAAGCAAGAATTCAACAAACG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCGTTTGTTGAATTCTTaGTTCTGGTCAGCAAACTGG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKARLLNS*FWSANW
Trigger: CCAGTTTGCTGACCAGAAGCAAGAATTCAACAAACG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGCCTCAAAGCCATCAATaGAGGCATTTCTTGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWPQSHQ*RHFLFS
Trigger: GCTGAACAAGAAATGCCTGCATTGATGGCTTTGAGG...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCCATGTTACAAACGATaGAGCTATTCTTCATACGGT +
Preference number: 4 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWPCYKR*SYSSYG
Trigger: ACCGTATGAAGAATAGCTGCATCGTTTGTAACATGG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR GCA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGGCAGTACTATCCTCTTaGCATCAGGCCATATCACAT +
Preference number: 4 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVAVLSS*HQAISH
Trigger: ATGTGATATGGCCTGATGGCAAGAGGATAGTACTGC...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTCTGCCAAATGGAATCTaGTCTGGATATAAGATAAGG +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSLPNGI*SGYKIR
Trigger: CCTTATCTTATATCCAGAGCAGATTCCATTTGGCAG...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTTGAATTCTTGCTTCTaGTCAGCAAACTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSLNSCF*SANWIC
Trigger: GCAGATCCAGTTTGCTGACCAGAAGCAAGAATTCAA...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000325006.7
CDS-3UTR CCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGGGTCCAAGTGCTCTCTaGTTACCACATTCTTGTTAC +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWGPSAL*LPHSCY
Trigger: GTAACAAGAATGTGGTAACCAGAGAGCACTTGGACC...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTTTTGGTGATCATGCGTaGTCTGGTGTTATCTTGAGT +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLFGDHA*SGVILS
Trigger: ACTCAAGATAACACCAGACCACGCATGATCACCAAA...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTTACTTGGGAGGCTTGTaGTTCTTTCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSYLGGL*FFLLNG
Trigger: ACCATTAAGAAGAAAGAACCACAAGCCTCCCAAGTA...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTAAGGGAAAGCTGGTTTaGAAATACTGGGGTTATCTG +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSKGKLV*KYWGYL
Trigger: CAGATAACCCCAGTATTTCCAAACCAGCTTTCCCTT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTAGCAAAAGGGAAAGCTaGTTTGGAAATACTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSSKRES*FGNTGV
Trigger: AACCCCAGTATTTCCAAACCAGCTTTCCCTTTTGCT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTTGAATTCTTGCTTCTaGTCAGCAAACTGGATCTGG +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKALNSCF*SANWIW
Trigger: CCAGATCCAGTTTGCTGACCAGAAGCAAGAATTCAA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS-3UTR TCA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGCTGTCAGTAGATGACTaGGAAATGGAACGAGACAAA +
Preference number: 4 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVLSVDD*EMERDK
Trigger: TTTGTCTCGTTCCATTTCTCAGTCATCTACTGACAG...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR TCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGTGTCCACTTGTCGGATaGCCTCATTTAATTTCACCA +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWCPLVG*PHLISP
Trigger: TGGTGAAATTAAATGAGGTCATCCGACAAGTGGACA...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCCATGTTACAAACGATaGAGCTATTCTTCATACGGT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSPCYKR*SYSSYG
Trigger: ACCGTATGAAGAATAGCTGCATCGTTTGTAACATGG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CCA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAGCAGGTTATGATTTTTaGTCTAAGAATACAATAGGC +
Preference number: 4 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLAGYDF*SKNTIG
Trigger: GCCTATTGTATTCTTAGACCAAAAATCATAACCTGC...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTACTTGGGAGGCTTGTaGTTCTTTCTTCTTAATGGT +
Preference number: 4 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSYLGGL*FFLLNG
Trigger: ACCATTAAGAAGAAAGAACCACAAGCCTCCCAAGTA...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAATTGAATTCTTGCTTCTaGTCAGCAAACTGGATCTTC +
Preference number: 4 (lower is better)
Translates to: IKKAVIVMVKIGNPILCELNSCF*SANWIF
Trigger: GAAGATCCAGTTTGCTGACCAGAAGCAAGAATTCAA...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTTGAATTCTTGCTTCTaGTCAGCAAACTGGATCATC +
Preference number: 4 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKALNSCF*SANWII
Trigger: GATGATCCAGTTTGCTGACCAGAAGCAAGAATTCAA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR TCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTGAGAAAAGCAGGTGCTaGAAATTTATTCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCEKSRC*KFIPEN
Trigger: GTTTTCTGGAATAAATTTTCAGCACCTGCTTTTCTC...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGCCATGTTACAAACGATaGAGCTATTCTTCATACGGT +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWPCYKR*SYSSYG
Trigger: ACCGTATGAAGAATAGCTGCATCGTTTGTAACATGG...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTTGTCCACATATAATTTaGTGGTGTTGCCTATTTTCC +
Preference number: 4 (lower is better)
Translates to: GLPGKQINILCFVRVSSCCPHII*WCCLFS
Trigger: GGAAAATAGGCAACACCAGCAAATTATATGTGGACA...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTAAGGAATCCAATTTTTaGGTGGGACATAAAATGTCA +
Preference number: 4 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSKESNF*VGHKMS
Trigger: TGACATTTTATGTCCCACCCAAAAATTGGATTCCTT...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGAAGAACTGTAGTCTATaGGCTGAGCCTGTATACTAT +
Preference number: 4 (lower is better)
Translates to: VALELLKKLTLKYRIIKWKNCSL*AEPVYY
Trigger: ATAGTATACAGGCTCAGCCCATAGACTACAGTTCTT...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTCCACATATAATTTGCTaGTGTTGCCTATTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLPHIIC*CCLFSF
Trigger: GAAGGAAAATAGGCAACACCAGCAAATTATATGTGG...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTATAATTTGCTGGTGTTaGCTATTTTCCTTCCGTAAT +
Preference number: 4 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSIICWC*LFSFRN
