RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AHCYL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000168710

Ensembl transcript IDs: ENST00000359172.3, ENST00000369799.10, ENST00000393614.8, ENST00000469401.1, ENST00000475081.1, ENST00000481423.1

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGAAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTaGTCTTTGAGAGAGCCTCTCTGGATATTCTTTCAGAGCATGAGC +
Preference number: 1 (lower is better)
Translates to: RNAGKQGAWHGNTSP*SLREPLWIFFQSMS
Trigger: GCTCATGCTCTGAAAGAATATCCAGAGAGGCTCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR TCA 90 bp GTGGGCCTCCTGATCTTAACAAGCCATGCTCATTATACACATCTCTaGACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACT +
Preference number: 1 (lower is better)
Translates to: VGLLILTSHAHYTHL*TGHTTFTQETGLGT
Trigger: AGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATCAGGAGGCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR GCA 90 bp ATACTTAAAGCTCATGAGCATAAAGCTCACTTGACCATGCAGAAATaGTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATC +
Preference number: 1 (lower is better)
Translates to: ILKAHEHKAHLTMQK*WEAGCMAWEYISLI
Trigger: GATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTTCTGCATGGTCAAGTGAGCTTTATGCTCATGAGCTTTAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR CCA 90 bp CTTAAAGCTCATGAGCATAAAGCTCACTTGACCATGCAGAAATGCTaGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTT +
Preference number: 1 (lower is better)
Translates to: LKAHEHKAHLTMQKC*EAGCMAWEYISLIF
Trigger: AAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTTCTGCATGGTCAAGTGAGCTTTATGCTCATGAGCTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR CCA 90 bp ATACTGAGTAATGGCTCAAGAAATTCGCCTTCAGCACAAGCTGTATaGTACACAGCTGATAGAATTTGCTGTTGTGGCTCCAGTTCACTG +
Preference number: 1 (lower is better)
Translates to: ILSNGSRNSPSAQAV*YTADRICCCGSSSL
Trigger: CAGTGAACTGGAGCCACAACAGCAAATTCTATCAGCTGTGTACCATACAGCTTGTGCTGAAGGCGAATTTCTTGAGCCATTACTCAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR GCA 90 bp GGCTATACTATAAATCCAAGTGGGCCTCCTGATCTTAACAAGCCATaGTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCA +
Preference number: 1 (lower is better)
Translates to: GYTINPSGPPDLNKP*SLYTSLNWTYHLYA
Trigger: TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATCAGGAGGCCCACTTGGATTTATAGTATAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR CCA 90 bp TGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTaGAGGAAGGGCTATACTATAAATCCAAGTGGGCCTCCTGATCTT +
Preference number: 1 (lower is better)
Translates to: CSLVKNSKNEQVWWE*RKGYTINPSGPPDL
Trigger: AAGATCAGGAGGCCCACTTGGATTTATAGTATAGCCCTTCCTCCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR GCA 90 bp ATTCCTCCTCCTGCCCACACCTACCTCCCTTTAAATATTTTAGGTTaGAGAAGCACAGCTGACCAGAAATTTGCTCTTAAAGATAAATCC +
Preference number: 1 (lower is better)
Translates to: IPPPAHTYLPLNILG*RSTADQKFALKDKS
Trigger: GGATTTATCTTTAAGAGCAAATTTCTGGTCAGCTGTGCTTCTGCAACCTAAAATATTTAAAGGGAGGTAGGTGTGGGCAGGAGGAGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR CCA 90 bp TCAATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTaGTGGGAGTGGAGGAAGGGCTATACTATAAATCCAAGTGGGCCT +
Preference number: 1 (lower is better)
Translates to: SIECSLVKNSKNEQV*WEWRKGYTINPSGP
Trigger: AGGCCCACTTGGATTTATAGTATAGCCCTTCCTCCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR GCA 90 bp ATTTCAGCAGCTAAGAAATGGGCTCTTTTAAGGCGATTTAGACATTaGAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTAAT +
Preference number: 1 (lower is better)
Translates to: ISAAKKWALLRRFRH*RLFHREGTLAFPVN
Trigger: ATTAACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCGCCTTAAAAGAGCCCATTTCTTAGCTGCTGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR TCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAGTGGCTCCAGTTCACTaGTGCTATGAACTACGGGCT +
Preference number: 2 (lower is better)
Translates to: CWEAGCMAWEYISLIFERVAPVH*CYELRA
Trigger: AGCCCGTAGTTCATAGCATCAGTGAACTGGAGCCAC...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAGTGGTTCAGGTGGACTaGTCCTTGGTAGTATGGTCC +
Preference number: 2 (lower is better)
Translates to: CWEAGCMAWEYISLIFERVVQVD*SLVVWS
Trigger: GGACCATACTACCAAGGACCAGTCCACCTGAACCAC...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR TCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGATCATCTAAAGAGCCATaGAGCAAGTTCCTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: CWEAGCMAWEYISLIFERSSKEP*SKFLCG
Trigger: ACCACACAGGAACTTGCTTCATGGCTCTTTAGATGA...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAATCACCTTTCTGGGCTaGGAGAGTAAAATCCTTCTT +
Preference number: 2 (lower is better)
Translates to: CWEAGCMAWEYISLIFERITFLG*ESKILL
Trigger: AAGAAGGATTTTACTCTCCCAGCCCAGAAAGGTGAT...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR TCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGACATTATACACATCTCTaGACTGGACATACCACCTTT +
Preference number: 2 (lower is better)
Translates to: CWEAGCMAWEYISLIFERHYTHL*TGHTTF
Trigger: AAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATG...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCGTGGTTCAGGTGGACTaGTCCTTGGTAGTATGGTCC +
Preference number: 2 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIVVQVD*SLVVWS
Trigger: GGACCATACTACCAAGGACCAGTCCACCTGAACCAC...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAAAGAATCACCTTTCTaGGCTGGGAGAGTAAAATCC +
Preference number: 2 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEKESPF*AGRVKS
Trigger: GGATTTTACTCTCCCAGCCCAGAAAGGTGATTCTTT...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR TCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTCATCTAAAGAGCCATaGAGCAAGTTCCTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: QAMLIIHISELDIPPLRRSSKEP*SKFLCG
Trigger: ACCACACAGGAACTTGCTTCATGGCTCTTTAGATGA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATGAAGTGAAAGAGCACTaGTTTCAGCAGCTAAGAAAT +
Preference number: 2 (lower is better)
Translates to: REINMHHPHLTYLPGRYHEVKEH*FQQLRN
Trigger: ATTTCTTAGCTGCTGAAATCAGTGCTCTTTCACTTC...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGGTGGTTCAGGTGGACTaGTCCTTGGTAGTATGGTCC +
Preference number: 2 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWVVQVD*SLVVWS
Trigger: GGACCATACTACCAAGGACCAGTCCACCTGAACCAC...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAAAAGAATCACCTTTCTaGGCTGGGAGAGTAAAATCC +
Preference number: 2 (lower is better)
Translates to: ELDIPPLRRKQGLELLREKESPF*AGRVKS
Trigger: GGATTTTACTCTCCCAGCCCAGAAAGGTGATTCTTT...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATCAGCAGCTAAGAAATaGGCTCTTTTAAGGCGATTT +
Preference number: 2 (lower is better)
Translates to: ELDIPPLRRKQGLELLRESAAKK*ALLRRF
Trigger: AAATCGCCTTAAAAGAGCCCATTTCTTAGCTGCTGA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGTCATCTAAAGAGCCATaGAGCAAGTTCCTGTGTGGT +
Preference number: 2 (lower is better)
Translates to: IPPLRRKQGLELLREINMSSKEP*SKFLCG
Trigger: ACCACACAGGAACTTGCTTCATGGCTCTTTAGATGA...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR GCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGAGGCGATTTAGACATTaGAGATTGTTCCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: QAMLIIHISELDIPPLRRRRFRH*RLFHRE
Trigger: TTCTCTGTGGAACAATCTGCAATGTCTAAATCGCCT...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR GCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCGGTAGGTACCATCCCTaGTTCTCTGAAGAAGTGAAA +
Preference number: 2 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIGRYHP*FSEEVK
Trigger: TTTCACTTCTTCAGAGAAGCAGGGATGGTACCTACC...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR CAA 90 bp CAGAGCATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTaGCCCTTTATGATCTCAGTTCATAAACTCTTTGTGGTATGTAGC +
Preference number: 2 (lower is better)
Translates to: QSMSQDVLTTFFTHQ*PFMISVHKLFVVCS
Trigger: GCTACATACCACAAAGAGTTTATGAACTGAGATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCATGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR GCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGAGTTCCTGTGTGGTCTaGAGAACTTGGATAATGAGA +
Preference number: 2 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWSSCVV*RTWIMR
Trigger: TCTCATTATCCAAGTTCTGCAGACCACACAGGAACT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGAGTTCCTGTGTGGTCTaGAGAACTTGGATAATGAGA +
Preference number: 2 (lower is better)
Translates to: IKTKVPRNGKERITFLGWSSCVV*RTWIMR
Trigger: TCTCATTATCCAAGTTCTGCAGACCACACAGGAACT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR GCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAAGGCGATTTAGACATTaGAGATTGTTCCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYARRFRH*RLFHRE
Trigger: TTCTCTGTGGAACAATCTGCAATGTCTAAATCGCCT...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTATCACCTTTCTGGGCTaGGAGAGTAAAATCCTTCTT +
Preference number: 2 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLITFLG*ESKILL
Trigger: AAGAAGGATTTTACTCTCCCAGCCCAGAAAGGTGAT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTAAAGAATCACCTTTCTaGGCTGGGAGAGTAAAATCC +
Preference number: 2 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVKESPF*AGRVKS
Trigger: GGATTTTACTCTCCCAGCCCAGAAAGGTGATTCTTT...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR CAA 90 bp GCAGCTAAGAAATGGGCTCTTTTAAGGCGATTTAGACATTGCAGATaGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTAATAAGGTA +
Preference number: 2 (lower is better)
Translates to: AAKKWALLRRFRHCR*FHREGTLAFPVNKV
Trigger: TACCTTATTAACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCGCCTTAAAAGAGCCCATTTCTTAGCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR CAA 90 bp TTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATaGGTAACAACTAACCACTCAAGCAATTCCTCAGCATTAACACCA +
Preference number: 2 (lower is better)
Translates to: FSRLSILSSKGSKEK*VTTNHSSNSSALTP
Trigger: TGGTGTTAATGCTGAGGAATTGCTTGAGTGGTTAGTTGTTACCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR TCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGGAAGTGAAAGAGCACTaGTTTCAGCAGCTAAGAAAT +
Preference number: 2 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWEVKEH*FQQLRN
Trigger: ATTTCTTAGCTGCTGAAATCAGTGCTCTTTCACTTC...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGTCAGCAGCTAAGAAATaGGCTCTTTTAAGGCGATTT +
Preference number: 2 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWSAAKK*ALLRRF
Trigger: AAATCGCCTTAAAAGAGCCCATTTCTTAGCTGCTGA...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTCAGCAGCTAAGAAATaGGCTCTTTTAAGGCGATTT +
Preference number: 2 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLSAAKK*ALLRRF
Trigger: AAATCGCCTTAAAAGAGCCCATTTCTTAGCTGCTGA...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR TCA 72 bp GGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTaGTCTTTGAGAGAGCCTCTCTGGATATTCTTTCAG +
Preference number: 3 (lower is better)
Translates to: GKQGAWHGNTSP*SLREPLWIFFQ
Trigger: CTGAAAGAATATCCAGAGAGGCTCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR GCA 72 bp GCTCATGAGCATAAAGCTCACTTGACCATGCAGAAATaGTGGGAAGCAGGGTGCATGGCATGGGAATACATC +
Preference number: 3 (lower is better)
Translates to: AHEHKAHLTMQK*WEAGCMAWEYI
Trigger: GATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTTCTGCATGGTCAAGTGAGCTTTATGCTCATGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR CCA 72 bp CATGAGCATAAAGCTCACTTGACCATGCAGAAATGCTaGGAAGCAGGGTGCATGGCATGGGAATACATCTCC +
Preference number: 3 (lower is better)
Translates to: HEHKAHLTMQKC*EAGCMAWEYIS
Trigger: GGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTTCTGCATGGTCAAGTGAGCTTTATGCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR TCA 72 bp CAGCTGATAGAATTTGCTGTTGTGGCTCCAGTTCACTaGTGCTATGAACTACGGGCTAGAAACAGAGGGACT +
Preference number: 3 (lower is better)
Translates to: QLIEFAVVAPVH*CYELRARNRGT
Trigger: AGTCCCTCTGTTTCTAGCCCGTAGTTCATAGCATCAGTGAACTGGAGCCACAACAGCAAATTCTATCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR CCA 72 bp CTTAACAAGCCATGCTCATTATACACATCTCTGAACTaGACATACCACCTTTACGCAGGAAACAGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: LNKPCSLYTSLN*TYHLYAGNRAW
Trigger: CCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR CCA 72 bp AATGGCTCAAGAAATTCGCCTTCAGCACAAGCTGTATaGTACACAGCTGATAGAATTTGCTGTTGTGGCTCC +
Preference number: 3 (lower is better)
Translates to: NGSRNSPSAQAV*YTADRICCCGS
Trigger: GGAGCCACAACAGCAAATTCTATCAGCTGTGTACCATACAGCTTGTGCTGAAGGCGAATTTCTTGAGCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR TCA 72 bp CTGATCTTAACAAGCCATGCTCATTATACACATCTCTaGACTGGACATACCACCTTTACGCAGGAAACAGGG +
