RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGPAT4 (Homo sapiens)

Ensembl gene IDs: ENSG00000026652

Ensembl transcript IDs: ENST00000320285.9, ENST00000366905.3, ENST00000366911.9, ENST00000436279.1, ENST00000437165.1, ENST00000624499.2

Found 1121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGCTGCCCACACCTCCGCGGCAGCTGCCTCCCGTGAGTAGGATCTaGAACACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGG +
Preference number: 1 (lower is better)
Translates to: QLPTPPRQLPPVSRI*NTKATGKGRMEGQR
Trigger: CCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGTGTTTCAGATCCTACTCACGGGAGGCAGCTGCCGCGGAGGTGTGGGCAGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp CCCACCCCTCTCAGCTGCCCACACCTCCGCGGCAGCTGCCTCCCGTaGGTAGGATCTGAAACACCAAAGCCACGGGCAAGGGCAGGATGG +
Preference number: 1 (lower is better)
Translates to: PTPLSCPHLRGSCLP*VGSETPKPRARAGW
Trigger: CCATCCTGCCCTTGCCCGTGGCTTTGGTGTTTCAGATCCTACTCACGGGAGGCAGCTGCCGCGGAGGTGTGGGCAGCTGAGAGGGGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp ATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCAGATGTaGTGGGCGCTCCCATCAAGCCTGCCTGCAGGGCCGCCAGCGAGT +
Preference number: 1 (lower is better)
Translates to: ISAHGASCPVQGGQM*WALPSSLPAGPPAS
Trigger: ACTCGCTGGCGGCCCTGCAGGCAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGAT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp TTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTaGGCAGATGTGCTGGGCGCTCCCATCAAGCCTGCCTGCAGGGCC +
Preference number: 1 (lower is better)
Translates to: LPTDLCTRCFMPCAG*ADVLGAPIKPACRA
Trigger: GGCCCTGCAGGCAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp TGGGCTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTaGAGGGTGGGCAGATGTGCTGGGCGCTCCCATCAAGCCTGCCTG +
Preference number: 1 (lower is better)
Translates to: WAFAHRSLHTVLHAL*RVGRCAGRSHQACL
Trigger: CAGGCAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp CTAAGGTCACGTCCTGGGCTTTTGCCCACAGATCTCTGCACACGGTaGTTCATGCCCTGTGCAGGGTGGGCAGATGTGCTGGGCGCTCCC +
Preference number: 1 (lower is better)
Translates to: LRSRPGLLPTDLCTR*FMPCAGWADVLGAP
Trigger: GGGAGCGCCCAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp CCCTTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTaGTTGCCATCTCTGCTCTCACAAATGCTCACGGGCTCCTGGACC +
Preference number: 1 (lower is better)
Translates to: PLLCARDTLRWSPRT*LPSLLSQMLTGSWT
Trigger: GGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp TGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTaGCATCTCTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTG +
Preference number: 1 (lower is better)
Translates to: CCVPGTRFVGLHARA*HLCSHKCSRAPGPV
Trigger: CACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp AGGAGACTGCACTGCAGAGACCGAGCGAAACTCTCCCTTGCTGTGTaGCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATC +
Preference number: 1 (lower is better)
Translates to: RRLHCRDRAKLSLAV*QGHASLVSTHVLAI
Trigger: GATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCTCGGTCTCTGCAGTGCAGTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp CCCTCTTGCCTAAGGTCACGTCCTGGGCTTTTGCCCACAGATCTCTaGACACGGTGCTTCATGCCCTGTGCAGGGTGGGCAGATGTGCTG +
Preference number: 1 (lower is better)
Translates to: PSCLRSRPGLLPTDL*TRCFMPCAGWADVL
Trigger: CAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp GCACCTGCAGATGCCGCACTCAGCAGCCTGGAATGCCAGCTCTCATaGCCTCACCTAGAAACGCCTTCTCGGCTGAATGGCTGTTGGCTC +
Preference number: 1 (lower is better)
Translates to: APADAALSSLECQLS*PHLETPSRLNGCWL
Trigger: GAGCCAACAGCCATTCAGCCGAGAAGGCGTTTCTAGGTGAGGGCATGAGAGCTGGCATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp TCAGGTGAATGGCGTAACTCAGCATCACGGACCCCTCCGAGAGACTaGCCCGATAATCCAGGCGCAGGTCCACTAGGGCGTGCTCACAGA +
Preference number: 1 (lower is better)
Translates to: SGEWRNSASRTPPRD*PDNPGAGPLGRAHR
Trigger: TCTGTGAGCACGCCCTAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGCTGAGTTACGCCATTCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp CTCTCATGCCCTCACCTAGAAACGCCTTCTCGGCTGAATGGCTGTTaGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCC +
Preference number: 1 (lower is better)
Translates to: LSCPHLETPSRLNGC*LSAAPVSIARPLLP
Trigger: GGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCGAGAAGGCGTTTCTAGGTGAGGGCATGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp GGGAGGCATCAGGCACTGTGCTGGCTTGGGGGATCCTGTGATGACTaGAACCTGGGCCTTCATTACGGGCTCCGGTTTTGGAGTGCAGAG +
Preference number: 1 (lower is better)
Translates to: GRHQALCWLGGSCDD*NLGLHYGLRFWSAE
Trigger: CTCTGCACTCCAAAACCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCAGCACAGTGCCTGATGCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp GCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGTaGCTAGGACCAGAAGAATCAGAAAGCATGGTGGAGTCCGAAAGC +
Preference number: 1 (lower is better)
Translates to: APVSIARPLLPRAKA*LGPEESESMVESES
Trigger: GCTTTCGGACTCCACCATGCTTTCTGATTCTTCTGGTCCTAGTCACGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp TTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCACAAATaGTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGTGCT +
Preference number: 1 (lower is better)
Translates to: FVGLHARACHLCSHK*SRAPGPVSPARSCA
Trigger: AGCACAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp GCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTaGCAAGGCGTGACTAGGACCAGAAGAATCAGAAAGCATGGTGGA +
Preference number: 1 (lower is better)
Translates to: ALSSTCQHSSAASAP*QGVTRTRRIRKHGG
Trigger: TCCACCATGCTTTCTGATTCTTCTGGTCCTAGTCACGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp ATGCCAGCTCTCATGCCCTCACCTAGAAACGCCTTCTCGGCTGAATaGCTGTTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCT +
Preference number: 1 (lower is better)
Translates to: MPALMPSPRNAFSAE*LLALSSTCQHSSAA
Trigger: AGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCGAGAAGGCGTTTCTAGGTGAGGGCATGAGAGCTGGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp CAGGGAGTTGGGTCCATCTTCAAGACTTACGCCAGGAGACTGCACTaGAGAGACCGAGCGAAACTCTCCCTTGCTGTGTGCCAGGGACAC +
Preference number: 1 (lower is better)
Translates to: QGVGSIFKTYARRLH*RDRAKLSLAVCQGH
Trigger: GTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCTCGGTCTCTGCAGTGCAGTCTCCTGGCGTAAGTCTTGAAGATGGACCCAACTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp GAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATaGCAGCTCTCATGCCCTCACCTAGAAACGCCTTCTCGGCTGAAT +
Preference number: 1 (lower is better)
Translates to: EQCGAPADAALSSLE*QLSCPHLETPSRLN
Trigger: ATTCAGCCGAGAAGGCGTTTCTAGGTGAGGGCATGAGAGCTGGCATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp ACCGAGCGAAACTCTCCCTTGCTGTGTGCCAGGGACACGCTTCGTTaGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCACAAATGCTC +
Preference number: 1 (lower is better)
Translates to: TERNSPLLCARDTLR*SPRTCLPSLLSQML
Trigger: GAGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCTCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp ACACCTCCACTTCTCCAAGGACCCCTCTTGCCTAAGGTCACGTCCTaGGCTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTG +
Preference number: 1 (lower is better)
Translates to: TPPLLQGPLLPKVTS*AFAHRSLHTVLHAL
Trigger: CAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAGAAGTGGAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp ATCAGGCACTGTGCTGGCTTGGGGGATCCTGTGATGACTGGAACCTaGGCCTTCATTACGGGCTCCGGTTTTGGAGTGCAGAGGGATTGG +
Preference number: 1 (lower is better)
Translates to: IRHCAGLGDPVMTGT*AFITGSGFGVQRDW
Trigger: CCAATCCCTCTGCACTCCAAAACCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCAGCACAGTGCCTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp TCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTCAGGTGAATaGCGTAACTCAGCATCACGGACCCCTCCGAGAGACTGGCCCGAT +
Preference number: 1 (lower is better)
Translates to: SHPNPTADELQSSGE*RNSASRTPPRDWPD
Trigger: ATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGCTGAGTTACGCCATTCACCTGAACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp AGAACAAGCAAAAGAGGGGCTGATCCATCTCCCGTGAACATCTGTTaGCTGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGAT +
Preference number: 1 (lower is better)
Translates to: RTSKRGADPSPVNIC*LWAAWASLAVFASD
Trigger: ATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACAGTCAACAGATGTTCACGGGAGATGGATCAGCCCCTCTTTTGCTTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp TTCTTCAGGGAGTTGGGTCCATCTTCAAGACTTACGCCAGGAGACTaGACTGCAGAGACCGAGCGAAACTCTCCCTTGCTGTGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: FFRELGPSSRLTPGD*TAETERNSPLLCAR
Trigger: CCTGGCACACAGCAAGGGAGAGTTTCGCTCGGTCTCTGCAGTGCAGTCTCCTGGCGTAAGTCTTGAAGATGGACCCAACTCCCTGAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp AAGGCTACACACCATGCACACCTCCACTTCTCCAAGGACCCCTCTTaGCTAAGGTCACGTCCTGGGCTTTTGCCCACAGATCTCTGCACA +
Preference number: 1 (lower is better)
Translates to: KATHHAHLHFSKDPS*LRSRPGLLPTDLCT
Trigger: TGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAGAAGTGGAGGTGTGCATGGTGTGTAGCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTaGAGTAAAATGGGAGCAGACAGGAGCCCGGAAGGAAGGCAGAAG +
Preference number: 1 (lower is better)
Translates to: SLQRPLEMLQGRTIP*SKMGADRSPEGRQK
Trigger: CTTCTGCCTTCCTTCCGGGCTCCTGTCTGCTCCCATTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp CTTTCCTTGATAGAACAAGCAAAAGAGGGGCTGATCCATCTCCCGTaGACATCTGTTGACTGTGGGCGGCCTGGGCCAGCCTTGCTGTGT +
Preference number: 1 (lower is better)
Translates to: LSLIEQAKEGLIHLP*TSVDCGRPGPALLC
Trigger: ACACAGCAAGGCTGGCCCAGGCCGCCCACAGTCAACAGATGTTCACGGGAGATGGATCAGCCCCTCTTTTGCTTGTTCTATCAAGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp GACCTTGGAGCCCTGAGTACCGCAGATGACTCTGATTCAGCTATGTaGCACAGGCTCAACCGCTACACGCTGCAGTGTGTTGAAGACGAC +
Preference number: 1 (lower is better)
Translates to: DLGALSTADDSDSAM*HRLNRYTLQCVEDD
Trigger: GTCGTCTTCAACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCACATAGCTGAATCAGAGTCATCTGCGGTACTCAGGGCTCCAAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR CCA 90 bp GGGCAGGGCTGTGAGCTCAGGAGCCCATCCCTGTGCTCAGAGAGATaGGACTCCAATGAGGAGACACACTATGTAGGTGCAATTTCTGAT +
Preference number: 1 (lower is better)
Translates to: GQGCELRSPSLCSER*DSNEETHYVGAISD
Trigger: ATCAGAAATTGCACCTACATAGTGTGTCTCCTCATTGGAGTCCCATCTCTCTGAGCACAGGGATGGGCTCCTGAGCTCACAGCCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp CAAAGAATGAGCCCAGAGCCTGAGATTCAAGATGCTGGTCTCTTCTaGACACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACT +
Preference number: 1 (lower is better)
Translates to: QRMSPEPEIQDAGLF*THRGAMWCTCRCRT
Trigger: AGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGTGTTCAGAAGAGACCAGCATCTTGAATCTCAGGCTCTGGGCTCATTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp CCCCTGAATGGTCCCTTGGCAGAGGCAAAGAATGAGCCCAGAGCCTaGGATTCAAGATGCTGGTCTCTTCTGAACACACCGTGGAGCAAT +
Preference number: 1 (lower is better)
Translates to: PLNGPLAEAKNEPRA*DSRCWSLLNTPWSN
Trigger: ATTGCTCCACGGTGTGTTCAGAAGAGACCAGCATCTTGAATCTCAGGCTCTGGGCTCATTCTTTGCCTCTGCCAAGGGACCATTCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp AGCTGGCTTGAAGCCCCTGAATGGTCCCTTGGCAGAGGCAAAGAATaGGCCCAGAGCCTGAGATTCAAGATGCTGGTCTCTTCTGAACAC +
Preference number: 1 (lower is better)
Translates to: SWLEAPEWSLGRGKE*AQSLRFKMLVSSEH
Trigger: GTGTTCAGAAGAGACCAGCATCTTGAATCTCAGGCTCTGGGCTCATTCTTTGCCTCTGCCAAGGGACCATTCAGGGGCTTCAAGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp CTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTaGGGATGTGAATTAGAGTGCTGGGATGTGCTAATGCCTAGGGAG +
Preference number: 1 (lower is better)
Translates to: LETLNLSPGCRRQGC*GCELECWDVLMPRE
Trigger: CTCCCTAGGCATTAGCACATCCCAGCACTCTAATTCACATCCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp AGGATATGCAGAGGCCACCAGTTCCCCAAGGTTCCCTTCGGATGGTaGCACCTCCCTGAGTCAGTCATTCAGTTTCTGCTTGCTGTCAGA +
Preference number: 1 (lower is better)
Translates to: RICRGHQFPKVPFGW*HLPESVIQFLLAVR
Trigger: TCTGACAGCAAGCAGAAACTGAATGACTGACTCAGGGAGGTGTCACCATCCGAAGGGAACCTTGGGGAACTGGTGGCCTCTGCATATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR GCA 90 bp TTTGGCACCTGTTGGCTGACAGCAGTCTGCAAAGGCCGCTGGAGATaGTACAGGGCAGAACTATTCCGTGGAGTAAAATGGGAGCAGACA +
Preference number: 1 (lower is better)
Translates to: FGTCWLTAVCKGRWR*YRAELFRGVKWEQT
Trigger: TGTCTGCTCCCATTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTCAGCCAACAGGTGCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp AGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTaGTCTCCAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCT +
Preference number: 1 (lower is better)
Translates to: SRLGYGPSRLGMTLH*SPDFTQGSYFSLPP
Trigger: AGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp CTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCGTTGTaGCTTAGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCAT +
Preference number: 1 (lower is better)
Translates to: LRPCHCYPEAGSAAL*LRHFTSLSHPVLVH
Trigger: ATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCTAAGTCACAACGCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp TGGCTTTCCTGGAAGAAGTCCATTAAATTCCCTGCTTCTATAAGCTaGAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACC +
Preference number: 1 (lower is better)
Translates to: WLSWKKSIKFPASIS*RSRLGYGPSRLGMT
Trigger: GGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAATTTAATGGACTTCTTCCAGGAAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp TTATCAGGGGTGACTTTGGCTGTCACTGCTGAGAGGAACAGTCGATaGAAGCTCATCTCACAAATCACTGCAGAATGCCCAGGCTGTACG +
