RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGXT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000113492

Ensembl transcript IDs: ENST00000231420.11, ENST00000505349.1, ENST00000505542.1, ENST00000510428.1, ENST00000512135.5, ENST00000618015.4

Found 326 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCCAGGAATaGTTAAGTGAGTGCTTCTTTGACATCACTAAGCACTTGGCTTCC +
Preference number: 1 (lower is better)
Translates to: LPQISRGPEVGWLQE*LSECFFDITKHLAS
Trigger: GGAAGCCAAGTGCTTAGTGATGTCAAAGAAGCACTCACTTAAGCATTCCTGGAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR TCA 90 bp ACATATGGTGTTCTCAGCGCAACAAGAAGACATCTCTTCTTGAACTaGAGAGTGAGGGTGAAGAAAACTTTCCCTGAAGGCACCTCCACC +
Preference number: 1 (lower is better)
Translates to: TYGVLSATRRHLFLN*RVRVKKTFPEGTST
Trigger: GGTGGAGGTGCCTTCAGGGAAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCGCTGAGAACACCATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
3UTR CCA 90 bp ACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTaGCTCCAGGAATGCTTAAGTGAGTGCTTCTTTGACATCACTAAG +
Preference number: 1 (lower is better)
Translates to: TMNLLPQISRGPEVG*LQECLSECFFDITK
Trigger: CTTAGTGATGTCAAAGAAGCACTCACTTAAGCATTCCTGGAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR-3UTR TCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGGGGAGATCCTTTCCCTaGAGAATGGAGTTCTCAAGA +
Preference number: 2 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRGRSFP*RMEFSR
Trigger: TCTTGAGAACTCCATTCTTCAGGGAAAGGATCTCCC...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR CAA 90 bp CTCCAGGAATGCTTAAGTGAGTGCTTCTTTGACATCACTAAGCACTaGGCTTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: LQECLSECFFDITKH*ASIHLPTSPKRVVL
Trigger: GAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAAGCCAAGTGCTTAGTGATGTCAAAGAAGCACTCACTTAAGCATTCCTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR-3UTR TCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGCATCTCTTCTTGAACTaGAGAGTGAGGGTGAAGAAA +
Preference number: 2 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPHLFLN*RVRVKK
Trigger: TTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATG...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR-3UTR TCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGCTTCAAATTCACCCTTaGACATACGTGGCAAATTCT +
Preference number: 2 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPLQIHP*TYVANS
Trigger: AGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAG...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR-3UTR TCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCTTAGGATTTATTCTCTaGGCTAGGGAGATCCTTTCC +
Preference number: 2 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLLGFIL*AREILS
Trigger: GGAAAGGATCTCCCTAGCTCAGAGAATAAATCCTAA...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR-3UTR TCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCCTTCAAATTCACCCTTaGACATACGTGGCAAATTCT +
Preference number: 2 (lower is better)
Translates to: IHHIFMHKPITAKGNQITLQIHP*TYVANS
Trigger: AGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAG...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR GCA 72 bp ATATCAAGAGGCCCTGAGGTAGGGTGGCTCCAGGAATaGTTAAGTGAGTGCTTCTTTGACATCACTAAGCAC +
Preference number: 3 (lower is better)
Translates to: ISRGPEVGWLQE*LSECFFDITKH
Trigger: GTGCTTAGTGATGTCAAAGAAGCACTCACTTAAGCATTCCTGGAGCCACCCTACCTCAGGGCCTCTTGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
3UTR CCA 72 bp TTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTaGCTCCAGGAATGCTTAAGTGAGTGCTTCTTTGAC +
Preference number: 3 (lower is better)
Translates to: LLPQISRGPEVG*LQECLSECFFD
Trigger: GTCAAAGAAGCACTCACTTAAGCATTCCTGGAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGTCCATGTGCCCCTGGTaGAGCAGCAGGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRSMCPW*SSRGFW
Trigger: CCAGAAACCCCTGCTGCTCCACCAGGGGCACATGGA...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGAAGAGCCACTCCATGTaGCCCTGGTGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLKSHSM*PWWSSR
Trigger: CCTGCTGCTCCACCAGGGGCACATGGAGTGGCTCTT...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGCACTCCATGTGCCCCTaGTGGAGCAGCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLHSMCP*WSSRGF
Trigger: GAAACCCCTGCTGCTCCACCAGGGGCACATGGAGTG...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGCCCATGGAAGCAGATTaGAGGCCGGGCTCTAACTGC +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRPMEAD*RPGSNC
Trigger: GCAGTTAGAGCCCGGCCTCCAATCTGCTTCCATGGG...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR GCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGAAGAGCCACTCCATGTaGCCCTGGTGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPKSHSM*PWWSSR
Trigger: CCTGCTGCTCCACCAGGGGCACATGGAGTGGCTCTT...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGGCTCCTGTGGAGAGCTaGAGGCTTTCTCTGGATACC +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRAPVES*RLSLDT
Trigger: GGTATCCAGAGAAAGCCTGCAGCTCTCCACAGGAGC...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGTCCTGGAGTGGTGACTaGCCATGGCTTCAGGCAAGC +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRSWSGD*PWLQAS
Trigger: GCTTGCCTGAAGCCATGGGCAGTCACCACTCCAGGA...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR CCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGCACTCCATGTGCCCCTaGTGGAGCAGCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPHSMCP*WSSRGF
Trigger: GAAACCCCTGCTGCTCCACCAGGGGCACATGGAGTG...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGTCAGGCAGGACATCGTaGGTTTGGAAGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRSGRTS*VWKPQK
Trigger: CTTCTGGGGCTTCCAAACCCACGATGTCCTGCCTGA...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR CCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGGCACAGCAGATCCAATaGCACAGGCCATGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRAQQIQ*HRPWGS
Trigger: GGAACCCCATGGCCTGTGCCATTGGATCTGCTGTGC...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR CCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGGGCCCTGAGGTAGGGTaGCTCCAGGAATGCTTAAGT +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRGPEVG*LQECLS
Trigger: ACTTAAGCATTCCTGGAGCCACCCTACCTCAGGGCC...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGTGGAAGCCCCAGAAGTaGGAGCCCAACCTTCCAAAT +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRWKPQK*EPNLPN
Trigger: ATTTGGAAGGTTGGGCTCTCACTTCTGGGGCTTCCA...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR TCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGAATATCAAGAGGCCCTaGGGTAGGGTGGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLNIKRP*GRVAPG
Trigger: TCCTGGAGCCACCCTACCTCAGGGCCTCTTGATATT...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAGGAATCCTGGAGTGGTaGCTGCCCATGGCTTCAGGC +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTGILEW*LPMASG
Trigger: GCCTGAAGCCATGGGCAGTCACCACTCCAGGATTCC...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR GCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAAGACGGTGCTTGTATaGCACAGGCGGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTKTVLV*HRRPSC
Trigger: GCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTT...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGGCACACGCCTCCCCTTaGTCGCACCAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQAHASP*SHQLKG
Trigger: GCCTTTGAGCTGGTGCGAGCAAGGGGAGGCGTGTGC...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGGGACACATTGTTGGTTaGCAACCTGTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLGHIVG*QPVPPG
Trigger: CCCTGGTGGGACAGGTTGCCAACCAACAATGTGTCC...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGGGACACATTGTTGGTTaGCAACCTGTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRGHIVG*QPVPPG
Trigger: CCCTGGTGGGACAGGTTGCCAACCAACAATGTGTCC...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGGGCCCTGAGGTAGGGTaGCTCCAGGAATGCTTAAGT +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLGPEVG*LQECLS
Trigger: ACTTAAGCATTCCTGGAGCCACCCTACCTCAGGGCC...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGAGGCTCAGGAAAGGATaGATCTCAAGGATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRRLRKG*ISRILG
Trigger: TCCCAGGATCCTTGAGATGCATCCTTTCCTGAGCCT...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACACACAGGCGGCCGAGCTaGTTTTGTGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTHRRPS*FCATAF
Trigger: GAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTG...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGACGAGGAGTCCCATGTaGTTGCAGTCCTCATGGATC +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRTRSPM*LQSSWI
Trigger: GATCCATGAGGACTGCAAGCACATGGGACTCCTCGT...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGATCTGGACACATTGTTaGTTGGCAACCTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRIWTHC*LATCPT
Trigger: GGTGGGACAGGTTGCCAACCAACAATGTGTCCAGAT...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGATCCAGCAATTGACTTaGCCACAGATGTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRIQQLT*PQMCSA
Trigger: CGCTGAGCACATCTGTGGCCAAGTCAATTGCTGGAT...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCTCCTGGGAGCGGAAGTaGCCAGGCACAAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLSWERK*PGTRVS
Trigger: TGAGACCCTTGTGCCTGGTCACTTCCGCTCCCAGGA...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCTCCTGGGAGCGGAAGTaGCCAGGCACAAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGSWERK*PGTRVS
Trigger: TGAGACCCTTGTGCCTGGTCACTTCCGCTCCCAGGA...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR TCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGCAGCTCATTGGCTTCTaGGCCACTGTTCACCAAGAA +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLQLIGF*ATVHQE
Trigger: TTCTTGGTGAACAGTGGCTCAGAAGCCAATGAGCTG...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGTCTCTGGAGTGGTTATaGCTGCTGCCATGGGAAAGC +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPSLEWL*LLPWES
Trigger: GCTTTCCCATGGCAGCAGTCATAACCACTCCAGAGA...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR GCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGTCTATGTTGTTTGAGTaGGCCCTGGCCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLSMLFE*ALAISM
Trigger: CATGCTGATGGCCAGGGCGCACTCAAACAACATAGA...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCAAGTGTGTAAGGACTaGATCCATGGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRQVCKD*IHGRLL
