Pregenerated sensors for AGTR2 (Homo sapiens)
Ensembl gene IDs: ENSG00000180772Ensembl transcript IDs: ENST00000371906.5, ENST00000680409.1, ENST00000681852.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCAACTTAGAAGTGCTCATCTCTCTTACAATGTTGTCTTGTAAATaGTGCAATGAGTTGAAAGACTGGTTCTGGTTCAAGAGGAAATCC | + |
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Preference number: 1 (lower is better) Translates to: LNLEVLISLTMLSCK*CNELKDWFWFKRKS Trigger: GGATTTCCTCTTGAACCAGAACCAGTCTTTCAACTCATTGCATCATTTACAAGACAACATTGTAAGAGAGATGAGCACTTCTAAGTTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTACAATGGGCAATTCCTaGAAGTCACTGGACGATAAA | + |
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Preference number: 2 (lower is better) Translates to: LAEMLSPQNVSSASEISITMGNS*KSLDDK Trigger: TTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGT...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR-3UTR TCA 90 bp | TTCCGCCTCAGAGATCAGTATTTAGACCTACCTCAGAGGAAGGTCCTAGATAACCACATTGTACTGCCCTaGCAGGTTCCTTTCTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: FRLRDQYLDLPQRKVLDNHIVLP*QVPFLV Trigger: TACCAAGAAAGGAACCTGTCAGGGCAGTACAATGTG...GTTATCTAGGACCTTCCTCTGAGGTAGGTCTAAATACTGATCTCTGAGGCGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTAAAGTCACATTGTACTaGCCTGACAGGTTCCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LAEMLSPQNVSSASEISIKVTLY*PDRFLS Trigger: AGAAAGGAACCTGTCAGGGCAGTACAATGTGACTTT...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTGGATACCATTTCCTATaGCAGTTAAGGGTTTATTAC | + |
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Preference number: 2 (lower is better) Translates to: LAEMLSPQNVSSASEISIGYHFL*QLRVYY Trigger: GTAATAAACCCTTAACTGGCATAGGAAATGGTATCC...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR-3UTR CCA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCAATGAGTTGAAAGACTaGTTCTGGTTCAAGAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CTALTGSFLGTKHVIDWVNELKD*FWFKRK Trigger: TTTCCTCTTGAACCAGAACCAGTCTTTCAACTCATT...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR-3UTR CCA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCATTCCTGAAAGTCACTaGACGATAAAACATAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: CTALTGSFLGTKHVIDWVIPESH*TIKHSY Trigger: GTAACTATGTTTTATCGTCCAGTGACTTTCAGGAAT...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR TCA 72 bp | CCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTaGCTGGGTCTCTTTGCCCCCACCCAGACCCCATGT | + |
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Preference number: 3 (lower is better) Translates to: PDRFLSWYQTCN*LGLFAPTQTPC Trigger: ACATGGGGTCTGGGTGGGGGCAAAGAGACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR TCA 72 bp | TCTTCTGTCTATAATCCTGGAACCTGGCAGAGATGCTaGGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCA | + |
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Preference number: 3 (lower is better) Translates to: SSVYNPGTWQRC*VPKTLVPPQRS Trigger: TGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAGGTTCCAGGATTATAGACAGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR TCA 72 bp | GATTACATGAAATTAGGACTTTTCCAGAAAGTGGTATaGCAGGACTCTTCTGTCTATAATCCTGGAACCTGG | + |