Preference number: 1 (lower is better)
Translates to: LSGVTLAVTAERNSR*KLISQITAECPGCT
Trigger: CGTACAGCCTGGGCATTCTGCAGTGATTTGTGAGATGAGCTTGCATCGACTGTTCCTCTCAGCAGTGACAGCCAAAGTCACCCCTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp GTTCCCAGGCTGCATAACAAAATTGTTCTTCGTGGACAGGTCAAATaGCTGATGAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACAT +
Preference number: 1 (lower is better)
Translates to: VPRLHNKIVLRGQVK*LMRKRSRSLPSTPH
Trigger: ATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTCATCAGTCATTTGACCTGTCCACGAAGAACAATTTTGTTATGCAGCCTGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp ACTTTCAGCTGCGCACCTGGAGAAAGACATATCCTTCCTAACTCATaGTCCAAATACCTATCGGTCCAAGTGCCATTGGTGTCTTGGCCT +
Preference number: 1 (lower is better)
Translates to: TFSCAPGERHILPNS*SKYLSVQVPLVSWP
Trigger: AGGCCAAGACACCAATGGCACTTGGACCGATAGGTATTTGGAGCATGAGTTAGGAAGGATATGTCTTTCTCCAGGTGCGCAGCTGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp CTCCGGTTTTGGAGTGCAGAGGGATTGGCATTTGTAAAGACTGCTTaGTTACCCTTTGTCTGGCATGCACATTCAGGATGTGACTTCAGC +
Preference number: 1 (lower is better)
Translates to: LRFWSAEGLAFVKTA*LPFVWHAHSGCDFS
Trigger: GCTGAAGTCACATCCTGAATGTGCATGCCAGACAAAGGGTAAGCAAGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCAAAACCGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATaGTGGCAGAATCAGTCCAGTCCCCCAGACCTCAAGCTGCATCTT +
Preference number: 1 (lower is better)
Translates to: TECLTSSSRLIVFTI*WQNQSSPPDLKLHL
Trigger: AAGATGCAGCTTGAGGTCTGGGGGACTGGACTGATTCTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp AAAGCATGGTGGAGTCCGAAAGCATTGGCAAAGCCAGCACATCTGTaGGCATGTTACACATGGGCTTGCCTAAGTATTTCCTTCTCTGTG +
Preference number: 1 (lower is better)
Translates to: KAWWSPKALAKPAHL*ACYTWACLSISFSV
Trigger: CACAGAGAAGGAAATACTTAGGCAAGCCCATGTGTAACATGCTCACAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCCACCATGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp GCAGAGGGATTGGCATTTGTAAAGACTGCTTGCTTACCCTTTGTCTaGCATGCACATTCAGGATGTGACTTCAGCTTCATTCATCCTGGC +
Preference number: 1 (lower is better)
Translates to: AEGLAFVKTACLPFV*HAHSGCDFSFIHPG
Trigger: GCCAGGATGAATGAAGCTGAAGTCACATCCTGAATGTGCATGCCAGACAAAGGGTAAGCAAGCAGTCTTTACAAATGCCAATCCCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp CAAATGGTTGGTGTCTTTTTAAGAGTCCCCGTGGGCTGGCTTTCCTaGAAGAAGTCCATTAAATTCCCTGCTTCTATAAGCTGCAGGAGT +
Preference number: 1 (lower is better)
Translates to: QMVGVFLRVPVGWLS*KKSIKFPASISCRS
Trigger: ACTCCTGCAGCTTATAGAAGCAGGGAATTTAATGGACTTCTTCCAGGAAAGCCAGCCCACGGGGACTCTTAAAAAGACACCAACCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp AAAGTGAAACTGCATTTTATCAGGGGTGACTTTGGCTGTCACTGCTaGGAGGAACAGTCGATGCAAGCTCATCTCACAAATCACTGCAGA +
Preference number: 1 (lower is better)
Translates to: KVKLHFIRGDFGCHC*EEQSMQAHLTNHCR
Trigger: TCTGCAGTGATTTGTGAGATGAGCTTGCATCGACTGTTCCTCTCAGCAGTGACAGCCAAAGTCACCCCTGATAAAATGCAGTTTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp GACAGGTCAAAACCCTGGAGTATTTGGTTTGTGTTTAAATGTACTTaGCACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCA +
Preference number: 1 (lower is better)
Translates to: DRSKPWSIWFVFKCT*HSGNTQPKPWMQEA
Trigger: TGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTGTCAAGTACATTTAAACACAAACCAAATACTCCAGGGTTTTGACCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp TGCATCTTCCAAATGGTTGGTGTCTTTTTAAGAGTCCCCGTGGGCTaGCTTTCCTGGAAGAAGTCCATTAAATTCCCTGCTTCTATAAGC +
Preference number: 1 (lower is better)
Translates to: CIFQMVGVFLRVPVG*LSWKKSIKFPASIS
Trigger: GCTTATAGAAGCAGGGAATTTAATGGACTTCTTCCAGGAAAGCCAGCCCACGGGGACTCTTAAAAAGACACCAACCATTTGGAAGATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 90 bp GGTCCAAACATCCACCCAATCCACACGTTCTCTCAAAGACTAGCATaGTTCTGTCCAATACCTTGCTCTAATTCCAATTCATTCGTTCTC +
Preference number: 1 (lower is better)
Translates to: GPNIHPIHTFSQRLA*FCPIPCSNSNSFVL
Trigger: GAGAACGAATGAATTGGAATTAGAGCAAGGTATTGGACAGAACCATGCTAGTCTTTGAGAGAACGTGTGGATTGGGTGGATGTTTGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp TGCTCTCCAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTaGACTACAGAACAGGCTCTCAGTAGCGTGATAAGCTTTAAGCTA +
Preference number: 1 (lower is better)
Translates to: CSPDFTQGSYFSLPP*TTEQALSSVISFKL
Trigger: TAGCTTAAAGCTTATCACGCTACTGAGAGCCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTGGAGAGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp CTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTaGAAAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGAC +
Preference number: 1 (lower is better)
Translates to: LSHPVLVHQLSFLMI*KDTERMAFQNSMDD
Trigger: GTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp TCTGATGTCATTCTTAGGGCATCTTTGCTCTCTCCTGGCCATTACTaGTTGCTTTTATGTACTGAAAAGTCATCCATTGAATGGTCTGTT +
Preference number: 1 (lower is better)
Translates to: SDVILRASLLSPGHY*LLLCTEKSSIEWSV
Trigger: AACAGACCATTCAATGGATGACTTTTCAGTACATAAAAGCAAGCAGTAATGGCCAGGAGAGAGCAAAGATGCCCTAAGAATGACATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 90 bp AGAATCTTCACTGGATACCTTGCTTCACACTTTGGTCAATATTTATaGATAAGTTCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTG +
Preference number: 1 (lower is better)
Translates to: RIFTGYLASHFGQYL*ISSKAYAKPILFCL
Trigger: CAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGAACTTATTCATAAATATTGACCAAAGTGTGAAGCAAGGTATCCAGTGAAGATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 90 bp ATCCACACGTTCTCTCAAAGACTAGCATGGTTCTGTCCAATACCTTaGTCTAATTCCAATTCATTCGTTCTCATAACTTATTTGAAAAGG +
Preference number: 1 (lower is better)
Translates to: IHTFSQRLAWFCPIP*SNSNSFVLITYLKR
Trigger: CCTTTTCAAATAAGTTATGAGAACGAATGAATTGGAATTAGAGCAAGGTATTGGACAGAACCATGCTAGTCTTTGAGAGAACGTGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CGGAGGTGCTGCAAACTGGTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGGCGAGGCAGCCCCTTaGCCCGGGCCACCTGCATGC +
Preference number: 2 (lower is better)
Translates to: RRCCKLVATVLRSCSHLRGEAAP*PGPPAC
Trigger: GCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCC...GCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR GCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTACCCACCCCTCTCAGCTaGCCACACCTCCGCGGCAGC +
Preference number: 2 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLPTPLS*PHLRGS
Trigger: GCTGCCGCGGAGGTGTGGGCAGCTGAGAGGGGTGGG...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGCCCATCAAGCCTGCCTaGAGGGCCGCCAGCGAGTTA +
Preference number: 2 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAPIKPA*RAASEL
Trigger: TAACTCGCTGGCGGCCCTGCAGGCAGGCTTGATGGG...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCAGGCGAGGCAGCCCCTTaGCCCGGGCCACCTGCATGC +
Preference number: 2 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWAGEAAP*PGPPAC
Trigger: GCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCC...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR TCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGGGCAGGGCAGGGCTGTaGGCTCAGGAGCCCATCCCT +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRGRAGL*AQEPIP
Trigger: AGGGATGGGCTCCTGAGCTCACAGCCCTGCCCTGCC...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGGTTCGTGGCAACAGGTaGTGCTTGAGGCGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAVRGNR*CLRRGS
Trigger: GCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAAC...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCGCTCCCATCAAGCCTaGCTGCAGGGCCGCCAGCGA +
Preference number: 2 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKRSHQA*LQGRQR
Trigger: TCGCTGGCGGCCCTGCAGGCAGGCTTGATGGGAGCG...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGCTCCCCATCCGGCCTTaGGACCAGACTCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRLPIRP*DQTPWL
Trigger: CAGCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAG...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGTCCAAGGACCCCTCTTaGCTAAGGTCACGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LSAAPVSIARPLLPRAKASKDPS*LRSRPG
Trigger: CCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGA...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTTGGTTCGTGGCAACAGGTGATGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCTGGTGGCAACCGTCTTaGGATCCTGCTCCCACTTGC +
Preference number: 2 (lower is better)
Translates to: LGSWQQVMLEARQPLGPGWWQPS*DPAPTC
Trigger: GCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCA...GCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAACCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR TCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGCGTCACGTCTGGGGATaGCCCTGCACTGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRRHVWG*PCTALQ
Trigger: CTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACG...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGTGGTCTCCACGCACGTaGTTGCCATCTCTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAWSPRT*LPSLLS
Trigger: TGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCA...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGGGTGGGCAGATGTGCTaGGCGCTCCCATCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKGGQMC*ALPSSL
Trigger: CAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACC...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGACCCCTCCGAGAGACTaGCCCGATAATCCAGGCGCA +
Preference number: 2 (lower is better)
Translates to: LQESPRIWPVTSGDDPALTPPRD*PDNPGA
Trigger: TGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGT...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCCCGTGAGTAGGATCTaGAACACCAAAGCCACGGGC +
Preference number: 2 (lower is better)
Translates to: LQESPRIWPVTSGDDPALPVSRI*NTKATG
Trigger: GCCCGTGGCTTTGGTGTTTCAGATCCTACTCACGGG...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCGTCACGTCTGGGGATaGCCCTGCACTGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNRHVWG*PCTALQ
Trigger: CTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATGCAACAGGTGATGCTTaGGGCGAGGCAGCCCCTTGG +
Preference number: 2 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNATGDA*GEAAPW
Trigger: CCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGC...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR TCA 90 bp GGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCTCAAGCTCCTCACGGTaGTGGCGAAGCCCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: GPGHLHADLMLLLREPCASSSSR*WRSPWF
Trigger: GAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGA...GGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366911.9
ENST00000436279.1
3UTR-3UTR GCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTACTTACGCCAGGAGACTaGACTGCAGAGACCGAGCGA +
Preference number: 2 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLLTPGD*TAETER
Trigger: TCGCTCGGTCTCTGCAGTGCAGTCTCCTGGCGTAAG...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGTGGCTGACAGCAGTCTaGAAAGGCCGCTGGAGATGC +
Preference number: 2 (lower is better)
Translates to: LQESPRIWPVTSGDDPALWLTAV*KGRWRC
Trigger: GCATCTCCAGCGGCCTTTGCAGACTGCTGTCAGCCA...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCCAGGGTGGGCAGATGTaGTGGGCGCTCCCATCAAGC +
Preference number: 2 (lower is better)
Translates to: RSTRACSQTRKATHHAHLQGGQM*WALPSS
Trigger: GCTTGATGGGAGCGCCCAGCACATCTGCCCACCCTG...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGGCCGCTTCTGCCCCGTaGCAAGGCGTGACTAGGACC +
Preference number: 2 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRAASAP*QGVTRT
Trigger: GGTCCTAGTCACGCCTTGGCACGGGGCAGAAGCGGC...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAAGGGACACGCTTCGTTaGTCTCCACGCACGTGCTTG +
Preference number: 2 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLRDTLR*SPRTCL
Trigger: CAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCT...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGAGAGTCCCCGTGGGCTaGCTTTCCTGGAAGAAGTCC +
Preference number: 2 (lower is better)
Translates to: LQESPRIWPVTSGDDPALRVPVG*LSWKKS
Trigger: GGACTTCTTCCAGGAAAGCCAGCCCACGGGGACTCT...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp GCTCTCATGCCCTCACCTAGAAACGCCTTCTCGGCTGAATGGCTGTaGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCC +
Preference number: 2 (lower is better)
Translates to: ALMPSPRNAFSAEWL*ALSSTCQHSSAASA
Trigger: GGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCGAGAAGGCGTTTCTAGGTGAGGGCATGAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCCCGTGAGTAGGATCTaGAACACCAAAGCCACGGGC +
Preference number: 2 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHPVSRI*NTKATG
Trigger: GCCCGTGGCTTTGGTGTTTCAGATCCTACTCACGGG...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGATGGGTGAAGGTATTTaGGGAGGCGTGATGAGCTTC +
Preference number: 2 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAMGEGI*GGVMSF
Trigger: GAAGCTCATCACGCCTCCTCAAATACCTTCACCCAT...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGTGGTGGAGGCATTATaGGGGGACTACTCCACAGGA +
Preference number: 2 (lower is better)
Translates to: LALSSTCQHSSAASAPCQVVEAL*GDYSTG
Trigger: TCCTGTGGAGTAGTCCCCTCATAATGCCTCCACCAC...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGAATGAGCCCAGAGCCTaGGATTCAAGATGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: LSAAPVSIARPLLPRAKANEPRA*DSRCWS
Trigger: AGACCAGCATCTTGAATCTCAGGCTCTGGGCTCATT...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCCCACTAAGGAGGATATaGAGAGGCCACCAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSPLRRI*RGHQFP