Trigger: GAGGAGCCTACCATGGATGCAGTCCTTACACACTTG...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGTTGGCAGCAGTCTGGTaGACAGCTGCACTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPLAAVW*TAALPD
Trigger: ATCAGGAAGTGCAGCTGTGCACCAGACTGCTGCCAA...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGCACACGCCTCCCCTTaGTCGCACCAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFAHASP*SHQLKG
Trigger: GCCTTTGAGCTGGTGCGAGCAAGGGGAGGCGTGTGC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGCCAAAGGTGTTGAAGTaGTGCAGGCATTTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRPKVLK*CRHFAK
Trigger: TTTGGCGAAATGCCTGCAGCACTTCAACACCTTTGG...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR GCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGGGGTGGCTCCAGGAATaGTTAAGTGAGTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRGWLQE*LSECFF
Trigger: AAAGAAGCACTCACTTAAGCATTCCTGGAGCCACCC...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGGAAAGCCAACCCCCATaGAAGCAGATTGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQESQPP*KQIGGR
Trigger: CCGGCCTCCAATCTGCTTCCATGGGGGTTGGCTTTC...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGAGCAGCAGGGGTTTCTaGAAATATGCCGTCACCACA +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRSSRGF*KYAVTT
Trigger: TGTGGTGACGGCATATTTCCAGAAACCCCTGCTGCT...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCTCCATGTGCCCCTGGTaGAGCAGCAGGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGSMCPW*SSRGFW
Trigger: CCAGAAACCCCTGCTGCTCCACCAGGGGCACATGGA...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCACTCCATGTGCCCCTaGTGGAGCAGCAGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGHSMCP*WSSRGF
Trigger: GAAACCCCTGCTGCTCCACCAGGGGCACATGGAGTG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGACCTTTGGGTGGCAATaGCCAACACTGACAGTAACA +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRTFGWQ*PTLTVT
Trigger: TGTTACTGTCAGTGTTGGCCATTGCCACCCAAAGGT...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCATGGCCAGCTCATTaGCTTCTGAGCCACTGTTCA +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPAWPAH*LLSHCS
Trigger: TGAACAGTGGCTCAGAAGCCAATGAGCTGGCCATGC...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACACAATGGCACAGGCCATaGGGTTCCCTCCAAAGGTGT +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTQWHRP*GSLQRC
Trigger: ACACCTTTGGAGGGAACCCCATGGCCTGTGCCATTG...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR CCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGAGTGGTGACTGCCCATaGCTTCAGGCAAGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQSGDCP*LQASPR
Trigger: TCTGGGGCTTGCCTGAAGCCATGGGCAGTCACCACT...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR CCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGCTAAAAGGGGAATCCTaGAGTGGTGACTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPLKGES*SGDCPW
Trigger: CCATGGGCAGTCACCACTCCAGGATTCCCCTTTTAG...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR GCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGGGGTTTCTGGAAATATaGCGTCACCACAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLGFLEI*RHHRRK
Trigger: CTTTCTCCTGTGGTGACGGCATATTTCCAGAAACCC...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTAAGAGCCACTCCATGTaGCCCTGGTGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFKSHSM*PWWSSR
Trigger: CCTGCTGCTCCACCAGGGGCACATGGAGTGGCTCTT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAGCCGAGCTGCTTTTGTaGCACTGCATTCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTAELLL*HCIHLW
Trigger: CCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGC...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCACAGGCGGCCGAGCTaGTTTTGTGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGHRRPS*FCATAF
Trigger: GAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTAAGACGGTGCTTGTATaGCACAGGCGGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFKTVLV*HRRPSC
Trigger: GCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCGGTGGAAGAAGACGGTaGTTGTATGCCACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGGGRRR*LYATGG
Trigger: GCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACC...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGAGTGGTTATGACTGCTaGCATGGGAAAGCCATTCCC +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPSGYDC*HGKAIP
Trigger: GGGAATGGCTTTCCCATGGCAGCAGTCATAACCACT...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR CCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCGAAAGCCAACCCCCATaGAAGCAGATTGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLESQPP*KQIGGR
Trigger: CCGGCCTCCAATCTGCTTCCATGGGGGTTGGCTTTC...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGAGGCATGAAGTCACATaGAGGCATTCTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRRHEVT*RHSGLC
Trigger: ACAAAGCCCAGAATGCCTCCATGTGACTTCATGCCT...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTCCATGTGCCCCTGGTaGAGCAGCAGGGGTTTCTGG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFSMCPW*SSRGFW
Trigger: CCAGAAACCCCTGCTGCTCCACCAGGGGCACATGGA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGAGCTTGGCAGCAGTCTaGTGCACAGCTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQSLAAV*CTAALP
Trigger: AGGAAGTGCAGCTGTGCACCAGACTGCTGCCAAGCT...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGACTTTGAGATTAAGATaGGGAGGAGGCGCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRTLRLR*GGGAKR
Trigger: CCTTTTAGCGCCTCCTCCCCATCTTAATCTCAAAGT...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR TCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGGCTTTGTATGAAGACTaGGCTTGGTTACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLALYED*AWLLMS
Trigger: GGACATCAGTAACCAAGCTCAGTCTTCATACAAAGC...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGATTCTGGGCTTTGTATaGAGACTGAGCTTGGTTACT +
Preference number: 4 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRILGFV*RLSLVT
Trigger: AGTAACCAAGCTCAGTCTTCATACAAAGCCCAGAAT...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGCACAGCTGCACTTCCTaGTTGTTTGCACTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPHSCTS*LFALEN
Trigger: ATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTG...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGTTTAGTGATGCACATTaGGGGCGCAATGCGAAATGT +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLFSDAH*GRNAKC
Trigger: ACATTTCGCATTGCGCCCTCAATGTGCATCACTAAA...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGGGAGATCCTTTCCCTaGAGAATGGAGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPGRSFP*RMEFSR
Trigger: TCTTGAGAACTCCATTCTTCAGGGAAAGGATCTCCC...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGAAGAAAACTTTCCCTaGAGGCACCTCCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPEENFP*RHLHQK
Trigger: CTTTTGGTGGAGGTGCCTTCAGGGAAAGTTTTCTTC...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCAATATCAAGAGGCCCTaGGGTAGGGTGGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLNIKRP*GRVAPG
Trigger: TCCTGGAGCCACCCTACCTCAGGGCCTCTTGATATT...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCACAGGCGGCCGAGCTaGTTTTGTGCCACTGCATTC +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFHRRPS*FCATAF
Trigger: GAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGGTGGAAGAAGACGGTaGTTGTATGCCACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFGGRRR*LYATGG
Trigger: GCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGTGCGGCAAGCTTCTCTaGATATTCATGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPCGKLL*IFMHWR
Trigger: CCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCA...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAGGCTCAGGAAGAAGTaGGGCAAGCTTCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTRLRKK*GKLLCI
Trigger: TATGCAGAGAAGCTTGCCGCACTTCTTCCTGAGCCT...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACACAAGTGTGTAAGGACTaGATCCATGGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTQVCKD*IHGRLL
Trigger: GAGGAGCCTACCATGGATGCAGTCCTTACACACTTG...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAGCAGCAGGGGTTTCTaGAAATATGCCGTCACCACA +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTSSRGF*KYAVTT
Trigger: TGTGGTGACGGCATATTTCCAGAAACCCCTGCTGCT...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGTCATGCATTGGAGGGTaGAAGAAGACGGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPSCIGG*KKTVLV
Trigger: TACAAGCACCGTCTTCTTCCACCCTCCAATGCATGA...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGTGCATATTCATGCATTaGAGGGTGGAAGAAGACGGT +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRCIFMH*RVEEDG
Trigger: ACCGTCTTCTTCCACCCTCCAATGCATGAATATGCA...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTGTTTGAGTGCGCCCTaGCCATCAGCATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFCLSAP*PSAWPA
Trigger: AGCTGGCCATGCTGATGGCCAGGGCGCACTCAAACA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCGGACACATTGTTGGTTaGCAACCTGTCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGGHIVG*QPVPPG
Trigger: CCCTGGTGGGACAGGTTGCCAACCAACAATGTGTCC...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGGAGAATCTCGACAGTaGCTTCCTCCCCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFGESRQ*LPPQGP
Trigger: TGGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCAGCTTGGCAGCAGTCTaGTGCACAGCTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGSLAAV*CTAALP
Trigger: AGGAAGTGCAGCTGTGCACCAGACTGCTGCCAAGCT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGAGATTTGGCAATCTCTaGAGTGGTTATGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLRFGNL*SGYDCC
Trigger: GCAGCAGTCATAACCACTCCAGAGATTGCCAAATCT...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR TCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCGATGTCTATGTTGTTTaGGTGCGCCCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLDVYVV*VRPGHQ
Trigger: CTGATGGCCAGGGCGCACTCAAACAACATAGACATC...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACACACAGCTGCACTTCCTaGTTGTTTGCACTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTHSCTS*LFALEN
Trigger: ATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTG...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGTTAGGATTTATTCTCTaGGCTAGGGAGATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRLGFIL*AREILS