Preference number: 3 (lower is better)
Translates to: LILTSHAHYTHL*TGHTTFTQETG
Trigger: CCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR GCA 72 bp TTTTCTTGCCCTGGCCCAATTTATCATTCCTCCTCCTaGCCACACCTACCTCCCTTTAAATATTTTAGGTTG +
Preference number: 3 (lower is better)
Translates to: FSCPGPIYHSSS*PHLPPFKYFRL
Trigger: CAACCTAAAATATTTAAAGGGAGGTAGGTGTGGGCAGGAGGAGGAATGATAAATTGGGCCAGGGCAAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR-3UTR CAA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTCGCAGGAAACAGGGCTaGGAACTTCTAAGGGAAATT +
Preference number: 3 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLRRKQG*ELLREI
Trigger: AATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR GCA 72 bp CCTGCCCACACCTACCTCCCTTTAAATATTTTAGGTTaGAGAAGCACAGCTGACCAGAAATTTGCTCTTAAA +
Preference number: 3 (lower is better)
Translates to: PAHTYLPLNILG*RSTADQKFALK
Trigger: TTTAAGAGCAAATTTCTGGTCAGCTGTGCTTCTGCAACCTAAAATATTTAAAGGGAGGTAGGTGTGGGCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR GCA 72 bp GCTAAGAAATGGGCTCTTTTAAGGCGATTTAGACATTaGAGATTGTTCCACAGAGAAGGTACCTTAGCATTT +
Preference number: 3 (lower is better)
Translates to: AKKWALLRRFRH*RLFHREGTLAF
Trigger: AAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCGCCTTAAAAGAGCCCATTTCTTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR CCA 72 bp AGAAGTGAAAGAGCACTGATTTCAGCAGCTAAGAAATaGGCTCTTTTAAGGCGATTTAGACATTGCAGATTG +
Preference number: 3 (lower is better)
Translates to: RSERALISAAKK*ALLRRFRHCRL
Trigger: CAATCTGCAATGTCTAAATCGCCTTAAAAGAGCCCATTTCTTAGCTGCTGAAATCAGTGCTCTTTCACTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCCTCCTGCCGGCCCCTaGGTCGAGCTGCGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHPPAGP*VELRRL
Trigger: AAGCCGACGCAGCTCGACGCAGGGGCCGGCAGGAGG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATAGCTGCGTCGGCTTCTaGGGTGCTGTGGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHSCVGF*GAVAHA
Trigger: GGCGTGGGCCACAGCACCTCAGAAGCCGACGCAGCT...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATGATCGCCCACCCTCCTaGCGGCCCCTGCGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHDRPPS*RPLRRA
Trigger: AGCTCGACGCAGGGGCCGGCAGGAGGGTGGGCGATC...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGACGTCGGCTTCTGAGGTaGTGTGGCCCACGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERRRLLR*CGPRLV
Trigger: GACAAGGCGTGGGCCACAGCACCTCAGAAGCCGACG...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGCGTCGGCTTCTGAGGTaGTGTGGCCCACGCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFERRLLR*CGPRLV
Trigger: GACAAGGCGTGGGCCACAGCACCTCAGAAGCCGACG...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGACGTCCTCGATCTCCTTaGCCTGCTTCAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERRPRSP*PASAPP
Trigger: GGGAGGAGCTGAAGCAGGCCAAGGAGATCGAGGACG...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATAGGTCAGAGGGCAGGTaGATGTGGGTCCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHRSEGR*MWVPSL
Trigger: GAGGGAAGGGACCCACATTCACCTGCCCTCTGACCT...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGACGTCAGCTCCGGAGTaGGGAGGCTGGTCACATCGA +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFETSAPE*GGWSHR
Trigger: TCGATGTGACCAGCCTCCGCACTCCGGAGCTGACGT...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACCTCCTGCCGGCCCCTaGGTCGAGCTGCGTCGGCTT +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAPPAGP*VELRRL
Trigger: AAGCCGACGCAGCTCGACGCAGGGGCCGGCAGGAGG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAACCCATGCCCCCGGACTaGTCACAAGGGTCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREPMPPD*SQGSAE
Trigger: CTCAGCTGACCCTTGTGACCAGTCCGGGGGCATGGG...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393614.8
3UTR CAA 72 bp CTTCCCTCCAGCAGGGCTAACGTGATGGATACACTGTaGGCCAGGTTACCTCCCCTAACAGATGTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LPSSRANVMDTL*ARLPPLTDVVF
Trigger: GAACACCACATCTGTTAGGGGAGGTAACCTGGCCAACAGTGTATCCATCACGTTAGCCCTGCTGGAGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAGCTGCGTCGGCTTCTaGGGTGCTGTGGCCCACGCC +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMSCVGF*GAVAHA
Trigger: GGCGTGGGCCACAGCACCTCAGAAGCCGACGCAGCT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCAGCACAGCAGCCCTTaGCTACCTCACCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHQHSSP*LPHHSH
Trigger: GTGGCTATGGTGAGGTAGGCAAGGGCTGCTGTGCTG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTGATCGCCCACCCTCCTaGCGGCCCCTGCGTCGAGCT +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVDRPPS*RPLRRA
Trigger: AGCTCGACGCAGGGGCCGGCAGGAGGGTGGGCGATC...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGGCCAGAGCCCGGGCTTaGTCGCGTCCCTTCCGCGAG +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWARARA*SRPFRE
Trigger: CTCGCGGAAGGGACGCGAGCAAGCCCGGGCTCTGGC...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR CCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGGCTTCTGAGGTGCTGTaGCCCACGCCTTGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEASEVL*PTPCLF
Trigger: GAACAGACAAGGCGTGGGCCACAGCACCTCAGAAGC...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATCGTCCTCGATCTCCTTaGCCTGCTTCAGCTCCTCCC +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHRPRSP*PASAPP
Trigger: GGGAGGAGCTGAAGCAGGCCAAGGAGATCGAGGACG...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCGATCCCGGAGGACTTaGGCCGAGGGACAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHRSRRT*AEGQRK
Trigger: TTTCCTTTGTCCCTCGGCCCAAGTCCTCCGGGATCG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR TCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGATTAGCTTTACCACCCTaGACCCATCCATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERLALPP*THPCRP
Trigger: AGGCCTGCATGGATGGGTTCAGGGTGGTAAAGCTAA...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGACCTGTGTTGTGGCTGTaGTGGACAGAACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERPVLWL*WTEQRW
Trigger: CCACCTTTGTTCTGTCCATCACAGCCACAACACAGG...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGCCAGCAGGGCTAACGTaGTGGATACACTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEPAGLT*WIHCWP
Trigger: TGGCCAACAGTGTATCCATCACGTTAGCCCTGCTGG...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGGTCACAAGGGTCAGCTaGGTTGGTTCACCCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRVTRVS*VGSPPP
Trigger: GGGAGGGGGTGAACCAACTCAGCTGACCCTTGTGAC...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCTTCCAAGCGAACACTaGAACTCCAGCCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHLPSEH*NSSLSQ
Trigger: CTGGCTGAGGCTGGAGTTGCAGTGTTCGCTTGGAAG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGTGCTGCCCTTGGAGTTaGTTTGCTGCTTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFECCPWS*FAASLG
Trigger: CCCGAGAGAAGCAGCAAACCAACTCCAAGGGCAGCA...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATGCTTCTGAGGTGCTGTaGCCCACGCCTTGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHASEVL*PTPCLF
Trigger: GAACAGACAAGGCGTGGGCCACAGCACCTCAGAAGC...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGACCTGAGCACGTTTCCTaGGTGAAATCAGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERPEHVS*VKSEQT
Trigger: TGTCTGCTCTGATTTCACTCAGGAAACGTGCTCAGG...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGCCGCTGTCTGGGCTGTaGTGTGTGTACAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRPLSGL*CVYSPL
Trigger: TAGTGGGCTGTACACACATCACAGCCCAGACAGCGG...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATGACATGGTCCACCTaGGAACGTACTCGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREMTWST*ERTRSH
Trigger: GTGGGAGCGAGTACGTTCTCAGGTGGACCATGTCAT...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATTGGAGCAGCTCAAATTaGGTAGACGACCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHWSSSN*VDDPLP
Trigger: TGGCAGAGGGTCGTCTACTCAATTTGAGCTGCTCCA...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATAAGGTGGGCATCAAATaGTGGCAGATGCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHKVGIK*WQMQAG
Trigger: GCCAGCTTGCATCTGCCATCATTTGATGCCCACCTT...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAAGGTGGGCATCAAATaGTGGCAGATGCAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEKVGIK*WQMQAG
Trigger: GCCAGCTTGCATCTGCCATCATTTGATGCCCACCTT...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATGTGGCTCCAGTTCACTaGTGCTATGAACTACGGGCT +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHVAPVH*CYELRA
Trigger: AGCCCGTAGTTCATAGCATCAGTGAACTGGAGCCAC...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAAGGATCATGTTGGCCTaGCACCCATCCATGTTCACA +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERRIMLA*HPSMFT
Trigger: TGTGAACATGGATGGGTGGCAGGCCAACATGATCCT...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATAGCAAGTACACATCCTaGTTGTATCGCCCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHSKYTS*LYRPSG
Trigger: ACCCGAGGGGCGATACAAGCAGGATGTGTACTTGCT...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATTGCTGCCCTTGGAGTTaGTTTGCTGCTTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHCCPWS*FAASLG
Trigger: CCCGAGAGAAGCAGCAAACCAACTCCAAGGGCAGCA...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATGTGGTTCAGGTGGACTaGTCCTTGGTAGTATGGTCC +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHVVQVD*SLVVWS
Trigger: GGACCATACTACCAAGGACCAGTCCACCTGAACCAC...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATAAGGGTCAGCTGAGTTaGTTCACCCCCTCCCACTCT +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHKGQLS*FTPSHS
Trigger: AGAGTGGGAGGGGGTGAACCAACTCAGCTGACCCTT...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR TCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAGTCAGTGGAGGACTGTaGGATCGAGCGAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREVSGGL*DRARQR
Trigger: TCTTTGTCTCGCTCGATCTCACAGTCCTCCACTGAC...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCCTGAGCACGTTTCCTaGGTGAAATCAGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHPEHVS*VKSEQT
Trigger: TGTCTGCTCTGATTTCACTCAGGAAACGTGCTCAGG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGGGGAATACATCTCCCTaGTCTTTGAGAGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEGNTSP*SLREPL
Trigger: GAGAGGCTCTCTCAAAGATCAGGGAGATGTATTCCC...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAAGCATAAAGCTCACTTaGCCATGCAGAAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERSIKLT*PCRNAG
Trigger: CCCAGCATTTCTGCATGGTCAAGTGAGCTTTATGCT...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAGGTCAGAGGGCAGGTaGATGTGGGTCCCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMRSEGR*MWVPSL
Trigger: GAGGGAAGGGACCCACATTCACCTGCCCTCTGACCT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATCCCTTGGAGTTGGTTTaGTGCTTCTCTCGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHPLELV*CFSRGE
Trigger: TTCTCCCCGAGAGAAGCAGCAAACCAACTCCAAGGG...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGACACAGAAATTGCTGCTaGCCTTGGAGTTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERHRNCC*PWSWFA
Trigger: AGCAAACCAACTCCAAGGGCAGCAGCAATTTCTGTG...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATGCTGGGAAGCAGGGTaGATGGCATGGGAATACATC +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLRECWEAG*MAWEYI
Trigger: GATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATTTGACCATGCAGAAATaGTGGGAAGCAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHLTMQK*WEAGCM
Trigger: CATGCACCCTGCTTCCCAGCATTTCTGCATGGTCAA...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGATCAACACCGCTGTCTaGGCTGTGATGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEINTAV*AVMCVQ
Trigger: CTGTACACACATCACAGCCCAGACAGCGGTGTTGAT...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAACTCGTTTGCCATCTaGCCAGATGACATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFENSFAI*PDDMVH
Trigger: GTGGACCATGTCATCTGGCCAGATGGCAAACGAGTT...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAATGTCATCAGCAAACTaGATTTGCTTCTTGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERMSSAN*ICFLGA
Trigger: GGCGCCCAAGAAGCAAATCCAGTTTGCTGATGACAT...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369799.10
CDS-3UTR TCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATTGGTGGGGAATTTGGTaGACTCCTGCATGTCATCAG +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHWWGIW*TPACHQ
Trigger: CTGATGACATGCAGGAGTTCACCAAATTCCCCACCA...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATTGTGTAGGATGCAGCTaGACTGTAGCTGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHCVGCS*TVAVSG