Trigger: GGGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGG...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACTTGGCCCGGGCCACCTaGATGCTGATCTCATGCTTC +
Preference number: 2 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYLARAT*MLISCF
Trigger: GAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAA...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR CCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGGAAGCAGTGGCCTCCTaGTCAGCTACAGACACAGGC +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLREAVAS*SATDTG
Trigger: GCCTGTGTCTGTAGCTGACCAGGAGGCCACTGCTTC...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp TTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTaGCCATCTCTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: LLCARDTLRWSPRTC*PSLLSQMLTGSWTC
Trigger: ACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp CACTTCTCCAAGGACCCCTCTTGCCTAAGGTCACGTCCTGGGCTTTaGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: HFSKDPSCLRSRPGL*PTDLCTRCFMPCAG
Trigger: CCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGAAACGCCTTCTCGGCTaGATGGCTGTTGGCTCTCAG +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRKRLLG*MAVGSQ
Trigger: CTGAGAGCCAACAGCCATTCAGCCGAGAAGGCGTTT...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AATACTTCTCGGGGTAGTCCCGGAGGTGCTGCAAACTGGTGGCAACCGTCTTGCGTTCGTGGCAACAGGTaGTGCTTGAGGCGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: NTSRGSPGGAANWWQPSCVRGNR*CLRRGS
Trigger: GCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAAC...GCAAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACTACCCCGAGAAGTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR TCA 90 bp GTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGTCAAGCTCCTCACGGTaGTGGCGAAGCCCTTGGTTC +
Preference number: 2 (lower is better)
Translates to: VATVLRSCSHLREQKTISSSSSR*WRSPWF
Trigger: GAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGA...CGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR TCA 90 bp GGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCAGAAGACCATCTCGGTaGAGTACCACATCCAGCCGA +
Preference number: 2 (lower is better)
Translates to: GPGHLHADLMLLLREPCARRPSR*STTSSR
Trigger: TCGGCTGGATGTGGTACTTCACCGAGATGGTCTTCT...GGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR GCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCGTGCTTGCCATCTCTaGTCTCACAAATGCTCACGG +
Preference number: 2 (lower is better)
Translates to: LQESPRIWPVTSGDDPALRACHL*SHKCSR
Trigger: CCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACG...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGTTCCGTGGAGTAAAATaGGAGCAGACAGGAGCCCGG +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRFRGVK*EQTGAR
Trigger: CCGGGCTCCTGTCTGCTCCCATTTTACTCCACGGAA...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCCTAAGGTCACGTCCTaGGCTTTTGCCCACAGATCT +
Preference number: 2 (lower is better)
Translates to: LQESPRIWPVTSGDDPALPKVTS*AFAHRS
Trigger: AGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGG...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCCGCACTCAGCAGCCTaGAATGCCAGCTCTCATGCC +
Preference number: 2 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRPHSAA*NASSHA
Trigger: GGCATGAGAGCTGGCATTCCAGGCTGCTGAGTGCGG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp GACCGAGCGAAACTCTCCCTTGCTGTGTGCCAGGGACACGCTTCGTaGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCACAAATGCT +
Preference number: 2 (lower is better)
Translates to: DRAKLSLAVCQGHAS*VSTHVLAISALTNA
Trigger: AGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCTCGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp AGGTGCTGCAAACTGGTGGCAACCGTCTTGCGATCCTGCTCCCACTaGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCAGCCG +
Preference number: 2 (lower is better)
Translates to: RCCKLVATVLRSCSH*REQKTISVKYHIQP
Trigger: CGGCTGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR TCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAATGGCTGGAGAGGTCGTaGCTTCCGCCGTGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKWLERS*LPPCPA
Trigger: TGCTGGGCACGGCGGAAGTCACGACCTCTCCAGCCA...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAGCATTTTATCAGGGGTaGCTTTGGCTGTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLAFYQG*LWLSLL
Trigger: CAGCAGTGACAGCCAAAGTCACCCCTGATAAAATGC...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp ATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCAGCAACAGGTGATGCTTaGGGCGAGGCAGCCCCTTGG +
Preference number: 2 (lower is better)
Translates to: ILLPLARTEDHLGEVPHPATGDA*GEAAPW
Trigger: CCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGC...TGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR GCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATAGCCCTGCCCTCCCCTaGAGCCTAAAATACCCTTTC +
Preference number: 2 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNSPALP*SLKYPF
Trigger: GAAAGGGTATTTTAGGCTGCAGGGGAGGGCAGGGCT...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTTCCTGCCAGGAGCTGTaGTGGCCTGCCCACCCCTCT +
Preference number: 2 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTSCQEL*WPAHPS
Trigger: AGAGGGGTGGGCAGGCCAGCACAGCTCCTGGCAGGA...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGTCCTGCCAGGAGCTGTaGTGGCCTGCCCACCCCTCT +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALSCQEL*WPAHPS
Trigger: AGAGGGGTGGGCAGGCCAGCACAGCTCCTGGCAGGA...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGCTCCACGCACGTGCTTaGCATCTCTGCTCTCACAAA +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRLHARA*HLCSHK
Trigger: TTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAG...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCACGTCCTGGGCTTTTaGCCACAGATCTCTGCACAC +
Preference number: 2 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNHVLGF*PQISAH
Trigger: GTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGCAAACTGGTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGTTGGCCCGGGCCACCTaGATGCTGATCTCATGCTTC +
Preference number: 2 (lower is better)
Translates to: CKLVATVLRSCSHLREQKLARAT*MLISCF
Trigger: GAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAA...CTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR CCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGGGTGGGCAGATGTGCTaGGCGCTCCCATCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: EKEVQISPQHATFSFGSKGGQMC*ALPSSL
Trigger: CAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACC...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCTGGAGAGTTGCATTTTaGGGGGCTCTCCTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSWRVAF*GALLEA
Trigger: AGCTTCTAGGAGAGCCCCCCAAAATGCAACTCTCCA...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp CAAGGCTACACACCATGCACACCTCCACTTCTCCAAGGACCCCTCTaGCCTAAGGTCACGTCCTGGGCTTTTGCCCACAGATCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: QGYTPCTPPLLQGPL*PKVTSWAFAHRSLH
Trigger: GTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAGAAGTGGAGGTGTGCATGGTGTGTAGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp GCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTaGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: AVFASDASKEAPVVA*AQLRPCHCYPEAGS
Trigger: AGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGTTTGGCTGTCACTGCTaGGAGGAACAGTCGATGCAA +
Preference number: 2 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKFGCHC*EEQSMQ
Trigger: TTGCATCGACTGTTCCTCTCAGCAGTGACAGCCAAA...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATATGTCGGCTCTGATTTaGCCCTCATCAGAGCAGGAC +
Preference number: 2 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNMSALI*PSSEQD
Trigger: GTCCTGCTCTGATGAGGGTCAAATCAGAGCCGACAT...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGCTCTCCCTTGCTGTGTaGCAGGGACACGCTTCGTTG +
Preference number: 2 (lower is better)
Translates to: FPASISCRSRLGYGPSRLLSLAV*QGHASL
Trigger: CAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAG...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCAAGCGAAACTCTCCCTTaGTGTGTGCCAGGGACACGC +
Preference number: 2 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPSETLP*CVPGTR
Trigger: GCGTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCT...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCAGACAAGCTCTACATaGTGGGAAGGGGCGAGGCAT +
Preference number: 2 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRQTSST*WEGARH
Trigger: ATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGAAAGGCCGCTGGAGATaGTACAGGGCAGAACTATTC +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRKGRWR*YRAELF
Trigger: GAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTT...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGATCCTTCCTAACTCATaGTCCAAATACCTATCGGTC +
Preference number: 2 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAILPNS*SKYLSV
Trigger: GACCGATAGGTATTTGGAGCATGAGTTAGGAAGGAT...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCCGCTCCCATCAAGCCTaGCTGCAGGGCCGCCAGCGA +
Preference number: 2 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIRSHQA*LQGRQR
Trigger: TCGCTGGCGGCCCTGCAGGCAGGCTTGATGGGAGCG...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGGCACACGGTGCTTCATaGCCTGTGCAGGGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALAHGAS*PVQGGQ
Trigger: CTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGC...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGGGGATGACCCTGCACTaGTCTCCAGATTTCACTCAA +
Preference number: 2 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKGMTLH*SPDFTQ
Trigger: TTGAGTGAAATCTGGAGAGCAGTGCAGGGTCATCCC...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGGCTCCGGTTTTGGAGTaGAGAGGGATTGGCATTTGT +
Preference number: 2 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKAPVLE*RGIGIC
Trigger: ACAAATGCCAATCCCTCTGCACTCCAAAACCGGAGC...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCTTCTGAACACACCGTaGAGCAATGTGGTGCACCTG +
Preference number: 2 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNLLNTP*SNVVHL
Trigger: CAGGTGCACCACATTGCTCCACGGTGTGTTCAGAAG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCTTGCAGATGGGGAAATaGGTCAGCAAGGAAAAGTGT +
Preference number: 2 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSLQMGK*VSKEKC
Trigger: ACACTTTTCCTTGCTGACTCATTTCCCCATCTGCAA...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp ACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGGAGCCCTGCCCTCCCCTaGAGCCTAAAATACCCTTTC +
Preference number: 2 (lower is better)
Translates to: TFLKLLTVMAKPLVRGNRSPALP*SLKYPF
Trigger: GAAAGGGTATTTTAGGCTGCAGGGGAGGGCAGGGCT...CCTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCCCCACCCCTCTCAGCTaGCCACACCTCCGCGGCAGC +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLPTPLS*PHLRGS
Trigger: GCTGCCGCGGAGGTGTGGGCAGCTGAGAGGGGTGGG...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCAAGGCTACACACCATaGACACCTCCACTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNQGYTP*TPPLLQ
Trigger: TTGGAGAAGTGGAGGTGTGCATGGTGTGTAGCCTTG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACTGCATGCTGATCTCATaGTTCTTCTCCGTGAACCGT +
Preference number: 2 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHCMLIS*FFSVNR
Trigger: ACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCA...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGCATTCAGTTTCTGCTTaGTGTCAGAGTTGCCGTAGG +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRHSVSA*CQSCRR
Trigger: CCTACGGCAACTCTGACAGCAAGCAGAAACTGAATG...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCCAGTCATTCAGTTTCTaGTTGCTGTCAGAGTTGCCG +
Preference number: 2 (lower is better)
Translates to: CQGHASLVSTHVLAISALQSFSF*LLSELP
Trigger: CGGCAACTCTGACAGCAAGCAGAAACTGAATGACTG...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR CCA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTATGCCCTGTGCAGGGTaGGCAGATGTGCTGGGCGCT +
Preference number: 2 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVMPCAG*ADVLGA
Trigger: AGCGCCCAGCACATCTGCCCACCCTGCACAGGGCAT...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGGAGACACAGGTGTGGTaGAGGCATTATGAGGGGACT +
Preference number: 2 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRETQVW*RHYEGT
Trigger: AGTCCCCTCATAATGCCTCCACCACACCTGTGTCTC...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCAATTCAGAAGAAAATTaGATGTCTGTGGGCCCCCGG +
Preference number: 2 (lower is better)
Translates to: RSTRACSQTRKATHHAHLNSEEN*MSVGPR
Trigger: CCGGGGGCCCACAGACATTCAATTTTCTTCTGAATT...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTGTGCTTCATGCCCTGTaGAGGGTGGGCAGATGTGCT +
Preference number: 2 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTVLHAL*RVGRCA
Trigger: AGCACATCTGCCCACCCTGCACAGGGCATGAAGCAC...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGAGGTCCACTAGGGCGTaGTCACAGACACGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALRSTRA*SQTRKA
Trigger: AGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCACCAGGTTCCCAGGCTaGATAACAAAATTGTTCTTC +
Preference number: 2 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSTRFPG*ITKLFF
Trigger: GAAGAACAATTTTGTTATGCAGCCTGGGAACCTGGT...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGGGATGTGAATTAGAGTaGTGGGATGTGCTAATGCCT +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRGCELE*WDVLMP
Trigger: AGGCATTAGCACATCCCAGCACTCTAATTCACATCC...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGCTGAGGCCATGCCATTaGTACCCGGAAGCTGGCTCT +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALLRPCH*YPEAGS