Trigger: GGAAAGGATCTCCCTAGCTCAGAGAATAAATCCTAA...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCGCCGAGCTGCTTTTGTaGCACTGCATTCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGAELLL*HCIHLW
Trigger: CCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGC...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACATGCGGCAAGCTTCTCTaGATATTCATGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTCGKLL*IFMHWR
Trigger: CCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCA...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGTCTATGTTGTTTGAGTaGGCCCTGGCCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQSMLFE*ALAISM
Trigger: CATGCTGATGGCCAGGGCGCACTCAAACAACATAGA...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGCACTTCCTGATTGTTTaGACTGGAGAATCTCGACAG +
Preference number: 4 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPHFLIV*TGESRQ
Trigger: CTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTG...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTGCACACGCCTCCCCTTaGTCGCACCAGCTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFIAHASP*SHQLKG
Trigger: GCCTTTGAGCTGGTGCGAGCAAGGGGAGGCGTGTGC...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGGGAGTCCCATGTGCTTaGAGTCCTCATGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQGVPCA*SPHGSD
Trigger: ATCAGATCCATGAGGACTGCAAGCACATGGGACTCC...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCACGAGGAGTCCCATGTaGTTGCAGTCCTCATGGATC +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGTRSPM*LQSSWI
Trigger: GATCCATGAGGACTGCAAGCACATGGGACTCCTCGT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCTCACTTCATCTGCAATaGACACGCCTCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGSLHLQ*TRLPLL
Trigger: GAGCAAGGGGAGGCGTGTGCATTGCAGATGAAGTGA...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTAGGCCGGGCTCTAACTaGTCACTATCCTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFRPGSN*SLSCWT
Trigger: AGTCCAGCAGGATAGTGAGCAGTTAGAGCCCGGCCT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR CCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAGGCATGAAGTCACATaGAGGCATTCTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTRHEVT*RHSGLC
Trigger: ACAAAGCCCAGAATGCCTCCATGTGACTTCATGCCT...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAACCTTTGGGTGGCAATaGCCAACACTGACAGTAACA +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTTFGWQ*PTLTVT
Trigger: TGTTACTGTCAGTGTTGGCCATTGCCACCCAAAGGT...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCGCATGGCCAGCTCATTaGCTTCTGAGCCACTGTTCA +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGAWPAH*LLSHCS
Trigger: TGAACAGTGGCTCAGAAGCCAATGAGCTGGCCATGC...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCCTTTCCCTGAAGAATaGAGTTCTCAAGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRPFPEE*SSQDKR
Trigger: CCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGG...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTCCTGGGAGCGGAAGTaGCCAGGCACAAGGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFISWERK*PGTRVS
Trigger: TGAGACCCTTGTGCCTGGTCACTTCCGCTCCCAGGA...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCCAGCTCATTGGCTTCTaGGCCACTGTTCACCAAGAA +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLQLIGF*ATVHQE
Trigger: TTCTTGGTGAACAGTGGCTCAGAAGCCAATGAGCTG...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCAGCTCATTGGCTTCTaGGCCACTGTTCACCAAGAA +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGQLIGF*ATVHQE
Trigger: TTCTTGGTGAACAGTGGCTCAGAAGCCAATGAGCTG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR TCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGATGTCTATGTTGTTTaGGTGCGCCCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFDVYVV*VRPGHQ
Trigger: CTGATGGCCAGGGCGCACTCAAACAACATAGACATC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR TCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACATTTAGTGATGCACATTaGGGGCGCAATGCGAAATGT +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTFSDAH*GRNAKC
Trigger: ACATTTCGCATTGCGCCCTCAATGTGCATCACTAAA...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGGGGAGATCCTTTCCCTaGAGAATGGAGTTCTCAAGA +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQGRSFP*RMEFSR
Trigger: TCTTGAGAACTCCATTCTTCAGGGAAAGGATCTCCC...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCAGGCTCAGGAAAGGATaGATCTCAAGGATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGRLRKG*ISRILG
Trigger: TCCCAGGATCCTTGAGATGCATCCTTTCCTGAGCCT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCAGGCTCAGGAAAGGATaGATCTCAAGGATCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLRLRKG*ISRILG
Trigger: TCCCAGGATCCTTGAGATGCATCCTTTCCTGAGCCT...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGAGAAATCCAGGTATCTaGTTCCTTCAGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRRNPGI*FLQHQR
Trigger: TCTTTGATGCTGAAGGAAGCAGATACCTGGATTTCT...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGAGAAATCCAGGTATCTaGTTCCTTCAGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLRNPGI*FLQHQR
Trigger: TCTTTGATGCTGAAGGAAGCAGATACCTGGATTTCT...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCTGCTTTTGTGCCACTaGATTCACCTTTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGLLLCH*IHLWVA
Trigger: TGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTAAGACGGTGCTTGTATaGCACAGGCGGCCGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFKTVLV*HRRPSC
Trigger: GCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTT...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCAGGCTCAGGAAGAAGTaGGGCAAGCTTCTCTGCATA +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGRLRKK*GKLLCI
Trigger: TATGCAGAGAAGCTTGCCGCACTTCTTCCTGAGCCT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCAAGTGTGTAAGGACTaGATCCATGGTAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGQVCKD*IHGRLL
Trigger: GAGGAGCCTACCATGGATGCAGTCCTTACACACTTG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTTGGCAGCAGTCTGGTaGACAGCTGCACTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFLAAVW*TAALPD
Trigger: ATCAGGAAGTGCAGCTGTGCACCAGACTGCTGCCAA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACACTTCCAAATCCTGTCTaGACTTCATCTGCAATGCAC +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTLPNPV*TSSAMH
Trigger: GTGCATTGCAGATGAAGTGCAGACAGGATTTGGAAG...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR GCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAAGGTGTTGAAGTGCTaGAGGCATTTCGCCAAAGAT +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTKVLKC*RHFAKD
Trigger: ATCTTTGGCGAAATGCCTGCAGCACTTCAACACCTT...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCAGCAGCAGGGGTTTCTaGAAATATGCCGTCACCACA +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGSSRGF*KYAVTT
Trigger: TGTGGTGACGGCATATTTCCAGAAACCCCTGCTGCT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCACTGCATTCACCTTTaGGTGGCAATGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGHCIHL*VAMANT
Trigger: AGTGTTGGCCATTGCCACCCAAAGGTGAATGCAGTG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGTCATGCATTGGAGGGTaGAAGAAGACGGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQSCIGG*KKTVLV
Trigger: TACAAGCACCGTCTTCTTCCACCCTCCAATGCATGA...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCATCTGGACACATTGTTaGTTGGCAACCTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGIWTHC*LATCPT
Trigger: GGTGGGACAGGTTGCCAACCAACAATGTGTCCAGAT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGCTTCTTTCCATGTGTTaGGTTAAGGCAGAACGAAAT +
Preference number: 4 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLLLSMC*VKAERN
Trigger: ATTTCGTTCTGCCTTAACCCAACACATGGAAAGAAG...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAATTCTGGGCTTTGTATaGAGACTGAGCTTGGTTACT +
Preference number: 4 (lower is better)
Translates to: EILSLKNGVLKIRGALLTILGFV*RLSLVT
Trigger: AGTAACCAAGCTCAGTCTTCATACAAAGCCCAGAAT...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCACAGCTGCACTTCCTaGTTGTTTGCACTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGHSCTS*LFALEN
Trigger: ATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR TCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCGAAGAAAACTTTCCCTaGAGGCACCTCCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGEENFP*RHLHQK
Trigger: CTTTTGGTGGAGGTGCCTTCAGGGAAAGTTTTCTTC...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCTGCTTTTGTGCCACTaGATTCACCTTTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFLLLCH*IHLWVA
Trigger: TGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCGGTGGAAGAAGACGGTaGTTGTATGCCACAGGCGGC +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITGGRRR*LYATGG
Trigger: GCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACC...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCTGCGGCAAGCTTCTCTaGATATTCATGCATTGGAGG +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGCGKLL*IFMHWR
Trigger: CCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCA...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTCTATGTTGTTTGAGTaGGCCCTGGCCATCAGCATG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFSMLFE*ALAISM
Trigger: CATGCTGATGGCCAGGGCGCACTCAAACAACATAGA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGGAGTCCCATGTGCTTaGAGTCCTCATGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFGVPCA*SPHGSD
Trigger: ATCAGATCCATGAGGACTGCAAGCACATGGGACTCC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCAGGCATGAAGTCACATaGAGGCATTCTGGGCTTTGT +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGRHEVT*RHSGLC
Trigger: ACAAAGCCCAGAATGCCTCCATGTGACTTCATGCCT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGCATTCACCTTTGGGTaGCAATGGCCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFAFTFG*QWPTLT
Trigger: TGTCAGTGTTGGCCATTGCCACCCAAAGGTGAATGC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGTGCATATTCATGCATTaGAGGGTGGAAGAAGACGGT +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQCIFMH*RVEEDG
Trigger: ACCGTCTTCTTCCACCCTCCAATGCATGAATATGCA...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTTGTTTGAGTGCGCCCTaGCCATCAGCATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFCLSAP*PSAWPA
Trigger: AGCTGGCCATGCTGATGGCCAGGGCGCACTCAAACA...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTGTTTGAGTGCGCCCTaGCCATCAGCATGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFICLSAP*PSAWPA