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Preference number: 3 (lower is better) Translates to: DYMKLGLFQKVV*QDSSVYNPGTW Trigger: CCAGGTTCCAGGATTATAGACAGAAGAGTCCTGTCATACCACTTTCTGGAAAAGTCCTAATTTCATGTAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| 3UTR CCA 72 bp | ATATCAGAAAAACAATGGGCAATTCCTGAAAGTCACTaGACGATAAAACATAGTTACATTTGGTTTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: ISEKQWAIPESH*TIKHSYIWFQK Trigger: CTTCTGAAACCAAATGTAACTATGTTTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGTTTTTCTGATAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR TCA 90 bp | ACCAAACATGTAATTGACTGGGTCTCTTTGCCCCCACCCAGACCCCATGTAGCACACATTGTACTGCCCTaGCAGGTTCCTTTCTTGGTA | + |
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Preference number: 4 (lower is better) Translates to: TKHVIDWVSLPPPRPHVAHIVLP*QVPFLV Trigger: TACCAAGAAAGGAACCTGTCAGGGCAGTACAATGTG...TGCTACATGGGGTCTGGGTGGGGGCAAAGAGACCCAGTCAATTACATGTTTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTCAGAACAACAGCAGCTaGCATCTTCAGGACTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: LAEMLSPQNVSSASEISIQNNSS*HLQDLV Trigger: GACCAAGTCCTGAAGATGGCAGCTGCTGTTGTTCTG...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTATCCCAGCTGACCATTaGGCATATTTCTCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LAEMLSPQNVSSASEISIIPADH*AYFSGG Trigger: CCCACCTGAGAAATATGCCCAATGGTCAGCTGGGAT...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR TCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTTACCAAACATGTAATTaGCTGGGTCTCTTTGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: LAEMLSPQNVSSASEISIYQTCN*LGLFAP Trigger: GGGGGCAAAGAGACCCAGTCAATTACATGTTTGGTA...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTCTGCGGAGCTTCTGTTaGAACCGGTTTCCAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: LAEMLSPQNVSSASEISILRSFC*NRFPTK Trigger: TTTTGTTGGAAACCGGTTCCAACAGAAGCTCCGCAG...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR TCA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCACCTGGCAGAGATGCTaGGTCCCCAAAACGTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: CTALTGSFLGTKHVIDWVTWQRC*VPKTLV Trigger: AACTAACGTTTTGGGGACTCAGCATCTCTGCCAGGT...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | CTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCTCTTTGCCCGCCATCTTCAGGACTTaGTCACGGGTTATCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: LTGSFLGTKHVIDWVSLPAIFRT*SRVILF Trigger: GAACAGGATAACCCGTGACCAAGTCCTGAAGATGGC...GGGCAAAGAGACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR TCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTTTCCAGAAAGTGGTATaGCAGGACTCTTCTGTCTAT | + |
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Preference number: 4 (lower is better) Translates to: LAEMLSPQNVSSASEISIFQKVV*QDSSVY Trigger: ATAGACAGAAGAGTCCTGTCATACCACTTTCTGGAA...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCAAACATGTAATTGACTaGGTCTCTTTGCCCCCACCC | + |
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Preference number: 4 (lower is better) Translates to: CTALTGSFLGTKHVIDWVKHVID*VSLPPP Trigger: GGGTGGGGGCAAAGAGACCCAGTCAATTACATGTTT...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR TCA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCGGCTGCAGAATGCTTTaGATTCTGTGCTTACTCGTT | + |