Trigger: AGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAG...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAAGTATGTGGCAAGTCTaGACCACTGCTTTAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LALSSTCQHSSAASAPCQSMWQV*TTALEK
Trigger: TTTCTCTAAAGCAGTGGTCCAGACTTGCCACATACT...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCAATGGGTGAAGGTATTTaGGGAGGCGTGATGAGCTTC +
Preference number: 2 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPMGEGI*GGVMSF
Trigger: GAAGCTCATCACGCCTCCTCAAATACCTTCACCCAT...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCAACTTTCCTTCCTCATaGTCTGCAAAGATACAGAGA +
Preference number: 2 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSNFPSS*SAKIQR
Trigger: TCTCTGTATCTTTGCAGATCATGAGGAAGGAAAGTT...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAACTCTGCTCTCACAAATaGTCACGGGCTCCTGGACCT +
Preference number: 2 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKLCSHK*SRAPGP
Trigger: AGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAGAG...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCATCTCACAAATCACTaGAGAATGCCCAGGCTGTAC +
Preference number: 2 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRHLTNH*RMPRLY
Trigger: GTACAGCCTGGGCATTCTGCAGTGATTTGTGAGATG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCAGAGAGGAACAGTCGATaGAAGCTCATCTCACAAATC +
Preference number: 2 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWAERNSR*KLISQI
Trigger: GATTTGTGAGATGAGCTTGCATCGACTGTTCCTCTC...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGGCTTTTACAAAGCTTTaGATGCATTTGTTTAGAGGA +
Preference number: 2 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAAFTKL*MHLFRG
Trigger: TCCTCTAAACAAATGCATGCAAAGCTTTGTAAAAGC...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAATTTCTTCAGGGAGTTaGGTCCATCTTCAAGACTTA +
Preference number: 2 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLISSGS*VHLQDL
Trigger: TAAGTCTTGAAGATGGACCCAACTCCCTGAAGAAAT...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGGTCTGCAAAGGCCGCTaGAGATGCTACAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALVCKGR*RCYRAE
Trigger: TTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCCGACAAGAAAATTTCTaGGCATTTTTGAGAGTAGCA +
Preference number: 2 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSRQENF*AFLRVA
Trigger: TGCTACTCTCAAAAATGCTCAGAAATTTTCTTGTCG...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGTCAGTTAAGGCATCGTaGGACACAGGTGTGGTGGAG +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALSVKAS*DTGVVE
Trigger: CTCCACCACACCTGTGTCTCACGATGCCTTAACTGA...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGAGGAGGCAGGGATGCTaGGGATGTGAATTAGAGTGC +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALRRQGC*GCELEC
Trigger: GCACTCTAATTCACATCCTCAGCATCCCTGCCTCCT...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGACCTATCGGTCCAAGTaGCATTGGTGTCTTGGCCTA +
Preference number: 2 (lower is better)
Translates to: EKEVQISPQHATFSFGSKTYRSK*HWCLGL
Trigger: TAGGCCAAGACACCAATGGCACTTGGACCGATAGGT...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGAGGATTCTTAAAGTGTaGTCTTTTACCCTTGACACA +
Preference number: 2 (lower is better)
Translates to: LQESPRIWPVTSGDDPALRILKV*SFTLDT
Trigger: TGTGTCAAGGGTAAAAGAGCACACTTTAAGAATCCT...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGACAAGCTCTACATGCTaGGAAGGGGCGAGGCATTTT +
Preference number: 2 (lower is better)
Translates to: EKEVQISPQHATFSFGSKTSSTC*EGARHF
Trigger: AAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGT...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGTTTCAGCTGCGCACCTaGAGAAAGACATATCCTTCC +
Preference number: 2 (lower is better)
Translates to: FPASISCRSRLGYGPSRLFQLRT*RKTYPS
Trigger: GGAAGGATATGTCTTTCTCCAGGTGCGCAGCTGAAA...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCAAAATTGAATGTCTGTaGGCCCCCGGATCTATGTTT +
Preference number: 2 (lower is better)
Translates to: RSTRACSQTRKATHHAHLKIECL*APGSMF
Trigger: AAACATAGATCCGGGGGCCCACAGACATTCAATTTT...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGCTAGAGAATCTTCACTaGATACCTTGCTTCACACTT +
Preference number: 2 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRLENLH*IPCFTL
Trigger: AAGTGTGAAGCAAGGTATCCAGTGAAGATTCTCTAG...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp AACCTGGGCCTTCATTACGGGCTCCGGTTTTGGAGTGCAGAGGGATaGGCATTTGTAAAGACTGCTTGCTTACCCTTTGTCTGGCATGCA +
Preference number: 2 (lower is better)
Translates to: NLGLHYGLRFWSAEG*AFVKTACLPFVWHA
Trigger: TGCATGCCAGACAAAGGGTAAGCAAGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCAAAACCGGAGCCCGTAATGAAGGCCCAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCACAGTGAATTCTGATTCAGCTATGTaGCACAGGCTCAACCGCTAC +
Preference number: 2 (lower is better)
Translates to: LHADLMLLLREPCALTVNSDSAM*HRLNRY
Trigger: GTAGCGGTTGAGCCTGTGTCACATAGCTGAATCAGA...ATTCACTGTGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR GCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCTTGTTTAGAGGATATTaGAGTCGAGATATTCCAGTA +
Preference number: 2 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSLFRGY*SRDIPV
Trigger: TACTGGAATATCTCGACTGCAATATCCTCTAAACAA...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAACCTAACATACAAATCTaGATGGTATTTCTTTCCGTT +
Preference number: 2 (lower is better)
Translates to: LALSSTCQHSSAASAPCQPNIQI*MVFLSV
Trigger: AACGGAAAGAAATACCATGCAGATTTGTATGTTAGG...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR GCA 90 bp TTGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCAGCCGATAATTGGGTCAACCGCTACACGCTaGAGTGTGTTGAAGACGACA +
Preference number: 2 (lower is better)
Translates to: LREQKTISVKYHIQPIIGSTATR*SVLKTT
Trigger: TGTCGTCTTCAACACACTGCAGCGTGTAGCGGTTGA...CCCAATTATCGGCTGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR GCA 90 bp TATTTCTACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGGATCCTGCTCCCACTTaGGCGAACAGAAGACCATCT +
Preference number: 2 (lower is better)
Translates to: YFYISQAPHGDGEALGSWDPAPT*ANRRPS
Trigger: AGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATC...CCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTAGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR CCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCACCAGACTCCCTGGCTaGAGAGGTCGTGACTTCCGC +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLTRLPG*RGRDFR
Trigger: GCGGAAGTCACGACCTCTCCAGCCAGGGAGTCTGGT...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACTTTTCACTTTATCTCTaGCAACCAAGGGTTACAGAA +
Preference number: 2 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYFSLYL*QPRVTE
Trigger: TTCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAA...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGACATACAAATCTGCATaGTATTTCTTTCCGTTTAGG +
Preference number: 2 (lower is better)
Translates to: LQESPRIWPVTSGDDPALTYKSA*YFFPFR
Trigger: CCTAAACGGAAAGAAATACCATGCAGATTTGTATGT...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR TCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCCTCAGCACCAAAGGATaGAAGGGGAACTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GKHPSEMKPISCPHSHHILSTKG*KGNLSP
Trigger: AGGGGACAAGTTCCCCTTTCATCCTTTGGTGCTGAG...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGTTGCAGATGGGGAAATaGGTCAGCAAGGAAAAGTGT +
Preference number: 2 (lower is better)
Translates to: EKEVQISPQHATFSFGSKLQMGK*VSKEKC
Trigger: ACACTTTTCCTTGCTGACTCATTTCCCCATCTGCAA...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTGGCAGGGCAGGGCTGTaGGCTCAGGAGCCCATCCCT +
Preference number: 2 (lower is better)
Translates to: FLENSFAISLVTPKLQNIGRAGL*AQEPIP
Trigger: AGGGATGGGCTCCTGAGCTCACAGCCCTGCCCTGCC...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGCATCTCACAAATCACTaGAGAATGCCCAGGCTGTAC +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALHLTNH*RMPRLY
Trigger: GTACAGCCTGGGCATTCTGCAGTGATTTGTGAGATG...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTCAAGGCTACACACCATaGACACCTCCACTTCTCCAA +
Preference number: 2 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVQGYTP*TPPLLQ
Trigger: TTGGAGAAGTGGAGGTGTGCATGGTGTGTAGCCTTG...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGGCTTGCTGTCAGAGTTaGCGTAGGCAGAGCCCTTGT +
Preference number: 2 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQACCQS*RRQSPC
Trigger: ACAAGGGCTCTGCCTACGGCAACTCTGACAGCAAGC...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR CCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCATGCCCTGTGCAGGGTaGGCAGATGTGCTGGGCGCT +
Preference number: 2 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAMPCAG*ADVLGA
Trigger: AGCGCCCAGCACATCTGCCCACCCTGCACAGGGCAT...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGACACCATGGGCGTCTCTaGGAAGGTGCCCGTCCTGTA +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRHHGRL*EGARPV
Trigger: TACAGGACGGGCACCTTCCCAGAGACGCCCATGGTG...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR CAA 90 bp GTGGCCTCCTGGTCAGCTACAGACACAGGCGGGTTAGGGCCCGTCTaGCTTTCATGTTCTTTTAAACACAAATGGCAGCTCACAAATATT +
Preference number: 2 (lower is better)
Translates to: VASWSATDTGGLGPV*LSCSFKHKWQLTNI
Trigger: AATATTTGTGAGCTGCCATTTGTGTTTAAAAGAACATGAAAGCAAGACGGGCCCTAACCCGCCTGTGTCTGTAGCTGACCAGGAGGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTTGGCTGGAGAGGTCGTaGCTTCCGCCGTGCCCAGCA +
Preference number: 2 (lower is better)
Translates to: FLENSFAISLVTPKLQNIWLERS*LPPCPA
Trigger: TGCTGGGCACGGCGGAAGTCACGACCTCTCCAGCCA...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTCCCCGTGCCAAGGCGTaGCTAGGACCAGAAGAATCA +
Preference number: 2 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAPRAKA*LGPEES
Trigger: TGATTCTTCTGGTCCTAGTCACGCCTTGGCACGGGG...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCAATGAGCCCAGAGCCTaGGATTCAAGATGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: GKHPSEMKPISCPHSHHINEPRA*DSRCWS
Trigger: AGACCAGCATCTTGAATCTCAGGCTCTGGGCTCATT...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCTTGCCCACAGATCTCTaGACACGGTGCTTCATGCCC +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLLPTDL*TRCFMP
Trigger: GGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAA...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGATCCAAGGACCCCTCTTaGCTAAGGTCACGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRSKDPS*LRSRPG
Trigger: CCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGA...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTAGGTCCACTAGGGCGTaGTCACAGACACGCAAGGCT +
Preference number: 2 (lower is better)
Translates to: KLYDSYPVKSFTNTALGARSTRA*SQTRKA
Trigger: AGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGGGATGTGAATTAGAGTaGTGGGATGTGCTAATGCCT +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALGCELE*WDVLMP
Trigger: AGGCATTAGCACATCCCAGCACTCTAATTCACATCC...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTCTCCCCATCCGGCCTTaGGACCAGACTCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGLPIRP*DQTPWL
Trigger: CAGCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAG...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGGGATGTCGGCTCTaGTTTGACCCTCATCAGAGC +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLMGCRL*FDPHQS
Trigger: GCTCTGATGAGGGTCAAATCAGAGCCGACATCCCAT...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAGGCAGAGGCAAAGAATaGGCCCAGAGCCTGAGATTC +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRGRGKE*AQSLRF
Trigger: GAATCTCAGGCTCTGGGCTCATTCTTTGCCTCTGCC...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCCTCCACGCACGTGCTTaGCATCTCTGCTCTCACAAA +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLLHARA*HLCSHK
Trigger: TTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAG...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTTCAGGCCCTAGGCTCTaGAGTACGCTCTTCCCACAA +
Preference number: 2 (lower is better)
Translates to: KLYDSYPVKSFTNTALGASGPRL*STLFPQ
Trigger: TTGTGGGAAGAGCGTACTGCAGAGCCTAGGGCCTGA...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGCACACGGTGCTTCATaGCCTGTGCAGGGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVAHGAS*PVQGGQ
Trigger: CTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCAAGCCCATTCTGTTTTaGTTGGGGACCAGCCAGACC +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLKPILF*LGTSQT
Trigger: GGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTT...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGGTCTGCAAAGGCCGCTaGAGATGCTACAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: QISLKVRIFLCHLELQNRVCKGR*RCYRAE
Trigger: TTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCGTGGTGGAGGCATTATaGGGGGACTACTCCACAGGA +
Preference number: 2 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAVVEAL*GDYSTG
Trigger: TCCTGTGGAGTAGTCCCCTCATAATGCCTCCACCAC...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGACGTGCTTGCCATCTCTaGTCTCACAAATGCTCACGG +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRRACHL*SHKCSR
Trigger: CCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACG...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTCCCATCAAGCCTGCCTaGAGGGCCGCCAGCGAGTTA +
Preference number: 2 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGPIKPA*RAASEL
Trigger: TAACTCGCTGGCGGCCCTGCAGGCAGGCTTGATGGG...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATATGCTCACGGGCTCCTaGACCTGTGTCTCCTGCCAG +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDMLTGS*TCVSCQ