Trigger: TCCACTGACAGCTACAGTTCAGCTGCATCCTACACA...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCCGCTGTCTGGGCTGTaGTGTGTGTACAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMPLSGL*CVYSPL
Trigger: TAGTGGGCTGTACACACATCACAGCCCAGACAGCGG...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTTAGCTTTACCACCCTaGACCCATCCATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRLALPP*THPCRP
Trigger: AGGCCTGCATGGATGGGTTCAGGGTGGTAAAGCTAA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCATGACATGGTCCACCTaGGAACGTACTCGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSMTWST*ERTRSH
Trigger: GTGGGAGCGAGTACGTTCTCAGGTGGACCATGTCAT...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCTGCCATCTGGCCAGATaGCATGGTCCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSCHLAR*HGPPEN
Trigger: GTTCTCAGGTGGACCATGTCATCTGGCCAGATGGCA...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGCCTGTGTTGTGGCTGTaGTGGACAGAACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRPVLWL*WTEQRW
Trigger: CCACCTTTGTTCTGTCCATCACAGCCACAACACAGG...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATTTGGAGTTGGTTTGCTaGTTCTCTCGGGGAGAAACC +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHLELVC*FSRGET
Trigger: GGTTTCTCCCCGAGAGAAGCAGCAAACCAACTCCAA...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCAGCACAGCAGCCCTTaGCTACCTCACCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMQHSSP*LPHHSH
Trigger: GTGGCTATGGTGAGGTAGGCAAGGGCTGCTGTGCTG...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGACGTCAGCTCCGGAGTaGGGAGGCTGGTCACATCGA +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWTSAPE*GGWSHR
Trigger: TCGATGTGACCAGCCTCCGCACTCCGGAGCTGACGT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATTGACCATGCAGAAATaGTGGGAAGCAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLRELTMQK*WEAGCM
Trigger: CATGCACCCTGCTTCCCAGCATTTCTGCATGGTCAA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATTTGTTCTTCCCAAGTTaGTCTCCACATGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHLFFPS*SPHAPS
Trigger: AGAGGGAGCATGTGGAGAGCAACTTGGGAAGAACAA...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAACAGAGAAGAAAGCATaGTCACACTGGCAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERTEKKA*SHWQGV
Trigger: TACTCCTTGCCAGTGTGACCATGCTTTCTTCTCTGT...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTGGTGGGGAATTTGGTaGACTCCTGCATGTCATCAG +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRWWGIW*TPACHQ
Trigger: CTGATGACATGCAGGAGTTCACCAAATTCCCCACCA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTGTGTAGGATGCAGCTaGACTGTAGCTGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRCVGCS*TVAVSG
Trigger: TCCACTGACAGCTACAGTTCAGCTGCATCCTACACA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAAGGGCTTCTCCCCCTaGGCACGTTTCCTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMKGFSP*ARFLSE
Trigger: TTCACTCAGGAAACGTGCTCAGGGGGAGAAGCCCTT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGCCGCTGTCTGGGCTGTaGTGTGTGTACAGCCCACTA +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWPLSGL*CVYSPL
Trigger: TAGTGGGCTGTACACACATCACAGCCCAGACAGCGG...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACCAGCAGGGCTAACGTaGTGGATACACTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAPAGLT*WIHCWP
Trigger: TGGCCAACAGTGTATCCATCACGTTAGCCCTGCTGG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGTTAGCAGGTTTTGGCTaGTCCCGGCTCTCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMLAGFG*SRLSFP
Trigger: AGGGAAGGAGAGCCGGGAGCAGCCAAAACCTGCTAA...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATTCACACAGAAATTGCTaGTGCCCTTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHSHRNC*CPWSWF
Trigger: AAACCAACTCCAAGGGCAGCAGCAATTTCTGTGTGA...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATCTTCACACAGAAATTaGTGCTGCCCTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLRESSHRN*CCPWSW
Trigger: CCAACTCCAAGGGCAGCAGCAATTTCTGTGTGAAGA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGAGACATGTCTTGCTCTaGAATCTCAATCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRRHVLL*NLNLPA
Trigger: CGCCGGGAGATTGAGATTGCAGAGCAAGACATGTCT...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTCAGCACAGCAGCCCTTaGCTACCTCACCATAGCCAC +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVQHSSP*LPHHSH
Trigger: GTGGCTATGGTGAGGTAGGCAAGGGCTGCTGTGCTG...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAACAGCTGATAGAATTTaGTGTTGTGGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERTADRI*CCGSSS
Trigger: TGAACTGGAGCCACAACAGCAAATTCTATCAGCTGT...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATTCAGGCCATCCAAAATaGATTCTCGGCAGCAGTACA +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHSGHPK*ILGSST
Trigger: TGTACTGCTGCCGAGAATCCATTTTGGATGGCCTGA...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGAACTCGTTTGCCATCTaGCCAGATGACATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRNSFAI*PDDMVH
Trigger: GTGGACCATGTCATCTGGCCAGATGGCAAACGAGTT...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCGCAGGGTGCATGGCATaGGAATACATCTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSAGCMA*EYISLI
Trigger: GATCAGGGAGATGTATTCCCATGCCATGCACCCTGC...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAAAGCATGGTCACACTaGCAAGGAGTAAGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEKAWSH*QGVRRD
Trigger: ATCCCTTCTTACTCCTTGCCAGTGTGACCATGCTTT...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCTGGTGGGGAATTTGGTaGACTCCTGCATGTCATCAG +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSWWGIW*TPACHQ
Trigger: CTGATGACATGCAGGAGTTCACCAAATTCCCCACCA...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGAAGGGCTTCTCCCCCTaGGCACGTTTCCTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWKGFSP*ARFLSE
Trigger: TTCACTCAGGAAACGTGCTCAGGGGGAGAAGCCCTT...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGTTGCTCCAAGAGCTTTaGGAGCAGCACAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWLLQEL*EQHSSP
Trigger: AGGGCTGCTGTGCTGCTCTCAAAGCTCTTGGAGCAA...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGTTGCTCCAAGAGCTTTaGGAGCAGCACAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWLLQEL*EQHSSP
Trigger: AGGGCTGCTGTGCTGCTCTCAAAGCTCTTGGAGCAA...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGTTGCTCCAAGAGCTTTaGGAGCAGCACAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWLLQEL*EQHSSP
Trigger: AGGGCTGCTGTGCTGCTCTCAAAGCTCTTGGAGCAA...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATCATCGACTTGCCGGATaGCTTCATTTAGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHHRLAG*LHLALP
Trigger: TGGTAAAGCTAAATGAAGTCATCCGGCAAGTCGATG...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGATGACATGGTCCACCTaGGAACGTACTCGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWMTWST*ERTRSH
Trigger: GTGGGAGCGAGTACGTTCTCAGGTGGACCATGTCAT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTGCCATCTGGCCAGATaGCATGGTCCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLCHLAR*HGPPEN
Trigger: GTTCTCAGGTGGACCATGTCATCTGGCCAGATGGCA...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTGCCATCTGGCCAGATaGCATGGTCCACCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVCHLAR*HGPPEN
Trigger: GTTCTCAGGTGGACCATGTCATCTGGCCAGATGGCA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATCTAGCACTAACGTATaGCCCAACTTTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLRESSTNV*PNFEGS
Trigger: TGATCCCTCAAAGTTGGGTCATACGTTAGTGCTAGA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATGCAAACTGGATTTGCTaGAGGGAGATTTTCTGTACA +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHANWIC*REIFCT
Trigger: TGTACAGAAAATCTCCCTTCAGCAAATCCAGTTTGC...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR GCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATCACACAGAAATTGCTaGTGCCCTTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLRESHRNC*CPWSWF
Trigger: AAACCAACTCCAAGGGCAGCAGCAATTTCTGTGTGA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGCTTCCAAGCGAACACTaGAACTCCAGCCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWLPSEH*NSSLSQ
Trigger: CTGGCTGAGGCTGGAGTTGCAGTGTTCGCTTGGAAG...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGCTTCCAAGCGAACACTaGAACTCCAGCCTCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWLPSEH*NSSLSQ
Trigger: CTGGCTGAGGCTGGAGTTGCAGTGTTCGCTTGGAAG...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATATTACGACATCGACTTaGCGGATGACTTCATTTAGC +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHITTST*RMTSFS
Trigger: GCTAAATGAAGTCATCCGGCAAGTCGATGTCGTAAT...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTTCATGCGATCCAAGTaGTCCCGTGTCACTACATTC +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRFMRSK*SRVTTF
Trigger: GAATGTAGTGACACGGGAGCACTTGGATCGCATGAA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATAGAGTTCTATCAGTaGCAAAGCCTGTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREIEFYQ*QSLCCG
Trigger: GCCACAACACAGGCTTTGGCACTGATAGAACTCTAT...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATATAGAGTTCTATCAGTaGCAAAGCCTGTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHIEFYQ*QSLCCG
Trigger: GCCACAACACAGGCTTTGGCACTGATAGAACTCTAT...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGGTATCGCCCCTCGGGTaGATTATAGAGTTCTATCAG +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRVSPLG*IIEFYQ
Trigger: CTGATAGAACTCTATAATGCACCCGAGGGGCGATAC...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGTCAAATGATGGCAGATaGAAGCTGGCAACGTATTCA +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFESNDGR*KLATYS
Trigger: TGAATACGTTGCCAGCTTGCATCTGCCATCATTTGA...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATTCAAATGATGGCAGATaGAAGCTGGCAACGTATTCA +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHSNDGR*KLATYS
Trigger: TGAATACGTTGCCAGCTTGCATCTGCCATCATTTGA...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAGATTGGTTGGTTAAGTaGCCGAGGAAAATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREDWLVK*PRKIGL
Trigger: AAGGCCTATTTTCCTCGGGCACTTAACCAACCAATC...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGTTTCTGTACACCCCATaGCCCCGGACTGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWFLYTP*PRTGHK
Trigger: CTTGTGACCAGTCCGGGGGCATGGGGTGTACAGAAA...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR CCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGTGCTGCCCTTGGAGTTaGTTTGCTGCTTCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWCCPWS*FAASLG
Trigger: CCCGAGAGAAGCAGCAAACCAACTCCAAGGGCAGCA...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACATCCAGGATCATGTTaGCCTGCCACCCATCCATGT +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAHPGSC*PATHPC
Trigger: ACATGGATGGGTGGCAGGCCAACATGATCCTGGATG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCATCCAGGATCATGTTaGCCTGCCACCCATCCATGT +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMHPGSC*PATHPC
Trigger: ACATGGATGGGTGGCAGGCCAACATGATCCTGGATG...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATATGGCAGATGCAAGCTaGCAACGTATTCATCCATTT +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHMADAS*QRIHPF
Trigger: AAATGGATGAATACGTTGCCAGCTTGCATCTGCCAT...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGGTGGTTCAGGTGGACTaGTCCTTGGTAGTATGGTCC +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMVVQVD*SLVVWS
Trigger: GGACCATACTACCAAGGACCAGTCCACCTGAACCAC...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAACCATGCAGAAATGCTaGGAAGCAGGGTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYATMQKC*EAGCMA
Trigger: TGCCATGCACCCTGCTTCCCAGCATTTCTGCATGGT...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATGGTGTTCTGATTGGTTaGTTAAGTGCCCGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHGVLIG*LSARGK
Trigger: TTTTCCTCGGGCACTTAACCAACCAATCAGAACACC...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR CAA 72 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTaGGAACTTCTAAGGGAAATTAACATGCACCACCCA +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQG*ELLREINMHHP
Trigger: TGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCCAGAAACCAGTCTTCTaGGACTTAGCAGGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSQKPVF*DLAGFG
Trigger: GCCAAAACCTGCTAAGTCTCAGAAGACTGGTTTCTG...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS-3UTR TCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCAAATTCTGCCTGCTTaGTGTTCTTCACACAGAAAT +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHQILPA*CSSHRN
Trigger: ATTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGTTAGCTTTACCACCCTaGACCCATCCATGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWLALPP*THPCRP