Trigger: ATTACGGAAGGAAAATAGGCAACACCAGCAAATTAT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR GCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTATAATTTGCTGGTGTTaGCTATTTTCCTTCCGTAAT +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLIICWC*LFSFRN
Trigger: ATTACGGAAGGAAAATAGGCAACACCAGCAAATTAT...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CCA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTGCAGGTTATGATTTTTaGTCTAAGAATACAATAGGC +
Preference number: 4 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLAGYDF*SKNTIG
Trigger: GCCTATTGTATTCTTAGACCAAAAATCATAACCTGC...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS CCA 90 bp GACCAGGGCCTCGCCGCCGTCGCGGTGCCGCTGGTGCTGGTGATGTaGGTCGCTCCGCTTCATGGCCGACGCCTGAGGCACCTTCCCGGC +
Preference number: 5 (lower is better)
Translates to: DQGLAAVAVPLVLVM*VAPLHGRRLRHLPG
Trigger: GCCGGGAAGGTGCCTCAGGCGTCGGCCATGAAGCGGAGCGACCCACATCACCAGCACCAGCGGCACCGCGACGGCGGCGAGGCCCTGGTC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS TCA 90 bp CAGGTCCTTCAGCTCCACCTCAGGCACCTTGGCGGCAGCCGCGGCTaGCACAACCTGCACCGACATCACCGCCTCCGCTGCAACCACCGG +
Preference number: 5 (lower is better)
Translates to: QVLQLHLRHLGGSRG*HNLHRHHRLRCNHR
Trigger: CCGGTGGTTGCAGCGGAGGCGGTGATGTCGGTGCAGGTTGTGTCAGCCGCGGCTGCCGCCAAGGTGCCTGAGGTGGAGCTGAAGGACCTG
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS GCA 90 bp AGCTCCACCTCAGGCACCTTGGCGGCAGCCGCGGCTGACACAACCTaGACCGACATCACCGCCTCCGCTGCAACCACCGGCTCAGACTCC +
Preference number: 5 (lower is better)
Translates to: SSTSGTLAAAAADTT*TDITASAATTGSDS
Trigger: GGAGTCTGAGCCGGTGGTTGCAGCGGAGGCGGTGATGTCGGTGCAGGTTGTGTCAGCCGCGGCTGCCGCCAAGGTGCCTGAGGTGGAGCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325006.7
CDS-3UTR CAA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTAACTGGATCTGCTTCTaGACTGTGCGCGGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSNWICF*TVRGAS
Trigger: CGAGGCGCCGCGCACAGTCAAGAAGCAGATCCAGTT...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000325006.7
CDS CCA 90 bp TCATCAGCAATTCTGTTGGCTCTGGTTCCAGCCAGCTTTTTGGGCTaGGGAGTGGGGGACTACTCTTCCTTGGAATCCCTGAAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: SSAILLALVPASFLG*GVGDYSSLESLKQL
Trigger: GAGCTGCTTCAGGGATTCCAAGGAAGAGTAGTCCCCCACTCCCCAGCCCAAAAAGCTGGCTGGAACCAGAGCCAACAGAATTGCTGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS CCA 90 bp TTGCTGCCCAGCATAGTGACATTACCAGCCCCACTGCCACCTCTGTaGTCCAGGGACCCTTGTGATCAGGCCTTTAAACTTTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: LLPSIVTLPAPLPPL*SRDPCDQAFKLSSS
Trigger: TGATGAGGAAAGTTTAAAGGCCTGATCACAAGGGTCCCTGGACCACAGAGGTGGCAGTGGGGCTGGTAATGTCACTATGCTGGGCAGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS-3UTR CAA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTGTGCAACCCACGATTTaGGCTCCAGCCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSVQPTI*APAKGF
Trigger: AAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCAC...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTCCATCCATACAGGCTaGCAGGGCACAGATGGGGTC +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLSIHTG*QGTDGV
Trigger: GACCCCATCTGTGCCCTGCAAGCCTGTATGGATGGA...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGGCACGGCAGGCAGCTTaGATTGGAGAAGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLARQAA*IGEAAC
Trigger: GCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGC...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS TCA 90 bp CAAAAACAGGAAATCCACTTTCTGCTAGAGCAGCAGCCACTTCATTaGGAGTGGAATAGATGTTGCAGGCAGCCCATCGGCACTGGGCCC +
Preference number: 5 (lower is better)
Translates to: QKQEIHFLLEQQPLH*EWNRCCRQPIGTGP
Trigger: GGGCCCAGTGCCGATGGGCTGCCTGCAACATCTATTCCACTCTCAATGAAGTGGCTGCTGCTCTAGCAGAAAGTGGATTTCCTGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000466993.5
ENST00000474594.5
ENST00000490911.5
ENST00000491079.1
CDS TCA 90 bp CTTCTGGTCAGCAAACTGGATCATCCACTCAGGCATGTGAAAAGCTaGGGTGCCCTCATTACCGTCCCACTTCTCCATAGTGCAGGCTTG +
Preference number: 5 (lower is better)
Translates to: LLVSKLDHPLRHVKS*GALITVPLLHSAGL
Trigger: CAAGCCTGCACTATGGAGAAGTGGGACGGTAATGAGGGCACCTCAGCTTTTCACATGCCTGAGTGGATGATCCAGTTTGCTGACCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS CCA 90 bp TGCCCCAAAGCAGACCCAACCCTAGTGAGATTCAGAAGTTCACAGTaGCTAGCAGAAGCTGCATCCCTTTTCACAGCAGCCTCCGATTCA +
Preference number: 5 (lower is better)
Translates to: CPKADPTLVRFRSSQ*LAEAASLFTAASDS
Trigger: TGAATCGGAGGCTGCTGTGAAAAGGGATGCAGCTTCTGCTAGCCACTGTGAACTTCTGAATCTCACTAGGGTTGGGTCTGCTTTGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS-3UTR CAA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATCCCAGCTTTGGACAGTaGGTACAGCCTGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYPSFGQ*VQPVNS
Trigger: GGAGTTCACAGGCTGTACCAACTGTCCAAAGCTGGG...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCCCAGCTTTGGACAGTaGGTACAGCCTGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLPSFGQ*VQPVNS
Trigger: GGAGTTCACAGGCTGTACCAACTGTCCAAAGCTGGG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTCTTGGTCTTGAGACTTaGAGGCAGACCAGCATAGGA +
Preference number: 5 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSLGLET*RQTSIG
Trigger: TCCTATGCTGGTCTGCCTCAAAGTCTCAAGACCAAG...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTGAGCGACGTCCAATTTaGGTGGGACGTTTGTTGAAT +
Preference number: 5 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSERRPI*VGRLLN
Trigger: ATTCAACAAACGTCCCACCAAAATTGGACGTCGCTC...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGGTGCAACCCACGATTTaGGCTCCAGCCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLVQPTI*APAKGF
Trigger: AAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCAC...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCATCCAAGATCATGTTaGGCTGCCAGCCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLHPRSC*AASPPH
Trigger: ATGTGGAGGGCTGGCAGCCAAACATGATCTTGGATG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTATTGGGAACCCAATCTaGTGTGAAACACTGGCCATG +
Preference number: 5 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSIGNPI*CETLAM
Trigger: CATGGCCAGTGTTTCACACAAGATTGGGTTCCCAAT...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTTGGTCTGGTGTTATCTaGAGTCACCTTGGTCTTGAG +