Trigger: CTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCAT...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCTTCCGTGGAGTAAAATaGGAGCAGACAGGAGCCCGG +
Preference number: 2 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAFRGVK*EQTGAR
Trigger: CCGGGCTCCTGTCTGCTCCCATTTTACTCCACGGAA...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTCCTAAGGTCACGTCCTaGGCTTTTGCCCACAGATCT +
Preference number: 2 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAPKVTS*AFAHRS
Trigger: AGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGG...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCAATTCAGAAGAAAATTaGATGTCTGTGGGCCCCCGG +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLNSEEN*MSVGPR
Trigger: CCGGGGGCCCACAGACATTCAATTTTCTTCTGAATT...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCAGCTTTAAGCTAGAATaGGATGGAAAGGTGGGAAAG +
Preference number: 2 (lower is better)
Translates to: GKHPSEMKPISCPHSHHISFKLE*DGKVGK
Trigger: CTTTCCCACCTTTCCATCTCATTCTAGCTTAAAGCT...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCGATGCTGGTCTCTTCTaGACACACCGTGGAGCAATG +
Preference number: 2 (lower is better)
Translates to: KKSIESFSQIVRLLFSKADAGLF*THRGAM
Trigger: CATTGCTCCACGGTGTGTTCAGAAGAGACCAGCATC...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp TTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTTTAGATCTACCTAGCAAAATAGGCTaGTACAGAAAGGAATTGTCC +
Preference number: 2 (lower is better)
Translates to: FDKLGRAPRFGARKALDLPSKIG*YRKELS
Trigger: GGACAATTCCTTTCTGTATCAGCCTATTTTGCTAGG...TAGATCTAAAGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437165.1
3UTR-3UTR GCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCCTTACGCCAGGAGACTaGACTGCAGAGACCGAGCGA +
Preference number: 2 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVLTPGD*TAETER
Trigger: TCGCTCGGTCTCTGCAGTGCAGTCTCCTGGCGTAAG...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTACCAGACTCCCTGGCTaGAGAGGTCGTGACTTCCGC +
Preference number: 2 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGTRLPG*RGRDFR
Trigger: GCGGAAGTCACGACCTCTCCAGCCAGGGAGTCTGGT...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGACAAGCTCTACATGCTaGGAAGGGGCGAGGCATTTT +
Preference number: 2 (lower is better)
Translates to: QISLKVRIFLCHLELQNRTSSTC*EGARHF
Trigger: AAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGT...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGACCCCCATTTTGCAGATaGGGAAATGAGTCAGCAAGG +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRPPFCR*GNESAR
Trigger: CCTTGCTGACTCATTTCCCCATCTGCAAAATGGGGG...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGAGTCGCCTAGGATATaGCCCGTCACGTCTGGGGAT +
Preference number: 2 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVESPRI*PVTSGD
Trigger: ATCCCCAGACGTGACGGGCCATATCCTAGGCGACTC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGATGGAGAGTTGCATTTTaGGGGGCTCTCCTAGAAGCT +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRWRVAF*GALLEA
Trigger: AGCTTCTAGGAGAGCCCCCCAAAATGCAACTCTCCA...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTGGAGTCCGAAAGCATTaGCAAAGCCAGCACATCTGT +
Preference number: 2 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAGVRKH*QSQHIC
Trigger: ACAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCC...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATCGGCTGAATGGCTGTTaGCTCTCAGCAGCACCTGTC +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDRLNGC*LSAAPV
Trigger: GACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCG...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp TTCATGATGTTTGTGTTCAATTTCAAGATCCATTTCTTCAGGGAGTaGGGTCCATCTTCAAGACTTACGCCAGGAGACTGCACTGCAGAG +
Preference number: 2 (lower is better)
Translates to: FMMFVFNFKIHFFRE*GPSSRLTPGDCTAE
Trigger: CTCTGCAGTGCAGTCTCCTGGCGTAAGTCTTGAAGATGGACCCAACTCCCTGAAGAAATGGATCTTGAAATTGAACACAAACATCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCTGCTTGTGTGTTGTGTaGTACCAGAGCCAATTCAGA +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLCLCVV*YQSQFR
Trigger: TCTGAATTGGCTCTGGTATCACACAACACACAAGCA...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATGGCAGAGGCAAAGAATaGGCCCAGAGCCTGAGATTC +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDGRGKE*AQSLRF
Trigger: GAATCTCAGGCTCTGGGCTCATTCTTTGCCTCTGCC...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATTGGTCTCCACGCACGTaGTTGCCATCTCTGCTCTCA +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDWSPRT*LPSLLS
Trigger: TGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCA...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCCCCCAGACCTCAAGCTaGATCTTCCAAATGGTTGGT +
Preference number: 2 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAPQTSS*IFQMVG
Trigger: ACCAACCATTTGGAAGATGCAGCTTGAGGTCTGGGG...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTCGTGGAGCAATGTGGTaGACCTGCAGATGCCGCACT +
Preference number: 2 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGRGAMW*TCRCRT
Trigger: AGTGCGGCATCTGCAGGTGCACCACATTGCTCCACG...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGTTCTGTCCAATACCTTaGTCTAATTCCAATTCATTC +
Preference number: 2 (lower is better)
Translates to: SLAVFASDASKEAPVVALFCPIP*SNSNSF
Trigger: GAATGAATTGGAATTAGAGCAAGGTATTGGACAGAA...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATGTGATGACTGGAACCTaGGCCTTCATTACGGGCTCC +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDVMTGT*AFITGS
Trigger: GGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCAC...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGATGCTGGTCTCTTCTaGACACACCGTGGAGCAATG +
Preference number: 2 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVDAGLF*THRGAM
Trigger: CATTGCTCCACGGTGTGTTCAGAAGAGACCAGCATC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAGAGAGGAACAGTCGATaGAAGCTCATCTCACAAATC +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRERNSR*KLISQI
Trigger: GATTTGTGAGATGAGCTTGCATCGACTGTTCCTCTC...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATGAATGCCAGCTCTCATaGCCTCACCTAGAAACGCCT +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDECQLS*PHLETP
Trigger: AGGCGTTTCTAGGTGAGGGCATGAGAGCTGGCATTC...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGATTTCTTCAGGGAGTTaGGTCCATCTTCAAGACTTA +
Preference number: 2 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQISSGS*VHLQDL
Trigger: TAAGTCTTGAAGATGGACCCAACTCCCTGAAGAAAT...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCCAAAATTGTTCTTCGTaGACAGGTCAAATGACTGAT +
Preference number: 2 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIQNCSS*TGQMTD
Trigger: ATCAGTCATTTGACCTGTCCACGAAGAACAATTTTG...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTCGTGAGACACAGGTGTaGTGGAGGCATTATGAGGGG +
Preference number: 2 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGRETQV*WRHYEG
Trigger: CCCCTCATAATGCCTCCACCACACCTGTGTCTCACG...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 90 bp CTCCTGGCCATTACTGCTTGCTTTTATGTACTGAAAAGTCATCCATaGAATGGTCTGTTCCTGAATGTCGCCACAAAGCAGTCTGTAAAA +
Preference number: 2 (lower is better)
Translates to: LLAITACFYVLKSHP*NGLFLNVATKQSVK
Trigger: TTTTACAGACTGCTTTGTGGCGACATTCAGGAACAGACCATTCAATGGATGACTTTTCAGTACATAAAAGCAAGCAGTAATGGCCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCCGTGGACAGGTCAAATaGCTGATGAGAAAGAGGTCC +
Preference number: 2 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVRGQVK*LMRKRS
Trigger: GGACCTCTTTCTCATCAGTCATTTGACCTGTCCACG...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGACAGTCATATACAGCTaGAACTACATTTCTCAAGCT +
Preference number: 2 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQTVIYS*NYISQA
Trigger: AGCTTGAGAAATGTAGTTTCAGCTGTATATGACTGT...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR-3UTR GCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCGCTTTTACAAAGCTTTaGATGCATTTGTTTAGAGGA +
Preference number: 2 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIAFTKL*MHLFRG
Trigger: TCCTCTAAACAAATGCATGCAAAGCTTTGTAAAAGC...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTCAGAGTTCAGGTGAATaGCGTAACTCAGCATCACGG +
Preference number: 2 (lower is better)
Translates to: FLENSFAISLVTPKLQNIQSSGE*RNSASR
Trigger: CCGTGATGCTGAGTTACGCCATTCACCTGAACTCTG...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTGGATCCTGTGATGACTaGAACCTGGGCCTTCATTAC +
Preference number: 2 (lower is better)
Translates to: FLENSFAISLVTPKLQNIGSCDD*NLGLHY
Trigger: GTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCC...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGGATCCTGTGATGACTaGAACCTGGGCCTTCATTAC +
Preference number: 2 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVGSCDD*NLGLHY
Trigger: GTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGCATTTTATCAGGGGTaGCTTTGGCTGTCACTGCTG +
Preference number: 2 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGAFYQG*LWLSLL
Trigger: CAGCAGTGACAGCCAAAGTCACCCCTGATAAAATGC...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAGCTATTTCCAGATACTaGAAAGATCTAAGTAGGTGC +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRAISRY*KDLSRC
Trigger: GCACCTACTTAGATCTTTTCAGTATCTGGAAATAGC...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCTGTTTGGCAAAGATCTaGCTAAAACTAGTACTATGG +
Preference number: 2 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLCLAKI*LKLVLW
Trigger: CCATAGTACTAGTTTTAGCCAGATCTTTGCCAAACA...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCCAGGCTGTACGTTCATaGTGTTTGTGTTCAATTTCA +
Preference number: 2 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAQAVRS*CLCSIS
Trigger: TGAAATTGAACACAAACATCATGAACGTACAGCCTG...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGATTTTCACTTTATCTCTaGCAACCAAGGGTTACAGAA +
Preference number: 2 (lower is better)
Translates to: VISPKALFTLSLATKGYRFSLYL*QPRVTE
Trigger: TTCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAA...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGACAAAATTGTTCTTCGTaGACAGGTCAAATGACTGAT +
Preference number: 2 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRQNCSS*TGQMTD
Trigger: ATCAGTCATTTGACCTGTCCACGAAGAACAATTTTG...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTTGCTTTAGAGAAAGCTaGATTAAATCTCTTGAGCAG +
Preference number: 2 (lower is better)
Translates to: KLYDSYPVKSFTNTALGACFRES*IKSLEQ
Trigger: CTGCTCAAGAGATTTAATCCAGCTTTCTCTAAAGCA...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGGACTCCCAGCAGTGTTaGATTTTCATTATTTCTGAA +
Preference number: 2 (lower is better)
Translates to: QISLKVRIFLCHLELQNRDSQQC*IFIISE
Trigger: TTCAGAAATAATGAAAATCCAACACTGCTGGGAGTC...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR CAA 90 bp ACATACTTTATTAGTTTTATCTTTGTTCAGCCCACCAACAAAAATTaGGAAAGATTGCTACACATGACAGAGCGACAGTACCCTAGGGTG +
Preference number: 2 (lower is better)
Translates to: TYFISFIFVQPTNKN*ERLLHMTERQYPRV
Trigger: CACCCTAGGGTACTGTCGCTCTGTCATGTGTAGCAATCTTTCCAAATTTTTGTTGGTGGGCTGAACAAAGATAAAACTAATAAAGTATGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTTGCACATTCAGGATGTaGCTTCAGCTTCATTCATCC +
Preference number: 2 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGCTFRM*LQLHSS
Trigger: GGATGAATGAAGCTGAAGTCACATCCTGAATGTGCA...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGCCCCTCAAGAGACGTaGAAACCAAAGTATTTGTTT +
Preference number: 2 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVAPQET*KPKYLF
Trigger: AAACAAATACTTTGGTTTGCACGTCTCTTGAGGGGC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATTTACTAACACAGCCCTaGGTGCTATTTCCAGATACT +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDLLTQP*VLFPDT
Trigger: AGTATCTGGAAATAGCACCCAGGGCTGTGTTAGTAA...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR TCA 90 bp AAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAATATTAAGCTCTATAGTTGAGTACCTCTTATaGTTGCCCATAAGAAGCTGT +
Preference number: 2 (lower is better)
Translates to: KSKSNYSCVTLSRILSSIVEYLL*LPIRSC
Trigger: ACAGCTTCTTATGGGCAATCATAAGAGGTACTCAAC...TATAGAGCTTAATATTCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
3UTR-3UTR GCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTCTTCACTGGATACCTTaGTTCACACTTTGGTCAATA +
Preference number: 2 (lower is better)
Translates to: FLENSFAISLVTPKLQNILHWIP*FTLWSI
Trigger: TATTGACCAAAGTGTGAAGCAAGGTATCCAGTGAAG...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR GCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATCTTCACTGGATACCTTaGTTCACACTTTGGTCAATA +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDLHWIP*FTLWSI
Trigger: TATTGACCAAAGTGTGAAGCAAGGTATCCAGTGAAG...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATCATCTTCCAAATGGTTaGTGTCTTTTTAAGAGTCCC +
Preference number: 2 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDHLPNG*CLFKSP
Trigger: GGGACTCTTAAAAAGACACCAACCATTTGGAAGATG...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTCTAGAGAATCTTCACTaGATACCTTGCTTCACACTT +
Preference number: 2 (lower is better)
Translates to: FLENSFAISLVTPKLQNILENLH*IPCFTL
Trigger: AAGTGTGAAGCAAGGTATCCAGTGAAGATTCTCTAG...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTAGGCAATTCAAAACTTaGCGCTCACTTAGTTATTTC +
Preference number: 2 (lower is better)
Translates to: FLENSFAISLVTPKLQNIRQFKT*RSLSYF
Trigger: GAAATAACTAAGTGAGCGCCAAGTTTTGAATTGCCT...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CCA 90 bp AAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAATATTAAGCTCTATAGAATCATATGTAAAATaGCCGGCAGGTAGCAATTGT +
Preference number: 2 (lower is better)