Trigger: AGCTGGCCATGCTGATGGCCAGGGCGCACTCAAACA...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTGGAGAATCTCGACAGTaGCTTCCTCCCCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFGESRQ*LPPQGP
Trigger: TGGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCC...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTGGAGAATCTCGACAGTaGCTTCCTCCCCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFIGESRQ*LPPQGP
Trigger: TGGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCC...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTATCCAGCAATTGACTTaGCCACAGATGTGCTCAGCG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFIQQLT*PQMCSA
Trigger: CGCTGAGCACATCTGTGGCCAAGTCAATTGCTGGAT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCTTTTACAGCTCCTGTaGAGAGCTGCAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFLLQLL*RAAGFL
Trigger: GAGAAAGCCTGCAGCTCTCCACAGGAGCTGTAAAAG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGGTATCTTTCAGGCATaGAGTCACATGGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFGIFQA*SHMEAF
Trigger: GAATGCCTCCATGTGACTTCATGCCTGAAAGATACC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR TCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTTTCTATGCCTATCATaGGACCTTTGCCTCGGACGT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFFLCLS*DLCLGR
Trigger: ACGTCCGAGGCAAAGGTCTCATGATAGGCATAGAAA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR TCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCAGTCCTCATGGATCTaGTTTACTTCTTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFQSSWI*FTSSRG
Trigger: TCCCCGTGAAGAAGTAAATCAGATCCATGAGGACTG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR TCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGCATCTCTTCTTGAACTaGAGAGTGAGGGTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQHLFLN*RVRVKK
Trigger: TTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATG...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGGGTTTCTGGAAATATaGCGTCACCACAGGAGAAAG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFGFLEI*RHHRRK
Trigger: CTTTCTCCTGTGGTGACGGCATATTTCCAGAAACCC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTGCCGAGCTGCTTTTGTaGCACTGCATTCACCTTTGG +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGAELLL*HCIHLW
Trigger: CCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGC...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCCACTTCCTGATTGTTTaGACTGGAGAATCTCGACAG +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLHFLIV*TGESRQ
Trigger: CTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTG...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTGGCAGCAGTCTGGTaGACAGCTGCACTTCCTGAT +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGLAAVW*TAALPD
Trigger: ATCAGGAAGTGCAGCTGTGCACCAGACTGCTGCCAA...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCGCACTTCATCTGCAATaGACACGCCTCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITALHLQ*TRLPLL
Trigger: GAGCAAGGGGAGGCGTGTGCATTGCAGATGAAGTGC...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR GCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTACGAGGAGTCCCATGTaGTTGCAGTCCTCATGGATC +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGTRSPM*LQSSWI
Trigger: GATCCATGAGGACTGCAAGCACATGGGACTCCTCGT...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCTTTAATCACTTCATCTaGAATGCACACGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLFNHFI*NAHASP
Trigger: AGGGGAGGCGTGTGCATTGCAGATGAAGTGATTAAA...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTACCTTTGGGTGGCAATaGCCAACACTGACAGTAACA +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFTFGWQ*PTLTVT
Trigger: TGTTACTGTCAGTGTTGGCCATTGCCACCCAAAGGT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTCATGCATTGGAGGGTaGAAGAAGACGGTGCTTGTA +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFSCIGG*KKTVLV
Trigger: TACAAGCACCGTCTTCTTCCACCCTCCAATGCATGA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCTGCATATTCATGCATTaGAGGGTGGAAGAAGACGGT +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGCIFMH*RVEEDG
Trigger: ACCGTCTTCTTCCACCCTCCAATGCATGAATATGCA...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTGCATGGCCAGCTCATTaGCTTCTGAGCCACTGTTCA +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGAWPAH*LLSHCS
Trigger: TGAACAGTGGCTCAGAAGCCAATGAGCTGGCCATGC...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCCTGATTGTTTGCACTaGAGAATCTCGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFPDCLH*RISTVA
Trigger: AGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCAGCTTGGCAGCAGTCTaGTGCACAGCTGCACTTCCT +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITSLAAV*CTAALP
Trigger: AGGAAGTGCAGCTGTGCACCAGACTGCTGCCAAGCT...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGCTTTGTATGAAGACTaGGCTTGGTTACTGATGTCC +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFALYED*AWLLMS
Trigger: GGACATCAGTAACCAAGCTCAGTCTTCATACAAAGC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR TCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCATTCTGGGCTTTGTATaGAGACTGAGCTTGGTTACT +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGILGFV*RLSLVT
Trigger: AGTAACCAAGCTCAGTCTTCATACAAAGCCCAGAAT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR TCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTGATGTCTATGTTGTTTaGGTGCGCCCTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFIDVYVV*VRPGHQ
Trigger: CTGATGGCCAGGGCGCACTCAAACAACATAGACATC...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTTTAGTGATGCACATTaGGGGCGCAATGCGAAATGT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFFSDAH*GRNAKC
Trigger: ACATTTCGCATTGCGCCCTCAATGTGCATCACTAAA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR TCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCATCTCTTCTTGAACTaGAGAGTGAGGGTGAAGAAA +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGHLFLN*RVRVKK
Trigger: TTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCACTTCCTGATTGTTTaGACTGGAGAATCTCGACAG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFHFLIV*TGESRQ
Trigger: CTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTGGAGTCCCATGTGCTTaGAGTCCTCATGGATCTGAT +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGGVPCA*SPHGSD
Trigger: ATCAGATCCATGAGGACTGCAAGCACATGGGACTCC...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTCACTTCATCTGCAATaGACACGCCTCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFISLHLQ*TRLPLL
Trigger: GAGCAAGGGGAGGCGTGTGCATTGCAGATGAAGTGA...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTTTAATCACTTCATCTaGAATGCACACGCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFFNHFI*NAHASP
Trigger: AGGGGAGGCGTGTGCATTGCAGATGAAGTGATTAAA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTGCATTCACCTTTGGGTaGCAATGGCCAACACTGACA +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGAFTFG*QWPTLT
Trigger: TGTCAGTGTTGGCCATTGCCACCCAAAGGTGAATGC...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTCACTGCATTCACCTTTaGGTGGCAATGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGHCIHL*VAMANT
Trigger: AGTGTTGGCCATTGCCACCCAAAGGTGAATGCAGTG...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTGGTATCTTTCAGGCATaGAGTCACATGGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGGIFQA*SHMEAF
Trigger: GAATGCCTCCATGTGACTTCATGCCTGAAAGATACC...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCAATTGCTCAATATACTaGTCTTTAGCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGNCSIY*SLAWQQ
Trigger: CTGCTGCCAAGCTAAAGATCAGTATATTGAGCAATT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR TCA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGTGCTCAGCGTATCTTTaGATTGCTCAATATACTGAT +
Preference number: 4 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQCSAYL*IAQYTD
Trigger: ATCAGTATATTGAGCAATTCAAAGATACGCTGAGCA...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTTAGGATTTATTCTCTaGGCTAGGGAGATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFLGFIL*AREILS
Trigger: GGAAAGGATCTCCCTAGCTCAGAGAATAAATCCTAA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTCTGCTTTTGTGCCACTaGATTCACCTTTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFILLLCH*IHLWVA
Trigger: TGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAG...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTTCTCTGCATATTCATaGATTGGAGGGTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFFSAYS*IGGWKK
Trigger: CTTCTTCCACCCTCCAATGCATGAATATGCAGAGAA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCAGCTTATCTTATCCTaGACCATTTCTATGCCTATC +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGQLILS*TISMPI
Trigger: GATAGGCATAGAAATGGTGCAGGATAAGATAAGCTG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR GCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCAACTGCTCACTATCCTaGTGGACTTTGAGATTAAGA +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLNCSLS*WTLRLR
Trigger: TCTTAATCTCAAAGTCCAGCAGGATAGTGAGCAGTT...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR CCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCCACTGCATTCACCTTTaGGTGGCAATGGCCAACACT +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITHCIHL*VAMANT
Trigger: AGTGTTGGCCATTGCCACCCAAAGGTGAATGCAGTG...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCATCTGGACACATTGTTaGTTGGCAACCTGTCCCACC +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITIWTHC*LATCPT
Trigger: GGTGGGACAGGTTGCCAACCAACAATGTGTCCAGAT...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTCCTGATTGTTTGCACTaGAGAATCTCGACAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGPDCLH*RISTVA
Trigger: AGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGG...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCATTTCGCCAAAGATTTaGCAATCTCTGGAGTGGTTA +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLISPKI*QSLEWL
Trigger: TAACCACTCCAGAGATTGCCAAATCTTTGGCGAAAT...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR CCA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCTTCTTTCCATGTGTTaGGTTAAGGCAGAACGAAAT +
Preference number: 4 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGLLSMC*VKAERN
Trigger: ATTTCGTTCTGCCTTAACCCAACACATGGAAAGAAG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCCTTTTACAGCTCCTGTaGAGAGCTGCAGGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITLLQLL*RAAGFL