Preference number: 5 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSWSGVI*SHLGLE
Trigger: CTCAAGACCAAGGTGACTCAAGATAACACCAGACCA...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCGAAGACCAGGAGAAGTaGGAGAGGGTAGAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPEDQEK*ERVEVE
Trigger: TTCTACCTCTACCCTCTCCAACTTCTCCTGGTCTTC...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS GCA 90 bp CCTTTTCACAGCAGCCTCCGATTCAAATCAAGAGCATTAGTCAACTaGCTGACAACCCCTTACTGGCCGGCTTCAAAGCCTTCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: PFHSSLRFKSRALVN*LTTPYWPASKPSVS
Trigger: AGACACAGAAGGCTTTGAAGCCGGCCAGTAAGGGGTTGTCAGGCAGTTGACTAATGCTCTTGATTTGAATCGGAGGCTGCTGTGAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS CCA 90 bp GCTGAGGTGCCCTCATTACCGTCCCACTTCTCCATAGTGCAGGCTTaGGTAAGATATGTCCTGAAGCAAAAGGGAAAGCTGGTTTGGAAA +
Preference number: 5 (lower is better)
Translates to: AEVPSLPSHFSIVQA*VRYVLKQKGKLVWK
Trigger: TTTCCAAACCAGCTTTCCCTTTTGCTTCAGGACATATCTTACCCAAGCCTGCACTATGGAGAAGTGGGACGGTAATGAGGGCACCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS-3UTR CAA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCATCCAAGATCATGTTaGGCTGCCAGCCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: DHAWSGVILSHLGLETLRHPRSC*AASPPH
Trigger: ATGTGGAGGGCTGGCAGCCAAACATGATCTTGGATG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCTTCCTGAGCAGACGTaGGCTGGATTAGAAAGACAG +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLPEQT*AGLERQ
Trigger: CTGTCTTTCTAATCCAGCCAACGTCTGCTCAGGAAG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTCCATCCATACAGGCTaGCAGGGCACAGATGGGGTC +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWSIHTG*QGTDGV
Trigger: GACCCCATCTGTGCCCTGCAAGCCTGTATGGATGGA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATCACATGGTCAACTaGAGATCTCACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLYHMVN*RSHSLP
Trigger: TGGGAGCGAGTGAGATCTCAAGTTGACCATGTGATA...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGAGCAGTACTATCCTCTaGCCATCAGGCCATATCACA +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLSSTIL*PSGHIT
Trigger: TGTGATATGGCCTGATGGCAAGAGGATAGTACTGCT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGCACGGCAGGCAGCTTaGATTGGAGAAGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWARQAA*IGEAAC
Trigger: GCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCTCCATAGTGCAGGCTaGGGTAAGATATGTCCTGAA +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLHSAG*GKICPE
Trigger: TTCAGGACATATCTTACCCAAGCCTGCACTATGGAG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS TCA 90 bp TGTGTGCAACCCACGATTTTGGCTCCAGCCAAAGGCTTTTCTCCTTaGGCTCTCTTCCTCAAAGCCATCAATGCAGGCATTTCTTGTTCA +
Preference number: 5 (lower is better)
Translates to: CVQPTILAPAKGFSP*ALFLKAINAGISCS
Trigger: TGAACAAGAAATGCCTGCATTGATGGCTTTGAGGAAGAGAGCTCAAGGAGAAAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000461161.5
ENST00000466924.1
ENST00000466993.5
ENST00000472554.5
ENST00000474594.5
ENST00000490911.5
ENST00000491079.1
CDS GCA 90 bp GATTTCAAAATCAGAGCTGATGCAAAGTGCTGCACCCAGGCACTGTaGTTCTCACAGGGCACTCACTGTTTTAATGCTACCCAAACACTC +
Preference number: 5 (lower is better)
Translates to: DFKIRADAKCCTQAL*FSQGTHCFNATQTL
Trigger: GAGTGTTTGGGTAGCATTAAAACAGTGAGTGCCCTGTGAGAAGCACAGTGCCTGGGTGCAGCACTTTGCATCAGCTCTGATTTTGAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS GCA 90 bp CCCAACCCTAGTGAGATTCAGAAGTTCACAGTGGCTAGCAGAAGCTaGATCCCTTTTCACAGCAGCCTCCGATTCAAATCAAGAGCATTA +
Preference number: 5 (lower is better)
Translates to: PNPSEIQKFTVASRS*IPFHSSLRFKSRAL
Trigger: TAATGCTCTTGATTTGAATCGGAGGCTGCTGTGAAAAGGGATGCAGCTTCTGCTAGCCACTGTGAACTTCTGAATCTCACTAGGGTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS GCA 90 bp GAAGCAAAAGGGAAAGCTGGTTTGGAAATACTGGGGTTATCTGAGTaGCCCAAAGCAGACCCAACCCTAGTGAGATTCAGAAGTTCACAG +
Preference number: 5 (lower is better)
Translates to: EAKGKAGLEILGLSE*PKADPTLVRFRSSQ
Trigger: CTGTGAACTTCTGAATCTCACTAGGGTTGGGTCTGCTTTGGGGCACTCAGATAACCCCAGTATTTCCAAACCAGCTTTCCCTTTTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS-3UTR CAA 90 bp GGGTATCAAGCTGTGAGTCTGAAAGACCTGTCCCATTTCCAAAGCCTATCCCCCACGTTTGTTGAATTCTaGCTTCTGGTCAGCAAACTG +
Preference number: 5 (lower is better)
Translates to: GYQAVSLKDLSHFQSLSPTFVEF*LLVSKL
Trigger: CAGTTTGCTGACCAGAAGCAAGAATTCAACAAACGT...GGGGGATAGGCTTTGGAAATGGGACAGGTCTTTCAGACTCACAGCTTGATACCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTTGGTGGGACGTTTGTaGAATTCTTGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLVGRL*NSCFWS
Trigger: TGACCAGAAGCAAGAATTCAACAAACGTCCCACCAA...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AAGCAGCATAAAAGCTTTGCAGGAGTATGTGGCCATGGGGAGCCGTGCTCATATTTGGTGACTGAGTCATaGACATTCATGGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: KQHKSFAGVCGHGEPCSYLVTES*TFMAGT
Trigger: TGTTCCAGCCATGAATGTCAATGACTCAGTCACCAA...ATATGAGCACGGCTCCCCATGGCCACATACTCCTGCAAAGCTTTTATGCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAATCCATCCATACAGGCTaGCAGGGCACAGATGGGGTC +
Preference number: 5 (lower is better)
Translates to: IKKAVIVMVKIGNPILCESIHTG*QGTDGV
Trigger: GACCCCATCTGTGCCCTGCAAGCCTGTATGGATGGA...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGCACGGCAGGCAGCTTaGATTGGAGAAGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSARQAA*IGEAAC
Trigger: GCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGCACGGCAGGCAGCTTaGATTGGAGAAGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSARQAA*IGEAAC
Trigger: GCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp ATTTCTTTCCTTCCTCAGCCCATCCTCTGTGGCTTTCATGGCCCTCAGGGCAGTACTTTCAGACTAGCTTaGAGAGTATATGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: ISFLPQPILCGFHGPQGSTFRLA*RVYVKT
Trigger: GGTCTTCACATATACTCTCAAAGCTAGTCTGAAAGT...ACTGCCCTGAGGGCCATGAAAGCCACAGAGGATGGGCTGAGGAAGGAAAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGGCAAACTGGATCTTCTaGACTGTGCGCGGCGCCTCG +
Preference number: 5 (lower is better)
Translates to: VALELLKKLTLKYRIIKWANWIF*TVRGAS