Trigger: AGGCCTGCATGGATGGGTTCAGGGTGGTAAAGCTAA...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTGGAGCAGCTCAAATTaGGTAGACGACCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLWSSSN*VDDPLP
Trigger: TGGCAGAGGGTCGTCTACTCAATTTGAGCTGCTCCA...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTGGAGCAGCTCAAATTaGGTAGACGACCCTCTGCCA +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVWSSSN*VDDPLP
Trigger: TGGCAGAGGGTCGTCTACTCAATTTGAGCTGCTCCA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTCCTGTGTTGTGGCTGTaGTGGACAGAACAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVPVLWL*WTEQRW
Trigger: CCACCTTTGTTCTGTCCATCACAGCCACAACACAGG...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTGTGGCTCCAGTTCACTaGTGCTATGAACTACGGGCT +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVVAPVH*CYELRA
Trigger: AGCCCGTAGTTCATAGCATCAGTGAACTGGAGCCAC...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGGAATACATCTCCCTaGTCTTTGAGAGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAGNTSP*SLREPL
Trigger: GAGAGGCTCTCTCAAAGATCAGGGAGATGTATTCCC...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTCTTCCATTCCCTTGTaGAGAAACCAGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRSSIPL*RNQSSE
Trigger: CTCAGAAGACTGGTTTCTGCACAAGGGAATGGAAGA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGCCCTTGGAGTTGGTTTaGTGCTTCTCTCGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWPLELV*CFSRGE
Trigger: TTCTCCCCGAGAGAAGCAGCAAACCAACTCCAAGGG...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTCCCTTGGAGTTGGTTTaGTGCTTCTCTCGGGGAGAA +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLPLELV*CFSRGE
Trigger: TTCTCCCCGAGAGAAGCAGCAAACCAACTCCAAGGG...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAAGACATGTCTTGCTCTaGAATCTCAATCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYARHVLL*NLNLPA
Trigger: CGCCGGGAGATTGAGATTGCAGAGCAAGACATGTCT...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAGACATGTCTTGCTCTaGAATCTCAATCTCCCGGCG +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMRHVLL*NLNLPA
Trigger: CGCCGGGAGATTGAGATTGCAGAGCAAGACATGTCT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAAGGATCATGTTGGCCTaGCACCCATCCATGTTCACA +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYARIMLA*HPSMFT
Trigger: TGTGAACATGGATGGGTGGCAGGCCAACATGATCCT...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGAGCAAGTACACATCCTaGTTGTATCGCCCCTCGGGT +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWSKYTS*LYRPSG
Trigger: ACCCGAGGGGCGATACAAGCAGGATGTGTACTTGCT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAAGTTCCTGTGTGGTCTaGAGAACTTGGATAATGAGA +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLRESSCVV*RTWIMR
Trigger: TCTCATTATCCAAGTTCTGCAGACCACACAGGAACT...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATAGGCGATTTAGACATTaGAGATTGTTCCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHRRFRH*RLFHRE
Trigger: TTCTCTGTGGAACAATCTGCAATGTCTAAATCGCCT...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGTGCTGGGAAGCAGGGTaGATGGCATGGGAATACATC +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWCWEAG*MAWEYI
Trigger: GATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCTCCCTGCTAAGAAGCTaGAGGGTGAAAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSSLLRS*RVKAFL
Trigger: AAGGAAAGCTTTCACCCTGCAGCTTCTTAGCAGGGA...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGAGACTTAGCAGGTTTTaGCTGCTCCCGGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWRLSRF*LLPALL
Trigger: AAGGAGAGCCGGGAGCAGCCAAAACCTGCTAAGTCT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS-3UTR CCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTCATCCAGGATCATGTTaGCCTGCCACCCATCCATGT +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVHPGSC*PATHPC
Trigger: ACATGGATGGGTGGCAGGCCAACATGATCCTGGATG...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATCATCGATTTCTGTGTTaGAGTGGCCCATATTGCATA +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHHRFLC*SGPYCI
Trigger: TATGCAATATGGGCCACTCCAACACAGAAATCGATG...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATAAAGAATCACCTTTCTaGGCTGGGAGAGTAAAATCC +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHKESPF*AGRVKS
Trigger: GGATTTTACTCTCCCAGCCCAGAAAGGTGATTCTTT...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATTACACATCTCTGAACTaGACATACCACCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHYTSLN*TYHLYA
Trigger: TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTA...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATACACATCTCTGAACTaGACATACCACCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREYTSLN*TYHLYA
Trigger: TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTGCAGGGTGCATGGCATaGGAATACATCTCCCTGATC +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLAGCMA*EYISLI
Trigger: GATCAGGGAGATGTATTCCCATGCCATGCACCCTGC...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGACCATGCAGAAATGCTaGGAAGCAGGGTGCATGGCA +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWTMQKC*EAGCMA
Trigger: TGCCATGCACCCTGCTTCCCAGCATTTCTGCATGGT...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGAAAGCATGGTCACACTaGCAAGGAGTAAGAAGGGAT +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRKAWSH*QGVRRD
Trigger: ATCCCTTCTTACTCCTTGCCAGTGTGACCATGCTTT...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTGTGTAGGATGCAGCTaGACTGTAGCTGTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVCVGCS*TVAVSG
Trigger: TCCACTGACAGCTACAGTTCAGCTGCATCCTACACA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAGCACGTTTCCTGAGTaGAATCAGAGCAGACATGTC +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMSTFPE*NQSRHV
Trigger: GACATGTCTGCTCTGATTTCACTCAGGAAACGTGCT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGCCTGAGCACGTTTCCTaGGTGAAATCAGAGCAGACA +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWPEHVS*VKSEQT
Trigger: TGTCTGCTCTGATTTCACTCAGGAAACGTGCTCAGG...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATGGCCCATTTTTGTTaGGTCCCAGATATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREMAHFC*VPDILL
Trigger: AAGCAAAATATCTGGGACTCAACAAAAATGGGCCAT...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATCATTATACACATCTCTaGACTGGACATACCACCTTT +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHHYTHL*TGHTTF
Trigger: AAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATG...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGCTCAGTGCTTTATACTaGGTAATGGCTCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFELSALY*VMAQEI
Trigger: AATTTCTTGAGCCATTACTCAGTATAAAGCACTGAG...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAGCATAAAGCTCACTTaGCCATGCAGAAATGCTGGG +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMSIKLT*PCRNAG
Trigger: CCCAGCATTTCTGCATGGTCAAGTGAGCTTTATGCT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCTCTAGCACTAACGTATaGCCCAACTTTGAGGGATCA +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSSSTNV*PNFEGS
Trigger: TGATCCCTCAAAGTTGGGTCATACGTTAGTGCTAGA...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACTTTGTTACATGGCTTaGCAGAGACAGAGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYALCYMA*QRQSPY
Trigger: GTAAGGGCTCTGTCTCTGTCAAGCCATGTAACAAAG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCTTTGTTACATGGCTTaGCAGAGACAGAGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMLCYMA*QRQSPY
Trigger: GTAAGGGCTCTGTCTCTGTCAAGCCATGTAACAAAG...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTTGGAGTTGGTTTGCTaGTTCTCTCGGGGAGAAACC +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVLELVC*FSRGET
Trigger: GGTTTCTCCCCGAGAGAAGCAGCAAACCAACTCCAA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACAGAAATTGCTGCTaGCCTTGGAGTTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMHRNCC*PWSWFA
Trigger: AGCAAACCAACTCCAAGGGCAGCAGCAATTTCTGTG...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGAGGATCATGTTGGCCTaGCACCCATCCATGTTCACA +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWRIMLA*HPSMFT
Trigger: TGTGAACATGGATGGGTGGCAGGCCAACATGATCCT...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGACATTCTTATTTCCTGTaGAAGTTATTACGACATCGA +
Preference number: 4 (lower is better)
Translates to: CWEAGCMAWEYISLIFERHSYFL*KLLRHR
Trigger: TCGATGTCGTAATAACTTGCACAGGAAATAAGAATG...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCATTCATGCGATCCAAGTaGTCCCGTGTCACTACATTC +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAFMRSK*SRVTTF
Trigger: GAATGTAGTGACACGGGAGCACTTGGATCGCATGAA...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATGGAGTGGCCCATATTaGATACGATACAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREWSGPY*IRYNCF
Trigger: AAAACAGTTGTATCGTATGCAATATGGGCCACTCCA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATTGGAGTGGCCCATATTaGATACGATACAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHWSGPY*IRYNCF
Trigger: AAAACAGTTGTATCGTATGCAATATGGGCCACTCCA...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCTCCCTGCTAAGAAGCTaGAGGGTGAAAGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMISLLRS*RVKAFL
Trigger: AAGGAAAGCTTTCACCCTGCAGCTTCTTAGCAGGGA...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCTTGTTCTTCCCAAGTTaGTCTCCACATGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMILFFPS*SPHAPS
Trigger: AGAGGGAGCATGTGGAGAGCAACTTGGGAAGAACAA...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGATCAACACCGCTGTCTaGGCTGTGATGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWINTAV*AVMCVQ
Trigger: CTGTACACACATCACAGCCCAGACAGCGGTGTTGAT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTATCAACACCGCTGTCTaGGCTGTGATGTGTGTACAG +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLINTAV*AVMCVQ
Trigger: CTGTACACACATCACAGCCCAGACAGCGGTGTTGAT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCATCAGGCCATCCAAAATaGATTCTCGGCAGCAGTACA +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYASGHPK*ILGSST
Trigger: TGTACTGCTGCCGAGAATCCATTTTGGATGGCCTGA...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTTCTGTGTTGGAGTaGCCCATATTGCATACGATA +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLREISVLE*PILHTI
Trigger: TATCGTATGCAATATGGGCCACTCCAACACAGAAAT...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATATTTCTGTGTTGGAGTaGCCCATATTGCATACGATA +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHISVLE*PILHTI
Trigger: TATCGTATGCAATATGGGCCACTCCAACACAGAAAT...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTAACTCGTTTGCCATCTaGCCAGATGACATGGTCCAC +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLNSFAI*PDDMVH
Trigger: GTGGACCATGTCATCTGGCCAGATGGCAAACGAGTT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGATGGCAGATGCAAGCTaGCAACGTATTCATCCATTT +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRMADAS*QRIHPF
Trigger: AAATGGATGAATACGTTGCCAGCTTGCATCTGCCAT...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGTGGTCCTTGGTAGTATaGTCCATTAGTATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEWSLVV*SISICN
Trigger: ATTACAGATACTAATGGACCATACTACCAAGGACCA...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATTCAGCAGCTAAGAAATaGGCTCTTTTAAGGCGATTT +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHSAAKK*ALLRRF
Trigger: AAATCGCCTTAAAAGAGCCCATTTCTTAGCTGCTGA...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAATCAGCACAAGCTGTATaGTACACAGCTGATAGAATT +
Preference number: 4 (lower is better)
Translates to: ELDIPPLRRKQGLELLRESAQAV*YTADRI
Trigger: AATTCTATCAGCTGTGTACCATACAGCTTGTGCTGA...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCGGTGTTCTGATTGGTTaGTTAAGTGCCCGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSGVLIG*LSARGK
Trigger: TTTTCCTCGGGCACTTAACCAACCAATCAGAACACC...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAATGTGGTGTTCTGATTaGTTGGTTAAGTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAMWCSD*LVKCPR
Trigger: CCTCGGGCACTTAACCAACCAATCAGAACACCACAT...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGAGCACGTTTCCTGAGTaGAATCAGAGCAGACATGTC +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWSTFPE*NQSRHV
Trigger: GACATGTCTGCTCTGATTTCACTCAGGAAACGTGCT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGAGCACGTTTCCTGAGTaGAATCAGAGCAGACATGTC +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWSTFPE*NQSRHV
Trigger: GACATGTCTGCTCTGATTTCACTCAGGAAACGTGCT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCTCATCTAAAGAGCCATaGAGCAAGTTCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMISSKEP*SKFLCG
Trigger: ACCACACAGGAACTTGCTTCATGGCTCTTTAGATGA...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTCACAGAAATTGCTGCTaGCCTTGGAGTTGGTTTGCT +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLHRNCC*PWSWFA
