Pregenerated sensors for AGRP (Homo sapiens)
Ensembl gene IDs: ENSG00000159723Ensembl transcript IDs: ENST00000290953.3
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | CCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGCCGCAGGCCCAGGCCTaGGAGCTCTGGGAGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PILYSSFLAPTLAPTLTLPQAQA*ELWEQG Trigger: GCCCTGCTCCCAGAGCTCCCAGGCCTGGGCCTGCGG...CAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR TCA 90 bp | TGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACCCTTACGCAGCGACGTaGGGAGCGGGGCTCGCGGTC | + |
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Preference number: 4 (lower is better) Translates to: WSHPLFEFPCPYPSPDPDPYAAT*GAGLAV Trigger: GACCGCGAGCCCCGCTCCTCACGTCGCTGCGTAAGG...GTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CCA 90 bp | CATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCGGGGCCAAGCCCATCTaGGCTCCTCGCGTGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HPLFEFPCPYPSPDPDVGGAKPI*APRVAG Trigger: GCCTGCCACGCGAGGAGCCCAGATGGGCTTGGCCCC...GCCAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR TCA 90 bp | CCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGCCTGGTCAGGCCTTCTaGTGCCCTCCATGGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PILYSSFLAPTLAPTLTLPGQAF*CPPWGP Trigger: TGGCCCCCATGGAGGGCATCAGAAGGCCTGACCAGG...CAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | CCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGCGGGGCTCGCGGTCCTaGAGGTCTAGTACCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PILYSSFLAPTLAPTLTLRGSRS*RSSTSA Trigger: GGCAGAGGTACTAGACCTGCAGGACCGCGAGCCCCG...CAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CCA 90 bp | GTTGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGCCGCTGCGGTCAGCATaGCCTCTGCCTCCGGGATTC | + |
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Preference number: 4 (lower is better) Translates to: VGPILYSSFLAPTLAPTLPLRSA*PLPPGF Trigger: GAATCCCGGAGGCAGAGGCCATGCTGACCGCAGCGG...CAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CCA 90 bp | GTTGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGTCTGGGCTCCTCGCGTaGCAGGCAGTGCCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VGPILYSSFLAPTLAPTLSGLLA*QAVPAA Trigger: TGCTGCTGGCACTGCCTGCCACGCGAGGAGCCCAGA...CAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | GTTGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACAGCTCAGCACCGCTaGGGTCAGCATGGCCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VGPILYSSFLAPTLAPTLTAQHR*GQHGLC Trigger: GCAGAGGCCATGCTGACCGCAGCGGTGCTGAGCTGT...CAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | TCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTTCGCGTGGCAGGCAGTaGCAGCAGCAGGGCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SHPLFEFPCPYPSPDPDVSRGRQ*QQQGTA Trigger: AGCTGTGCCCTGCTGCTGGCACTGCCTGCCACGCGA...AACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | GGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGCGTTGGCCAGCTAGGTaGGGCTGCAGGGATTCATGG | + |
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Preference number: 4 (lower is better) Translates to: GPILYSSFLAPTLAPTLTRWPAR*GCRDSW Trigger: CCATGAATCCCTGCAGCCGCACCTAGCTGGCCAACG...CGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CCA 90 bp | ATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCCTCTGGGAGCAGGGCCTaGTCAGGCCTTCTGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: ILYSSFLAPTLAPTLTLASGSRA*SGLLMP Trigger: GGGCATCAGAAGGCCTGACCAGGCCCTGCTCCCAGA...GGCCAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CCA 90 bp | TGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACAGTTGTCTTCTTCAGTaGGGCCCGCAGGCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: WSHPLFEFPCPYPSPDPDSCLLQ*GPQAQA Trigger: GGCCTGGGCCTGCGGGCCCCACTGAAGAAGACAACT...GTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | TGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACCCCAGGCAGGACTCATaGAGCCTTACGCAGCGACGT | + |
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Preference number: 4 (lower is better) Translates to: WSHPLFEFPCPYPSPDPDPRQDS*SLTQRR Trigger: ACGTCGCTGCGTAAGGCTGCATGAGTCCTGCCTGGG...GTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CCA 90 bp | CCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCCAGGTAGCACGTGGCACATaGGTCACAGCAAGGCACCTG | + |
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Preference number: 4 (lower is better) Translates to: PLFEFPCPYPSPDPDVGQVARGT*VTARHL Trigger: CAGGTGCCTTGCTGTGACCCATGTGCCACGTGCTAC...CTGGCCAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CCA 90 bp | CCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCCAGAGCGGCAGTAGCACGTaGCACATGGGTCACAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PLFEFPCPYPSPDPDVGQSGSST*HMGHSK Trigger: CTTGCTGTGACCCATGTGCCACGTGCTACTGCCGCT...CTGGCCAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR TCA 90 bp | TCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTACCTCTGCCAAGGCCTaGGCCTCCTGCAACAGATCC | + |