Trigger: CGAGGCGCCGCGCACAGTCAAGAAGATCCAGTTTGC...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGACGTTTGTTGAATTCTaGCTTCTGGTCAGCAAACTG +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLTFVEF*LLVSKL
Trigger: CAGTTTGCTGACCAGAAGCAAGAATTCAACAAACGT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCTTGGTGGGACGTTTGTaGAATTCTTGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFLVGRL*NSCFWS
Trigger: TGACCAGAAGCAAGAATTCAACAAACGTCCCACCAA...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGAGTTCTTTTGCTGCTaGTCCCTGGGCGATGTCTCA +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWEFFCC*SLGDVS
Trigger: TGAGACATCGCCCAGGGACAAGCAGCAAAAGAACTC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTCCCTTAGAGTTCTTTaGCTGCTTGTCCCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWSLRVL*LLVPGR
Trigger: TCGCCCAGGGACAAGCAGCAAAAGAACTCTAAGGGA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCCAAACTCTGCCTGTTaGATGTTCTTAACACAGAAG +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLPNSAC*MFLTQK
Trigger: CTTCTGTGTTAAGAACATCAAACAGGCAGAGTTTGG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGTGCAACCCACGATTTaGGCTCCAGCCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWVQPTI*APAKGF
Trigger: AAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCAC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTCCCAGCTTTGGACAGTaGGTACAGCCTGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: GLPGKQINILCFVRVSSCPSFGQ*VQPVNS
Trigger: GGAGTTCACAGGCTGTACCAACTGTCCAAAGCTGGG...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCCCAGCTTTGGACAGTaGGTACAGCCTGTGAACTCC +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAPSFGQ*VQPVNS
Trigger: GGAGTTCACAGGCTGTACCAACTGTCCAAAGCTGGG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGTTGGTGACTGAGTCATaGACATTCATGGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: DHAWSGVILSHLGLETLRLVTES*TFMAGT
Trigger: TGTTCCAGCCATGAATGTCAATGACTCAGTCACCAA...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGATAGAACCCAAATACTaGGGAGGCTTGTGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLIEPKY*GGLWFF
Trigger: AAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTAT...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGGGGACTACTCTTCCTaGGAATCCCTGAAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSGDYSS*ESLKQL
Trigger: GAGCTGCTTCAGGGATTCCAAGGAAGAGTAGTCCCC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS GCA 90 bp TCTGTATATGAAGCCGCTCTGTTAAGTACCTGCAGGCTATACACATaGCAGAAGAGGGAAGCTGAAAGAGATTGCCAAAGACATTCTTCC +
Preference number: 5 (lower is better)
Translates to: SVYEAALLSTCRLYT*QKREAERDCQRHSS
Trigger: GGAAGAATGTCTTTGGCAATCTCTTTCAGCTTCCCTCTTCTGGCATGTGTATAGCCTGCAGGTACTTAACAGAGCGGCTTCATATACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472554.5
CDS CCA 90 bp CGATTCAAATCAAGAGCATTAGTCAACTGCCTGACAACCCCTTACTaGCCGGCTTCAAAGCCTTCTGTGTCTGATTTCAAAATCAGAGCT +
Preference number: 5 (lower is better)
Translates to: RFKSRALVNCLTTPY*PASKPSVSDFKIRA
Trigger: AGCTCTGATTTTGAAATCAGACACAGAAGGCTTTGAAGCCGGCCAGTAAGGGGTTGTCAGGCAGTTGACTAATGCTCTTGATTTGAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS-3UTR CAA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAGAGCGACGTCCAATTTaGGTGGGACGTTTGTTGAAT +
Preference number: 5 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLERRPI*VGRLLN
Trigger: ATTCAACAAACGTCCCACCAAAATTGGACGTCGCTC...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTGAGTTCTTTTGCTGCTaGTCCCTGGGCGATGTCTCA +
Preference number: 5 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLEFFCC*SLGDVS
Trigger: TGAGACATCGCCCAGGGACAAGCAGCAAAAGAACTC...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGAGTTCTTTTGCTGCTaGTCCCTGGGCGATGTCTCA +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSEFFCC*SLGDVS
Trigger: TGAGACATCGCCCAGGGACAAGCAGCAAAAGAACTC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGAGTTCTTTTGCTGCTaGTCCCTGGGCGATGTCTCA +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSEFFCC*SLGDVS
Trigger: TGAGACATCGCCCAGGGACAAGCAGCAAAAGAACTC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCCCTTAGAGTTCTTTaGCTGCTTGTCCCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSSLRVL*LLVPGR
Trigger: TCGCCCAGGGACAAGCAGCAAAAGAACTCTAAGGGA...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTCCCTTAGAGTTCTTTaGCTGCTTGTCCCTGGGCGA +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKASLRVL*LLVPGR
Trigger: TCGCCCAGGGACAAGCAGCAAAAGAACTCTAAGGGA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCCAAACTCTGCCTGTTaGATGTTCTTAACACAGAAG +
Preference number: 5 (lower is better)
Translates to: DHAWSGVILSHLGLETLRPNSAC*MFLTQK
Trigger: CTTCTGTGTTAAGAACATCAAACAGGCAGAGTTTGG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGTGCAACCCACGATTTaGGCTCCAGCCAAAGGCTTT +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSVQPTI*APAKGF
Trigger: AAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCAC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCATCCAAGATCATGTTaGGCTGCCAGCCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSHPRSC*AASPPH
Trigger: ATGTGGAGGGCTGGCAGCCAAACATGATCTTGGATG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCATCCAAGATCATGTTaGGCTGCCAGCCCTCCACAT +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSHPRSC*AASPPH
Trigger: ATGTGGAGGGCTGGCAGCCAAACATGATCTTGGATG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCCAGAGAGCAAGGCTTaGCTGAGAAACAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWPESKA*LRNSRL
Trigger: TAACCTGCTGTTTCTCAGCAAAGCCTTGCTCTCTGG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCTGTCCACATATAATTaGCTGGTGTTGCCTATTTTC +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLLSTYN*LVLPIF
Trigger: GAAAATAGGCAACACCAGCAAATTATATGTGGACAG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTGAGCACGGCAGGCAGCTTTGATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGCAATGCAGGCATTTCTaGTTCAGCAATTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: VSTAGSFDWRSSLLNSFLQCRHF*FSNFNF
Trigger: GAAATTGAAATTGCTGAACAAGAAATGCCTGCATTG...CAAGAAAGAATTCAGCAAGCTGCTTCTCCAATCAAAGCTGCCTGCCGTGCTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATCTCGGTTTCATCCATGGCAATGGCCAAAGGAATGAATGTCTGACGAGGTTCCTGGTTACCACATTCTaGTTACCTGTACAGGTAATA +