Trigger: AGCAAACCAACTCCAAGGGCAGCAGCAATTTCTGTG...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGTCTTCACACAGAAATTaGTGCTGCCCTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWSSHRN*CCPWSW
Trigger: CCAACTCCAAGGGCAGCAGCAATTTCTGTGTGAAGA...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCATTACGACATCGACTTaGCGGATGACTTCATTTAGC +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSITTST*RMTSFS
Trigger: GCTAAATGAAGTCATCCGGCAAGTCGATGTCGTAAT...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCATTCTTATTTCCTGTaGAAGTTATTACGACATCGA +
Preference number: 4 (lower is better)
Translates to: REINMHHPHLTYLPGRYHHSYFL*KLLRHR
Trigger: TCGATGTCGTAATAACTTGCACAGGAAATAAGAATG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCATACAACTGTTTTTCATaGGATCCAAGTGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAYNCFS*DPSAPV
Trigger: CACGGGAGCACTTGGATCGCATGAAAAACAGTTGTA...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCTACAACTGTTTTTCATaGGATCCAAGTGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIYNCFS*DPSAPV
Trigger: CACGGGAGCACTTGGATCGCATGAAAAACAGTTGTA...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTGTATCGCCCCTCGGGTaGATTATAGAGTTCTATCAG +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLVSPLG*IIEFYQ
Trigger: CTGATAGAACTCTATAATGCACCCGAGGGGCGATAC...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTGTATCGCCCCTCGGGTaGATTATAGAGTTCTATCAG +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVVSPLG*IIEFYQ
Trigger: CTGATAGAACTCTATAATGCACCCGAGGGGCGATAC...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCTCAAATGATGGCAGATaGAAGCTGGCAACGTATTCA +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSSNDGR*KLATYS
Trigger: TGAATACGTTGCCAGCTTGCATCTGCCATCATTTGA...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCAGTTCCTGTGTGGTCTaGAGAACTTGGATAATGAGA +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSSSCVV*RTWIMR
Trigger: TCTCATTATCCAAGTTCTGCAGACCACACAGGAACT...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGGGTAGGTACCATCCCTaGTTCTCTGAAGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMGRYHP*FSEEVK
Trigger: TTTCACTTCTTCAGAGAAGCAGGGATGGTACCTACC...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCGATTGGTTGGTTAAGTaGCCGAGGAAAATAGGCCTT +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIDWLVK*PRKIGL
Trigger: AAGGCCTATTTTCCTCGGGCACTTAACCAACCAATC...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTCAGGCCATCCAAAATaGATTCTCGGCAGCAGTACA +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVSGHPK*ILGSST
Trigger: TGTACTGCTGCCGAGAATCCATTTTGGATGGCCTGA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCCATCGATTTCTGTGTTaGAGTGGCCCATATTGCATA +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSHRFLC*SGPYCI
Trigger: TATGCAATATGGGCCACTCCAACACAGAAATCGATG...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGCAAGTCTGGTGGGAGTaGAGGAAGGGCTATACTATA +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWQVWWE*RKGYTI
Trigger: TATAGTATAGCCCTTCCTCCACTCCCACCAGACTTG...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGCAAGTCTGGTGGGAGTaGAGGAAGGGCTATACTATA +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWQVWWE*RKGYTI
Trigger: TATAGTATAGCCCTTCCTCCACTCCCACCAGACTTG...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTCAAGTCTGGTGGGAGTaGAGGAAGGGCTATACTATA +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVQVWWE*RKGYTI
Trigger: TATAGTATAGCCCTTCCTCCACTCCCACCAGACTTG...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTATGTGGTGTTCTGATTaGTTGGTTAAGTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLMWCSD*LVKCPR
Trigger: CCTCGGGCACTTAACCAACCAATCAGAACACCACAT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGCGCAAATTTAAGGCCTaGCCCTGTCGGGTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWRKFKA*PCRVSK
Trigger: TTTTGAAACCCGACAGGGCCAGGCCTTAAATTTGCG...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR TCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGCATCGACTTGCCGGATaGCTTCATTTAGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWHRLAG*LHLALP
Trigger: TGGTAAAGCTAAATGAAGTCATCCGGCAAGTCGATG...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTCATCGACTTGCCGGATaGCTTCATTTAGCTTTACCA +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLHRLAG*LHLALP
Trigger: TGGTAAAGCTAAATGAAGTCATCCGGCAAGTCGATG...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTCATCTAAAGAGCCATaGAGCAAGTTCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVSSKEP*SKFLCG
Trigger: ACCACACAGGAACTTGCTTCATGGCTCTTTAGATGA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGTCATCTAAAGAGCCATaGAGCAAGTTCCTGTGTGGT +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWSSKEP*SKFLCG
Trigger: ACCACACAGGAACTTGCTTCATGGCTCTTTAGATGA...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCGAAGTGAAAGAGCACTaGTTTCAGCAGCTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSEVKEH*FQQLRN
Trigger: ATTTCTTAGCTGCTGAAATCAGTGCTCTTTCACTTC...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGATCAGTTGCCCTTTATaGTCTCAGTTCATAAACTCT +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRISCPL*SQFINS
Trigger: AGAGTTTATGAACTGAGATCATAAAGGGCAACTGAT...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTCACACAGAAATTGCTaGTGCCCTTGGAGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVSHRNC*CPWSWF
Trigger: AAACCAACTCCAAGGGCAGCAGCAATTTCTGTGTGA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGTACAACTGTTTTTCATaGGATCCAAGTGCTCCCGTG +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWYNCFS*DPSAPV
Trigger: CACGGGAGCACTTGGATCGCATGAAAAACAGTTGTA...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGATAGAGTTCTATCAGTaGCAAAGCCTGTGTTGTGGC +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWIEFYQ*QSLCCG
Trigger: GCCACAACACAGGCTTTGGCACTGATAGAACTCTAT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAAGTTCCTGTGTGGTCTaGAGAACTTGGATAATGAGA +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYASSCVV*RTWIMR
Trigger: TCTCATTATCCAAGTTCTGCAGACCACACAGGAACT...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGGGTAGGTACCATCCCTaGTTCTCTGAAGAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWGRYHP*FSEEVK
Trigger: TTTCACTTCTTCAGAGAAGCAGGGATGGTACCTACC...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATAAAGATAGAACTCAGTaGTTTATACTGAGTAATGGC +
Preference number: 4 (lower is better)
Translates to: RRKQGLELLREINMHHPHKDRTQ*FILSNG
Trigger: GCCATTACTCAGTATAAAGCACTGAGTTCTATCTTT...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAATGGCAGATGCAAGCTaGCAACGTATTCATCCATTT +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAMADAS*QRIHPF
Trigger: AAATGGATGAATACGTTGCCAGCTTGCATCTGCCAT...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTGGTCCTTGGTAGTATaGTCCATTAGTATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: QAMLIIHISELDIPPLRRWSLVV*SISICN
Trigger: ATTACAGATACTAATGGACCATACTACCAAGGACCA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCATCACCTTTCTGGGCTaGGAGAGTAAAATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIITFLG*ESKILL
Trigger: AAGAAGGATTTTACTCTCCCAGCCCAGAAAGGTGAT...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCAAAGAATCACCTTTCTaGGCTGGGAGAGTAAAATCC +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIKESPF*AGRVKS
Trigger: GGATTTTACTCTCCCAGCCCAGAAAGGTGATTCTTT...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCTACACATCTCTGAACTaGACATACCACCTTTACGCA +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIYTSLN*TYHLYA
Trigger: TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTA...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGACAGAGAAGAAAGCATaGTCACACTGGCAAGGAGTA +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWTEKKA*SHWQGV
Trigger: TACTCCTTGCCAGTGTGACCATGCTTTCTTCTCTGT...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
3UTR CAA 72 bp AATTATATACTTAAAGCTCATGAGCATAAAGCTCACTaGACCATGCAGAAATGCTGGGAAGCAGGGTGCATG +
Preference number: 4 (lower is better)
Translates to: NYILKAHEHKAH*TMQKCWEAGCM
Trigger: CATGCACCCTGCTTCCCAGCATTTCTGCATGGTCAAGTGAGCTTTATGCTCATGAGCTTTAAGTATATAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACAAATTCTGCCTGCTTaGTGTTCTTCACACAGAAAT +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAQILPA*CSSHRN
Trigger: ATTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCAAATTCTGCCTGCTTaGTGTTCTTCACACAGAAAT +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMQILPA*CSSHRN
Trigger: ATTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTG...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCATGGCCCATTTTTGTTaGGTCCCAGATATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIMAHFC*VPDILL
Trigger: AAGCAAAATATCTGGGACTCAACAAAAATGGGCCAT...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCGAAGTGAAAGAGCACTaGTTTCAGCAGCTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIEVKEH*FQQLRN
Trigger: ATTTCTTAGCTGCTGAAATCAGTGCTCTTTCACTTC...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGAAGTGAAAGAGCACTaGTTTCAGCAGCTAAGAAAT +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAEVKEH*FQQLRN
Trigger: ATTTCTTAGCTGCTGAAATCAGTGCTCTTTCACTTC...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCCATTATACACATCTCTaGACTGGACATACCACCTTT +
Preference number: 4 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIHYTHL*TGHTTF
Trigger: AAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATG...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCCTCAGTGCTTTATACTaGGTAATGGCTCAAGAAATT +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSLSALY*VMAQEI
Trigger: AATTTCTTGAGCCATTACTCAGTATAAAGCACTGAG...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCCAAGCTAGAACAAGTTaGGGATTTAAAATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSQARTS*GFKILD
Trigger: ATCCAGGATTTTAAATCCTCAACTTGTTCTAGCTTG...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGATTACGACATCGACTTaGCGGATGACTTCATTTAGC +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWITTST*RMTSFS
Trigger: GCTAAATGAAGTCATCCGGCAAGTCGATGTCGTAAT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGTGGAGTGGCCCATATTaGATACGATACAACTGTTTT +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMWSGPY*IRYNCF
Trigger: AAAACAGTTGTATCGTATGCAATATGGGCCACTCCA...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAGGCGATTTAGACATTaGAGATTGTTCCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: IPPLRRKQGLELLREINMRRFRH*RLFHRE
Trigger: TTCTCTGTGGAACAATCTGCAATGTCTAAATCGCCT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTACAGCTGATAGAATTTaGTGTTGTGGCTCCAGTTCA +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLTADRI*CCGSSS
Trigger: TGAACTGGAGCCACAACAGCAAATTCTATCAGCTGT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGATCACCTTTCTGGGCTaGGAGAGTAAAATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWITFLG*ESKILL
Trigger: AAGAAGGATTTTACTCTCCCAGCCCAGAAAGGTGAT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGATCACCTTTCTGGGCTaGGAGAGTAAAATCCTTCTT +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWITFLG*ESKILL
Trigger: AAGAAGGATTTTACTCTCCCAGCCCAGAAAGGTGAT...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCATCAGCAGCTAAGAAATaGGCTCTTTTAAGGCGATTT +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYASAAKK*ALLRRF
Trigger: AAATCGCCTTAAAAGAGCCCATTTCTTAGCTGCTGA...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCATCAGCACAAGCTGTATaGTACACAGCTGATAGAATT +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYASAQAV*YTADRI
Trigger: AATTCTATCAGCTGTGTACCATACAGCTTGTGCTGA...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGATGGCCCATTTTTGTTaGGTCCCAGATATTTTGCTT +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWMAHFC*VPDILL
Trigger: AAGCAAAATATCTGGGACTCAACAAAAATGGGCCAT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTCATTATACACATCTCTaGACTGGACATACCACCTTT +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLHYTHL*TGHTTF
Trigger: AAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATG...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCTCAGCAAACTGGATTTaGAGAAAACAACTTATCTCA +
Preference number: 4 (lower is better)
Translates to: NISLECVVQVDWSLVVWSSANWI*RKQLIS
Trigger: TGAGATAAGTTGTTTTCTGCAAATCCAGTTTGCTGA...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS-3UTR GCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGAGGCGATTTAGACATTaGAGATTGTTCCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWRRFRH*RLFHRE