Trigger: GAGAAAGCCTGCAGCTCTCCACAGGAGCTGTAAAAG...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCCTTTCCCTGAAGAATaGAGTTCTCAAGATAAGAGG +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFPFPEE*SSQDKR
Trigger: CCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTACATCACTAAGCACTTaGCTTCCATCCATCTTCCAA +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFTSLST*LPSIFQ
Trigger: TTGGAAGATGGATGGAAGCCAAGTGCTTAGTGATGT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTGGTATCTTTCAGGCATaGAGTCACATGGAGGCATTC +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFIGIFQA*SHMEAF
Trigger: GAATGCCTCCATGTGACTTCATGCCTGAAAGATACC...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCTGCTCAGCGTATCTTTaGATTGCTCAATATACTGAT +
Preference number: 4 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLCSAYL*IAQYTD
Trigger: ATCAGTATATTGAGCAATTCAAAGATACGCTGAGCA...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCTTTCTATGCCTATCATaGGACCTTTGCCTCGGACGT +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITFLCLS*DLCLGR
Trigger: ACGTCCGAGGCAAAGGTCTCATGATAGGCATAGAAA...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCCAGTCCTCATGGATCTaGTTTACTTCTTCACGGGGA +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITQSSWI*FTSSRG
Trigger: TCCCCGTGAAGAAGTAAATCAGATCCATGAGGACTG...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTGAAGAAAACTTTCCCTaGAGGCACCTCCACCAAAAG +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFIEENFP*RHLHQK
Trigger: CTTTTGGTGGAGGTGCCTTCAGGGAAAGTTTTCTTC...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTAGAAATCCAGGTATCTaGTTCCTTCAGCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFRNPGI*FLQHQR
Trigger: TCTTTGATGCTGAAGGAAGCAGATACCTGGATTTCT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR GCA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTTGGAGTGGTTATGACTaGTGCCATGGGAAAGCCATT +
Preference number: 4 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFWSGYD*CHGKAI
Trigger: AATGGCTTTCCCATGGCAGCAGTCATAACCACTCCA...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR TCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTGCTCAGCGTATCTTTaGATTGCTCAATATACTGAT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFCSAYL*IAQYTD
Trigger: ATCAGTATATTGAGCAATTCAAAGATACGCTGAGCA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR TCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTCTTCAAATTCACCCTTaGACATACGTGGCAAATTCT +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGLQIHP*TYVANS
Trigger: AGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAG...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTTCTCTGCATATTCATaGATTGGAGGGTGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFIFSAYS*IGGWKK
Trigger: CTTCTTCCACCCTCCAATGCATGAATATGCAGAGAA...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTCAGCTTATCTTATCCTaGACCATTTCTATGCCTATC +
Preference number: 4 (lower is better)
Translates to: KFFKFTLEHTWQILETCGQLILS*TISMPI
Trigger: GATAGGCATAGAAATGGTGCAGGATAAGATAAGCTG...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTACATCACTAAGCACTTaGCTTCCATCCATCTTCCAA +
Preference number: 4 (lower is better)
Translates to: FKFTLEHTWQILETCGFITSLST*LPSIFQ
Trigger: TTGGAAGATGGATGGAAGCCAAGTGCTTAGTGATGT...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CCA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTTTCTTCAAGATTCAGTaGCAAATTCTTGAGACTTGT +
Preference number: 4 (lower is better)
Translates to: RNKKTSLLELKSEGEENFFFKIQ*QILETC
Trigger: ACAAGTCTCAAGAATTTGCCACTGAATCTTGAAGAA...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR TCA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCAATTGCTCAATATACTaGTCTTTAGCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IHHIFMHKPITAKGNQITNCSIY*SLAWQQ
Trigger: CTGCTGCCAAGCTAAAGATCAGTATATTGAGCAATT...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTAATTGCTCAATATACTaGTCTTTAGCTTGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFNCSIY*SLAWQQ
Trigger: CTGCTGCCAAGCTAAAGATCAGTATATTGAGCAATT...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR TCA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTCTTCAAATTCACCCTTaGACATACGTGGCAAATTCT +
Preference number: 4 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFLQIHP*TYVANS
Trigger: AGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAG...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR GCA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTCAGCTTATCTTATCCTaGACCATTTCTATGCCTATC +
Preference number: 4 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFQLILS*TISMPI
Trigger: GATAGGCATAGAAATGGTGCAGGATAAGATAAGCTG...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS GCA 90 bp GGAGGGTGGAAGAAGACGGTGCTTGTATGCCACAGGCGGCCGAGCTaGTTTTGTGCCACTGCATTCACCTTTGGGTGGCAATGGCCAACA +
Preference number: 5 (lower is better)
Translates to: GGWKKTVLVCHRRPS*FCATAFTFGWQWPT
Trigger: TGTTGGCCATTGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 90 bp TTAGCTTGGCAGCAGTCTGGTGCACAGCTGCACTTCCTGATTGTTTaGACTGGAGAATCTCGACAGTGGCTTCCTCCCCAAGGGCCACGA +
Preference number: 5 (lower is better)
Translates to: LAWQQSGAQLHFLIV*TGESRQWLPPQGPR
Trigger: TCGTGGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTGCACCAGACTGCTGCCAAGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS CCA 90 bp AGGCTCAGGAAGAAGTGCGGCAAGCTTCTCTGCATATTCATGCATTaGAGGGTGGAAGAAGACGGTGCTTGTATGCCACAGGCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: RLRKKCGKLLCIFMH*RVEEDGACMPQAAE
Trigger: CTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCACTTCTTCCTGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 90 bp CCACTCCATGTGCCCCTGGTGGAGCAGCAGGGGTTTCTGGAAATATaGCGTCACCACAGGAGAAAGATGTTCCTTGTGGATTTCCAGGAC +
Preference number: 5 (lower is better)
Translates to: PLHVPLVEQQGFLEI*RHHRRKMFLVDFQD
Trigger: GTCCTGGAAATCCACAAGGAACATCTTTCTCCTGTGGTGACGGCATATTTCCAGAAACCCCTGCTGCTCCACCAGGGGCACATGGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 90 bp AGAAAGCCAACCCCCATGGAAGCAGATTGGAGGCCGGGCTCTAACTaGTCACTATCCTGCTGGACTTTGAGATTAAGATGGGGAGGAGGC +
Preference number: 5 (lower is better)
Translates to: RKPTPMEADWRPGSN*SLSCWTLRLRWGGG
Trigger: GCCTCCTCCCCATCTTAATCTCAAAGTCCAGCAGGATAGTGAGCAGTTAGAGCCCGGCCTCCAATCTGCTTCCATGGGGGTTGGCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS CCA 90 bp GGAAGAAGTGCGGCAAGCTTCTCTGCATATTCATGCATTGGAGGGTaGAAGAAGACGGTGCTTGTATGCCACAGGCGGCCGAGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GRSAASFSAYSCIGG*KKTVLVCHRRPSCF
Trigger: AAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCACTTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CCA 90 bp TTGGCAGCAGTCTGGTGCACAGCTGCACTTCCTGATTGTTTGCACTaGAGAATCTCGACAGTGGCTTCCTCCCCAAGGGCCACGAAAAAC +
Preference number: 5 (lower is better)
Translates to: LAAVWCTAALPDCLH*RISTVASSPRATKN
Trigger: GTTTTTCGTGGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTGCACCAGACTGCTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGGGAAGAAGACGGTGCTaGTATGCCACAGGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLGRRRC*YATGGR
Trigger: TCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCC...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS TCA 90 bp CAGCAGATCCAATGGCACAGGCCATGGGGTTCCCTCCAAAGGTGTTaGAGTGCTGCAGGCATTTCGCCAAAGATTTGGCAATCTCTGGAG +
Preference number: 5 (lower is better)
Translates to: QQIQWHRPWGSLQRC*SAAGISPKIWQSLE
Trigger: CTCCAGAGATTGCCAAATCTTTGGCGAAATGCCTGCAGCACTTCAACACCTTTGGAGGGAACCCCATGGCCTGTGCCATTGGATCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS GCA 90 bp CAAGCTTCTCTGCATATTCATGCATTGGAGGGTGGAAGAAGACGGTaGTTGTATGCCACAGGCGGCCGAGCTGCTTTTGTGCCACTGCAT +
Preference number: 5 (lower is better)
Translates to: QASLHIHALEGGRRR*LYATGGRAAFVPLH
Trigger: ATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CCA 90 bp GAGTCATTTCTCCCACTCAGAAAGCCAACCCCCATGGAAGCAGATTaGAGGCCGGGCTCTAACTGCTCACTATCCTGCTGGACTTTGAGA +
Preference number: 5 (lower is better)
Translates to: ESFLPLRKPTPMEAD*RPGSNCSLSCWTLR
Trigger: TCTCAAAGTCCAGCAGGATAGTGAGCAGTTAGAGCCCGGCCTCCAATCTGCTTCCATGGGGGTTGGCTTTCTGAGTGGGAGAAATGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR CAA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGCCACTGCATTCACCTTaGGGTGGCAATGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRPLHSP*GGNGQH
Trigger: GTGTTGGCCATTGCCACCCAAAGGTGAATGCAGTGG...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGTGGACACATTGTTGGTaGGCAACCTGTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRWTHCW*ATCPTR
Trigger: CCTGGTGGGACAGGTTGCCAACCAACAATGTGTCCA...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACATGCACACGCCTCCCCTaGCTCGCACCAGCTCAAAGG +
Preference number: 5 (lower is better)
Translates to: EILSLKNGVLKIRGALLTCTRLP*LAPAQR
Trigger: CCTTTGAGCTGGTGCGAGCAAGGGGAGGCGTGTGCA...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS TCA 90 bp GTGACAATGTCAGGCAGGACATCGTGGGTTTGGAAGCCCCAGAAGTaGGAGCCCAACCTTCCAAATCCTGTCTGCACTTCATCTGCAATG +
Preference number: 5 (lower is better)
Translates to: VTMSGRTSWVWKPQK*EPNLPNPVCTSSAM
Trigger: CATTGCAGATGAAGTGCAGACAGGATTTGGAAGGTTGGGCTCTCACTTCTGGGGCTTCCAAACCCACGATGTCCTGCCTGACATTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS TCA 90 bp CCTCTGCCAACGAGGAGTCCCATGTGCTTGCAGTCCTCATGGATCTaGTTTACTTCTTCACGGGGAAGAGGCCGACAGCTTATCTTATCC +
Preference number: 5 (lower is better)
Translates to: PLPTRSPMCLQSSWI*FTSSRGRGRQLILS
Trigger: GGATAAGATAAGCTGTCGGCCTCTTCCCCGTGAAGAAGTAAATCAGATCCATGAGGACTGCAAGCACATGGGACTCCTCGTTGGCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000512135.5
ENST00000618015.4
CDS GCA 90 bp TCTGCATATTCATGCATTGGAGGGTGGAAGAAGACGGTGCTTGTATaGCACAGGCGGCCGAGCTGCTTTTGTGCCACTGCATTCACCTTT +
Preference number: 5 (lower is better)
Translates to: SAYSCIGGWKKTVLV*HRRPSCFCATAFTF
Trigger: AAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 90 bp TTAAGAGGCTCAGGAAGAAGTGCGGCAAGCTTCTCTGCATATTCATaGATTGGAGGGTGGAAGAAGACGGTGCTTGTATGCCACAGGCGG +
Preference number: 5 (lower is better)
Translates to: LRGSGRSAASFSAYS*IGGWKKTVLVCHRR
Trigger: CCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCACTTCTTCCTGAGCCTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 90 bp GATCCAATGGCACAGGCCATGGGGTTCCCTCCAAAGGTGTTGAAGTaGTGCAGGCATTTCGCCAAAGATTTGGCAATCTCTGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: DPMAQAMGFPPKVLK*CRHFAKDLAISGVV