Preference number: 5 (lower is better)
Translates to: DLGFIHGNGQRNECLTRFLVTTF*LPVQVI
Trigger: TATTACCTGTACAGGTAACAAGAATGTGGTAACCAG...GAACCTCGTCAGACATTCATTCCTTTGGCCATTGCCATGGATGAAACCGAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATCATGCGTGGTCTGGTGTTATCTTGAGTCACCTTGGTCTTGAGACTTTGAGGCTGGTTACCACATTCTaGTTACCTGTACAGGTAATA +
Preference number: 5 (lower is better)
Translates to: DHAWSGVILSHLGLETLRLVTTF*LPVQVI
Trigger: TATTACCTGTACAGGTAACAAGAATGTGGTAACCAG...CCTCAAAGTCTCAAGACCAAGGTGACTCAAGATAACACCAGACCACGCATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTATCACATGGTCAACTaGAGATCTCACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWYHMVN*RSHSLP
Trigger: TGGGAGCGAGTGAGATCTCAAGTTGACCATGTGATA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTGAAGACCAGGAGAAGTaGGAGAGGGTAGAGGTAGAA +
Preference number: 5 (lower is better)
Translates to: GLPGKQINILCFVRVSSCEDQEK*ERVEVE
Trigger: TTCTACCTCTACCCTCTCCAACTTCTCCTGGTCTTC...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCCAGAGAGCAAGGCTTaGCTGAGAAACAGCAGGTTA +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSPESKA*LRNSRL
Trigger: TAACCTGCTGTTTCTCAGCAAAGCCTTGCTCTCTGG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp ACTCTTAGAACCAATCTGGTCCTAATGAAATGCCTGAGACCAACAGATCAGTCTAGCAGCATAAAAGCTTaGCAGGAGTATGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: TLRTNLVLMKCLRPTDQSSSIKA*QEYVAM
Trigger: CATGGCCACATACTCCTGCAAAGCTTTTATGCTGCT...AGACTGATCTGTTGGTCTCAGGCATTTCATTAGGACCAGATTGGTTCTAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGCAGCATAAAAGCTTaGCAGGAGTATGTGGCCATG +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWSSIKA*QEYVAM
Trigger: CATGGCCACATACTCCTGCAAAGCTTTTATGCTGCT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS GCA 90 bp GTGCCTCAGAAGGTCTTCTCTTCAGAAACGTCTTCTAATAAATTTTaGAAGACCCAATCTTCCATAGCCTCTACCATTGCCAATGGCGAT +
Preference number: 5 (lower is better)
Translates to: VPQKVFSSETSSNKF*KTQSSIASTIANGD
Trigger: ATCGCCATTGGCAATGGTAGAGGCTATGGAAGATTGGGTCTTGCAAAATTTATTAGAAGACGTTTCTGAAGAGAAGACCTTCTGAGGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461161.5
CDS-3UTR CAA 90 bp GAAACTCAGAGGCAAATAACTCATCATGGGCAGCAACACTGGCAACCTAACTTAATTTTGGTGGGACGTTaGTTGAATTCTTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ETQRQITHHGQQHWQPNLILVGR*LNSCFW
Trigger: CCAGAAGCAAGAATTCAACAAACGTCCCACCAAAAT...TAAGTTAGGTTGCCAGTGTTGCTGCCCATGATGAGTTATTTGCCTCTGAGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGAGCGACGTCCAATTTaGGTGGGACGTTTGTTGAAT +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSERRPI*VGRLLN
Trigger: ATTCAACAAACGTCCCACCAAAATTGGACGTCGCTC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTGAGCGACGTCCAATTTaGGTGGGACGTTTGTTGAAT +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSERRPI*VGRLLN
Trigger: ATTCAACAAACGTCCCACCAAAATTGGACGTCGCTC...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTTGGTGACTGAGTCATaGACATTCATGGCTGGAACA +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWLVTES*TFMAGT
Trigger: TGTTCCAGCCATGAATGTCAATGACTCAGTCACCAA...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAATATCACATGGTCAACTaGAGATCTCACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: IKKAVIVMVKIGNPILCEYHMVN*RSHSLP
Trigger: TGGGAGCGAGTGAGATCTCAAGTTGACCATGTGATA...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTTATCACATGGTCAACTaGAGATCTCACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLYHMVN*RSHSLP
Trigger: TGGGAGCGAGTGAGATCTCAAGTTGACCATGTGATA...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTATCACATGGTCAACTaGAGATCTCACTCGCTCCCA +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAYHMVN*RSHSLP
Trigger: TGGGAGCGAGTGAGATCTCAAGTTGACCATGTGATA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTAGCAGTACTATCCTCTaGCCATCAGGCCATATCACA +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSSSTIL*PSGHIT
Trigger: TGTGATATGGCCTGATGGCAAGAGGATAGTACTGCT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTAGCAGTACTATCCTCTaGCCATCAGGCCATATCACA +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKASSTIL*PSGHIT
Trigger: TGTGATATGGCCTGATGGCAAGAGGATAGTACTGCT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTATTGGGAACCCAATCTaGTGTGAAACACTGGCCATG +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAIGNPI*CETLAM
Trigger: CATGGCCAGTGTTTCACACAAGATTGGGTTCCCAAT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GTAGCACTGGAGTTACTCAAGAAACTGACTCTGAAATACAGAATCATCAAATGGCTTCCTGAGCAGACGTaGGCTGGATTAGAAAGACAG +
Preference number: 5 (lower is better)
Translates to: VALELLKKLTLKYRIIKWLPEQT*AGLERQ
Trigger: CTGTCTTTCTAATCCAGCCAACGTCTGCTCAGGAAG...CCATTTGATGATTCTGTATTTCAGAGTCAGTTTCTTGAGTAACTCCAGTGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGTCTGGTGTTATCTaGAGTCACCTTGGTCTTGAG +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAWSGVI*SHLGLE
Trigger: CTCAAGACCAAGGTGACTCAAGATAACACCAGACCA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS TCA 90 bp GCTGAAAGAGATTGCCAAAGACATTCTTCCTGGATAGCCTTAACTTaGAATGTAGGGCTAACTTTATCTTCAGAACACGCAGAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: AERDCQRHSSWIALT*NVGLTLSSEHAEVH
Trigger: ATGGACCTCTGCGTGTTCTGAAGATAAAGTTAGCCCTACATTTCAAGTTAAGGCTATCCAGGAAGAATGTCTTTGGCAATCTCTTTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472554.5
CDS TCA 90 bp GCTGAAAGAGATTGCCAAAGACATTCTTCCTGGATAGCCTTAACTTaGAATGTAGGGCTAACTTTATCTTCAGAACACGCAGAGGTCCTT +
Preference number: 5 (lower is better)
Translates to: AERDCQRHSSWIALT*NVGLTLSSEHAEVL
Trigger: AAGGACCTCTGCGTGTTCTGAAGATAAAGTTAGCCCTACATTTCAAGTTAAGGCTATCCAGGAAGAATGTCTTTGGCAATCTCTTTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491079.1
CDS GCA 90 bp TGTCCCATGTTACAAACGATGCAGCTATTCTTCATACGGTCCAAGTaGTCTCTGGTTACCACATTCTTGTTACCTGTACAGGTAATAACA +
Preference number: 5 (lower is better)
Translates to: CPMLQTMQLFFIRSK*SLVTTFLLPVQVIT
Trigger: TGTTATTACCTGTACAGGTAACAAGAATGTGGTAACCAGAGAGCACTTGGACCGTATGAAGAATAGCTGCATCGTTTGTAACATGGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGACGTTTGTTGAATTCTaGCTTCTGGTCAGCAAACTG +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWTFVEF*LLVSKL