Translates to: KSKSNYSCVTLSRILSSIESYVK*PAGSNC
Trigger: ACAATTGCTACCTGCCGGCCATTTTACATATGATTC...TATAGAGCTTAATATTCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366905.3
3UTR-3UTR CAA 90 bp CCCCTTGGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGAGGCGAGGCAGCCCCTaGGCCCGGGCCACCTGCATG +
Preference number: 3 (lower is better)
Translates to: PLGPGHLHADLMLLLREPRRGSP*ARATCM
Trigger: CATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCT...CGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366911.9
ENST00000436279.1
3UTR CCA 72 bp GGTGCTTCATGCCCTGTGCAGGGTGGGCAGATGTGCTaGGCGCTCCCATCAAGCCTGCCTGCAGGGCCGCCA +
Preference number: 3 (lower is better)
Translates to: GASCPVQGGQMC*ALPSSLPAGPP
Trigger: TGGCGGCCCTGCAGGCAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TGGGCAGATGTGCTGGGCGCTCCCATCAAGCCTGCCTaGAGGGCCGCCAGCGAGTTAACTCAGGCCCTAGGC +
Preference number: 3 (lower is better)
Translates to: WADVLGAPIKPA*RAASELTQALG
Trigger: GCCTAGGGCCTGAGTTAACTCGCTGGCGGCCCTGCAGGCAGGCTTGATGGGAGCGCCCAGCACATCTGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp AGGGTGGGCAGATGTGCTGGGCGCTCCCATCAAGCCTaGCTGCAGGGCCGCCAGCGAGTTAACTCAGGCCCT +
Preference number: 3 (lower is better)
Translates to: RVGRCAGRSHQA*LQGRQRVNSGP
Trigger: AGGGCCTGAGTTAACTCGCTGGCGGCCCTGCAGGCAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp GATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTaGGCAGATGTGCTGGGCGCTCCCATCAAGCCTGCC +
Preference number: 3 (lower is better)
Translates to: DLCTRCFMPCAG*ADVLGAPIKPA
Trigger: GGCAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAACTCCAAGGACCCCTCTaGCCTAAGGTCACGTCCTGG +
Preference number: 3 (lower is better)
Translates to: LALSSTCQHSSAASAPCQLQGPL*PKVTSW
Trigger: CCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAG...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGGAAGCCCATTCTGTTTaGCTTGGGGACCAGCCAGAC +
Preference number: 3 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAEAHSV*LGDQPD
Trigger: GTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTC...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp ACACCTCCGCGGCAGCTGCCTCCCGTGAGTAGGATCTaGAACACCAAAGCCACGGGCAAGGGCAGGATGGAG +
Preference number: 3 (lower is better)
Translates to: TPPRQLPPVSRI*NTKATGKGRME
Trigger: CTCCATCCTGCCCTTGCCCGTGGCTTTGGTGTTTCAGATCCTACTCACGGGAGGCAGCTGCCGCGGAGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTaGAGGGTGGGCAGATGTGCTGGGCGCTCCCATCAA +
Preference number: 3 (lower is better)
Translates to: AHRSLHTVLHAL*RVGRCAGRSHQ
Trigger: TTGATGGGAGCGCCCAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GGCTTTTGCCCACAGATCTCTGCACACGGTGCTTCATaGCCTGTGCAGGGTGGGCAGATGTGCTGGGCGCTC +
Preference number: 3 (lower is better)
Translates to: GFCPQISAHGAS*PVQGGQMCWAL
Trigger: GAGCGCCCAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCCACCTaGATGCTGATCTCATGCTTCTTCTCCGTGAACCGT +
Preference number: 3 (lower is better)
Translates to: CLRRGSPLARAT*MLISCFFSVNR
Trigger: ACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366911.9
ENST00000436279.1
3UTR CCA 72 bp TGGCGTAACTCAGCATCACGGACCCCTCCGAGAGACTaGCCCGATAATCCAGGCGCAGGTCCACTAGGGCGT +
Preference number: 3 (lower is better)
Translates to: WRNSASRTPPRD*PDNPGAGPLGR
Trigger: ACGCCCTAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGCTGAGTTACGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp ACTTCTCGGGGTAGTCCCGGAGGTGCTGCAAACTGGTaGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCG +
Preference number: 3 (lower is better)
Translates to: TSRGSPGGAANW*QPSCDPAPTCA
Trigger: CGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACTACCCCGAGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR GCA 72 bp CACTGCAGAGACCGAGCGAAACTCTCCCTTGCTGTGTaGCAGGGACACGCTTCGTTGGTCTCCACGCACGTG +
Preference number: 3 (lower is better)
Translates to: HCRDRAKLSLAV*QGHASLVSTHV
Trigger: CACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCTCGGTCTCTGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp CGTCCTGGGCTTTTGCCCACAGATCTCTGCACACGGTaGTTCATGCCCTGTGCAGGGTGGGCAGATGTGCTG +
Preference number: 3 (lower is better)
Translates to: RPGLLPTDLCTR*FMPCAGWADVL
Trigger: CAGCACATCTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAATCTCCACGCACGTGCTaGCCATCTCTGCTCTCACAA +
Preference number: 3 (lower is better)
Translates to: LALSSTCQHSSAASAPCQSPRTC*PSLLSQ
Trigger: TTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGA...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGAGGCACTGTGCTGGCTaGGGGGATCCTGTGATGACT +
Preference number: 3 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRRHCAG*GDPVMT
Trigger: AGTCATCACAGGATCCCCCAAGCCAGCACAGTGCCT...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp CCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTaGCATCTCTGCTCTCACAAATGCTCACGGGCTCCT +
Preference number: 3 (lower is better)
Translates to: PGTRFVGLHARA*HLCSHKCSRAP
Trigger: AGGAGCCCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTaGTTGCCATCTCTGCTCTCACAAATGCTCACGGGC +
Preference number: 3 (lower is better)
Translates to: CARDTLRWSPRT*LPSLLSQMLTG
Trigger: GCCCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GAGACTGCACTGCAGAGACCGAGCGAAACTCTCCCTTaGTGTGTGCCAGGGACACGCTTCGTTGGTCTCCAC +
Preference number: 3 (lower is better)
Translates to: ETALQRPSETLP*CVPGTRFVGLH
Trigger: GTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCTCGGTCTCTGCAGTGCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp CTAAGGTCACGTCCTGGGCTTTTGCCCACAGATCTCTaGACACGGTGCTTCATGCCCTGTGCAGGGTGGGCA +
Preference number: 3 (lower is better)
Translates to: LRSRPGLLPTDL*TRCFMPCAGWA
Trigger: TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATaGCAGCTCTCATGCCCTCACCTAGAAACGCCTTCT +
Preference number: 3 (lower is better)
Translates to: GAPADAALSSLE*QLSCPHLETPS
Trigger: AGAAGGCGTTTCTAGGTGAGGGCATGAGAGCTGGCATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GAAGCTCCAGTTGTAGCCTTGGCACAGCTGAGGCCATaGCATTGCTACCCGGAAGCTGGCTCTGCAGCGTTG +
Preference number: 3 (lower is better)
Translates to: EAPVVALAQLRP*HCYPEAGSAAL
Trigger: CAACGCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCTACAACTGGAGCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp AGTCCCGGAGGTGCTGCAAACTGGTGGCAACCGTCTTaGGATCCTGCTCCCACTTGCGCGAACAGAAGACCA +
Preference number: 3 (lower is better)
Translates to: SPGGAANWWQPS*DPAPTCANRRP
Trigger: TGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR CCA 72 bp CCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATaGCCCGTCACGTCTGGGGATGACCCTGCACTGCTC +
Preference number: 3 (lower is better)
Translates to: PCFYKLQESPRI*PVTSGDDPALL
Trigger: GAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp CCTCACCTAGAAACGCCTTCTCGGCTGAATGGCTGTTaGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCG +
Preference number: 3 (lower is better)
Translates to: PHLETPSRLNGC*LSAAPVSIARP
Trigger: CGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCGAGAAGGCGTTTCTAGGTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp CAGGCACTGTGCTGGCTTGGGGGATCCTGTGATGACTaGAACCTGGGCCTTCATTACGGGCTCCGGTTTTGG +
Preference number: 3 (lower is better)
Translates to: QALCWLGGSCDD*NLGLHYGLRFW
Trigger: CCAAAACCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCAGCACAGTGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGTTATCAGGGGTGACTTaGGCTGTCACTGCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRLSGVT*AVTAER
Trigger: CCTCTCAGCAGTGACAGCCAAAGTCACCCCTGATAA...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGGGGTTAGGGCCCGTCTaGCTTTCATGTTCTTTTAAA +
Preference number: 3 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAGLGPV*LSCSFK
Trigger: TTTAAAAGAACATGAAAGCAAGACGGGCCCTAACCC...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGTGGAGTCCGAAAGCATaGGCAAAGCCAGCACATCTG +
Preference number: 3 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRWSPKA*AKPAHL
Trigger: CAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCCA...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGAGGCGAGGCAGCCCCTaGGCCCGGGCCACCTGCATG +
Preference number: 3 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQRRGSP*ARATCM
Trigger: CATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCT...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR GCA 72 bp CAGGGCCGCCAGCGAGTTAACTCAGGCCCTAGGCTCTaGAGTACGCTCTTCCCACAAGTCAGCCAGGATTTT +
Preference number: 3 (lower is better)
Translates to: QGRQRVNSGPRL*STLFPQVSQDF
Trigger: AAAATCCTGGCTGACTTGTGGGAAGAGCGTACTGCAGAGCCTAGGGCCTGAGTTAACTCGCTGGCGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp AGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTaGCAAGGCGTGACTAGGACCAGAAGAATCAGAAAG +
Preference number: 3 (lower is better)
Translates to: STCQHSSAASAP*QGVTRTRRIRK
Trigger: CTTTCTGATTCTTCTGGTCCTAGTCACGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp AGGTGCTGCAAACTGGTGGCAACCGTCTTGCGATCCTaGTCCCACTTGCGCGAACAGAAGACCATCTCGGTG +
Preference number: 3 (lower is better)
Translates to: RCCKLVATVLRS*SHLREQKTISV
Trigger: CACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR CCA 72 bp AACTCTCCCTTGCTGTGTGCCAGGGACACGCTTCGTTaGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCA +
Preference number: 3 (lower is better)
Translates to: NSPLLCARDTLR*SPRTCLPSLLS
Trigger: TGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp TGTGCTGGCTTGGGGGATCCTGTGATGACTGGAACCTaGGCCTTCATTACGGGCTCCGGTTTTGGAGTGCAG +
Preference number: 3 (lower is better)
Translates to: CAGLGDPVMTGT*AFITGSGFGVQ
Trigger: CTGCACTCCAAAACCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCAGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp AATACTTCTCGGGGTAGTCCCGGAGGTGCTGCAAACTaGTGGCAACCGTCTTGCGATCCTGCTCCCACTTGC +
Preference number: 3 (lower is better)
Translates to: NTSRGSPGGAAN*WQPSCDPAPTC
Trigger: GCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACTACCCCGAGAAGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR CAA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCATTATCAGGGGTGACTTaGGCTGTCACTGCTGAGAGG +
Preference number: 3 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWALSGVT*AVTAER
Trigger: CCTCTCAGCAGTGACAGCCAAAGTCACCCCTGATAA...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCAAGCCTGGGGGTTTTTaGTACATGGGATGTCGGCTC +
Preference number: 3 (lower is better)
Translates to: RSTRACSQTRKATHHAHLKPGGF*YMGCRL
Trigger: GAGCCGACATCCCATGTACAAAAAACCCCCAGGCTT...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCATTTTTGGCACCTGTaGGCTGACAGCAGTCTGCAA +
Preference number: 3 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKHFWHL*ADSSLQ
Trigger: TTGCAGACTGCTGTCAGCCAACAGGTGCCAAAAATG...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGATGTGTGGCCAGTTTTaGTATAGAGCTGTTCATTCC +
Preference number: 3 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAMCGQF*YRAVHS
Trigger: GGAATGAACAGCTCTATACAAAAACTGGCCACACAT...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp AAAAGAGGGGCTGATCCATCTCCCGTGAACATCTGTTaGCTGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTT +
Preference number: 3 (lower is better)
Translates to: KRGADPSPVNIC*LWAAWASLAVF
Trigger: AAACACAGCAAGGCTGGCCCAGGCCGCCCACAGTCAACAGATGTTCACGGGAGATGGATCAGCCCCTCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp ATAGAACAAGCAAAAGAGGGGCTGATCCATCTCCCGTaGACATCTGTTGACTGTGGGCGGCCTGGGCCAGCC +
Preference number: 3 (lower is better)
Translates to: IEQAKEGLIHLP*TSVDCGRPGPA
Trigger: GGCTGGCCCAGGCCGCCCACAGTCAACAGATGTTCACGGGAGATGGATCAGCCCCTCTTTTGCTTGTTCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GGGTCCATCTTCAAGACTTACGCCAGGAGACTGCACTaGAGAGACCGAGCGAAACTCTCCCTTGCTGTGTGC +
Preference number: 3 (lower is better)
Translates to: GSIFKTYARRLH*RDRAKLSLAVC
Trigger: GCACACAGCAAGGGAGAGTTTCGCTCGGTCTCTGCAGTGCAGTCTCCTGGCGTAAGTCTTGAAGATGGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp CACCATGCACACCTCCACTTCTCCAAGGACCCCTCTTaGCTAAGGTCACGTCCTGGGCTTTTGCCCACAGAT +
Preference number: 3 (lower is better)
Translates to: HHAHLHFSKDPS*LRSRPGLLPTD
Trigger: ATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAGAAGTGGAGGTGTGCATGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp AGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTaGAGTAAAATGGGAGCAGACAGGAGCCCGGAAGGA +
Preference number: 3 (lower is better)
Translates to: RPLEMLQGRTIP*SKMGADRSPEG
Trigger: TCCTTCCGGGCTCCTGTCTGCTCCCATTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp CTTCTCCAAGGACCCCTCTTGCCTAAGGTCACGTCCTaGGCTTTTGCCCACAGATCTCTGCACACGGTGCTT +
Preference number: 3 (lower is better)
Translates to: LLQGPLLPKVTS*AFAHRSLHTVL
Trigger: AAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAACAGGGACACGCTTCGTaGGTCTCCACGCACGTGCTT +
Preference number: 3 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKQGHAS*VSTHVL
Trigger: AAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTG...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCTGCATAACAAAATaGTTCTTCGTGGACAGGTCA +
Preference number: 3 (lower is better)
Translates to: LALSSTCQHSSAASAPCQGCITK*FFVDRS
Trigger: TGACCTGTCCACGAAGAACAATTTTGTTATGCAGCC...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp AATCCTACAGCCGATGAGCTGCAGAGTTCAGGTGAATaGCGTAACTCAGCATCACGGACCCCTCCGAGAGAC +
Preference number: 3 (lower is better)
Translates to: NPTADELQSSGE*RNSASRTPPRD