Trigger: AACCACTCCAGAGATTGCCAAATCTTTGGCGAAATGCCTGCAGCACTTCAACACCTTTGGAGGGAACCCCATGGCCTGTGCCATTGGATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS-3UTR CAA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGTGCACACGCCTCCCCTaGCTCGCACCAGCTCAAAGG +
Preference number: 5 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQCTRLP*LAPAQR
Trigger: CCTTTGAGCTGGTGCGAGCAAGGGGAGGCGTGTGCA...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS CCA 90 bp GCACAGCTGCACTTCCTGATTGTTTGCACTGGAGAATCTCGACAGTaGCTTCCTCCCCAAGGGCCACGAAAAACATCTGGACACATTGTT +
Preference number: 5 (lower is better)
Translates to: AQLHFLIVCTGESRQ*LPPQGPRKTSGHIV
Trigger: AACAATGTGTCCAGATGTTTTTCGTGGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAGCGGCCGAGCTGCTTTaGTGCCACTGCATTCACCTT +
Preference number: 5 (lower is better)
Translates to: EILSLKNGVLKIRGALLTAAELL*CHCIHL
Trigger: AAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGC...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGGGAAGAAGACGGTGCTaGTATGCCACAGGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQGRRRC*YATGGR
Trigger: TCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCC...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGCTGCATATTCATGCATaGGAGGGTGGAAGAAGACGG +
Preference number: 5 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRLHIHA*EGGRRR
Trigger: CCGTCTTCTTCCACCCTCCAATGCATGAATATGCAG...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGGAAATGATGTCTATGTaGTTTGAGTGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: MVGRQSTMTFTAPVESCREMMSM*FECALA
Trigger: GGCCAGGGCGCACTCAAACAACATAGACATCATTTC...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGCATCTGGACACATTGTaGGTTGGCAACCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLHLDTL*VGNLSH
Trigger: GTGGGACAGGTTGCCAACCAACAATGTGTCCAGATG...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCTGCACACGCCTCCCCTaGCTCGCACCAGCTCAAAGG +
Preference number: 5 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGCTRLP*LAPAQR
Trigger: CCTTTGAGCTGGTGCGAGCAAGGGGAGGCGTGTGCA...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CAA 90 bp ATGGTTGGTAGGCAGTCAACCATGACTTTTACAGCTCCTGTGGAGAGCTGCAGGATACTGATCTTTAGCTaGGCAGCAGTCTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: MVGRQSTMTFTAPVESCRILIFS*AAVWCT
Trigger: TGTGCACCAGACTGCTGCCAAGCTAAAGATCAGTAT...CCTGCAGCTCTCCACAGGAGCTGTAAAAGTCATGGTTGACTGCCTACCAACCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp TCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGAATCCAGCAATTGACTaGGCCACAGATGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: SIHLPTSPKRVVLMTTSRNPAID*ATDVLS
Trigger: GCTGAGCACATCTGTGGCCAAGTCAATTGCTGGATT...CCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGGAAGAAGACGGTGCTaGTATGCCACAGGCGGCCGA +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFGRRRC*YATGGR
Trigger: TCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGTGGACACATTGTTGGTaGGCAACCTGTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQWTHCW*ATCPTR
Trigger: CCTGGTGGGACAGGTTGCCAACCAACAATGTGTCCA...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGGCACTTCCTGATTGTTaGCACTGGAGAATCTCGACA +
Preference number: 5 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLALPDC*HWRIST
Trigger: TGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGC...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGAATCCAGCAATTGACTaGGCCACAGATGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPNPAID*ATDVLS
Trigger: GCTGAGCACATCTGTGGCCAAGTCAATTGCTGGATT...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGCAGGACATCGTGGGTTaGGAAGCCCCAGAAGTGAGA +
Preference number: 5 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQQDIVG*EAPEVR
Trigger: TCTCACTTCTGGGGCTTCCAAACCCACGATGTCCTG...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS TCA 90 bp TATCTTTCAGGCATGAAGTCACATGGAGGCATTCTGGGCTTTGTATaGAGACTGAGCTTGGTTACTGATGTCCGGGAAGTACCTAGGCTC +
Preference number: 5 (lower is better)
Translates to: YLSGMKSHGGILGFV*RLSLVTDVREVPRL
Trigger: GAGCCTAGGTACTTCCCGGACATCAGTAACCAAGCTCAGTCTTCATACAAAGCCCAGAATGCCTCCATGTGACTTCATGCCTGAAAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS TCA 90 bp TTGGCCACAGATGTGCTCAGCGTATCTTTGAATTGCTCAATATACTaGTCTTTAGCTTGGCAGCAGTCTGGTGCACAGCTGCACTTCCTG +
Preference number: 5 (lower is better)
Translates to: LATDVLSVSLNCSIY*SLAWQQSGAQLHFL
Trigger: CAGGAAGTGCAGCTGTGCACCAGACTGCTGCCAAGCTAAAGATCAGTATATTGAGCAATTCAAAGATACGCTGAGCACATCTGTGGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS CCA 90 bp ACCCAGCAGTCTTTAAAGAAACAAGAGAAAAATCTCCAAACTCACTaGTTGGCAACCTGTCCCACCAGGGAGTTCCATCTTGTAGGTCCC +
Preference number: 5 (lower is better)
Translates to: TQQSLKKQEKNLQTH*LATCPTREFHLVGP
Trigger: GGGACCTACAAGATGGAACTCCCTGGTGGGACAGGTTGCCAACCAGTGAGTTTGGAGATTTTTCTCTTGTTTCTTTAAAGACTGCTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505542.1
CDS-3UTR CAA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCCCACTGCATTCACCTTaGGGTGGCAATGGCCAACAC +
Preference number: 5 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGPLHSP*GGNGQH
Trigger: GTGTTGGCCATTGCCACCCAAAGGTGAATGCAGTGG...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGCGGCCGAGCTGCTTTaGTGCCACTGCATTCACCTT +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFAAELL*CHCIHL
Trigger: AAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACACTGCATATTCATGCATaGGAGGGTGGAAGAAGACGG +
Preference number: 5 (lower is better)
Translates to: EILSLKNGVLKIRGALLTLHIHA*EGGRRR
Trigger: CCGTCTTCTTCCACCCTCCAATGCATGAATATGCAG...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGTGTAGGTCCCTACGTTaGTCAAGCCAAGTGTGTAAG +
Preference number: 5 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPCRSLR*SSQVCK
Trigger: CTTACACACTTGGCTTGACAAACGTAGGGACCTACA...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCTGGACACATTGTTGGTaGGCAACCTGTCCCACCAGG +
Preference number: 5 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGWTHCW*ATCPTR
Trigger: CCTGGTGGGACAGGTTGCCAACCAACAATGTGTCCA...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CAA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGCATCTGGACACATTGTaGGTTGGCAACCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQHLDTL*VGNLSH
Trigger: GTGGGACAGGTTGCCAACCAACAATGTGTCCAGATG...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp TTCCATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGACATCACTAAGCACTaGGCTTCCATCCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: FHPSSNLTKKGCPHDYKPDITKH*ASIHLP
Trigger: TGGAAGATGGATGGAAGCCAAGTGCTTAGTGATGTC...CGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS TCA 90 bp GAGGCCGACAGCTTATCTTATCCTGCACCATTTCTATGCCTATCATaGGACCTTTGCCTCGGACGTCTCCAACAATTTCAAATTCATCCC +
Preference number: 5 (lower is better)
Translates to: EADSLSYPAPFLCLS*DLCLGRLQQFQIHP
Trigger: GGGATGAATTTGAAATTGTTGGAGACGTCCGAGGCAAAGGTCTCATGATAGGCATAGAAATGGTGCAGGATAAGATAAGCTGTCGGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000512135.5
ENST00000618015.4
CDS-3UTR CAA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACACTATCCTGCTGGACTTaGAGATTAAGATGGGGAGGA +
Preference number: 5 (lower is better)
Translates to: EILSLKNGVLKIRGALLTLSCWT*RLRWGG
Trigger: TCCTCCCCATCTTAATCTCAAAGTCCAGCAGGATAG...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS-3UTR CAA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCGGAGAAAGATGTTCCTaGTGGATTTCCAGGACACGG +
Preference number: 5 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGGERCS*WISRTR
Trigger: CCGTGTCCTGGAAATCCACAAGGAACATCTTTCTCC...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CAA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTGCGGCCGAGCTGCTTTaGTGCCACTGCATTCACCTT +
Preference number: 5 (lower is better)
Translates to: KFFKFTLEHTWQILETCGAAELL*CHCIHL
Trigger: AAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGC...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCGAAATGATGTCTATGTaGTTTGAGTGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGEMMSM*FECALA
Trigger: GGCCAGGGCGCACTCAAACAACATAGACATCATTTC...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCATCTGGACACATTGTaGGTTGGCAACCTGTCCCAC +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFHLDTL*VGNLSH
Trigger: GTGGGACAGGTTGCCAACCAACAATGTGTCCAGATG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp ATCCATCTTCCAACCTCACCAAAAAGGGTTGTCCTCATGACTACAAGCCGGCTGAACTCCATTCACACCTaGAATAGGTTCTGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: IHLPTSPKRVVLMTTSRLNSIHT*NRFCEK
Trigger: TTTTTCGCAGAACCTATTCAAGGTGTGAATGGAGTT...CAGCCGGCTTGTAGTCATGAGGACAACCCTTTTTGGTGAGGTTGGAAGATGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp GAGATCCTTTCCCTGAAGAATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACACATTTCGCCAAAGATTaGGCAATCTCTGGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: EILSLKNGVLKIRGALLTHFAKD*AISGVV
Trigger: AACCACTCCAGAGATTGCCAAATCTTTGGCGAAATG...TGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATTCTTCAGGGAAAGGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000231420.11
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCCTATCATGAGACCTTaGCCTCGGACGTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFPIMRP*PRTSPT
Trigger: TGTTGGAGACGTCCGAGGCAAAGGTCTCATGATAGG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp AATGGAGTTCTCAAGATAAGAGGGGCTCTGCTAACAAATATGGTTGGTAGGCAGGACATCACTAAGCACTaGGCTTCCATCCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: NGVLKIRGALLTNMVGRQDITKH*ASIHLP
Trigger: TGGAAGATGGATGGAAGCCAAGTGCTTAGTGATGTC...CTGCCTACCAACCATATTTGTTAGCAGAGCCCCTCTTATCTTGAGAACTCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGGAGAAAGATGTTCCTaGTGGATTTCCAGGACACGG +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFGERCS*WISRTR
Trigger: CCGTGTCCTGGAAATCCACAAGGAACATCTTTCTCC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCTGCATATTCATGCATaGGAGGGTGGAAGAAGACGG +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFLHIHA*EGGRRR
Trigger: CCGTCTTCTTCCACCCTCCAATGCATGAATATGCAG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCTGTAGGTCCCTACGTTaGTCAAGCCAAGTGTGTAAG +
Preference number: 5 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGCRSLR*SSQVCK
Trigger: CTTACACACTTGGCTTGACAAACGTAGGGACCTACA...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CAA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCGCACTTCCTGATTGTTaGCACTGGAGAATCTCGACA +