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Preference number: 4 (lower is better) Translates to: SHPLFEFPCPYPSPDPDVTSAKA*ASCNRS Trigger: GGATCTGTTGCAGGAGGCTCAGGCCTTGGCAGAGGT...AACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | GTTGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGGGTCAGCATGGCCTCTaGCTCCGGGATTCTTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: VGPILYSSFLAPTLAPTLGQHGL*LRDSCL Trigger: TAGGCAAGAATCCCGGAGGCAGAGGCCATGCTGACC...CAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | TGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACTCACAGCAAGGCACCTaGTGTCCCAGGCAGGACTCA | + |
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Preference number: 4 (lower is better) Translates to: WSHPLFEFPCPYPSPDPDSQQGT*CPRQDS Trigger: TGAGTCCTGCCTGGGACAGCAGGTGCCTTGCTGTGA...GTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | ATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCCCCAGCTAGGTGCGGCTaGAGGGATTCATGGCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: ILYSSFLAPTLAPTLTLAPARCG*RDSWQY Trigger: GTACTGCCATGAATCCCTGCAGCCGCACCTAGCTGG...GGCCAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CCA 90 bp | TCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCTGCAGGGATTCATaGCAGTACCCAGCTTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SHPLFEFPCPYPSPDPDVGCRDS*QYPACG Trigger: GCCGCAAGCTGGGTACTGCCATGAATCCCTGCAGCC...AACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | ATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCCTGGCAGTACCCAGCTTaGGGCAGTAGCAGAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ILYSSFLAPTLAPTLTLAWQYPA*GSSRRH Trigger: ATGCCTTCTGCTACTGCCGCAAGCTGGGTACTGCCA...GGCCAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | ATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCCTTATTCGAGTTTCCTTaGCCCTACCCTAGCCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: ILYSSFLAPTLAPTLTLALFEFP*PYPSPD Trigger: GTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAA...GGCCAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR GCA 90 bp | ATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGACGTTGGCCCAACAGATCCTCTTCTaGCTGTTCTGCAGTTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: ILYSSFLAPTLAPTLTLAQQILF*LFCSCL Trigger: AAGACAACTGCAGAACAGGCAGAAGAGGATCTGTTG...GGCCAACGTCAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS GCA 90 bp | GCACATGGGTCACAGCAAGGCACCTGCTGTCCCAGGCAGGACTCATaGAGCCTTACGCAGCGACGTGAGGAGCGGGGCTCGCGGTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AHGSQQGTCCPRQDS*SLTQRREERGSRSC Trigger: GCAGGACCGCGAGCCCCGCTCCTCACGTCGCTGCGTAAGGCTGCATGAGTCCTGCCTGGGACAGCAGGTGCCTTGCTGTGACCCATGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS-3UTR CAA 90 bp | GTTGGTCCCATCCTTTATTCGAGTTTCCTTGCCCCTACCCTAGCCCCGACCCTGCTGCCTGTTCTGCAGTaGTCTTCTTCAGTGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: VGPILYSSFLAPTLAPTLLPVLQ*SSSVGP Trigger: GGGCCCCACTGAAGAAGACAACTGCAGAACAGGCAG...CAGGGTCGGGGCTAGGGTAGGGGCAAGGAAACTCGAATAAAGGATGGGACCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS TCA 90 bp | AGGGATTCATGGCAGTACCCAGCTTGCGGCAGTAGCAGAAGGCATTaGAGAAGCGGCAGTAGCACGTGGCACATGGGTCACAGCAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: RDSWQYPACGSSRRH*RSGSSTWHMGHSKA Trigger: TGCCTTGCTGTGACCCATGTGCCACGTGCTACTGCCGCTTCTTCAATGCCTTCTGCTACTGCCGCAAGCTGGGTACTGCCATGAATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS GCA 72 bp | TCACAGCAAGGCACCTGCTGTCCCAGGCAGGACTCATaGAGCCTTACGCAGCGACGTGAGGAGCGGGGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SQQGTCCPRQDS*SLTQRREERGS Trigger: CGAGCCCCGCTCCTCACGTCGCTGCGTAAGGCTGCATGAGTCCTGCCTGGGACAGCAGGTGCCTTGCTGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS CAA 72 bp | CCTCCTGCAACAGATCCTCTTCTGCCTGTTCTGCAGTaGTCTTCTTCAGTGGGGCCCGCAGGCCCAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PPATDPLLPVLQ*SSSVGPAGPGL Trigger: CAGGCCTGGGCCTGCGGGCCCCACTGAAGAAGACAACTGCAGAACAGGCAGAAGAGGATCTGTTGCAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS TCA 72 bp | TGGCAGTACCCAGCTTGCGGCAGTAGCAGAAGGCATTaGAGAAGCGGCAGTAGCACGTGGCACATGGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: WQYPACGSSRRH*RSGSSTWHMGH Trigger: GTGACCCATGTGCCACGTGCTACTGCCGCTTCTTCAATGCCTTCTGCTACTGCCGCAAGCTGGGTACTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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| CDS GCA 72 bp | TGCCAAGGCCTGAGCCTCCTGCAACAGATCCTCTTCTaGCTGTTCTGCAGTTGTCTTCTTCAGTGGGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: CQGLSLLQQILF*LFCSCLLQWGP Trigger: CGGGCCCCACTGAAGAAGACAACTGCAGAACAGGCAGAAGAGGATCTGTTGCAGGAGGCTCAGGCCTTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000290953.3 |
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