Trigger: GTCTCTCGGAGGGGTCCGTGATGCTGAGTTACGCCATTCACCTGAACTCTGCAGCTCATCGGCTGTAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp GTTCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTaGGGACCAGCCAGACCACTCCTCCACTCCAGTGGG +
Preference number: 3 (lower is better)
Translates to: VLKPMRSPFCFA*GPARPLLHSSG
Trigger: CCCACTGGAGTGGAGGAGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACCTCCCCATCCGGCCTaGAGACCAGACTCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: YLWQPRVTENSAPKDERGPPHPA*RPDSLA
Trigger: AGCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCATCGGTCCAAGTGCCATaGGTGTCTTGGCCTAAGATG +
Preference number: 3 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPSVQVP*VSWPKM
Trigger: CATCTTAGGCCAAGACACCAATGGCACTTGGACCGA...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp GAAGCCCCTGAATGGTCCCTTGGCAGAGGCAAAGAATaGGCCCAGAGCCTGAGATTCAAGATGCTGGTCTCT +
Preference number: 3 (lower is better)
Translates to: EAPEWSLGRGKE*AQSLRFKMLVS
Trigger: AGAGACCAGCATCTTGAATCTCAGGCTCTGGGCTCATTCTTTGCCTCTGCCAAGGGACCATTCAGGGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp AGAGGCCACCAGTTCCCCAAGGTTCCCTTCGGATGGTaGCACCTCCCTGAGTCAGTCATTCAGTTTCTGCTT +
Preference number: 3 (lower is better)
Translates to: RGHQFPKVPFGW*HLPESVIQFLL
Trigger: AAGCAGAAACTGAATGACTGACTCAGGGAGGTGTCACCATCCGAAGGGAACCTTGGGGAACTGGTGGCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR TCA 72 bp GCCCTGAGTACCGCAGATGACTCTGATTCAGCTATGTaGCACAGGCTCAACCGCTACACGCTGCAGTGTGTT +
Preference number: 3 (lower is better)
Translates to: ALSTADDSDSAM*HRLNRYTLQCV
Trigger: AACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCACATAGCTGAATCAGAGTCATCTGCGGTACTCAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR CCA 72 bp AGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAATaGGAGCAGACAGGAGCCCGGAAGGAAGGCAGAAGC +
Preference number: 3 (lower is better)
Translates to: RCYRAELFRGVK*EQTGARKEGRS
Trigger: GCTTCTGCCTTCCTTCCGGGCTCCTGTCTGCTCCCATTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp GAGCTACGTCAGTTAAGGCATCGTGAGACACAGGTGTaGTGGAGGCATTATGAGGGGACTACTCCACAGGAC +
Preference number: 3 (lower is better)
Translates to: ELRQLRHRETQV*WRHYEGTTPQD
Trigger: GTCCTGTGGAGTAGTCCCCTCATAATGCCTCCACCACACCTGTGTCTCACGATGCCTTAACTGACGTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp TGTGAGCTCAGGAGCCCATCCCTGTGCTCAGAGAGATaGGACTCCAATGAGGAGACACACTATGTAGGTGCA +
Preference number: 3 (lower is better)
Translates to: CELRSPSLCSER*DSNEETHYVGA
Trigger: TGCACCTACATAGTGTGTCTCCTCATTGGAGTCCCATCTCTCTGAGCACAGGGATGGGCTCCTGAGCTCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCCTCCAAGGACCCCTCTaGCCTAAGGTCACGTCCTGG +
Preference number: 3 (lower is better)
Translates to: GKHPSEMKPISCPHSHHILQGPL*PKVTSW
Trigger: CCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAG...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGCAGGAGTACCCGTGGTaGTCTGTGTCATTAAGGGCG +
Preference number: 3 (lower is better)
Translates to: SLAVFASDASKEAPVVALQEYPW*SVSLRA
Trigger: CGCCCTTAATGACACAGACAACCACGGGTACTCCTG...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp TGCCATTGCTACCCGGAAGCTGGCTCTGCAGCGTTGTaGCTTAGACACTTTACAAGTCTGAGCCATCCCGTA +
Preference number: 3 (lower is better)
Translates to: CHCYPEAGSAAL*LRHFTSLSHPV
Trigger: TACGGGATGGCTCAGACTTGTAAAGTGTCTAAGTCACAACGCTGCAGAGCCAGCTTCCGGGTAGCAATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TGTTGGCTGACAGCAGTCTGCAAAGGCCGCTGGAGATaGTACAGGGCAGAACTATTCCGTGGAGTAAAATGG +
Preference number: 3 (lower is better)
Translates to: CWLTAVCKGRWR*YRAELFRGVKW
Trigger: CCATTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTCAGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp CTACGTCAGTTAAGGCATCGTGAGACACAGGTGTGGTaGAGGCATTATGAGGGGACTACTCCACAGGACCTT +
Preference number: 3 (lower is better)
Translates to: LRQLRHRETQVW*RHYEGTTPQDL
Trigger: AAGGTCCTGTGGAGTAGTCCCCTCATAATGCCTCCACCACACCTGTGTCTCACGATGCCTTAACTGACGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp GACCATCTCGGTGAAGTACCACATCCAGCCGATAATTaGGACATAGGCCAGCTCTTTCTTGGCCAGGACCTT +
Preference number: 3 (lower is better)
Translates to: DHLGEVPHPADN*DIGQLFLGQDL
Trigger: AAGGTCCTGGCCAAGAAAGAGCTGGCCTATGTCCCAATTATCGGCTGGATGTGGTACTTCACCGAGATGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR-3UTR CAA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTCCTCCCCATCCGGCCTaGAGACCAGACTCCCTGGCT +
Preference number: 3 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAPPHPA*RPDSLA
Trigger: AGCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGG...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGGATGAAACCAATTTCTaGTCCACACAGCCACCATAT +
Preference number: 3 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRDETNF*STQPPY
Trigger: ATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATC...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp CCCTGCCCTCCCCTGCAGCCTAAAATACCCTTTCTATaGTCACAGAACAAAGTTCACACTCACCACACAGCC +
Preference number: 3 (lower is better)
Translates to: PCPPLQPKIPFL*SQNKVHTHHTA
Trigger: GGCTGTGTGGTGAGTGTGAACTTTGTTCTGTGATCATAGAAAGGGTATTTTAGGCTGCAGGGGAGGGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TTTTGCATTTTTGGCACCTGTTGGCTGACAGCAGTCTaGAAAGGCCGCTGGAGATGCTACAGGGCAGAACTA +
Preference number: 3 (lower is better)
Translates to: FCIFGTCWLTAV*KGRWRCYRAEL
Trigger: TAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTCAGCCAACAGGTGCCAAAAATGCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTaGTCTCCAGATTTCACTCAAGGTTCGTATTTTTCT +
Preference number: 3 (lower is better)
Translates to: GYGPSRLGMTLH*SPDFTQGSYFS
Trigger: AGAAAAATACGAACCTTGAGTGAAATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp ATAAGTTCTAAAGCCTATGCGAAGCCCATTCTGTTTTaGTTGGGGACCAGCCAGACCACTCCTCCACTCCAG +
Preference number: 3 (lower is better)
Translates to: ISSKAYAKPILF*LGTSQTTPPLQ
Trigger: CTGGAGTGGAGGAGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGAACTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GAACCTGGGCCTTCATTACGGGCTCCGGTTTTGGAGTaGAGAGGGATTGGCATTTGTAAAGACTGCTTGCTT +
Preference number: 3 (lower is better)
Translates to: EPGPSLRAPVLE*RGIGICKDCLL
Trigger: AAGCAAGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCAAAACCGGAGCCCGTAATGAAGGCCCAGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCGATGTCGGCTCTGATTaGACCCTCATCAGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIDVGSD*TLIRAG
Trigger: TCCTGCTCTGATGAGGGTCAAATCAGAGCCGACATC...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GTGACTTTGGCTGTCACTGCTGAGAGGAACAGTCGATaGAAGCTCATCTCACAAATCACTGCAGAATGCCCA +
Preference number: 3 (lower is better)
Translates to: VTLAVTAERNSR*KLISQITAECP
Trigger: TGGGCATTCTGCAGTGATTTGTGAGATGAGCTTGCATCGACTGTTCCTCTCAGCAGTGACAGCCAAAGTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TGGAAGAAGTCCATTAAATTCCCTGCTTCTATAAGCTaGAGGAGTCGCCTAGGATATGGCCCGTCACGTCTG +
Preference number: 3 (lower is better)
Translates to: WKKSIKFPASIS*RSRLGYGPSRL
Trigger: CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAATTTAATGGACTTCTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCGGGCTCACCCAGCCTTaGTCACCGTGTCCCACTAAG +
Preference number: 3 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAGLTQP*SPCPTK
Trigger: CTTAGTGGGACACGGTGACAAAGGCTGGGTGAGCCC...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGGGCTGCATAACAAAATaGTTCTTCGTGGACAGGTCA +
Preference number: 3 (lower is better)
Translates to: SLAVFASDASKEAPVVALGCITK*FFVDRS
Trigger: TGACCTGTCCACGAAGAACAATTTTGTTATGCAGCC...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp TGGAGTCCGAAAGCATTGGCAAAGCCAGCACATCTGTaGGCATGTTACACATGGGCTTGCCTAAGTATTTCC +
Preference number: 3 (lower is better)
Translates to: WSPKALAKPAHL*ACYTWACLSIS
Trigger: GGAAATACTTAGGCAAGCCCATGTGTAACATGCTCACAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TGCGCACCTGGAGAAAGACATATCCTTCCTAACTCATaGTCCAAATACCTATCGGTCCAAGTGCCATTGGTG +
Preference number: 3 (lower is better)
Translates to: CAPGERHILPNS*SKYLSVQVPLV
Trigger: CACCAATGGCACTTGGACCGATAGGTATTTGGAGCATGAGTTAGGAAGGATATGTCTTTCTCCAGGTGCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp AAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCAGGCTaGATAACAAAATTGTTCTTCGTGGACAGGTCAAAT +
Preference number: 3 (lower is better)
Translates to: KGAGCKETRFPG*ITKLFFVDRSN
Trigger: ATTTGACCTGTCCACGAAGAACAATTTTGTTATGCAGCCTGGGAACCTGGTTTCCTTACACCCTGCGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp CTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATaGTGGCAGAATCAGTCCAGTCCCCCAGACCTCAAG +
Preference number: 3 (lower is better)
Translates to: LTSSSRLIVFTI*WQNQSSPPDLK
Trigger: CTTGAGGTCTGGGGGACTGGACTGATTCTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGACCCATTCTGTTTTGCTaGGGGACCAGCCAGACCACT +
Preference number: 3 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRPILFC*GTSQTT
Trigger: AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGG...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGATTTTCAGCAGCTGGCTaGAAGCCCCTGAATGGTCCC +
Preference number: 3 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRFSAAG*KPLNGP
Trigger: GGGACCATTCAGGGGCTTCAAGCCAGCTGCTGAAAA...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGGGCTCACCCAGCCTTaGTCACCGTGTCCCACTAAG +
Preference number: 3 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVGLTQP*SPCPTK
Trigger: CTTAGTGGGACACGGTGACAAAGGCTGGGTGAGCCC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAAAGCCTGGGGGTTTTTaGTACATGGGATGTCGGCTC +
Preference number: 3 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRKPGGF*YMGCRL
Trigger: GAGCCGACATCCCATGTACAAAAAACCCCCAGGCTT...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp CTGCATTTTATCAGGGGTGACTTTGGCTGTCACTGCTaGGAGGAACAGTCGATGCAAGCTCATCTCACAAAT +
Preference number: 3 (lower is better)
Translates to: LHFIRGDFGCHC*EEQSMQAHLTN
Trigger: ATTTGTGAGATGAGCTTGCATCGACTGTTCCTCTCAGCAGTGACAGCCAAAGTCACCCCTGATAAAATGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GAGGAACAGTCGATGCAAGCTCATCTCACAAATCACTaGAGAATGCCCAGGCTGTACGTTCATGATGTTTGT +
Preference number: 3 (lower is better)
Translates to: EEQSMQAHLTNH*RMPRLYVHDVC
Trigger: ACAAACATCATGAACGTACAGCCTGGGCATTCTGCAGTGATTTGTGAGATGAGCTTGCATCGACTGTTCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GCTCTCCAGATTTCACTCAAGGTTCGTATTTTTCTCTaGCACCTTGAACTACAGAACAGGCTCTCAGTAGCG +
Preference number: 3 (lower is better)
Translates to: ALQISLKVRIFL*HLELQNRLSVA
Trigger: CGCTACTGAGAGCCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTGGAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TGGAGTGCAGAGGGATTGGCATTTGTAAAGACTGCTTaGTTACCCTTTGTCTGGCATGCACATTCAGGATGT +
Preference number: 3 (lower is better)
Translates to: WSAEGLAFVKTA*LPFVWHAHSGC
Trigger: ACATCCTGAATGTGCATGCCAGACAAAGGGTAAGCAAGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GTTTTGGAGTGCAGAGGGATTGGCATTTGTAAAGACTaGTTGCTTACCCTTTGTCTGGCATGCACATTCAGG +
Preference number: 3 (lower is better)
Translates to: VLECRGIGICKD*LLTLCLACTFR
Trigger: CCTGAATGTGCATGCCAGACAAAGGGTAAGCAAGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp CAAATGGTTGGTGTCTTTTTAAGAGTCCCCGTGGGCTaGCTTTCCTGGAAGAAGTCCATTAAATTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: QMVGVFLRVPVG*LSWKKSIKFPA
Trigger: AGCAGGGAATTTAATGGACTTCTTCCAGGAAAGCCAGCCCACGGGGACTCTTAAAAAGACACCAACCATTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTCAGGGACACGCTTCGTaGGTCTCCACGCACGTGCTT +
Preference number: 3 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGQGHAS*VSTHVL
Trigger: AAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTG...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp CTGCATAACAAAATTGTTCTTCGTGGACAGGTCAAATaGCTGATGAGAAAGAGGTCCAGATCTCTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: LHNKIVLRGQVK*LMRKRSRSLPS
Trigger: GCTGGGGAGAGATCTGGACCTCTTTCTCATCAGTCATTTGACCTGTCCACGAAGAACAATTTTGTTATGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCTCGGTCCAAGTGCCATaGGTGTCTTGGCCTAAGATG +
Preference number: 3 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVSVQVP*VSWPKM
Trigger: CATCTTAGGCCAAGACACCAATGGCACTTGGACCGA...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCTGGAGTGCAGAGGGATaGGCATTTGTAAAGACTGCT +
Preference number: 3 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAWSAEG*AFVKTA
Trigger: AGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCA...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GTGGGAACCTGGATGTCCTTTCCTGGAGAACAGCTTTaGTATTTCACTGGTAACTCCGAAACTTCAAAATAT +
Preference number: 3 (lower is better)
Translates to: VGTWMSFPGEQL*YFTGNSETSKY
Trigger: ATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAAAGGACATCCAGGTTCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp ATCCACCCAATCCACACGTTCTCTCAAAGACTAGCATaGTTCTGTCCAATACCTTGCTCTAATTCCAATTCA +
Preference number: 3 (lower is better)
Translates to: IHPIHTFSQRLA*FCPIPCSNSNS
Trigger: TGAATTGGAATTAGAGCAAGGTATTGGACAGAACCATGCTAGTCTTTGAGAGAACGTGTGGATTGGGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCTGGGAACCAAAGCAGTaGTTGTGTGCTGAGGAGATG +
Preference number: 3 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVWEPKQ*LCAEEM
Trigger: CATCTCCTCAGCACACAACAACTGCTTTGGTTCCCA...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTTGGAGTCCGAAAGCATaGGCAAAGCCAGCACATCTG +
Preference number: 3 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGWSPKA*AKPAHL