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Preference number: 4 (lower is better) Translates to: CTALTGSFLGTKHVIDWVGCRML*ILCLLV Trigger: AACGAGTAAGCACAGAATTCAAAGCATTCTGCAGCC...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTATTCAGGCTGCAGAATaGTTTGAATTCTGTGCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LAEMLSPQNVSSASEISIIQAAE*FEFCAY Trigger: GTAAGCACAGAATTCAAAGCATTCTGCAGCCTGAAT...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | ACCAAACATGTAATTGACTGGGTCTCTTTGCCCCCACCCAGACCCCATGTAGCAAATGAGTTGAAAGACTaGTTCTGGTTCAAGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TKHVIDWVSLPPPRPHVANELKD*FWFKRK Trigger: TTTCCTCTTGAACCAGAACCAGTCTTTCAACTCATT...TGCTACATGGGGTCTGGGTGGGGGCAAAGAGACCCAGTCAATTACATGTTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | ACCAAACATGTAATTGACTGGGTCTCTTTGCCCCCACCCAGACCCCATGTAGCAGGAATTGCATCTAAATaGTTATCTGATGGTTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TKHVIDWVSLPPPRPHVAGIASK*LSDGFC Trigger: ACAGAAACCATCAGATAAGCATTTAGATGCAATTCC...TGCTACATGGGGTCTGGGTGGGGGCAAAGAGACCCAGTCAATTACATGTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | CTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCTCTTTGCCCGACTTTTCCAGAAAGTaGTATGACAGGACTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LTGSFLGTKHVIDWVSLPDFSRK*YDRTLL Trigger: CAGAAGAGTCCTGTCATACCACTTTCTGGAAAAGTC...GGGCAAAGAGACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR TCA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCATAAAATGTTGGCAATaGGGACAAACAGGCCATACA | + |
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Preference number: 4 (lower is better) Translates to: CTALTGSFLGTKHVIDWVIKCWQ*GQTGHT Trigger: TGTATGGCCTGTTTGTCCTCATTGCCAACATTTTAT...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | CTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCTCTTTGCCCGGGAACTATATAAGATaGTTGCCAGGGATTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: LTGSFLGTKHVIDWVSLPGNYIR*LPGISS Trigger: AGAAGAAATCCCTGGCAAGCATCTTATATAGTTCCC...GGGCAAAGAGACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | CTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCTCTTTGCCCAAGAACCAAAAACTTTaGACATCACAGGTCCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: LTGSFLGTKHVIDWVSLPKNQKL*TSQVQR Trigger: TCTTTGGACCTGTGATGTGCAAAGTTTTTGGTTCTT...GGGCAAAGAGACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCGCCATGTTGATTACATaGATTTTGCTCTCACGTTTA | + |
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Preference number: 4 (lower is better) Translates to: CTALTGSFLGTKHVIDWVAMLIT*ILLSRL Trigger: TAAACGTGAGAGCAAAATGCATGTAATCAACATGGC...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCGGATACCATTTCCTATaGCAGTTAAGGGTTTATTAC | + |
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Preference number: 4 (lower is better) Translates to: CTALTGSFLGTKHVIDWVGYHFL*QLRVYY Trigger: GTAATAAACCCTTAACTGGCATAGGAAATGGTATCC...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | TATATTTTCAAAGTCACATTGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAACTCTCTCTTTTCCCTTaGAGCCAAGTAATTGGAACC | + |
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Preference number: 4 (lower is better) Translates to: YIFKVTLYCPDRFLSWYQLSLFP*SQVIGT Trigger: GGTTCCAATTACTTGGCTCCAAGGGAAAAGAGAGAG...TTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACAATGTGACTTTGAAAATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | AAACAATGGGCAATTCCTGAAAGTCACTGGACGATAAAACATAGTTACATTTGGTGCCAGGTCAATGACTaGTATAACTTCGCAGCTATT | + |
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Preference number: 4 (lower is better) Translates to: KQWAIPESHWTIKHSYIWCQVND*YNFAAI Trigger: AATAGCTGCGAAGTTATAGCAGTCATTGACCTGGCA...CCAAATGTAACTATGTTTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR GCA 90 bp | AAACAATGGGCAATTCCTGAAAGTCACTGGACGATAAAACATAGTTACATTTGGAAAGTCACATTGTACTaGCCTGACAGGTTCCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KQWAIPESHWTIKHSYIWKVTLY*PDRFLS Trigger: AGAAAGGAACCTGTCAGGGCAGTACAATGTGACTTT...CCAAATGTAACTATGTTTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | TTAAAAATAATTCTGGTGAGCCTCAAAGCAAGTAGCCATGTTGATTACATGCATTTGGAGCCAAGTAATTaGAACCCTAAACACACTGCG | + |