Trigger: CAGTTTGCTGACCAGAAGCAAGAATTCAACAAACGT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAATTGGTGGGACGTTTGTaGAATTCTTGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: IKKAVIVMVKIGNPILCELVGRL*NSCFWS
Trigger: TGACCAGAAGCAAGAATTCAACAAACGTCCCACCAA...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTTGGTGGGACGTTTGTaGAATTCTTGCTTCTGGTCA +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSLVGRL*NSCFWS
Trigger: TGACCAGAAGCAAGAATTCAACAAACGTCCCACCAA...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGATTTTGGTGGGACGTTaGTTGAATTCTTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWILVGR*LNSCFW
Trigger: CCAGAAGCAAGAATTCAACAAACGTCCCACCAAAAT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGAGCAGTACTATCCTCTaGCCATCAGGCCATATCACA +
Preference number: 5 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVSSTIL*PSGHIT
Trigger: TGTGATATGGCCTGATGGCAAGAGGATAGTACTGCT...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTCTGGAGGGGCTTCCTaGGAAACTATCCAATCAAAT +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKASGGAS*ETIQSN
Trigger: ATTTGATTGGATAGTTTCCAAGGAAGCCCCTCCAGA...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTTCTGGAGGGGCTTCCTaGGAAACTATCCAATCAAAT +
Preference number: 5 (lower is better)
Translates to: GLPGKQINILCFVRVSSCSGGAS*ETIQSN
Trigger: ATTTGATTGGATAGTTTCCAAGGAAGCCCCTCCAGA...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGGAATATAACCAGTACTaGCTGAGACATATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWEYNQY*LRHMAS
Trigger: AGAGGCCATATGTCTCAGCAAGTACTGGTTATATTC...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTACGTTTGTTGAATTCTaGCTTCTGGTCAGCAAACTG +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKATFVEF*LLVSKL
Trigger: CAGTTTGCTGACCAGAAGCAAGAATTCAACAAACGT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTATTTTGGTGGGACGTTaGTTGAATTCTTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAILVGR*LNSCFW
Trigger: CCAGAAGCAAGAATTCAACAAACGTCCCACCAAAAT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTATTTTGGTGGGACGTTaGTTGAATTCTTGCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSILVGR*LNSCFW
Trigger: CCAGAAGCAAGAATTCAACAAACGTCCCACCAAAAT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCCAAACTCTGCCTGTTaGATGTTCTTAACACAGAAG +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAPNSAC*MFLTQK
Trigger: CTTCTGTGTTAAGAACATCAAACAGGCAGAGTTTGG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGACTTTCAGACTAGCTTaGAGAGTATATGTGAAGACC +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWTFRLA*RVYVKT
Trigger: GGTCTTCACATATACTCTCAAAGCTAGTCTGAAAGT...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTATAGAACCCAAATACTaGGGAGGCTTGTGGTTCTTT +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAIEPKY*GGLWFF
Trigger: AAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTAT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTACGGCAAAGTTAATTTaGAGAAAACCACAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKATAKLI*RKPQEQ
Trigger: CTGCTCCTGTGGTTTTCTCAAAATTAACTTTGCCGT...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTACGGCAAAGTTAATTTaGAGAAAACCACAGGAGCAG +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSTAKLI*RKPQEQ
Trigger: CTGCTCCTGTGGTTTTCTCAAAATTAACTTTGCCGT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTAAAGGGAAAGCTGGTTaGGAAATACTGGGGTTATCT +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSKGKAG*EILGLS
Trigger: AGATAACCCCAGTATTTCCAAACCAGCTTTCCCTTT...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS-3UTR CAA 90 bp TGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGCAATGCAGGCATTTCTaGTTCAGCAATTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: WRSSLLNSFLYSSGEKAWQCRHF*FSNFNF
Trigger: GAAATTGAAATTGCTGAACAAGAAATGCCTGCATTG...CCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTCTGGTTACCACATTCTaGTTACCTGTACAGGTAATA +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSLVTTF*LPVQVI
Trigger: TATTACCTGTACAGGTAACAAGAATGTGGTAACCAG...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTCTGGTTACCACATTCTaGTTACCTGTACAGGTAATA +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSLVTTF*LPVQVI
Trigger: TATTACCTGTACAGGTAACAAGAATGTGGTAACCAG...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCTGGTTACCACATTCTaGTTACCTGTACAGGTAATA +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKALVTTF*LPVQVI
Trigger: TATTACCTGTACAGGTAACAAGAATGTGGTAACCAG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp TTATATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGGAATATAACCAGTACTaGCTGAGACATATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LYKEGSDSDGQDWEPNLVEYNQY*LRHMAS
Trigger: AGAGGCCATATGTCTCAGCAAGTACTGGTTATATTC...CACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTATATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTCTGTCCACATATAATTaGCTGGTGTTGCCTATTTTC +
Preference number: 5 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLLSTYN*LVLPIF
Trigger: GAAAATAGGCAACACCAGCAAATTATATGTGGACAG...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTTCTGCCTTAATCCCAGAGTaGCCATTAACAATGTATTTC +
Preference number: 5 (lower is better)
Translates to: SSLLNSFLYSSGEKAWSSALIPE*PLTMYF
Trigger: GAAATACATTGTTAATGGCAACTCTGGGATTAAGGC...AGAACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS-3UTR CAA 90 bp ATAAAGAAGGCAGTGATAGTGATGGTCAAGATTGGGAACCCAATCTTGTGTGAACAATGCAGGCATTTCTaGTTCAGCAATTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: IKKAVIVMVKIGNPILCEQCRHF*FSNFNF
Trigger: GAAATTGAAATTGCTGAACAAGAAATGCCTGCATTG...TTCACACAAGATTGGGTTCCCAATCTTGACCATCACTATCACTGCCTTCTTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GGCCTTCCTGGGAAACAAATAAATATACTCTGCTTTGTTAGGGTATCAAGCTGTCAATGCAGGCATTTCTaGTTCAGCAATTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: GLPGKQINILCFVRVSSCQCRHF*FSNFNF
Trigger: GAAATTGAAATTGCTGAACAAGAAATGCCTGCATTG...ACAGCTTGATACCCTAACAAAGCAGAGTATATTTATTTGTTTCCCAGGAAGGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp GATTGGAGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTCAATGCAGGCATTTCTaGTTCAGCAATTTCAATTTC +