Trigger: TTCTCTGTGGAACAATCTGCAATGTCTAAATCGCCT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGATTTCTGTGTTGGAGTaGCCCATATTGCATACGATA +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWISVLE*PILHTI
Trigger: TATCGTATGCAATATGGGCCACTCCAACACAGAAAT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCATGGTCCTTGGTAGTATaGTCCATTAGTATCTGTAAT +
Preference number: 4 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAWSLVV*SISICN
Trigger: ATTACAGATACTAATGGACCATACTACCAAGGACCA...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
3UTR CAA 72 bp AGCCAGGATGTACTGACTACTTTCTTCACACATCAGTaGCCCTTTATGATCTCAGTTCATAAACTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SQDVLTTFFTHQ*PFMISVHKLFV
Trigger: CACAAAGAGTTTATGAACTGAGATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGATCAGTTGCCCTTTATaGTCTCAGTTCATAAACTCT +
Preference number: 4 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWISCPL*SQFINS
Trigger: AGAGTTTATGAACTGAGATCATAAAGGGCAACTGAT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR TCA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGCAAGCTAGAACAAGTTaGGGATTTAAAATCCTGGAT +
Preference number: 4 (lower is better)
Translates to: IKTKVPRNGKERITFLGWQARTS*GFKILD
Trigger: ATCCAGGATTTTAAATCCTCAACTTGTTCTAGCTTG...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTCATTCTTATTTCCTGTaGAAGTTATTACGACATCGA +
Preference number: 4 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVHSYFL*KLLRHR
Trigger: TCGATGTCGTAATAACTTGCACAGGAAATAAGAATG...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR GCA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGAAAGATAGAACTCAGTaGTTTATACTGAGTAATGGC +
Preference number: 4 (lower is better)
Translates to: SISLDSASLAPKVQKRNWKDRTQ*FILSNG
Trigger: GCCATTACTCAGTATAAAGCACTGAGTTCTATCTTT...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CCA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTATGTCATCAGCAAACTaGATTTGCAGAAAACAACTT +
Preference number: 4 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLMSSAN*ICRKQL
Trigger: AAGTTGTTTTCTGCAAATCCAGTTTGCTGATGACAT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS GCA 90 bp CGCCTGCCCGCGCGGCGCCCTCCGACACGCGATCGCCCACCCTCCTaGCGGCCCCTGCGTCGAGCTGCGTCGGCTTCTGAGGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RLPARRPPTRDRPPS*RPLRRAASASEVLW
Trigger: CCACAGCACCTCAGAAGCCGACGCAGCTCGACGCAGGGGCCGGCAGGAGGGTGGGCGATCGCGTGTCGGAGGGCGCCGCGCGGGCAGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS GCA 90 bp CACCCTCCTGCCGGCCCCTGCGTCGAGCTGCGTCGGCTTCTGAGGTaGTGTGGCCCACGCCTTGTCTGTTCGGCAGCCCAAGGCAGCCGG +
Preference number: 5 (lower is better)
Translates to: HPPAGPCVELRRLLR*CGPRLVCSAAQGSR
Trigger: CCGGCTGCCTTGGGCTGCCGAACAGACAAGGCGTGGGCCACAGCACCTCAGAAGCCGACGCAGCTCGACGCAGGGGCCGGCAGGAGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS TCA 90 bp TCGCCCACCCTCCTGCCGGCCCCTGCGTCGAGCTGCGTCGGCTTCTaGGGTGCTGTGGCCCACGCCTTGTCTGTTCGGCAGCCCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SPTLLPAPASSCVGF*GAVAHALSVRQPKA
Trigger: TGCCTTGGGCTGCCGAACAGACAAGGCGTGGGCCACAGCACCTCAGAAGCCGACGCAGCTCGACGCAGGGGCCGGCAGGAGGGTGGGCGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS CCA 90 bp TCCTGCCGGCCCCTGCGTCGAGCTGCGTCGGCTTCTGAGGTGCTGTaGCCCACGCCTTGTCTGTTCGGCAGCCCAAGGCAGCCGGACAGC +
Preference number: 5 (lower is better)
Translates to: SCRPLRRAASASEVL*PTPCLFGSPRQPDS
Trigger: GCTGTCCGGCTGCCTTGGGCTGCCGAACAGACAAGGCGTGGGCCACAGCACCTCAGAAGCCGACGCAGCTCGACGCAGGGGCCGGCAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS CCA 90 bp AAAGGAAAGCGAGGTCAGAGGCGGCCTTTCAGCCCGGGAGAGGCCTaGGGCCGCACAGCCGCCACCCCCTACATCACCTCCGCCGTCCCC +
Preference number: 5 (lower is better)
Translates to: KGKRGQRRPFSPGEA*GRTAATPYITSAVP
Trigger: GGGGACGGCGGAGGTGATGTAGGGGGTGGCGGCTGTGCGGCCCCAGGCCTCTCCCGGGCTGAAAGGCCGCCTCTGACCTCGCTTTCCTTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS GCA 90 bp GTGGCCATGAAGGAGTACTTCTCGGCGTCCTCGATCTCCTTGGCCTaGTTCAGCTCCTCCCCGACCCCGGGCAGCGGCATCGCGTCAGGC +
Preference number: 5 (lower is better)
Translates to: VAMKEYFSASSISLA*FSSSPTPGSGIASG
Trigger: GCCTGACGCGATGCCGCTGCCCGGGGTCGGGGAGGAGCTGAAGCAGGCCAAGGAGATCGAGGACGCCGAGAAGTACTCCTTCATGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS CCA 90 bp TTTAAGGCCTGGCCCTGTCGGGTTTCAAAACGATCCCGGAGGACTTaGGCCGAGGGACAAAGGAAAGCGAGGTCAGAGGCGGCCTTTCAG +
Preference number: 5 (lower is better)
Translates to: FKAWPCRVSKRSRRT*AEGQRKARSEAAFQ
Trigger: CTGAAAGGCCGCCTCTGACCTCGCTTTCCTTTGTCCCTCGGCCCAAGTCCTCCGGGATCGTTTTGAAACCCGACAGGGCCAGGCCTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS TCA 90 bp TGCAACTCCAGCCTCAGCCAGTGCTGCAGCTACTTCATTCTGAGTTaGGTAGATGTTACAAGCAGACCAGCGGCACTGAGCCCCCAGGGC +
Preference number: 5 (lower is better)
Translates to: CNSSLSQCCSYFILS*VDVTSRPAALSPQG
Trigger: GCCCTGGGGGCTCAGTGCCGCTGGTCTGCTTGTAACATCTACTCAACTCAGAATGAAGTAGCTGCAGCACTGGCTGAGGCTGGAGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS CCA 90 bp TTCGAGGCCCTTCATCCAGGAAAAGTCAGTCGCAAATTTAAGGCCTaGCCCTGTCGGGTTTCAAAACGATCCCGGAGGACTTGGGCCGAG +
Preference number: 5 (lower is better)
Translates to: FEALHPGKVSRKFKA*PCRVSKRSRRTWAE
Trigger: CTCGGCCCAAGTCCTCCGGGATCGTTTTGAAACCCGACAGGGCCAGGCCTTAAATTTGCGACTGACTTTTCCTGGATGAAGGGCCTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR CAA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCAGCCAGAGCCCGGGCTaGCTCGCGTCCCTTCCGCGA +
Preference number: 5 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMISQSPG*LASLPR
Trigger: TCGCGGAAGGGACGCGAGCAAGCCCGGGCTCTGGCT...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS TCA 90 bp ACCTCCAGTCACTTCTTCCATTCCCTTGTGCAGAAACCAGTCTTCTaGGACTTAGCAGGTTTTGGCTGCTCCCGGCTCTCCTTCCCTGTC +
Preference number: 5 (lower is better)
Translates to: TSSHFFHSLVQKPVF*DLAGFGCSRLSFPV
Trigger: GACAGGGAAGGAGAGCCGGGAGCAGCCAAAACCTGCTAAGTCTCAGAAGACTGGTTTCTGCACAAGGGAATGGAAGAAGTGACTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS-3UTR CAA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATGCCCTTGGAGTTGGTTaGCTGCTTCTCTCGGGGAGA +
Preference number: 5 (lower is better)
Translates to: REINMHHPHLTYLPGRYHALGVG*LLLSGR
Trigger: TCTCCCCGAGAGAAGCAGCAAACCAACTCCAAGGGC...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGGCCCTTGGAGTTGGTTaGCTGCTTCTCTCGGGGAGA +
Preference number: 5 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEALGVG*LLLSGR
Trigger: TCTCCCCGAGAGAAGCAGCAAACCAACTCCAAGGGC...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATGCCCTTGGAGTTGGTTaGCTGCTTCTCTCGGGGAGA +
Preference number: 5 (lower is better)
Translates to: RRKQGLELLREINMHHPHALGVG*LLLSGR
Trigger: TCTCCCCGAGAGAAGCAGCAAACCAACTCCAAGGGC...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATGTGGAGCAGCTCAAATaGAGTAGACGACCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: REINMHHPHLTYLPGRYHVEQLK*SRRPSA
Trigger: GGCAGAGGGTCGTCTACTCAATTTGAGCTGCTCCAC...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAGTGATGGATACACTGTaGGCCAGGTTACCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: CWEAGCMAWEYISLIFERVMDTL*ARLPPL
Trigger: TAGGGGAGGTAACCTGGCCAACAGTGTATCCATCAC...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTAGCCCCCGCACCTTCTaGGGCGCCTTGGTGACGGTG +
Preference number: 5 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLSPRTF*GALVTV
Trigger: CACCGTCACCAAGGCGCCCAAGAAGGTGCGGGGGCT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS TCA 90 bp TGTGTACAGCCCACTATTTTAGCACCAGCCAAGGGCTTCTCCCCCTaGGCACGTTTCCTGAGTGAAATCAGAGCAGACATGTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: CVQPTILAPAKGFSP*ARFLSEIRADMSCS
Trigger: AGAGCAAGACATGTCTGCTCTGATTTCACTCAGGAAACGTGCTCAGGGGGAGAAGCCCTTGGCTGGTGCTAAAATAGTGGGCTGTACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS CCA 90 bp AAAGGTAAGAGAGAGCCCTGGGATGAGCTCTGTCTCAGATTCCAATaGCATACAAGTCAAGCCAAAGCGGGAGAGGACTTTACACCCCTC +
Preference number: 5 (lower is better)
Translates to: KGKREPWDELCLRFQ*HTSQAKAGEDFTPL
Trigger: GAGGGGTGTAAAGTCCTCTCCCGCTTTGGCTTGACTTGTATGCCATTGGAATCTGAGACAGAGCTCATCCCAGGGCTCTCTCTTACCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469401.1
CDS-3UTR CAA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATAGGAGGACAACTCGTTaGCCATCTGGCCAGATGACA +
Preference number: 5 (lower is better)
Translates to: REINMHHPHLTYLPGRYHRRTTR*PSGQMT
Trigger: TGTCATCTGGCCAGATGGCAAACGAGTTGTCCTCCT...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAAAGTACACATCCTGCTaGTATCGCCCCTCGGGTGCA +
Preference number: 5 (lower is better)
Translates to: ELDIPPLRRKQGLELLREKYTSC*YRPSGA
Trigger: TGCACCCGAGGGGCGATACAAGCAGGATGTGTACTT...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTGCTGTGGCCCACGCCTaGTCTGTTCGGCAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVAVAHA*SVRQPK
Trigger: CTTGGGCTGCCGAACAGACAAGGCGTGGGCCACAGC...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGGCTGTGGCCCACGCCTaGTCTGTTCGGCAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: IKTKVPRNGKERITFLGWAVAHA*SVRQPK
Trigger: CTTGGGCTGCCGAACAGACAAGGCGTGGGCCACAGC...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCGCGTCCTCGATCTCCTaGGCCTGCTTCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIASSIS*ACFSSS
Trigger: GGAGGAGCTGAAGCAGGCCAAGGAGATCGAGGACGC...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS CCA 90 bp CCATTCCCTTGTGCAGAAACCAGTCTTCTGAGACTTAGCAGGTTTTaGCTGCTCCCGGCTCTCCTTCCCTGTCTCAAGTTTCTTAAGTTC +
Preference number: 5 (lower is better)
Translates to: PFPCAETSLLRLSRF*LLPALLPCLKFLKF
Trigger: GAACTTAAGAAACTTGAGACAGGGAAGGAGAGCCGGGAGCAGCCAAAACCTGCTAAGTCTCAGAAGACTGGTTTCTGCACAAGGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS CCA 90 bp CAGCTCAAATTGAGTAGACGACCCTGGAAAGGTAAGAGAGAGCCCTaGGATGAGCTCTGTCTCAGATTCCAATGGCATACAAGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: QLKLSRRPWKGKREP*DELCLRFQWHTSQA
Trigger: GGCTTGACTTGTATGCCATTGGAATCTGAGACAGAGCTCATCCCAGGGCTCTCTCTTACCTTTCCAGGGTCGTCTACTCAATTTGAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469401.1
CDS-3UTR CAA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTCATCCAGGATCATGTaGGCCTGCCACCCATCCATG +
Preference number: 5 (lower is better)
Translates to: QAMLIIHISELDIPPLRRSSRIM*ACHPSM
Trigger: CATGGATGGGTGGCAGGCCAACATGATCCTGGATGA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCAGGTGGACTGGTCCTaGGTAGTATGGTCCATTAGT +
Preference number: 5 (lower is better)
Translates to: REINMHHPHLTYLPGRYHQVDWS*VVWSIS
Trigger: ACTAATGGACCATACTACCAAGGACCAGTCCACCTG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGGCGTCCTCGATCTCCTaGGCCTGCTTCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SISLDSASLAPKVQKRNWASSIS*ACFSSS
Trigger: GGAGGAGCTGAAGCAGGCCAAGGAGATCGAGGACGC...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACAAGGGTCAGCTGAGTaGGTTCACCCCCTCCCACTC +
Preference number: 5 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAQGSAE*VHPLPL
Trigger: GAGTGGGAGGGGGTGAACCAACTCAGCTGACCCTTG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS TCA 90 bp CTTGCTCTGCAATCTCAATCTCCCGGCGTCCAAATTCTGCCTGCTTaGTGTTCTTCACACAGAAATTGCTGCTGCCCTTGGAGTTGGTTT +
Preference number: 5 (lower is better)
Translates to: LALQSQSPGVQILPA*CSSHRNCCCPWSWF
Trigger: AAACCAACTCCAAGGGCAGCAGCAATTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTGGACGCCGGGAGATTGAGATTGCAGAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS-3UTR CAA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAACAGGTGGACTGGTCCTaGGTAGTATGGTCCATTAGT +
Preference number: 5 (lower is better)
Translates to: ELDIPPLRRKQGLELLREQVDWS*VVWSIS
Trigger: ACTAATGGACCATACTACCAAGGACCAGTCCACCTG...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTGCTTCTTGGGCGCCTaGGTGACGGTGGCCATGAAG +
Preference number: 5 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVCFLGA*VTVAMK
Trigger: CTTCATGGCCACCGTCACCAAGGCGCCCAAGAAGCA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369799.10
CDS-3UTR CAA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGAGTTTTGGCAAGACAATaGTTCCCTGCTAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: CWEAGCMAWEYISLIFERVLARQ*FPAKKL
Trigger: CAGCTTCTTAGCAGGGAACAATTGTCTTGCCAAAAC...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGTGGTGTTCTGATTGGTaGGTTAAGTGCCCGAGGAAA +
Preference number: 5 (lower is better)
Translates to: KCWEAGCMAWEYISLIFEWCSDW*VKCPRK
Trigger: TTTCCTCGGGCACTTAACCAACCAATCAGAACACCA...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTACCTTCTTGGGCGCCTaGGTGACGGTGGCCATGAAG +
Preference number: 5 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLTFLGA*VTVAMK
Trigger: CTTCATGGCCACCGTCACCAAGGCGCCCAAGAAGGT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR CAA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGACGATCCCGGAGGACTaGGGCCGAGGGACAAAGGAA +