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Preference number: 4 (lower is better) Translates to: LKIILVSLKASSHVDYMHLEPSN*NPKHTA Trigger: CGCAGTGTGTTTAGGGTTCCAATTACTTGGCTCCAA...ATGCATGTAATCAACATGGCTACTTGCTTTGAGGCTCACCAGAATTATTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR TCA 90 bp | ATATCAGAAAAACAATGGGCAATTCCTGAAAGTCACTGGACGATAAAACATAGTACAGAAAGGGGTAGATaGCAGATTGGTACCTATCAA | + |
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Preference number: 4 (lower is better) Translates to: ISEKQWAIPESHWTIKHSTERGR*QIGTYQ Trigger: TTGATAGGTACCAATCTGTCATCTACCCCTTTCTGT...ACTATGTTTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGTTTTTCTGATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CCA 90 bp | TTAAAAATAATTCTGGTGAGCCTCAAAGCAAGTAGCCATGTTGATTACATGCATATTCCTGAAAGTCACTaGACGATAAAACATAGTTAC | + |
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Preference number: 4 (lower is better) Translates to: LKIILVSLKASSHVDYMHIPESH*TIKHSY Trigger: GTAACTATGTTTTATCGTCCAGTGACTTTCAGGAAT...ATGCATGTAATCAACATGGCTACTTGCTTTGAGGCTCACCAGAATTATTTTTAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | ACCAAACATGTAATTGACTGGGTCTCTTTGCCCCCACCCAGACCCCATGTAGCAACTGCGGAGCTTCTGTaGGAACCGGTTTCCAACAAA | + |
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Preference number: 5 (lower is better) Translates to: TKHVIDWVSLPPPRPHVATAELL*EPVSNK Trigger: TTTGTTGGAAACCGGTTCCAACAGAAGCTCCGCAGT...TGCTACATGGGGTCTGGGTGGGGGCAAAGAGACCCAGTCAATTACATGTTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS GCA 90 bp | ATGGAAGGGAAGCCAGCAAATGATGAAGGCCAGAACAACAGCAGCTaGCATCTTCAGGACTTGGTCACGGGTTATCCTGTTCTTCCCATA | + |
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Preference number: 5 (lower is better) Translates to: MEGKPANDEGQNNSS*HLQDLVTGYPVLPI Trigger: TATGGGAAGAACAGGATAACCCGTGACCAAGTCCTGAAGATGGCAGCTGCTGTTGTTCTGGCCTTCATCATTTGCTGGCTTCCCTTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CCA 90 bp | TTTCCGGCAAGACATACTCTCTCTTTTCCCTTGGAGCCAAGTAATTaGAACCCTAAACACACTGCGGAGCTTCTGTTGGAACCGGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: FPARHTLSFPLEPSN*NPKHTAELLLEPVS Trigger: GGAAACCGGTTCCAACAGAAGCTCCGCAGTGTGTTTAGGGTTCCAATTACTTGGCTCCAAGGGAAAAGAGAGAGTATGTCTTGCCGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS-3UTR CAA 90 bp | CTGGCAGAGATGCTGAGTCCCCAAAACGTTAGTTCCGCCTCAGAGATCAGTATTGTGGCAAGGGTGGAGTaGCCCTTCATATTGAAATGT | + |
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Preference number: 5 (lower is better) Translates to: LAEMLSPQNVSSASEISIVARVE*PFILKC Trigger: ACATTTCAATATGAAGGGCAACTCCACCCTTGCCAC...AATACTGATCTCTGAGGCGGAACTAACGTTTTGGGGACTCAGCATCTCTGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS TCA 90 bp | TTCAAGGTAGACTCATTGTTGCCAGAGATGTTCACAAGCCCGAAGTaGAGACCGCTGGTAATGTTTTTGCTAGTAGTGGCAAGGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: FKVDSLLPEMFTSPK*RPLVMFLLVVARVE Trigger: CTCCACCCTTGCCACTACTAGCAAAAACATTACCAGCGGTCTTCACTTCGGGCTTGTGAACATCTCTGGCAACAATGAGTCTACCTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS-3UTR CAA 90 bp | TTCCGCCTCAGAGATCAGTATTTAGACCTACCTCAGAGGAAGGTCCTAGATAACCCGCTGGTAATGTTTTaGCTAGTAGTGGCAAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: FRLRDQYLDLPQRKVLDNPLVMF*LVVARV Trigger: CACCCTTGCCACTACTAGCAAAAACATTACCAGCGG...GTTATCTAGGACCTTCCTCTGAGGTAGGTCTAAATACTGATCTCTGAGGCGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | TTCCGCCTCAGAGATCAGTATTTAGACCTACCTCAGAGGAAGGTCCTAGATAACTGCCATCTTCAGGACTaGGTCACGGGTTATCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: FRLRDQYLDLPQRKVLDNCHLQD*VTGYPV Trigger: AACAGGATAACCCGTGACCAAGTCCTGAAGATGGCA...GTTATCTAGGACCTTCCTCTGAGGTAGGTCTAAATACTGATCTCTGAGGCGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS CCA 90 bp | CTAAGAGAACTGCTTTTCCGGCAAGACATACTCTCTCTTTTCCCTTaGAGCCAAGTAATTGGAACCCTAAACACACTGCGGAGCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: LRELLFRQDILSLFP*SQVIGTLNTLRSFC Trigger: ACAGAAGCTCCGCAGTGTGTTTAGGGTTCCAATTACTTGGCTCCAAGGGAAAAGAGAGAGTATGTCTTGCCGGAAAAGCAGTTCTCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CCA 90 bp | TGGAGCCAAGTAATTGGAACCCTAAACACACTGCGGAGCTTCTGTTaGAACCGGTTTCCAACAAAACAATACAGAAACGGATTAACGCAG | + |
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Preference number: 5 (lower is better) Translates to: WSQVIGTLNTLRSFC*NRFPTKQYRNGLTQ Trigger: CTGCGTTAATCCGTTTCTGTATTGTTTTGTTGGAAACCGGTTCCAACAGAAGCTCCGCAGTGTGTTTAGGGTTCCAATTACTTGGCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS-3UTR CAA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCTTCAAGGTAGACTCATaGTTGCCAGAGATGTTCACA | + |
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Preference number: 5 (lower is better) Translates to: CTALTGSFLGTKHVIDWVFKVDS*LPEMFT Trigger: TGTGAACATCTCTGGCAACAATGAGTCTACCTTGAA...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | TGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAACATGTAATTGACTGGGTCCTTTTTAGGACCCTTTaGACAACAAAACAGTGTAAC | + |
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Preference number: 5 (lower is better) Translates to: CTALTGSFLGTKHVIDWVLFRTL*TTKQCN Trigger: GTTACACTGTTTTGTTGTCAAAAGGGTCCTAAAAAG...GACCCAGTCAATTACATGTTTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | TTAAAAATAATTCTGGTGAGCCTCAAAGCAAGTAGCCATGTTGATTACATGCATGGATTAACGCAGCTGTaGGTGAATCCCAAGAGGATG | + |
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Preference number: 5 (lower is better) Translates to: LKIILVSLKASSHVDYMHGLTQL*VNPKRM Trigger: CATCCTCTTGGGATTCACCAACAGCTGCGTTAATCC...ATGCATGTAATCAACATGGCTACTTGCTTTGAGGCTCACCAGAATTATTTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | AAACAATGGGCAATTCCTGAAAGTCACTGGACGATAAAACATAGTTACATTTGGAGGCTGCAGAATGCTTaGAATTCTGTGCTTACTCGT | + |
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Preference number: 5 (lower is better) Translates to: KQWAIPESHWTIKHSYIWRLQNA*NSVLTR Trigger: ACGAGTAAGCACAGAATTCAAAGCATTCTGCAGCCT...CCAAATGTAACTATGTTTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | AAACAATGGGCAATTCCTGAAAGTCACTGGACGATAAAACATAGTTACATTTGGTCAGCCACAGCGAGGTaGAAGATGTATATGCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: KQWAIPESHWTIKHSYIWSATAR*KMYMLE Trigger: TTCTAGCATATACATCTTCAACCTCGCTGTGGCTGA...CCAAATGTAACTATGTTTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | AAACAATGGGCAATTCCTGAAAGTCACTGGACGATAAAACATAGTTACATTTGGACTCTCTCTTTTCCCTaGGAGCCAAGTAATTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: KQWAIPESHWTIKHSYIWTLSFP*EPSNWN Trigger: GTTCCAATTACTTGGCTCCAAGGGAAAAGAGAGAGT...CCAAATGTAACTATGTTTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | TTAAAAATAATTCTGGTGAGCCTCAAAGCAAGTAGCCATGTTGATTACATGCATAAGGTAGACTCATTGTaGCCAGAGATGTTCACAAGC | + |