Preference number: 5 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGALPDC*HWRIST
Trigger: TGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGC...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CAA 90 bp AAACTTTCCCTGAAGGCACCTCCACCAAAAGATTTTTCTTCAAGATTCAGTGGCATACTGATCTTTAGCTaGGCAGCAGTCTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: KLSLKAPPPKDFSSRFSGILIFS*AAVWCT
Trigger: TGTGCACCAGACTGCTGCCAAGCTAAAGATCAGTAT...GCCACTGAATCTTGAAGAAAAATCTTTTGGTGGAGGTGCCTTCAGGGAAAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510428.1
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTAATCCAGCAATTGACTaGGCCACAGATGTGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFNPAID*ATDVLS
Trigger: GCTGAGCACATCTGTGGCCAAGTCAATTGCTGGATT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp AGAACAATGAATTTATTACCTCAAATATCAAGAGGCCCTGAGGTAGGGTGGCTCCCTTTAGAAACCCCTTaGGGTACTGGACAACTCCAT +
Preference number: 5 (lower is better)
Translates to: RTMNLLPQISRGPEVGWLPLETP*GTGQLH
Trigger: ATGGAGTTGTCCAGTACCCAAAGGGGTTTCTAAAGG...GAGCCACCCTACCTCAGGGCCTCTTGATATTTGAGGTAATAAATTCATTGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS GCA 90 bp CCCTCTACAAAGGAAACTGATTTCAATGTTAGCCTGGAAACAGCTTaGTCAAGGGTGCAGTGGGTAAGGGCATCTGAAAGAATAAGAATA +
Preference number: 5 (lower is better)
Translates to: PSTKETDFNVSLETA*SRVQWVRASERIRI
Trigger: TATTCTTATTCTTTCAGATGCCCTTACCCACTGCACCCTTGAGCAAGCTGTTTCCAGGCTAACATTGAAATCAGTTTCCTTTGTAGAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505542.1
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTGCACTTCCTGATTGTTaGCACTGGAGAATCTCGACA +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFALPDC*HWRIST
Trigger: TGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGC...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCGAAAAATCCAGCAATaGACTTGGCCACAGATGTGC +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFRKIQQ*TWPQMC
Trigger: GCACATCTGTGGCCAAGTCAATTGCTGGATTTTTCG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTCCTTTAGAAACCCCTTaGGGTACTGGACAACTCCAT +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFPLETP*GTGQLH
Trigger: ATGGAGTTGTCCAGTACCCAAAGGGGTTTCTAAAGG...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTCCTATCATGAGACCTTaGCCTCGGACGTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: KFFKFTLEHTWQILETCGPIMRP*PRTSPT
Trigger: TGTTGGAGACGTCCGAGGCAAAGGTCTCATGATAGG...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS TCA 90 bp AACTCCATTCACACCTTGAATAGGTTCTGCGAAAAATCCAGCAATTaGCTTGGCCACAGATGTGCTCAGCGTATCTTTGAATTGCTCAAT +
Preference number: 5 (lower is better)
Translates to: NSIHTLNRFCEKSSN*LGHRCAQRIFELLN
Trigger: ATTGAGCAATTCAAAGATACGCTGAGCACATCTGTGGCCAAGTCAATTGCTGGATTTTTCGCAGAACCTATTCAAGGTGTGAATGGAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS-3UTR CAA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTGGAGAAAGATGTTCCTaGTGGATTTCCAGGACACGG +
Preference number: 5 (lower is better)
Translates to: KFFKFTLEHTWQILETCGGERCS*WISRTR
Trigger: CCGTGTCCTGGAAATCCACAAGGAACATCTTTCTCC...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp TTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTCCTATCATGAGACCTTaGCCTCGGACGTCTCCAACA +
Preference number: 5 (lower is better)
Translates to: FKFTLEHTWQILETCGFIPIMRP*PRTSPT
Trigger: TGTTGGAGACGTCCGAGGCAAAGGTCTCATGATAGG...AATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS CCA 90 bp AATTATTACTCAGACTCGGAAGGCCTTTCTAATGGTGTCCTCAAGTaGTCTCCAATTCAATTAGGTCAAATTGAGCCCCTGATTAATGAC +
Preference number: 5 (lower is better)
Translates to: NYYSDSEGLSNGVLK*SPIQLGQIEPLIND
Trigger: GTCATTAATCAGGGGCTCAATTTGACCTAATTGAATTGGAGACCACTTGAGGACACCATTAGAAAGGCCTTCCGAGTCTGAGTAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505542.1
CDS-3UTR CAA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCGAAATGATGTCTATGTaGTTTGAGTGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: IHHIFMHKPITAKGNQITEMMSM*FECALA
Trigger: GGCCAGGGCGCACTCAAACAACATAGACATCATTTC...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp AAATTCTTCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTGTAGGTCCCTACGTTaGTCAAGCCAAGTGTGTAAG +
Preference number: 5 (lower is better)
Translates to: KFFKFTLEHTWQILETCGCRSLR*SSQVCK
Trigger: CTTACACACTTGGCTTGACAAACGTAGGGACCTACA...ACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGAAGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS CCA 90 bp ACTGATTTCAATGTTAGCCTGGAAACAGCTTGCTCAAGGGTGCAGTaGGTAAGGGCATCTGAAAGAATAAGAATAATTAGGTATCTGATT +
Preference number: 5 (lower is better)
Translates to: TDFNVSLETACSRVQ*VRASERIRIIRYLI
Trigger: AATCAGATACCTAATTATTCTTATTCTTTCAGATGCCCTTACCCACTGCACCCTTGAGCAAGCTGTTTCCAGGCTAACATTGAAATCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505542.1
CDS-3UTR CAA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTATACTGATCTTTAGCTaGGCAGCAGTCTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFILIFS*AAVWCT
Trigger: TGTGCACCAGACTGCTGCCAAGCTAAAGATCAGTAT...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp ATACATCACATATTCATGCATAAACCAATCACTGCAAAGGGGAATCAAATTACCCGAAAAATCCAGCAATaGACTTGGCCACAGATGTGC +
Preference number: 5 (lower is better)
Translates to: IHHIFMHKPITAKGNQITRKIQQ*TWPQMC
Trigger: GCACATCTGTGGCCAAGTCAATTGCTGGATTTTTCG...GGTAATTTGATTCCCCTTTGCAGTGATTGGTTTATGCATGAATATGTGATGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS-3UTR CAA 90 bp CGCAACAAGAAGACATCTCTTCTTGAACTGAAGAGTGAGGGTGAAGAAAACTTTAACTCCATTCACACCTaGAATAGGTTCTGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: RNKKTSLLELKSEGEENFNSIHT*NRFCEK
Trigger: TTTTTCGCAGAACCTATTCAAGGTGTGAATGGAGTT...AAAGTTTTCTTCACCCTCACTCTTCAGTTCAAGAAGAGATGTCTTCTTGTTGCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS GCA 90 bp GTGGGAACAGAAGGTGAGTACAGTGATGACTGCATAGAAGTTTTGTaGATTCAAGATTCTCAGAGCCTTGCAGTTTACTTGATTTTATTT +
Preference number: 5 (lower is better)
Translates to: VGTEGEYSDDCIEVL*IQDSQSLAVYLILF
Trigger: AAATAAAATCAAGTAAACTGCAAGGCTCTGAGAATCTTGAATGCACAAAACTTCTATGCAGTCATCACTGTACTCACCTTCTGTTCCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505542.1
CDS-3UTR CAA 90 bp TCAAATTCACCCTTGAACATACGTGGCAAATTCTTGAGACTTGTGGTTTTATTTAACTCCATTCACACCTaGAATAGGTTCTGCGAAAAA +
Preference number: 5 (lower is better)
Translates to: SNSPLNIRGKFLRLVVLFNSIHT*NRFCEK
Trigger: TTTTTCGCAGAACCTATTCAAGGTGTGAATGGAGTT...AAATAAAACCACAAGTCTCAAGAATTTGCCACGTATGTTCAAGGGTGAATTTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000231420.11
ENST00000618015.4
CDS TCA 90 bp ATGACAGGCTTTATATTAGTTTCTAATCCTTATACCAGGAAAACCTaGTCAACTACTTCACATACCCAGCAGTCTTTAAAGAAACAAGAG +
Preference number: 5 (lower is better)
Translates to: MTGFILVSNPYTRKT*STTSHTQQSLKKQE
Trigger: CTCTTGTTTCTTTAAAGACTGCTGGGTATGTGAAGTAGTTGATCAGGTTTTCCTGGTATAAGGATTAGAAACTAATATAAAGCCTGTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505542.1
CDS CAA 72 bp GACGGTGCTTGTATGCCACAGGCGGCCGAGCTGCTTTaGTGCCACTGCATTCACCTTTGGGTGGCAATGGCC +
Preference number: 6 (lower is better)
Translates to: DGACMPQAAELL*CHCIHLWVAMA
Trigger: GGCCATTGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp GGTGCTTGTATGCCACAGGCGGCCGAGCTGCTTTTGTaGCACTGCATTCACCTTTGGGTGGCAATGGCCAAC +
Preference number: 6 (lower is better)
Translates to: GACMPQAAELLL*HCIHLWVAMAN
Trigger: GTTGGCCATTGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CCA 72 bp CTCCCACTCAGAAAGCCAACCCCCATGGAAGCAGATTaGAGGCCGGGCTCTAACTGCTCACTATCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: LPLRKPTPMEAD*RPGSNCSLSCW
Trigger: CCAGCAGGATAGTGAGCAGTTAGAGCCCGGCCTCCAATCTGCTTCCATGGGGGTTGGCTTTCTGAGTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS CAA 90 bp GTGGAAGAAGACGGTGCTTGTATGCCACAGGCGGCCGAGCTGCTTTaGTGCCACTGCATTCACCTTTGGGTGGCAATGGCCAACACTGAC +
Preference number: 6 (lower is better)
Translates to: VEEDGACMPQAAELL*CHCIHLWVAMANTD
Trigger: GTCAGTGTTGGCCATTGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp TGTATGCCACAGGCGGCCGAGCTGCTTTTGTGCCACTaGATTCACCTTTGGGTGGCAATGGCCAACACTGAC +
Preference number: 6 (lower is better)
Translates to: CMPQAAELLLCH*IHLWVAMANTD
Trigger: GTCAGTGTTGGCCATTGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp TCATGCATTGGAGGGTGGAAGAAGACGGTGCTTGTATaGCACAGGCGGCCGAGCTGCTTTTGTGCCACTGCA +
Preference number: 6 (lower is better)
Translates to: SCIGGWKKTVLV*HRRPSCFCATA
Trigger: TGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CCA 72 bp GCGGCAAGCTTCTCTGCATATTCATGCATTGGAGGGTaGAAGAAGACGGTGCTTGTATGCCACAGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: AASFSAYSCIGG*KKTVLVCHRRP
Trigger: CGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CCA 72 bp GTCTGGTGCACAGCTGCACTTCCTGATTGTTTGCACTaGAGAATCTCGACAGTGGCTTCCTCCCCAAGGGCC +
Preference number: 6 (lower is better)
Translates to: VWCTAALPDCLH*RISTVASSPRA
Trigger: GGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTGCACCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS CAA 90 bp GAGGCTCAGGAAGAAGTGCGGCAAGCTTCTCTGCATATTCATGCATaGGAGGGTGGAAGAAGACGGTGCTTGTATGCCACAGGCGGCCGA +
Preference number: 6 (lower is better)
Translates to: EAQEEVRQASLHIHA*EGGRRRCLYATGGR
Trigger: TCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCACTTCTTCCTGAGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CAA 90 bp TTTAGCTTGGCAGCAGTCTGGTGCACAGCTGCACTTCCTGATTGTTaGCACTGGAGAATCTCGACAGTGGCTTCCTCCCCAAGGGCCACG +
Preference number: 6 (lower is better)
Translates to: FSLAAVWCTAALPDC*HWRISTVASSPRAT
Trigger: CGTGGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTGCACCAGACTGCTGCCAAGCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp AAGAAGACGGTGCTTGTATGCCACAGGCGGCCGAGCTaGTTTTGTGCCACTGCATTCACCTTTGGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: KKTVLVCHRRPS*FCATAFTFGWQ
Trigger: TTGCCACCCAAAGGTGAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp GCAGATTGGAGGCCGGGCTCTAACTGCTCACTATCCTaGTGGACTTTGAGATTAAGATGGGGAGGAGGCGCT +
Preference number: 6 (lower is better)
Translates to: ADWRPGSNCSLS*WTLRLRWGGGA
Trigger: AGCGCCTCCTCCCCATCTTAATCTCAAAGTCCAGCAGGATAGTGAGCAGTTAGAGCCCGGCCTCCAATCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS CCA 72 bp CTTCCTTCAGCATCAAAGAGCCACTCCATGTGCCCCTaGTGGAGCAGCAGGGGTTTCTGGAAATATGCCGTC +
Preference number: 6 (lower is better)