Preference number: 5 (lower is better)
Translates to: DWRSSLLNSFLYSSGEKAQCRHF*FSNFNF
Trigger: GAAATTGAAATTGCTGAACAAGAAATGCCTGCATTG...AGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCTCCAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS-3UTR CAA 90 bp GATTTCAACCCTAAGATAGAACCCAAATACTTGGGAGGCTTGTGGTTCTTTCTTAAATACTTGGGAGGCTaGTGGTTCTTTCTTCTTAAT +
Preference number: 5 (lower is better)
Translates to: DFNPKIEPKYLGGLWFFLKYLGG*WFFLLN
Trigger: ATTAAGAAGAAAGAACCACAAGCCTCCCAAGTATTT...AAGAAAGAACCACAAGCCTCCCAAGTATTTGGGTTCTATCTTAGGGTTGAAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS-3UTR CAA 90 bp AGAAGCAGCTTGCTGAATTCTTTCTTGTATAGTAGTGGAGAAAAGGCTTGGAGTAAATACTTGGGAGGCTaGTGGTTCTTTCTTCTTAAT +
Preference number: 5 (lower is better)
Translates to: RSSLLNSFLYSSGEKAWSKYLGG*WFFLLN
Trigger: ATTAAGAAGAAAGAACCACAAGCCTCCCAAGTATTT...ACTCCAAGCCTTTTCTCCACTACTATACAAGAAAGAATTCAGCAAGCTGCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS CCA 72 bp GCCGCTGGTGCTGGTGATGTGGGTCGCTCCGCTTCATaGCCGACGCCTGAGGCACCTTCCCGGCGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: AAGAGDVGRSAS*PTPEAPSRRRG
Trigger: GCCCCGCCGCCGGGAAGGTGCCTCAGGCGTCGGCCATGAAGCGGAGCGACCCACATCACCAGCACCAGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS CCA 72 bp CTCGCCGCCGTCGCGGTGCCGCTGGTGCTGGTGATGTaGGTCGCTCCGCTTCATGGCCGACGCCTGAGGCAC +
Preference number: 6 (lower is better)
Translates to: LAAVAVPLVLVM*VAPLHGRRLRH
Trigger: GTGCCTCAGGCGTCGGCCATGAAGCGGAGCGACCCACATCACCAGCACCAGCGGCACCGCGACGGCGGCGAG
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS CAA 90 bp TCCGCCTCGGAGGGGCTCAGGTCCTTCAGCTCCACCTCAGGCACCTaGGCGGCAGCCGCGGCTGACACAACCTGCACCGACATCACCGCC +
Preference number: 6 (lower is better)
Translates to: SASEGLRSFSSTSGT*AAAAADTTCTDITA
Trigger: GGCGGTGATGTCGGTGCAGGTTGTGTCAGCCGCGGCTGCCGCCAAGGTGCCTGAGGTGGAGCTGAAGGACCTGAGCCCCTCCGAGGCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS TCA 72 bp CAGCTCCACCTCAGGCACCTTGGCGGCAGCCGCGGCTaGCACAACCTGCACCGACATCACCGCCTCCGCTGC +
Preference number: 6 (lower is better)
Translates to: QLHLRHLGGSRG*HNLHRHHRLRC
Trigger: GCAGCGGAGGCGGTGATGTCGGTGCAGGTTGTGTCAGCCGCGGCTGCCGCCAAGGTGCCTGAGGTGGAGCTG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS GCA 72 bp TCAGGCACCTTGGCGGCAGCCGCGGCTGACACAACCTaGACCGACATCACCGCCTCCGCTGCAACCACCGGC +
Preference number: 6 (lower is better)
Translates to: SGTLAAAAADTT*TDITASAATTG
Trigger: GCCGGTGGTTGCAGCGGAGGCGGTGATGTCGGTGCAGGTTGTGTCAGCCGCGGCTGCCGCCAAGGTGCCTGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS CAA 72 bp GAGGGGCTCAGGTCCTTCAGCTCCACCTCAGGCACCTaGGCGGCAGCCGCGGCTGACACAACCTGCACCGAC +
Preference number: 6 (lower is better)
Translates to: EGLRSFSSTSGT*AAAAADTTCTD
Trigger: GTCGGTGCAGGTTGTGTCAGCCGCGGCTGCCGCCAAGGTGCCTGAGGTGGAGCTGAAGGACCTGAGCCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000325006.7
ENST00000446544.6
CDS GCA 72 bp TCAGCAGGCGGCCCTCTGCCAGCAGTACTATCCTCTTaGCATCAGGCCATATCACATGGTCAACTTGAGATC +
Preference number: 6 (lower is better)
Translates to: SAGGPLPAVLSS*HQAISHGQLEI
Trigger: GATCTCAAGTTGACCATGTGATATGGCCTGATGGCAAGAGGATAGTACTGCTGGCAGAGGGCCGCCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS CCA 72 bp GTCAACTTGAGATCTCACTCGCTCCCAGGTCAGTTCTaGTGTCCGCAGACTCGCCACGTCAATCTCTGTGTT +
Preference number: 6 (lower is better)
Translates to: VNLRSHSLPGQF*CPQTRHVNLCV
Trigger: AACACAGAGATTGACGTGGCGAGTCTGCGGACACCAGAACTGACCTGGGAGCGAGTGAGATCTCAAGTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS CCA 72 bp GCAGACCCAACCCTAGTGAGATTCAGAAGTTCACAGTaGCTAGCAGAAGCTGCATCCCTTTTCACAGCAGCC +
Preference number: 6 (lower is better)
Translates to: ADPTLVRFRSSQ*LAEAASLFTAA
Trigger: GGCTGCTGTGAAAAGGGATGCAGCTTCTGCTAGCCACTGTGAACTTCTGAATCTCACTAGGGTTGGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS TCA 72 bp TTCTGGTCAGCAAACTGGATCATCCACTCAGGCATGTaGAAAGCTGAGGTGCCCTCATTACCGTCCCACTTC +
Preference number: 6 (lower is better)
Translates to: FWSANWIIHSGM*KAEVPSLPSHF
Trigger: GAAGTGGGACGGTAATGAGGGCACCTCAGCTTTTCACATGCCTGAGTGGATGATCCAGTTTGCTGACCAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS GCA 72 bp AGCAGCCTCCGATTCAAATCAAGAGCATTAGTCAACTaGCTGACAACCCCTTACTGGCCGGCTTCAAAGCCT +
Preference number: 6 (lower is better)
Translates to: SSLRFKSRALVN*LTTPYWPASKP
Trigger: AGGCTTTGAAGCCGGCCAGTAAGGGGTTGTCAGGCAGTTGACTAATGCTCTTGATTTGAATCGGAGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS CAA 90 bp TGCTGGGCCTTAATCCCAGAGTTGCCATTAACAATGTATTTCTTCTaGCTGCCCAGCATAGTGACATTACCAGCCCCACTGCCACCTCTG +
Preference number: 6 (lower is better)
Translates to: CWALIPELPLTMYFF*LPSIVTLPAPLPPL
Trigger: CAGAGGTGGCAGTGGGGCTGGTAATGTCACTATGCTGGGCAGCAAGAAGAAATACATTGTTAATGGCAACTCTGGGATTAAGGCCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466993.5
CDS TCA 72 bp AGCAAACTGGATCATCCACTCAGGCATGTGAAAAGCTaGGGTGCCCTCATTACCGTCCCACTTCTCCATAGT +
Preference number: 6 (lower is better)
Translates to: SKLDHPLRHVKS*GALITVPLLHS
Trigger: ACTATGGAGAAGTGGGACGGTAATGAGGGCACCTCAGCTTTTCACATGCCTGAGTGGATGATCCAGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474594.5
CDS GCA 72 bp GGGAAAGCTGGTTTGGAAATACTGGGGTTATCTGAGTaGCCCAAAGCAGACCCAACCCTAGTGAGATTCAGA +
Preference number: 6 (lower is better)
Translates to: GKAGLEILGLSE*PKADPTLVRFR
Trigger: TCTGAATCTCACTAGGGTTGGGTCTGCTTTGGGGCACTCAGATAACCCCAGTATTTCCAAACCAGCTTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS CCA 72 bp CTGGTGTCCGCAGACTCGCCACGTCAATCTCTGTGTTaGAATGTCCCATGTTACAAACGATGCAGCTATTCT +
Preference number: 6 (lower is better)
Translates to: LVSADSPRQSLC*NVPCYKRCSYS
Trigger: AGAATAGCTGCATCGTTTGTAACATGGGACATTCCAACACAGAGATTGACGTGGCGAGTCTGCGGACACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS CCA 72 bp CCCTCATTACCGTCCCACTTCTCCATAGTGCAGGCTTaGGTAAGATATGTCCTGAAGCAAAAGGGAAAGCTG +
Preference number: 6 (lower is better)
Translates to: PSLPSHFSIVQA*VRYVLKQKGKL
Trigger: CAGCTTTCCCTTTTGCTTCAGGACATATCTTACCCAAGCCTGCACTATGGAGAAGTGGGACGGTAATGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS CCA 72 bp ATCAGGCCTTTAAACTTTCCTCATCAGCAATTCTGTTaGCTCTGGTTCCAGCCAGCTTTTTGGGCTGGGGAG +