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Preference number: 5 (lower is better) Translates to: LKIILVSLKASSHVDYMHKVDSL*PEMFTS Trigger: GCTTGTGAACATCTCTGGCAACAATGAGTCTACCTT...ATGCATGTAATCAACATGGCTACTTGCTTTGAGGCTCACCAGAATTATTTTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | TATATTTTCAAAGTCACATTGTACTGCCCTGACAGGTTCCTTTCTTGGTACCAAGTAACCACGACAATATaGACCAGAAATCCAATTACA | + |
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Preference number: 5 (lower is better) Translates to: YIFKVTLYCPDRFLSWYQVTTTI*TRNPIT Trigger: TGTAATTGGATTTCTGGTCAATATTGTCGTGGTTAC...TTGGTACCAAGAAAGGAACCTGTCAGGGCAGTACAATGTGACTTTGAAAATATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | TTAAAAATAATTCTGGTGAGCCTCAAAGCAAGTAGCCATGTTGATTACATGCATAAGCAAGTAGCCATGTaGATTACATGCATTTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LKIILVSLKASSHVDYMHKQVAM*ITCILL Trigger: GAGCAAAATGCATGTAATCAACATGGCTACTTGCTT...ATGCATGTAATCAACATGGCTACTTGCTTTGAGGCTCACCAGAATTATTTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS-3UTR CAA 90 bp | ATATCAGAAAAACAATGGGCAATTCCTGAAAGTCACTGGACGATAAAACATAGTAACTATATAAGATGCTaGCCAGGGATTTCTTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: ISEKQWAIPESHWTIKHSNYIRC*PGISSL Trigger: CAAAGAAGAAATCCCTGGCAAGCATCTTATATAGTT...ACTATGTTTTATCGTCCAGTGACTTTCAGGAATTGCCCATTGTTTTTCTGATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS GCA 72 bp | AAGCCAGCAAATGATGAAGGCCAGAACAACAGCAGCTaGCATCTTCAGGACTTGGTCACGGGTTATCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: KPANDEGQNNSS*HLQDLVTGYPV Trigger: AACAGGATAACCCGTGACCAAGTCCTGAAGATGGCAGCTGCTGTTGTTCTGGCCTTCATCATTTGCTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 72 bp | GAAGGCCAGAACAACAGCAGCTGCCATCTTCAGGACTaGGTCACGGGTTATCCTGTTCTTCCCATAGCTATT | + |
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Preference number: 6 (lower is better) Translates to: EGQNNSSCHLQD*VTGYPVLPIAI Trigger: AATAGCTATGGGAAGAACAGGATAACCCGTGACCAAGTCCTGAAGATGGCAGCTGCTGTTGTTCTGGCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 90 bp | GCAAATGATGAAGGCCAGAACAACAGCAGCTGCCATCTTCAGGACTaGGTCACGGGTTATCCTGTTCTTCCCATAGCTATTCGTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ANDEGQNNSSCHLQD*VTGYPVLPIAIRLQ Trigger: CTGAAGACGAATAGCTATGGGAAGAACAGGATAACCCGTGACCAAGTCCTGAAGATGGCAGCTGCTGTTGTTCTGGCCTTCATCATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 90 bp | TCTAAGAGAACTGCTTTTCCGGCAAGACATACTCTCTCTTTTCCCTaGGAGCCAAGTAATTGGAACCCTAAACACACTGCGGAGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SKRTAFPARHTLSFP*EPSNWNPKHTAELL Trigger: CAGAAGCTCCGCAGTGTGTTTAGGGTTCCAATTACTTGGCTCCAAGGGAAAAGAGAGAGTATGTCTTGCCGGAAAAGCAGTTCTCTTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS TCA 72 bp | GACTCATTGTTGCCAGAGATGTTCACAAGCCCGAAGTaGAGACCGCTGGTAATGTTTTTGCTAGTAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: DSLLPEMFTSPK*RPLVMFLLVVA Trigger: TGCCACTACTAGCAAAAACATTACCAGCGGTCTTCACTTCGGGCTTGTGAACATCTCTGGCAACAATGAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CCA 72 bp | AGACATACTCTCTCTTTTCCCTTGGAGCCAAGTAATTaGAACCCTAAACACACTGCGGAGCTTCTGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: RHTLSFPLEPSN*NPKHTAELLLE Trigger: TTCCAACAGAAGCTCCGCAGTGTGTTTAGGGTTCCAATTACTTGGCTCCAAGGGAAAAGAGAGAGTATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 72 bp | TTGCTAGTAGTGGCAAGGGTGGAGTTGCCCTTCATATaGAAATGTCAGCAGCTCCTAGTTCTTATGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LLVVARVELPFI*KCQQLLVLMPL Trigger: CAAAGGCATAAGAACTAGGAGCTGCTGACATTTCAATATGAAGGGCAACTCCACCCTTGCCACTACTAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS CAA 72 bp | CCAACAAAACAATACAGAAACGGATTAACGCAGCTGTaGGTGAATCCCAAGAGGATGGCAAAAGGAAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PTKQYRNGLTQL*VNPKRMAKGSA Trigger: GGCACTTCCTTTTGCCATCCTCTTGGGATTCACCAACAGCTGCGTTAATCCGTTTCTGTATTGTTTTGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 72 bp | TTGCTAGTAGTGGCAAGGGTGGAGTTGCCCTTCATATaGAAATGTCAGCAGCTCCTAGTTCTTATGCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLVVARVELPFI*KCQQLLVLMPS Trigger: AGAAGGCATAAGAACTAGGAGCTGCTGACATTTCAATATGAAGGGCAACTCCACCCTTGCCACTACTAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 90 bp | GGACAAACAGGCCATACACCAAACAAGGGGAACTATATAAGATGCTaGCCAGGGATTTCTTCTTTGAGACAGAAAGGGGTAGATGACAGA | + |
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Preference number: 6 (lower is better) Translates to: GQTGHTPNKGNYIRC*PGISSLRQKGVDDR Trigger: TCTGTCATCTACCCCTTTCTGTCTCAAAGAAGAAATCCCTGGCAAGCATCTTATATAGTTCCCCTTGTTTGGTGTATGGCCTGTTTGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 90 bp | TTGGAGCCAAGTAATTGGAACCCTAAACACACTGCGGAGCTTCTGTaGGAACCGGTTTCCAACAAAACAATACAGAAACGGATTAACGCA | + |
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Preference number: 6 (lower is better) Translates to: LEPSNWNPKHTAELL*EPVSNKTIQKRINA Trigger: TGCGTTAATCCGTTTCTGTATTGTTTTGTTGGAAACCGGTTCCAACAGAAGCTCCGCAGTGTGTTTAGGGTTCCAATTACTTGGCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS GCA 72 bp | ACAGGCCATACACCAAACAAGGGGAACTATATAAGATaGTTGCCAGGGATTTCTTCTTTGAGACAGAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: TGHTPNKGNYIR*LPGISSLRQKG Trigger: CCCTTTCTGTCTCAAAGAAGAAATCCCTGGCAAGCATCTTATATAGTTCCCCTTGTTTGGTGTATGGCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CCA 72 bp | GTAATTGGAACCCTAAACACACTGCGGAGCTTCTGTTaGAACCGGTTTCCAACAAAACAATACAGAAACGGA | + |
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Preference number: 6 (lower is better) Translates to: VIGTLNTLRSFC*NRFPTKQYRNG Trigger: TCCGTTTCTGTATTGTTTTGTTGGAAACCGGTTCCAACAGAAGCTCCGCAGTGTGTTTAGGGTTCCAATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 72 bp | AAACACACTCCTTCAAAATTCAGGCTGCAGAATGCTTaGAATTCTGTGCTTACTCGTTCTCTCAGACGCTGG | + |
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Preference number: 6 (lower is better) Translates to: KHTPSKFRLQNA*NSVLTRSLRRW Trigger: CCAGCGTCTGAGAGAACGAGTAAGCACAGAATTCAAAGCATTCTGCAGCCTGAATTTTGAAGGAGTGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS CAA 72 bp | CTGGTAATGTTTTTGCTAGTAGTGGCAAGGGTGGAGTaGCCCTTCATATTGAAATGTCAGCAGCTCCTAGTT | + |
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Preference number: 6 (lower is better) Translates to: LVMFLLVVARVE*PFILKCQQLLV Trigger: AACTAGGAGCTGCTGACATTTCAATATGAAGGGCAACTCCACCCTTGCCACTACTAGCAAAAACATTACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 72 bp | GGCCATACACCAAACAAGGGGAACTATATAAGATGCTaGCCAGGGATTTCTTCTTTGAGACAGAAAGGGGTA | + |
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Preference number: 6 (lower is better) Translates to: GHTPNKGNYIRC*PGISSLRQKGV Trigger: TACCCCTTTCTGTCTCAAAGAAGAAATCCCTGGCAAGCATCTTATATAGTTCCCCTTGTTTGGTGTATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 72 bp | AGTAATTGGAACCCTAAACACACTGCGGAGCTTCTGTaGGAACCGGTTTCCAACAAAACAATACAGAAACGG | + |