Translates to: LPSASKSHSMCP*WSSRGFWKYAV
Trigger: GACGGCATATTTCCAGAAACCCCTGCTGCTCCACCAGGGGCACATGGAGTGGCTCTTTGATGCTGAAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CCA 72 bp ACAGTGGCTTCCTCCCCAAGGGCCACGAAAAACATCTaGACACATTGTTGGTTGGCAACCTGTCCCACCAGG +
Preference number: 6 (lower is better)
Translates to: TVASSPRATKNI*THCWLATCPTR
Trigger: CCTGGTGGGACAGGTTGCCAACCAACAATGTGTCCAGATGTTTTTCGTGGCCCTTGGGGAGGAAGCCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS CAA 72 bp GCAGCAGTCTGGTGCACAGCTGCACTTCCTGATTGTTaGCACTGGAGAATCTCGACAGTGGCTTCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: AAVWCTAALPDC*HWRISTVASSP
Trigger: TGGGGAGGAAGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTGCACCAGACTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS CAA 90 bp GGCAACCTGTCCCACCAGGGAGTTCCATCTTGTAGGTCCCTACGTTaGTCAAGCCAAGTGTGTAAGGACTGCATCCATGGTAGGCTCCTC +
Preference number: 6 (lower is better)
Translates to: GNLSHQGVPSCRSLR*SSQVCKDCIHGRLL
Trigger: GAGGAGCCTACCATGGATGCAGTCCTTACACACTTGGCTTGACAAACGTAGGGACCTACAAGATGGAACTCCCTGGTGGGACAGGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp GTGCCCCTGGTGGAGCAGCAGGGGTTTCTGGAAATATaGCGTCACCACAGGAGAAAGATGTTCCTTGTGGAT +
Preference number: 6 (lower is better)
Translates to: VPLVEQQGFLEI*RHHRRKMFLVD
Trigger: ATCCACAAGGAACATCTTTCTCCTGTGGTGACGGCATATTTCCAGAAACCCCTGCTGCTCCACCAGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp CAGCAGTCTGGTGCACAGCTGCACTTCCTGATTGTTTaGACTGGAGAATCTCGACAGTGGCTTCCTCCCCAA +
Preference number: 6 (lower is better)
Translates to: QQSGAQLHFLIV*TGESRQWLPPQ
Trigger: TTGGGGAGGAAGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTGCAGCTGTGCACCAGACTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS CAA 72 bp CTGTCTGCACTTCATCTGCAATGCACACGCCTCCCCTaGCTCGCACCAGCTCAAAGGCTTCCTTTAGAAACC +
Preference number: 6 (lower is better)
Translates to: LSALHLQCTRLP*LAPAQRLPLET
Trigger: GGTTTCTAAAGGAAGCCTTTGAGCTGGTGCGAGCAAGGGGAGGCGTGTGCATTGCAGATGAAGTGCAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS CAA 72 bp AGCCATGGTGACAATGTCAGGCAGGACATCGTGGGTTaGGAAGCCCCAGAAGTGAGAGCCCAACCTTCCAAA +
Preference number: 6 (lower is better)
Translates to: SHGDNVRQDIVG*EAPEVRAQPSK
Trigger: TTTGGAAGGTTGGGCTCTCACTTCTGGGGCTTCCAAACCCACGATGTCCTGCCTGACATTGTCACCATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS CAA 90 bp GCTTCTCTGCATATTCATGCATTGGAGGGTGGAAGAAGACGGTGCTaGTATGCCACAGGCGGCCGAGCTGCTTTTGTGCCACTGCATTCA +
Preference number: 6 (lower is better)
Translates to: ASLHIHALEGGRRRC*YATGGRAAFVPLHS
Trigger: TGAATGCAGTGGCACAAAAGCAGCTCGGCCGCCTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp GCACAGGCCATGGGGTTCCCTCCAAAGGTGTTGAAGTaGTGCAGGCATTTCGCCAAAGATTTGGCAATCTCT +
Preference number: 6 (lower is better)
Translates to: AQAMGFPPKVLK*CRHFAKDLAIS
Trigger: AGAGATTGCCAAATCTTTGGCGAAATGCCTGCAGCACTTCAACACCTTTGGAGGGAACCCCATGGCCTGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS GCA 72 bp ACCCCCATGGAAGCAGATTGGAGGCCGGGCTCTAACTaGTCACTATCCTGCTGGACTTTGAGATTAAGATGG +
Preference number: 6 (lower is better)
Translates to: TPMEADWRPGSN*SLSCWTLRLRW
Trigger: CCATCTTAATCTCAAAGTCCAGCAGGATAGTGAGCAGTTAGAGCCCGGCCTCCAATCTGCTTCCATGGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS CCA 72 bp GATTGGAGGCCGGGCTCTAACTGCTCACTATCCTGCTaGACTTTGAGATTAAGATGGGGAGGAGGCGCTAAA +
Preference number: 6 (lower is better)
Translates to: DWRPGSNCSLSC*TLRLRWGGGAK
Trigger: TTTAGCGCCTCCTCCCCATCTTAATCTCAAAGTCCAGCAGGATAGTGAGCAGTTAGAGCCCGGCCTCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS CAA 90 bp TTCCAAATCCTGTCTGCACTTCATCTGCAATGCACACGCCTCCCCTaGCTCGCACCAGCTCAAAGGCTTCCTTTAGAAACCCCTTTGGGT +
Preference number: 6 (lower is better)
Translates to: FQILSALHLQCTRLP*LAPAQRLPLETPLG
Trigger: ACCCAAAGGGGTTTCTAAAGGAAGCCTTTGAGCTGGTGCGAGCAAGGGGAGGCGTGTGCATTGCAGATGAAGTGCAGACAGGATTTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS CAA 90 bp AATCCCTTTAGCCATGGTGACAATGTCAGGCAGGACATCGTGGGTTaGGAAGCCCCAGAAGTGAGAGCCCAACCTTCCAAATCCTGTCTG +
Preference number: 6 (lower is better)
Translates to: NPFSHGDNVRQDIVG*EAPEVRAQPSKSCL
Trigger: CAGACAGGATTTGGAAGGTTGGGCTCTCACTTCTGGGGCTTCCAAACCCACGATGTCCTGCCTGACATTGTCACCATGGCTAAAGGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS GCA 72 bp AAATGCTGCCTCTGCCAACGAGGAGTCCCATGTGCTTaGAGTCCTCATGGATCTGATTTACTTCTTCACGGG +
Preference number: 6 (lower is better)
Translates to: KCCLCQRGVPCA*SPHGSDLLLHG
Trigger: CCCGTGAAGAAGTAAATCAGATCCATGAGGACTGCAAGCACATGGGACTCCTCGTTGGCAGAGGCAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000512135.5
ENST00000618015.4
CDS CCA 72 bp CACTTCCTGATTGTTTGCACTGGAGAATCTCGACAGTaGCTTCCTCCCCAAGGGCCACGAAAAACATCTGGA +
Preference number: 6 (lower is better)
Translates to: HFLIVCTGESRQ*LPPQGPRKTSG
Trigger: TCCAGATGTTTTTCGTGGCCCTTGGGGAGGAAGCCACTGTCGAGATTCTCCAGTGCAAACAATCAGGAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS CCA 72 bp AACTGCTCACTATCCTGCTGGACTTTGAGATTAAGATaGGGAGGAGGCGCTAAAAGGGGAATCCTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: NCSLSCWTLRLR*GGGAKRGILEW
Trigger: CCACTCCAGGATTCCCCTTTTAGCGCCTCCTCCCCATCTTAATCTCAAAGTCCAGCAGGATAGTGAGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618015.4
CDS CAA 72 bp TCCCACCAGGGAGTTCCATCTTGTAGGTCCCTACGTTaGTCAAGCCAAGTGTGTAAGGACTGCATCCATGGT +
Preference number: 6 (lower is better)
Translates to: SHQGVPSCRSLR*SSQVCKDCIHG
Trigger: ACCATGGATGCAGTCCTTACACACTTGGCTTGACAAACGTAGGGACCTACAAGATGGAACTCCCTGGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS TCA 72 bp AGTCACATGGAGGCATTCTGGGCTTTGTATGAAGACTaGGCTTGGTTACTGATGTCCGGGAAGTACCTAGGC +
Preference number: 6 (lower is better)
Translates to: SHMEAFWALYED*AWLLMSGKYLG
Trigger: GCCTAGGTACTTCCCGGACATCAGTAACCAAGCTCAGTCTTCATACAAAGCCCAGAATGCCTCCATGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp TCAGGAAGAAGTGCGGCAAGCTTCTCTGCATATTCATaGATTGGAGGGTGGAAGAAGACGGTGCTTGTATGC +
Preference number: 6 (lower is better)
Translates to: SGRSAASFSAYS*IGGWKKTVLVC
Trigger: GCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCACTTCTTCCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CCA 72 bp AAGAAGTGCGGCAAGCTTCTCTGCATATTCATGCATTaGAGGGTGGAAGAAGACGGTGCTTGTATGCCACAG +
Preference number: 6 (lower is better)
Translates to: KKCGKLLCIFMH*RVEEDGACMPQ
Trigger: CTGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CAA 72 bp GAAGAAGTGCGGCAAGCTTCTCTGCATATTCATGCATaGGAGGGTGGAAGAAGACGGTGCTTGTATGCCACA +
Preference number: 6 (lower is better)
Translates to: EEVRQASLHIHA*EGGRRRCLYAT
Trigger: TGTGGCATACAAGCACCGTCTTCTTCCACCCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCACTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS CAA 72 bp CTCGCACCAGCTCAAAGGCTTCCTTTAGAAACCCCTTaGGGTACTGGACAACTCCATTCACACCCTGCAAAA +
Preference number: 6 (lower is better)
Translates to: LAPAQRLPLETP*GTGQLHSHPAK
Trigger: TTTTGCAGGGTGTGAATGGAGTTGTCCAGTACCCAAAGGGGTTTCTAAAGGAAGCCTTTGAGCTGGTGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512135.5
CDS TCA 72 bp CACGGTTGTAGCCAAGGGACTGGTATCTTTCAGGCATaGAGTCACATGGAGGCATTCTGGGCTTTGTATGAA +
Preference number: 6 (lower is better)
Translates to: HGCSQGTGIFQA*SHMEAFWALYE
Trigger: TTCATACAAAGCCCAGAATGCCTCCATGTGACTTCATGCCTGAAAGATACCAGTCCCTTGGCTACAACCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS CCA 72 bp GCCAAGGGACTGGTATCTTTCAGGCATGAAGTCACATaGAGGCATTCTGGGCTTTGTATGAAGACTGAGCTT +
Preference number: 6 (lower is better)
Translates to: AKGLVSFRHEVT*RHSGLCMKTEL
Trigger: AAGCTCAGTCTTCATACAAAGCCCAGAATGCCTCCATGTGACTTCATGCCTGAAAGATACCAGTCCCTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp CACCAAGAAAATGACCTTAAGAGGCTCAGGAAGAAGTaGGGCAAGCTTCTCTGCATATTCATGCATTGGAGG +
Preference number: 6 (lower is better)
Translates to: HQENDLKRLRKK*GKLLCIFMHWR
Trigger: CCTCCAATGCATGAATATGCAGAGAAGCTTGCCGCACTTCTTCCTGAGCCTCTTAAGGTCATTTTCTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000505542.1
ENST00000510428.1
ENST00000618015.4
CDS GCA 72 bp CAAAGATTTGGCAATCTCTGGAGTGGTTATGACTGCTaGCATGGGAAAGCCATTCCCAATCCCTTTAGCCAT +
Preference number: 6 (lower is better)
Translates to: QRFGNLWSGYDC*HGKAIPNPFSH
Trigger: ATGGCTAAAGGGATTGGGAATGGCTTTCCCATGGCAGCAGTCATAACCACTCCAGAGATTGCCAAATCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000505349.1
ENST00000512135.5
CDS GCA 72 bp AAGGAAACTGATTTCAATGTTAGCCTGGAAACAGCTTaGTCAAGGGTGCAGTGGGTAAGGGCATCTGAAAGA +
Preference number: 6 (lower is better)
Translates to: KETDFNVSLETA*SRVQWVRASER
Trigger: TCTTTCAGATGCCCTTACCCACTGCACCCTTGAGCAAGCTGTTTCCAGGCTAACATTGAAATCAGTTTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505542.1
CDS CAA 90 bp CAGCTTATCTTATCCTGCACCATTTCTATGCCTATCATGAGACCTTaGCCTCGGACGTCTCCAACAATTTCAAATTCATCCCGCAGCTTA +
Preference number: 6 (lower is better)
Translates to: QLILSCTISMPIMRP*PRTSPTISNSSRSL
Trigger: TAAGCTGCGGGATGAATTTGAAATTGTTGGAGACGTCCGAGGCAAAGGTCTCATGATAGGCATAGAAATGGTGCAGGATAAGATAAGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000512135.5
ENST00000618015.4
CDS TCA 72 bp CACACCTTGAATAGGTTCTGCGAAAAATCCAGCAATTaGCTTGGCCACAGATGTGCTCAGCGTATCTTTGAA +
Preference number: 6 (lower is better)
Translates to: HTLNRFCEKSSN*LGHRCAQRIFE
Trigger: TTCAAAGATACGCTGAGCACATCTGTGGCCAAGTCAATTGCTGGATTTTTCGCAGAACCTATTCAAGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000618015.4
CDS TCA 72 bp AGCTTATCTTATCCTGCACCATTTCTATGCCTATCATaGGACCTTTGCCTCGGACGTCTCCAACAATTTCAA +
Preference number: 6 (lower is better)
Translates to: SLSYPAPFLCLS*DLCLGRLQQFQ
Trigger: TTGAAATTGTTGGAGACGTCCGAGGCAAAGGTCTCATGATAGGCATAGAAATGGTGCAGGATAAGATAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000512135.5
ENST00000618015.4
CDS CCA 72 bp AATGTTAGCCTGGAAACAGCTTGCTCAAGGGTGCAGTaGGTAAGGGCATCTGAAAGAATAAGAATAATTAGG +
Preference number: 6 (lower is better)
Translates to: NVSLETACSRVQ*VRASERIRIIR
Trigger: CCTAATTATTCTTATTCTTTCAGATGCCCTTACCCACTGCACCCTTGAGCAAGCTGTTTCCAGGCTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505542.1
CDS CAA 72 bp TTATCCTGCACCATTTCTATGCCTATCATGAGACCTTaGCCTCGGACGTCTCCAACAATTTCAAATTCATCC +
Preference number: 6 (lower is better)
Translates to: LSCTISMPIMRP*PRTSPTISNSS
Trigger: GGATGAATTTGAAATTGTTGGAGACGTCCGAGGCAAAGGTCTCATGATAGGCATAGAAATGGTGCAGGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000231420.11
ENST00000510428.1
ENST00000512135.5
ENST00000618015.4