Preference number: 5 (lower is better)
Translates to: IKTKVPRNGKERITFLGWTIPED*GRGTKE
Trigger: TTCCTTTGTCCCTCGGCCCAAGTCCTCCGGGATCGT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR CAA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAGTTTTGGTGGGGAATTaGGTGAACTCCTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: ELDIPPLRRKQGLELLREVLVGN*VNSCMS
Trigger: TGACATGCAGGAGTTCACCAAATTCCCCACCAAAAC...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AAATGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGTTGGTAACAGAATCATaGACGTTCATGGCCGGAACA +
Preference number: 5 (lower is better)
Translates to: KCWEAGCMAWEYISLIFELVTES*TFMAGT
Trigger: TGTTCCGGCCATGAACGTCAATGATTCTGTTACCAA...CTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp TGCTGGGAAGCAGGGTGCATGGCATGGGAATACATCTCCCTGATCTTTGAGAGATTGGAGTGGCCCATATaGCATACGATACAACTGTTT +
Preference number: 5 (lower is better)
Translates to: CWEAGCMAWEYISLIFERLEWPI*HTIQLF
Trigger: AAACAGTTGTATCGTATGCAATATGGGCCACTCCAA...TCTCTCAAAGATCAGGGAGATGTATTCCCATGCCATGCACCCTGCTTCCCAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGTGGAGCAGCTCAAATaGAGTAGACGACCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAVEQLK*SRRPSA
Trigger: GGCAGAGGGTCGTCTACTCAATTTGAGCTGCTCCAC...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAAGTACACATCCTGCTaGTATCGCCCCTCGGGTGCA +
Preference number: 5 (lower is better)
Translates to: IPPLRRKQGLELLREINMKYTSC*YRPSGA
Trigger: TGCACCCGAGGGGCGATACAAGCAGGATGTGTACTT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS GCA 90 bp GTTCTATCAGTGCCAAAGCCTGTGCAAGTTATTACGACATCGACTTaGCGGATGACTTCATTTAGCTTTACCACCCTGAACCCATCCATG +
Preference number: 5 (lower is better)
Translates to: VLSVPKPVQVITTST*RMTSFSFTTLNPSM
Trigger: CATGGATGGGTTCAGGGTGGTAAAGCTAAATGAAGTCATCCGGCAAGTCGATGTCGTAATAACTTGCACAGGCTTTGGCACTGATAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481423.1
CDS-3UTR CAA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATCCAAATTCTGCCTGCTaGATGTTCTTCACACAGAAA +
Preference number: 5 (lower is better)
Translates to: REINMHHPHLTYLPGRYHPNSAC*MFFTQK
Trigger: TTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTGG...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGCAGAGCAGACATGTCTaGCTCTGCAATCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: QAMLIIHISELDIPPLRRQSRHV*LCNLNL
Trigger: GAGATTGAGATTGCAGAGCAAGACATGTCTGCTCTG...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTTCATCCAGGATCATGTaGGCCTGCCACCCATCCATG +
Preference number: 5 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVSSRIM*ACHPSM
Trigger: CATGGATGGGTGGCAGGCCAACATGATCCTGGATGA...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTCATCCAGGATCATGTaGGCCTGCCACCCATCCATG +
Preference number: 5 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLSSRIM*ACHPSM
Trigger: CATGGATGGGTGGCAGGCCAACATGATCCTGGATGA...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAAGGAGGACAACTCGTTaGCCATCTGGCCAGATGACA +
Preference number: 5 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYARRTTR*PSGQMT
Trigger: TGTCATCTGGCCAGATGGCAAACGAGTTGTCCTCCT...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGAGGAGGACAACTCGTTaGCCATCTGGCCAGATGACA +
Preference number: 5 (lower is better)
Translates to: IPPLRRKQGLELLREINMRRTTR*PSGQMT
Trigger: TGTCATCTGGCCAGATGGCAAACGAGTTGTCCTCCT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGGTGGAGCAGCTCAAATaGAGTAGACGACCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWVEQLK*SRRPSA
Trigger: GGCAGAGGGTCGTCTACTCAATTTGAGCTGCTCCAC...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGAAGTACACATCCTGCTaGTATCGCCCCTCGGGTGCA +
Preference number: 5 (lower is better)
Translates to: IKTKVPRNGKERITFLGWKYTSC*YRPSGA
Trigger: TGCACCCGAGGGGCGATACAAGCAGGATGTGTACTT...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGAACTGGATTTGCTTCTaGGGCGCCTTGGTGACGGTG +
Preference number: 5 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWNWICF*GALVTV
Trigger: CACCGTCACCAAGGCGCCCAAGAAGCAAATCCAGTT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369799.10
CDS-3UTR CAA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACTTGTTCTTCCCAAGTaGCTCTCCACATGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYALVLPK*LSTCSL
Trigger: GAGGGAGCATGTGGAGAGCAACTTGGGAAGAACAAG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCCTTGTTCTTCCCAAGTaGCTCTCCACATGCTCCCTC +
Preference number: 5 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMILVLPK*LSTCSL
Trigger: GAGGGAGCATGTGGAGAGCAACTTGGGAAGAACAAG...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCAGGTGGACTGGTCCTaGGTAGTATGGTCCATTAGT +
Preference number: 5 (lower is better)
Translates to: IPPLRRKQGLELLREINMQVDWS*VVWSIS
Trigger: ACTAATGGACCATACTACCAAGGACCAGTCCACCTG...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCCGCAGGAAACAGGGCTaGGAACTTCTAAGGGAAATT +
Preference number: 5 (lower is better)
Translates to: NISLECVVQVDWSLVVWSRRKQG*ELLREI
Trigger: AATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AGGGAAATTAACATGCACCACCCACATCTAACCTACCTGCCGGGTAGGTACCATTTCTTCACACATCAGTaGCCCTTTATGATCTCAGTT +
Preference number: 5 (lower is better)
Translates to: REINMHHPHLTYLPGRYHFFTHQ*PFMISV
Trigger: AACTGAGATCATAAAGGGCAACTGATGTGTGAAGAA...ATGGTACCTACCCGGCAGGTAGGTTAGATGTGGGTGGTGCATGTTAATTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTGTGATGGATACACTGTaGGCCAGGTTACCTCCCCTA +
Preference number: 5 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVVMDTL*ARLPPL
Trigger: TAGGGGAGGTAACCTGGCCAACAGTGTATCCATCAC...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp GAACTGGACATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATCAGCAAACTGGATTaGCTGAAGGGAGATTTTCTG +
Preference number: 5 (lower is better)
Translates to: ELDIPPLRRKQGLELLREISKLD*LKGDFL
Trigger: CAGAAAATCTCCCTTCAGCAAATCCAGTTTGCTGAT...TTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTATGTCCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS-3UTR CAA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTGATCTTCGGCCAGTTTaGGTGGGGAATTTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLDLRPV*VGNLVN
Trigger: GTTCACCAAATTCCCCACCAAAACTGGCCGAAGATC...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACAGAGCAGACATGTCTaGCTCTGCAATCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAQSRHV*LCNLNL
Trigger: GAGATTGAGATTGCAGAGCAAGACATGTCTGCTCTG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCTTGGTAACAGAATCATaGACGTTCATGGCCGGAACA +
Preference number: 5 (lower is better)
Translates to: NISLECVVQVDWSLVVWSLVTES*TFMAGT
Trigger: TGTTCCGGCCATGAACGTCAATGATTCTGTTACCAA...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGATCAGCAAACTGGATTaGCTTCTTGGGCGCCTTGGT +
Preference number: 5 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWISKLD*LLGRLG
Trigger: ACCAAGGCGCCCAAGAAGCAAATCCAGTTTGCTGAT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369799.10
CDS-3UTR CAA 90 bp AATATTTCTTTAGAGTGTGTGGTTCAGGTGGACTGGTCCTTGGTAGTATGGTCCACGTATGACCCAACTTaGAGGGATCACAAGCTAGAA +
Preference number: 5 (lower is better)
Translates to: NISLECVVQVDWSLVVWSTYDPT*RDHKLE
Trigger: TTCTAGCTTGTGATCCCTCAAAGTTGGGTCATACGT...GGACCATACTACCAAGGACCAGTCCACCTGAACCACACACTCTAAAGAAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS GCA 90 bp GTCACTACATTCTTATTTCCTGTGCAAGTTATTACGACATCGACTTaGCGGATGACTTCATTTAGCTTTACCACCCTGAACCCATCCATG +
Preference number: 5 (lower is better)
Translates to: VTTFLFPVQVITTST*RMTSFSFTTLNPSM
Trigger: CATGGATGGGTTCAGGGTGGTAAAGCTAAATGAAGTCATCCGGCAAGTCGATGTCGTAATAACTTGCACAGGAAATAAGAATGTAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGGTTTTGGTGGGGAATTaGGTGAACTCCTGCATGTCA +
Preference number: 5 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWVLVGN*VNSCMS
Trigger: TGACATGCAGGAGTTCACCAAATTCCCCACCAAAAC...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTTCTTCACACAGAAATaGCTGCTGCCCTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLFFTQK*LLPLEL
Trigger: CAACTCCAAGGGCAGCAGCAATTTCTGTGTGAAGAA...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGTTCTTCACACAGAAATaGCTGCTGCCCTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: IKTKVPRNGKERITFLGWFFTQK*LLPLEL
Trigger: CAACTCCAAGGGCAGCAGCAATTTCTGTGTGAAGAA...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGCAGAGCAGACATGTCTaGCTCTGCAATCTCAATCTC +
Preference number: 5 (lower is better)
Translates to: SISLDSASLAPKVQKRNWQSRHV*LCNLNL
Trigger: GAGATTGAGATTGCAGAGCAAGACATGTCTGCTCTG...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGACATCGATTTCTGTGTaGGAGTGGCCCATATTGCAT +
Preference number: 5 (lower is better)
Translates to: IPPLRRKQGLELLREINMTSISV*EWPILH
Trigger: ATGCAATATGGGCCACTCCAACACAGAAATCGATGT...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGCGCAGGAAACAGGGCTaGGAACTTCTAAGGGAAATT +
Preference number: 5 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWRRKQG*ELLREI
Trigger: AATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGCACCACCCACATCAGCTGACCAGAAATTaGCTCTTAAAGATAAATCCT +
Preference number: 5 (lower is better)
Translates to: RRKQGLELLREINMHHPHQLTRN*LLKINP
Trigger: AGGATTTATCTTTAAGAGCAAATTTCTGGTCAGCTG...ATGTGGGTGGTGCATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGGTTCTTCACACATCAGTaGCCCTTTATGATCTCAGTT +
Preference number: 5 (lower is better)
Translates to: QAMLIIHISELDIPPLRRFFTHQ*PFMISV
Trigger: AACTGAGATCATAAAGGGCAACTGATGTGTGAAGAA...CCTGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCAGTTTTGGCAAGACAATaGTTCCCTGCTAAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAVLARQ*FPAKKL
Trigger: CAGCTTCTTAGCAGGGAACAATTGTCTTGCCAAAAC...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS GCA 90 bp TGGCCCATATTGCATACGATACAACTGTTTTTCATGCGATCCAAGTaGTCCCGTGTCACTACATTCTTATTTCCTGTGCAAGTTATTACG +
Preference number: 5 (lower is better)
Translates to: WPILHTIQLFFMRSK*SRVTTFLFPVQVIT
Trigger: CGTAATAACTTGCACAGGAAATAAGAATGTAGTGACACGGGAGCACTTGGATCGCATGAAAAACAGTTGTATCGTATGCAATATGGGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp CGATTTAGACATTGCAGATTGTTCCACAGAGAAGGTACCTTAGCATTTCCTGTTACTTCTTCCATTCCCTaGTGCAGAAACCAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: RFRHCRLFHREGTLAFPVTSSIP*CRNQSS
Trigger: AGAAGACTGGTTTCTGCACAAGGGAATGGAAGAAGT...AACAGGAAATGCTAAGGTACCTTCTCTGTGGAACAATCTGCAATGTCTAAATCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS-3UTR CAA 90 bp ATGAGCCAGGATGTACTGACTACTTTCTTCACACATCAGTTGCCCTTTATGATCCCAAATTCTGCCTGCTaGATGTTCTTCACACAGAAA +
Preference number: 5 (lower is better)
Translates to: MSQDVLTTFFTHQLPFMIPNSAC*MFFTQK
Trigger: TTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTGG...GATCATAAAGGGCAACTGATGTGTGAAGAAAGTAGTCAGTACATCCTGGCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp AACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTACGCACCAAATTCTGCCTGCTaGATGTTCTTCACACAGAAA +
Preference number: 5 (lower is better)
Translates to: NKPCSLYTSLNWTYHLYAPNSAC*MFFTQK
Trigger: TTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTGG...TGCGTAAAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATTAAGACTAAAGTCCCCAGAAATGGTAAAGAAAGAATCACCTTTCTGGGCTGGTTGGTAACAGAATCATaGACGTTCATGGCCGGAACA +
Preference number: 5 (lower is better)
Translates to: IKTKVPRNGKERITFLGWLVTES*TFMAGT
Trigger: TGTTCCGGCCATGAACGTCAATGATTCTGTTACCAA...CCAGCCCAGAAAGGTGATTCTTTCTTTACCATTTCTGGGGACTTTAGTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATACCACCTTTACGCAGGAAACAGGGCTTGGAACTTCTAAGGGAAATTAACATGTTGGAGTGGCCCATATaGCATACGATACAACTGTTT +
Preference number: 5 (lower is better)
Translates to: IPPLRRKQGLELLREINMLEWPI*HTIQLF
Trigger: AAACAGTTGTATCGTATGCAATATGGGCCACTCCAA...CATGTTAATTTCCCTTAGAAGTTCCAAGCCCTGTTTCCTGCGTAAAGGTGGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGACATCGATTTCTGTGTaGGAGTGGCCCATATTGCAT +
Preference number: 5 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWTSISV*EWPILH
Trigger: ATGCAATATGGGCCACTCCAACACAGAAATCGATGT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTACATCGATTTCTGTGTaGGAGTGGCCCATATTGCAT +
Preference number: 5 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLTSISV*EWPILH
Trigger: ATGCAATATGGGCCACTCCAACACAGAAATCGATGT...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGACGTATGACCCAACTTaGAGGGATCACAAGCTAGAA +
Preference number: 5 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWTYDPT*RDHKLE
Trigger: TTCTAGCTTGTGATCCCTCAAAGTTGGGTCATACGT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp GATCTTAACAAGCCATGCTCATTATACACATCTCTGAACTGGACATACCACCTTTTGGAGTGGCCCATATaGCATACGATACAACTGTTT +