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Preference number: 6 (lower is better) Translates to: SNWNPKHTAELL*EPVSNKTIQKR Trigger: CCGTTTCTGTATTGTTTTGTTGGAAACCGGTTCCAACAGAAGCTCCGCAGTGTGTTTAGGGTTCCAATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 72 bp | CTTATGCCTTCTTCAAAATTCAGGCTGCAGAATGCTTaGAATTCTGTGCTTACTCGTTCTCTCAGACGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LMPSSKFRLQNA*NSVLTRSLRRW Trigger: CCAGCGTCTGAGAGAACGAGTAAGCACAGAATTCAAAGCATTCTGCAGCCTGAATTTTGAAGAAGGCATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000681852.1 |
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| CDS CAA 90 bp | TTAGTGCCTAAACACACTCCTTCAAAATTCAGGCTGCAGAATGCTTaGAATTCTGTGCTTACTCGTTCTCTCAGACGCTGGGACGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: LVPKHTPSKFRLQNA*NSVLTRSLRRWDVI Trigger: TATTACGTCCCAGCGTCTGAGAGAACGAGTAAGCACAGAATTCAAAGCATTCTGCAGCCTGAATTTTGAAGGAGTGTGTTTAGGCACTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS CAA 90 bp | GTAATGTTTTTGCTAGTAGTGGCAAGGGTGGAGTTGCCCTTCATATaGAAATGTCAGCAGCTCCTAGTTCTTATGCCTTCTGTGGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: VMFLLVVARVELPFI*KCQQLLVLMPSVEK Trigger: TTTCTCCACAGAAGGCATAAGAACTAGGAGCTGCTGACATTTCAATATGAAGGGCAACTCCACCCTTGCCACTACTAGCAAAAACATTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000680409.1 |
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| CDS CAA 90 bp | GTAATGTTTTTGCTAGTAGTGGCAAGGGTGGAGTTGCCCTTCATATaGAAATGTCAGCAGCTCCTAGTTCTTATGCCTTTGGTTGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VMFLLVVARVELPFI*KCQQLLVLMPLVVE Trigger: TTCAACAACCAAAGGCATAAGAACTAGGAGCTGCTGACATTTCAATATGAAGGGCAACTCCACCCTTGCCACTACTAGCAAAAACATTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000371906.5 |
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| CDS CAA 90 bp | CCAAACAAGGGGAACTATATAAGATGCTTGCCAGGGATTTCTTCTTaGAGACAGAAAGGGGTAGATGACAGATTGGTACCTATCAACACT | + |
|
Preference number: 6 (lower is better) Translates to: PNKGNYIRCLPGISS*RQKGVDDRLVPINT Trigger: AGTGTTGATAGGTACCAATCTGTCATCTACCCCTTTCTGTCTCAAAGAAGAAATCCCTGGCAAGCATCTTATATAGTTCCCCTTGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 90 bp | GTAATGTTTTTGCTAGTAGTGGCAAGGGTGGAGTTGCCCTTCATATaGAAATGTCAGCAGCTCCTAGTTCTTATGCCTTCTTCAAAATTC | + |
|
Preference number: 6 (lower is better) Translates to: VMFLLVVARVELPFI*KCQQLLVLMPSSKF Trigger: GAATTTTGAAGAAGGCATAAGAACTAGGAGCTGCTGACATTTCAATATGAAGGGCAACTCCACCCTTGCCACTACTAGCAAAAACATTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000681852.1 |
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| CDS CAA 90 bp | AGCGAGGTTGAAGATGTATATGCTAGAAACCTTTTTAGGACCCTTTaGACAACAAAACAGTGTAACCACGACAATATTGACCAGAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: SEVEDVYARNLFRTL*TTKQCNHDNIDQKS Trigger: GGATTTCTGGTCAATATTGTCGTGGTTACACTGTTTTGTTGTCAAAAGGGTCCTAAAAAGGTTTCTAGCATATACATCTTCAACCTCGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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| CDS CAA 72 bp | GAAGATGTATATGCTAGAAACCTTTTTAGGACCCTTTaGACAACAAAACAGTGTAACCACGACAATATTGAC | + |
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Preference number: 6 (lower is better) Translates to: EDVYARNLFRTL*TTKQCNHDNID Trigger: GTCAATATTGTCGTGGTTACACTGTTTTGTTGTCAAAAGGGTCCTAAAAAGGTTTCTAGCATATACATCTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000371906.5 ENST00000680409.1 ENST00000681852.1 |
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