Preference number: 6 (lower is better)
Translates to: IRPLNFPHQQFC*LWFQPAFWAGE
Trigger: CTCCCCAGCCCAAAAAGCTGGCTGGAACCAGAGCCAACAGAATTGCTGATGAGGAAAGTTTAAAGGCCTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS CAA 72 bp TCTGGTGTCCGCAGACTCGCCACGTCAATCTCTGTGTaGGAATGTCCCATGTTACAAACGATGCAGCTATTC +
Preference number: 6 (lower is better)
Translates to: SGVRRLATSISV*ECPMLQTMQLF
Trigger: GAATAGCTGCATCGTTTGTAACATGGGACATTCCAACACAGAGATTGACGTGGCGAGTCTGCGGACACCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS CAA 72 bp GCCCTCATTACCGTCCCACTTCTCCATAGTGCAGGCTaGGGTAAGATATGTCCTGAAGCAAAAGGGAAAGCT +
Preference number: 6 (lower is better)
Translates to: ALITVPLLHSAG*GKICPEAKGKA
Trigger: AGCTTTCCCTTTTGCTTCAGGACATATCTTACCCAAGCCTGCACTATGGAGAAGTGGGACGGTAATGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS CAA 72 bp GATCAGGCCTTTAAACTTTCCTCATCAGCAATTCTGTaGGCTCTGGTTCCAGCCAGCTTTTTGGGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: DQAFKLSSSAIL*ALVPASFLGWG
Trigger: TCCCCAGCCCAAAAAGCTGGCTGGAACCAGAGCCAACAGAATTGCTGATGAGGAAAGTTTAAAGGCCTGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS CAA 90 bp GTGTGTGCAACCCACGATTTTGGCTCCAGCCAAAGGCTTTTCTCCTaGAGCTCTCTTCCTCAAAGCCATCAATGCAGGCATTTCTTGTTC +
Preference number: 6 (lower is better)
Translates to: VCATHDFGSSQRLFS*SSLPQSHQCRHFLF
Trigger: GAACAAGAAATGCCTGCATTGATGGCTTTGAGGAAGAGAGCTCAAGGAGAAAAGCCTTTGGCTGGAGCCAAAATCGTGGGTTGCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000461161.5
ENST00000466924.1
ENST00000466993.5
ENST00000472554.5
ENST00000474594.5
ENST00000490911.5
ENST00000491079.1
CDS CAA 90 bp ATCTGGGCCTTAATCCCAGAGTTGCCATTAACAATGTATTTCTTCTaGCTGCCCAGCATAGTGACATTACCAGCCCCACTGCCACCTCTG +
Preference number: 6 (lower is better)
Translates to: IWALIPELPLTMYFF*LPSIVTLPAPLPPL
Trigger: CAGAGGTGGCAGTGGGGCTGGTAATGTCACTATGCTGGGCAGCAAGAAGAAATACATTGTTAATGGCAACTCTGGGATTAAGGCCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS GCA 72 bp GAAGCCGCTCTGTTAAGTACCTGCAGGCTATACACATaGCAGAAGAGGGAAGCTGAAAGAGATTGCCAAAGA +
Preference number: 6 (lower is better)
Translates to: EAALLSTCRLYT*QKREAERDCQR
Trigger: TCTTTGGCAATCTCTTTCAGCTTCCCTCTTCTGGCATGTGTATAGCCTGCAGGTACTTAACAGAGCGGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472554.5
CDS CCA 72 bp GTCGAAATCCATCCATACAGGCTTGCAGGGCACAGATaGGGTCAATTTCAGTTACATACACAATGGAGCCCA +
Preference number: 6 (lower is better)
Translates to: VEIHPYRLAGHR*GQFQLHTQWSP
Trigger: TGGGCTCCATTGTGTATGTAACTGAAATTGACCCCATCTGTGCCCTGCAAGCCTGTATGGATGGATTTCGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS GCA 72 bp AGTGAGATTCAGAAGTTCACAGTGGCTAGCAGAAGCTaGATCCCTTTTCACAGCAGCCTCCGATTCAAATCA +
Preference number: 6 (lower is better)
Translates to: SEIQKFTVASRS*IPFHSSLRFKS
Trigger: TGATTTGAATCGGAGGCTGCTGTGAAAAGGGATGCAGCTTCTGCTAGCCACTGTGAACTTCTGAATCTCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS GCA 72 bp GAGCTATCTGTATATGAAGCCGCTCTGTTAAGTACCTaGAGGCTATACACATGCCAGAAGAGGGAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: ELSVYEAALLST*RLYTCQKREAE
Trigger: TTCAGCTTCCCTCTTCTGGCATGTGTATAGCCTGCAGGTACTTAACAGAGCGGCTTCATATACAGATAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472554.5
CDS CCA 72 bp TCAAGAGCATTAGTCAACTGCCTGACAACCCCTTACTaGCCGGCTTCAAAGCCTTCTGTGTCTGATTTCAAA +
Preference number: 6 (lower is better)
Translates to: SRALVNCLTTPY*PASKPSVSDFK
Trigger: TTTGAAATCAGACACAGAAGGCTTTGAAGCCGGCCAGTAAGGGGTTGTCAGGCAGTTGACTAATGCTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460109.5
ENST00000474594.5
CDS CAA 72 bp TCAGCAAACTGGATCTGCTGGGCCTTAATCCCAGAGTaGCCATTAACAATGTATTTCTTCTTGCTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: SANWICWALIPE*PLTMYFFLLPS
Trigger: GCTGGGCAGCAAGAAGAAATACATTGTTAATGGCAACTCTGGGATTAAGGCCCAGCAGATCCAGTTTGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466993.5
CDS CAA 72 bp TGGTCAGCAAACTGGATCTGGGCCTTAATCCCAGAGTaGCCATTAACAATGTATTTCTTCTTGCTGCCCAGC +
Preference number: 6 (lower is better)
Translates to: WSANWIWALIPE*PLTMYFFLLPS
Trigger: GCTGGGCAGCAAGAAGAAATACATTGTTAATGGCAACTCTGGGATTAAGGCCCAGATCCAGTTTGCTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490911.5
CDS GCA 72 bp TTACAAACGATGCAGCTATTCTTCATACGGTCCAAGTaGTCTCTGGTTACCACATTCTTGTTACCTGTACAG +
Preference number: 6 (lower is better)
Translates to: LQTMQLFFIRSK*SLVTTFLLPVQ
Trigger: CTGTACAGGTAACAAGAATGTGGTAACCAGAGAGCACTTGGACCGTATGAAGAATAGCTGCATCGTTTGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000466924.1
ENST00000474594.5
ENST00000490911.5
CDS GCA 72 bp TTTTTACCTCTGTTAAGTACCTGCAGGCTATACACATaGCAGAAGAGGGAAGCTGAAAGAGATTGCCAAAGA +
Preference number: 6 (lower is better)
Translates to: FLPLLSTCRLYT*QKREAERDCQR
Trigger: TCTTTGGCAATCTCTTTCAGCTTCCCTCTTCTGGCATGTGTATAGCCTGCAGGTACTTAACAGAGGTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491079.1
CDS TCA 72 bp GATTGCCAAAGACATTCTTCCTGGATAGCCTTAACTTaGAATGTAGGGCTAACTTTATCTTCAGAACACGCA +
Preference number: 6 (lower is better)
Translates to: DCQRHSSWIALT*NVGLTLSSEHA
Trigger: TGCGTGTTCTGAAGATAAAGTTAGCCCTACATTTCAAGTTAAGGCTATCCAGGAAGAATGTCTTTGGCAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472554.5
ENST00000491079.1
CDS CAA 72 bp AGATTGCCAAAGACATTCTTCCTGGATAGCCTTAACTaGAAATGTAGGGCTAACTTTATCTTCAGAACACGC +
Preference number: 6 (lower is better)
Translates to: RLPKTFFLDSLN*KCRANFIFRTR
Trigger: GCGTGTTCTGAAGATAAAGTTAGCCCTACATTTCAAGTTAAGGCTATCCAGGAAGAATGTCTTTGGCAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000472554.5
ENST00000491079.1
CDS CAA 90 bp TCTTGTTCAGCAATTTCAATTTCTCTTCGTCCAAACTCTGCCTGTTaGATGTTCTTAACACAGAAGTCACTGCTTCCCTTAGAGTTCTTT +
Preference number: 6 (lower is better)
Translates to: SCSAISISLRPNSAC*MFLTQKSLLPLEFF
Trigger: AAAGAACTCTAAGGGAAGCAGTGACTTCTGTGTTAAGAACATCAAACAGGCAGAGTTTGGACGAAGAGAAATTGAAATTGCTGAACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000325006.7
ENST00000446544.6
ENST00000461161.5
ENST00000466924.1
ENST00000466993.5
ENST00000472554.5
ENST00000474594.5
ENST00000490911.5
ENST00000491079.1