Preference number: 5 (lower is better)
Translates to: DLNKPCSLYTSLNWTYHLLEWPI*HTIQLF
Trigger: AAACAGTTGTATCGTATGCAATATGGGCCACTCCAA...AAGGTGGTATGTCCAGTTCAGAGATGTGTATAATGAGCATGGCTTGTTAAGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS-3UTR CAA 90 bp ATAGAGTGTAGTCTAGTTAAAAACTCGAAAAATGAGCAAGTCTGGTGGGAGTGGATCAGCAAACTGGATTaGCAGAAAACAACTTATCTC +
Preference number: 5 (lower is better)
Translates to: IECSLVKNSKNEQVWWEWISKLD*QKTTYL
Trigger: GAGATAAGTTGTTTTCTGCAAATCCAGTTTGCTGAT...CCACTCCCACCAGACTTGCTCATTTTTCGAGTTTTTAACTAGACTACACTCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS-3UTR CAA 90 bp AGCATTTCTCTAGACTCAGCATCCTTAGCTCCAAAGGTTCAAAAGAGAAATTGGCAGCTGACCAGAAATTaGCTCTTAAAGATAAATCCT +
Preference number: 5 (lower is better)
Translates to: SISLDSASLAPKVQKRNWQLTRN*LLKINP
Trigger: AGGATTTATCTTTAAGAGCAAATTTCTGGTCAGCTG...CCAATTTCTCTTTTGAACCTTTGGAGCTAAGGATGCTGAGTCTAGAGAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS GCA 72 bp GCGCGGCGCCCTCCGACACGCGATCGCCCACCCTCCTaGCGGCCCCTGCGTCGAGCTGCGTCGGCTTCTGAG +
Preference number: 6 (lower is better)
Translates to: ARRPPTRDRPPS*RPLRRAASASE
Trigger: CTCAGAAGCCGACGCAGCTCGACGCAGGGGCCGGCAGGAGGGTGGGCGATCGCGTGTCGGAGGGCGCCGCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS CCA 72 bp CGAGGTCAGAGGCGGCCTTTCAGCCCGGGAGAGGCCTaGGGCCGCACAGCCGCCACCCCCTACATCACCTCC +
Preference number: 6 (lower is better)
Translates to: RGQRRPFSPGEA*GRTAATPYITS
Trigger: GGAGGTGATGTAGGGGGTGGCGGCTGTGCGGCCCCAGGCCTCTCCCGGGCTGAAAGGCCGCCTCTGACCTCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS CAA 90 bp CGAGCCCCCGCCGCCACCCAGAGCCCCCGCACCTTCTTGGGCGCCTaGGTGACGGTGGCCATGAAGGAGTACTTCTCGGCGTCCTCGATC +
Preference number: 6 (lower is better)
Translates to: RAPAATQSPRTFLGA*VTVAMKEYFSASSI
Trigger: GATCGAGGACGCCGAGAAGTACTCCTTCATGGCCACCGTCACCAAGGCGCCCAAGAAGGTGCGGGGGCTCTGGGTGGCGGCGGGGGCTCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS TCA 72 bp CTCCTGCCGGCCCCTGCGTCGAGCTGCGTCGGCTTCTaGGGTGCTGTGGCCCACGCCTTGTCTGTTCGGCAG +
Preference number: 6 (lower is better)
Translates to: LLPAPASSCVGF*GAVAHALSVRQ
Trigger: CTGCCGAACAGACAAGGCGTGGGCCACAGCACCTCAGAAGCCGACGCAGCTCGACGCAGGGGCCGGCAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS GCA 72 bp GCCGGCCCCTGCGTCGAGCTGCGTCGGCTTCTGAGGTaGTGTGGCCCACGCCTTGTCTGTTCGGCAGCCCAA +
Preference number: 6 (lower is better)
Translates to: AGPCVELRRLLR*CGPRLVCSAAQ
Trigger: TTGGGCTGCCGAACAGACAAGGCGTGGGCCACAGCACCTCAGAAGCCGACGCAGCTCGACGCAGGGGCCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS CCA 72 bp CCCCTGCGTCGAGCTGCGTCGGCTTCTGAGGTGCTGTaGCCCACGCCTTGTCTGTTCGGCAGCCCAAGGCAG +
Preference number: 6 (lower is better)
Translates to: PLRRAASASEVL*PTPCLFGSPRQ
Trigger: CTGCCTTGGGCTGCCGAACAGACAAGGCGTGGGCCACAGCACCTCAGAAGCCGACGCAGCTCGACGCAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369799.10
ENST00000393614.8
CDS CAA 72 bp GCCGCCACCCAGAGCCCCCGCACCTTCTTGGGCGCCTaGGTGACGGTGGCCATGAAGGAGTACTTCTCGGCG +
Preference number: 6 (lower is better)
Translates to: AATQSPRTFLGA*VTVAMKEYFSA
Trigger: CGCCGAGAAGTACTCCTTCATGGCCACCGTCACCAAGGCGCCCAAGAAGGTGCGGGGGCTCTGGGTGGCGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS CAA 90 bp GTGACGGTGGCCATGAAGGAGTACTTCTCGGCGTCCTCGATCTCCTaGGCCTGCTTCAGCTCCTCCCCGACCCCGGGCAGCGGCATCGCG +
Preference number: 6 (lower is better)
Translates to: VTVAMKEYFSASSIS*ACFSSSPTPGSGIA
Trigger: CGCGATGCCGCTGCCCGGGGTCGGGGAGGAGCTGAAGCAGGCCAAGGAGATCGAGGACGCCGAGAAGTACTCCTTCATGGCCACCGTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS GCA 72 bp AAGGAGTACTTCTCGGCGTCCTCGATCTCCTTGGCCTaGTTCAGCTCCTCCCCGACCCCGGGCAGCGGCATC +
Preference number: 6 (lower is better)
Translates to: KEYFSASSISLA*FSSSPTPGSGI
Trigger: GATGCCGCTGCCCGGGGTCGGGGAGGAGCTGAAGCAGGCCAAGGAGATCGAGGACGCCGAGAAGTACTCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS CAA 72 bp GCCATGAAGGAGTACTTCTCGGCGTCCTCGATCTCCTaGGCCTGCTTCAGCTCCTCCCCGACCCCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: AMKEYFSASSIS*ACFSSSPTPGS
Trigger: GCTGCCCGGGGTCGGGGAGGAGCTGAAGCAGGCCAAGGAGATCGAGGACGCCGAGAAGTACTCCTTCATGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS CAA 72 bp CCCATGCCCCCGGACTGGTCACAAGGGTCAGCTGAGTaGGTTCACCCCCTCCCACTCTCGTCTTCGAGGCCC +
Preference number: 6 (lower is better)
Translates to: PMPPDWSQGSAE*VHPLPLSSSRP
Trigger: GGGCCTCGAAGACGAGAGTGGGAGGGGGTGAACCAACTCAGCTGACCCTTGTGACCAGTCCGGGGGCATGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS CCA 72 bp CCATGCCCCCGGACTGGTCACAAGGGTCAGCTGAGTTaGTTCACCCCCTCCCACTCTCGTCTTCGAGGCCCT +
Preference number: 6 (lower is better)
Translates to: PCPRTGHKGQLS*FTPSHSRLRGP
Trigger: AGGGCCTCGAAGACGAGAGTGGGAGGGGGTGAACCAACTCAGCTGACCCTTGTGACCAGTCCGGGGGCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS CCA 72 bp TGGCCCTGTCGGGTTTCAAAACGATCCCGGAGGACTTaGGCCGAGGGACAAAGGAAAGCGAGGTCAGAGGCG +
Preference number: 6 (lower is better)
Translates to: WPCRVSKRSRRT*AEGQRKARSEA
Trigger: CGCCTCTGACCTCGCTTTCCTTTGTCCCTCGGCCCAAGTCCTCCGGGATCGTTTTGAAACCCGACAGGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS CAA 90 bp CTGCAACTCCAGCCTCAGCCAGTGCTGCAGCTACTTCATTCTGAGTaGAGTAGATGTTACAAGCAGACCAGCGGCACTGAGCCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: LQLQPQPVLQLLHSE*SRCYKQTSGTEPPG
Trigger: CCCTGGGGGCTCAGTGCCGCTGGTCTGCTTGTAACATCTACTCAACTCAGAATGAAGTAGCTGCAGCACTGGCTGAGGCTGGAGTTGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS CCA 72 bp ACGACCCTCTGCCAGGAGGACAACTCGTTTGCCATCTaGCCAGATGACATGGTCCACCTGAGAACGTACTCG +
Preference number: 6 (lower is better)
Translates to: TTLCQEDNSFAI*PDDMVHLRTYS
Trigger: CGAGTACGTTCTCAGGTGGACCATGTCATCTGGCCAGATGGCAAACGAGTTGTCCTCCTGGCAGAGGGTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS TCA 72 bp CACCAGCCAAGGGCTTCTCCCCCTGAGCACGTTTCCTaGGTGAAATCAGAGCAGACATGTCTTGCTCTGCAA +
Preference number: 6 (lower is better)
Translates to: HQPRASPPEHVS*VKSEQTCLALQ
Trigger: TTGCAGAGCAAGACATGTCTGCTCTGATTTCACTCAGGAAACGTGCTCAGGGGGAGAAGCCCTTGGCTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS GCA 72 bp CCCCTCATAGATCTAACTACTCTGCTTGTGCTGCTCTaGCAGGGTCCTTCTCTGTGTGTACCTCTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: PLIDLTTLLVLL*QGPSLCVPLPG
Trigger: TCCTGGCAGAGGTACACACAGAGAAGGACCCTGGCAGAGCAGCACAAGCAGAGTAGTTAGATCTATGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469401.1
CDS TCA 72 bp CCCACTATTTTAGCACCAGCCAAGGGCTTCTCCCCCTaGGCACGTTTCCTGAGTGAAATCAGAGCAGACATG +
Preference number: 6 (lower is better)
Translates to: PTILAPAKGFSP*ARFLSEIRADM
Trigger: CATGTCTGCTCTGATTTCACTCAGGAAACGTGCTCAGGGGGAGAAGCCCTTGGCTGGTGCTAAAATAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS TCA 72 bp AGCCTCAGCCAGTGCTGCAGCTACTTCATTCTGAGTTaGGTAGATGTTACAAGCAGACCAGCGGCACTGAGC +
Preference number: 6 (lower is better)
Translates to: SLSQCCSYFILS*VDVTSRPAALS
Trigger: GCTCAGTGCCGCTGGTCTGCTTGTAACATCTACTCAACTCAGAATGAAGTAGCTGCAGCACTGGCTGAGGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS CCA 72 bp GGAACTGTGGAGCAGCTCAAATTGAGTAGACGACCCTaGAAAGGTAAGAGAGAGCCCTGGGATGAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: GTVEQLKLSRRP*KGKREPWDELC
Trigger: ACAGAGCTCATCCCAGGGCTCTCTCTTACCTTTCCAGGGTCGTCTACTCAATTTGAGCTGCTCCACAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469401.1
CDS CAA 72 bp GACAGAACAAAGGTGGGAACTGTGGAGCAGCTCAAATaGAGTAGACGACCCTCTGCCAGGAGGACAACTCGT +
Preference number: 6 (lower is better)
Translates to: DRTKVGTVEQLK*SRRPSARRTTR
Trigger: ACGAGTTGTCCTCCTGGCAGAGGGTCGTCTACTCAATTTGAGCTGCTCCACAGTTCCCACCTTTGTTCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS TCA 72 bp ACAGAACAAAGGTGGGAACTGTGGAGCAGCTCAAATTaGGTAGACGACCCTCTGCCAGGAGGACAACTCGTT +
Preference number: 6 (lower is better)
Translates to: TEQRWELWSSSN*VDDPLPGGQLV
Trigger: AACGAGTTGTCCTCCTGGCAGAGGGTCGTCTACTCAATTTGAGCTGCTCCACAGTTCCCACCTTTGTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS CCA 72 bp TGTGCAGAAACCAGTCTTCTGAGACTTAGCAGGTTTTaGCTGCTCCCGGCTCTCCTTCCCTGTCTCAAGTTT +
Preference number: 6 (lower is better)
Translates to: CAETSLLRLSRF*LLPALLPCLKF
Trigger: AAACTTGAGACAGGGAAGGAGAGCCGGGAGCAGCCAAAACCTGCTAAGTCTCAGAAGACTGGTTTCTGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359172.3
CDS CCA 72 bp CTTCATCCAGGAAAAGTCAGTCGCAAATTTAAGGCCTaGCCCTGTCGGGTTTCAAAACGATCCCGGAGGACT +
Preference number: 6 (lower is better)
Translates to: LHPGKVSRKFKA*PCRVSKRSRRT
Trigger: AGTCCTCCGGGATCGTTTTGAAACCCGACAGGGCCAGGCCTTAAATTTGCGACTGACTTTTCCTGGATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000393614.8
CDS CCA 72 bp AGAGAGCCCTGGGATGAGCTCTGTCTCAGATTCCAATaGCATACAAGTCAAGCCAAAGCGGGAGAGGACTTT +
Preference number: 6 (lower is better)
Translates to: REPWDELCLRFQ*HTSQAKAGEDF
Trigger: AAAGTCCTCTCCCGCTTTGGCTTGACTTGTATGCCATTGGAATCTGAGACAGAGCTCATCCCAGGGCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469401.1
CDS CAA 90 bp CCTTGCTCTGCAATCTCAATCTCCCGGCGTCCAAATTCTGCCTGCTaGATGTTCTTCACACAGAAATTGCTGCTGCCCTTGGAGTTGGTT +
Preference number: 6 (lower is better)
Translates to: PCSAISISRRPNSAC*MFFTQKLLLPLELV
Trigger: AACCAACTCCAAGGGCAGCAGCAATTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTGGACGCCGGGAGATTGAGATTGCAGAGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475081.1
CDS TCA 72 bp CAATCTCAATCTCCCGGCGTCCAAATTCTGCCTGCTTaGTGTTCTTCACACAGAAATTGCTGCTGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: QSQSPGVQILPA*CSSHRNCCCPW
Trigger: CCAAGGGCAGCAGCAATTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTGGACGCCGGGAGATTGAGATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS CCA 72 bp CCGGAGTGCGGAGGCTGGTCACATCGATTTCTGTGTTaGAGTGGCCCATATTGCATACGATACAACTGTTTT +
Preference number: 6 (lower is better)
Translates to: PECGGWSHRFLC*SGPYCIRYNCF
Trigger: AAAACAGTTGTATCGTATGCAATATGGGCCACTCCAACACAGAAATCGATGTGACCAGCCTCCGCACTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS CCA 72 bp TTGAGTAGACGACCCTGGAAAGGTAAGAGAGAGCCCTaGGATGAGCTCTGTCTCAGATTCCAATGGCATACA +
Preference number: 6 (lower is better)
Translates to: LSRRPWKGKREP*DELCLRFQWHT
Trigger: TGTATGCCATTGGAATCTGAGACAGAGCTCATCCCAGGGCTCTCTCTTACCTTTCCAGGGTCGTCTACTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469401.1
CDS CAA 72 bp TCCGGAGTGCGGAGGCTGGTCACATCGATTTCTGTGTaGGAGTGGCCCATATTGCATACGATACAACTGTTT +
Preference number: 6 (lower is better)
Translates to: SGVRRLVTSISV*EWPILHTIQLF
Trigger: AAACAGTTGTATCGTATGCAATATGGGCCACTCCAACACAGAAATCGATGTGACCAGCCTCCGCACTCCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS CAA 90 bp TCTTGCTCTGCAATCTCAATCTCCCGGCGTCCAAATTCTGCCTGCTaGATGTTCTTCACACAGAAATTGCTGCTGCCCTTGGAGTTGGTT +
Preference number: 6 (lower is better)
Translates to: SCSAISISRRPNSAC*MFFTQKLLLPLELV
Trigger: AACCAACTCCAAGGGCAGCAGCAATTTCTGTGTGAAGAACATCAAGCAGGCAGAATTTGGACGCCGGGAGATTGAGATTGCAGAGCAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS CCA 72 bp TGTTCTTCACACAGAAATTGCTGCTGCCCTTGGAGTTaGTTTGCTGCTTCTCTCGGGGAGAAACCTCATCAT +
Preference number: 6 (lower is better)
Translates to: CSSHRNCCCPWS*FAASLGEKPHH
Trigger: ATGATGAGGTTTCTCCCCGAGAGAAGCAGCAAACCAACTCCAAGGGCAGCAGCAATTTCTGTGTGAAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
ENST00000475081.1
CDS CCA 72 bp AAGCGGGAGAGGACTTTACACCCCTCTAGACTCAGTTaGAAGAGGAAGAATTACAGTTCCAGATCAGGACTC +
Preference number: 6 (lower is better)
Translates to: KRERTLHPSRLS*KRKNYSSRSGL
Trigger: GAGTCCTGATCTGGAACTGTAATTCTTCCTCTTCCAACTGAGTCTAGAGGGGTGTAAAGTCCTCTCCCGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469401.1
CDS GCA 72 bp GTGCCAAAGCCTGTGCAAGTTATTACGACATCGACTTaGCGGATGACTTCATTTAGCTTTACCACCCTGAAC +
Preference number: 6 (lower is better)
Translates to: VPKPVQVITTST*RMTSFSFTTLN
Trigger: GTTCAGGGTGGTAAAGCTAAATGAAGTCATCCGGCAAGTCGATGTCGTAATAACTTGCACAGGCTTTGGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481423.1
CDS GCA 72 bp TTCTTATTTCCTGTGCAAGTTATTACGACATCGACTTaGCGGATGACTTCATTTAGCTTTACCACCCTGAAC +
Preference number: 6 (lower is better)
Translates to: FLFPVQVITTST*RMTSFSFTTLN
Trigger: GTTCAGGGTGGTAAAGCTAAATGAAGTCATCCGGCAAGTCGATGTCGTAATAACTTGCACAGGAAATAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8
CDS GCA 72 bp TTGCATACGATACAACTGTTTTTCATGCGATCCAAGTaGTCCCGTGTCACTACATTCTTATTTCCTGTGCAA +
Preference number: 6 (lower is better)
Translates to: LHTIQLFFMRSK*SRVTTFLFPVQ
Trigger: TTGCACAGGAAATAAGAATGTAGTGACACGGGAGCACTTGGATCGCATGAAAAACAGTTGTATCGTATGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359172.3
ENST00000369799.10
ENST00000393614.8