Trigger: CAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCCA...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp CCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTaGAAAGATACAGAGAGAATGGCATTCCAAAATTCC +
Preference number: 3 (lower is better)
Translates to: PVLVHQLSFLMI*KDTERMAFQNS
Trigger: GGAATTTTGGAATGCCATTCTCTCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp CCACATTCTCTTTCGGCTCTAAGGCAATTCAAAACTTaGCGCTCACTTAGTTATTTCCTAAGAGATTTCTGC +
Preference number: 3 (lower is better)
Translates to: PHSLSALRQFKT*RSLSYFLRDFC
Trigger: GCAGAAATCTCTTAGGAAATAACTAAGTGAGCGCCAAGTTTTGAATTGCCTTAGAGCCGAAAGAGAATGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CCA 72 bp TGCTTGCTTTTATGTACTGAAAAGTCATCCATTGAATaGTCTGTTCCTGAATGTCGCCACAAAGCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: CLLLCTEKSSIE*SVPECRHKAVC
Trigger: ACAGACTGCTTTGTGGCGACATTCAGGAACAGACCATTCAATGGATGACTTTTCAGTACATAAAAGCAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCCAATTCAGAAGAAAATaGAATGTCTGTGGGCCCCCG +
Preference number: 3 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVQFRRK*NVCGPP
Trigger: CGGGGGCCCACAGACATTCAATTTTCTTCTGAATTG...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCAAGCTTTGCATGCATTaGTTTAGAGGATATTGCAGT +
Preference number: 3 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLKLCMH*FRGYCS
Trigger: ACTGCAATATCCTCTAAACAAATGCATGCAAAGCTT...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGCTGGATTAAATCTCTaGAGCAGAAGTAGAGACCCT +
Preference number: 3 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVAGLNL*SRSRDP
Trigger: AGGGTCTCTACTTCTGCTCAAGAGATTTAATCCAGC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR-3UTR CAA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTCAAATTGTACGTCTGTaGTTTTCAAAAGCCATTGTG +
Preference number: 3 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAQIVRL*FSKAIV
Trigger: CACAATGGCTTTTGAAAACAACAGACGTACAATTTG...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR TCA 72 bp GAATCATATGTAAAATGGCCGGCAGGTAGCAATTGTTaGGTACCTCTTATGATTGCCCATAAGAAGCTGTTA +
Preference number: 3 (lower is better)
Translates to: ESYVKWPAGSNC*VPLMIAHKKLL
Trigger: TAACAGCTTCTTATGGGCAATCATAAGAGGTACTCAACAATTGCTACCTGCCGGCCATTTTACATATGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366905.3
3UTR CCA 72 bp GCAAAGATACAGAGAGAATGGCATTCCAAAATTCCATaGATGACTTTTCTGAATGTCCTAGAATGTTTGGCA +
Preference number: 3 (lower is better)
Translates to: AKIQREWHSKIP*MTFLNVLECLA
Trigger: TGCCAAACATTCTAGGACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp GAAGTAGAGACCCTAGAGAATCTTCACTGGATACCTTaGTTCACACTTTGGTCAATATTTATGAATAAGTTC +
Preference number: 3 (lower is better)
Translates to: EVETLENLHWIP*FTLWSIFMNKF
Trigger: GAACTTATTCATAAATATTGACCAAAGTGTGAAGCAAGGTATCCAGTGAAGATTCTCTAGGGTCTCTACTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TTCAGTCAGTTTTATTACATCCAGTCCAGTAAGCTGTaGTGTCTAGTGGTATCCACACATACTTTATTAGTT +
Preference number: 3 (lower is better)
Translates to: FSQFYYIQSSKL*CLVVSTHTLLV
Trigger: AACTAATAAAGTATGTGTGGATACCACTAGACAGCACAGCTTACTGGACTGGATGTAATAAAACTGACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TTTACAAAGCTTTGCATGCATTTGTTTAGAGGATATTaGAGTCGAGATATTCCAGTACTACTGTGTGATCAT +
Preference number: 3 (lower is better)
Translates to: FTKLCMHLFRGY*SRDIPVLLCDH
Trigger: ATGATCACACAGTAGTACTGGAATATCTCGACTGCAATATCCTCTAAACAAATGCATGCAAAGCTTTGTAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR GCA 72 bp TTCTCTCAAAGACTAGCATGGTTCTGTCCAATACCTTaGTCTAATTCCAATTCATTCGTTCTCATAACTTAT +
Preference number: 3 (lower is better)
Translates to: FSQRLAWFCPIP*SNSNSFVLITY
Trigger: ATAAGTTATGAGAACGAATGAATTGGAATTAGAGCAAGGTATTGGACAGAACCATGCTAGTCTTTGAGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCCCTTGGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGGGCGAGGCAGCCCCTTaGCCCGGGCCACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: PLGPGHLHADLMLLLREPGEAAP*PGPPAC
Trigger: GCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCC...CGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366911.9
ENST00000436279.1
CDS-3UTR TCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGTGGCTGGAGAGGTCGTaGCTTCCGCCGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAWLERS*LPPCPA
Trigger: TGCTGGGCACGGCGGAAGTCACGACCTCTCCAGCCA...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCGCCGCTTCTGCCCCGTaGCAAGGCGTGACTAGGACC +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSAASAP*QGVTRT
Trigger: GGTCCTAGTCACGCCTTGGCACGGGGCAGAAGCGGC...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCGGCGAGGCAGCCCCTTaGCCCGGGCCACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPGEAAP*PGPPAC
Trigger: GCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCC...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACAGGCGCGCGGGTCCGTaGAGATGGTGCATTCCGTGC +
Preference number: 4 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYRRAGP*RWCIPC
Trigger: GCACGGAATGCACCATCTTCACGGACCCGCGCGCCT...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR TCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAGCAACAGGTGATGCTTaGGGCGAGGCAGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLATGDA*GEAAPW
Trigger: CCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGC...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGACTCCCCATCCGGCCTTaGGACCAGACTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRLPIRP*DQTPWL
Trigger: CAGCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAG...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGCTCCCCATCCGGCCTTaGGACCAGACTCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLSQMLTGSWTCVSCQELLPIRP*DQTPWL
Trigger: CAGCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAG...CAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACTCCTGCCAGGAGCTGTaGTGGCCTGCCCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYSCQEL*WPAHPS
Trigger: AGAGGGGTGGGCAGGCCAGCACAGCTCCTGGCAGGA...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CAACAGGTGATGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCCACCTGCATGCTAGCGAAACTCTCCCTTaGTGTGTGCCAGGGACACGC +
Preference number: 4 (lower is better)
Translates to: QQVMLEARQPLGPGHLHASETLP*CVPGTR
Trigger: GCGTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCT...AGCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGGCACAGCTGAGGCCATaGCATTGCTACCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAAQLRP*HCYPEA
Trigger: AGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGC...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGCGTCACGTCTGGGGATaGCCCTGCACTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LLSQMLTGSWTCVSCQELRHVWG*PCTALQ
Trigger: CTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACG...CAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGGGCAGGGCAGGGCTGTaGGCTCAGGAGCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRGRAGL*AQEPIP
Trigger: AGGGATGGGCTCCTGAGCTCACAGCCCTGCCCTGCC...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCCCATCAAGCCTGCCTaGAGGGCCGCCAGCGAGTTA +
Preference number: 4 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHPIKPA*RAASEL
Trigger: TAACTCGCTGGCGGCCCTGCAGGCAGGCTTGATGGG...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGACAGGGTGGGCAGATGTaGTGGGCGCTCCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRQGGQM*WALPSS
Trigger: GCTTGATGGGAGCGCCCAGCACATCTGCCCACCCTG...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTATGGTGCACCTGCAGATaGCGCACTCAGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLWCTCR*RTQQPG
Trigger: TCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCA...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCATGCTCACGGGCTCCTaGACCTGTGTCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSMLTGS*TCVSCQ
Trigger: CTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCAT...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTTGGTTCGTGGCAACAGGTGATGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCGTCTGCAAAGGCCGCTaGAGATGCTACAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LGSWQQVMLEARQPLGPGVCKGR*RCYRAE
Trigger: TTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC...GCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAACCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCATGCCCTGTGCAGGGTaGGCAGATGTGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: CQGHASLVSTHVLAISALMPCAG*ADVLGA
Trigger: AGCGCCCAGCACATCTGCCCACCCTGCACAGGGCAT...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCCACCGTGGAGCAATGTaGTGCACCTGCAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSHRGAM*CTCRCR
Trigger: GCGGCATCTGCAGGTGCACCACATTGCTCCACGGTG...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGTTTCCTTCCCATACTTaGGGTAGGCGCGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LLSQMLTGSWTCVSCQELFPSHT*GRRAGP
Trigger: CGGACCCGCGCGCCTACCTCAAGTATGGGAAGGAAA...CAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR TCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGTGGCTGGAGAGGTCGTaGCTTCCGCCGTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRWLERS*LPPCPA
Trigger: TGCTGGGCACGGCGGAAGTCACGACCTCTCCAGCCA...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGCAGGGCAGGGCTGTaGGCTCAGGAGCCCATCCCT +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLGRAGL*AQEPIP
Trigger: AGGGATGGGCTCCTGAGCTCACAGCCCTGCCCTGCC...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCAGATGGTGCATTCCGTaGCCGACCACCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GPGHLHADLMLLLREPCARWCIP*PTTTPA
Trigger: TGCTGGAGTGGTGGTCGGGCACGGAATGCACCATCT...GGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGCAATGTGGTGCACCTaGAGATGCCGCACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LALSSTCQHSSAASAPCQAMWCT*RCRTQQ
Trigger: CTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGC...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCGCAATGTGGTGCACCTaGAGATGCCGCACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: GPGHLHADLMLLLREPCAAMWCT*RCRTQQ
Trigger: CTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGC...GGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAAGGCGAGGCAGCCCCTTaGCCCGGGCCACCTGCATGC +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKGEAAP*PGPPAC
Trigger: GCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCC...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAACAGGTGATGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCCACCTGCATGCTGGGATTTTCAGCAGCTaGCTTGAAGCCCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: QQVMLEARQPLGPGHLHAGIFSS*LEAPEW
Trigger: CCATTCAGGGGCTTCAAGCCAGCTGCTGAAAATCCC...AGCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR CAA 72 bp GCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTaGCCATCTCTGCTCTCACAAATGCTCACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: ARDTLRWSPRTC*PSLLSQMLTGS
Trigger: GGAGCCCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTTGGTTCGTGGCAACAGGTGATGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCCGTGGACAGGTCAAATaGCTGATGAGAAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LGSWQQVMLEARQPLGPGRGQVK*LMRKRS
Trigger: GGACCTCTTTCTCATCAGTCATTTGACCTGTCCACG...GCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACCCCCGTGCCAAGGCGTaGCTAGGACCAGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYPRAKA*LGPEES
Trigger: TGATTCTTCTGGTCCTAGTCACGCCTTGGCACGGGG...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATTGGTGGCAACCGTCTTaGGATCCTGCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDWWQPS*DPAPTC
Trigger: GCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCA...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAACTCTGCTCTCACAAATaGTCACGGGCTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: LALSSTCQHSSAASAPCQLCSHK*SRAPGP
Trigger: AGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAGAG...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGCTTACGCCAGGAGACTaGACTGCAGAGACCGAGCGA +
Preference number: 4 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRLTPGD*TAETER
Trigger: TCGCTCGGTCTCTGCAGTGCAGTCTCCTGGCGTAAG...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCCACGTCCTGGGCTTTTaGCCACAGATCTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSHVLGF*PQISAH
Trigger: GTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTG...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGAGGAGCCCATCCCTGTaGTCAGAGAGATGGGACTCC +
Preference number: 4 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRRSPSL*SERWDS
Trigger: GGAGTCCCATCTCTCTGAGCACAGGGATGGGCTCCT...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCACCATGGGCGTCTCTaGGAAGGTGCCCGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNHHGRL*EGARPV
Trigger: TACAGGACGGGCACCTTCCCAGAGACGCCCATGGTG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTTGGTTCGTGGCAACAGGTGATGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCACAAGCTCTACATGCTaGGAAGGGGCGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LGSWQQVMLEARQPLGPGTSSTC*EGARHF
Trigger: AAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGT...GCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGCCAGGCCGAGCACTCGTCATCGTCTTCAGGGATGTCTTCCAGTGGGATCCTCCGCACTCAGCAGCCTaGAATGCCAGCTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: QPGRALVIVFRDVFQWDPPHSAA*NASSHA
Trigger: GGCATGAGAGCTGGCATTCCAGGCTGCTGAGTGCGG...AGGATCCCACTGGAAGACATCCCTGAAGACGATGACGAGTGCTCGGCCTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCCACCGTGGAGCAATGTaGTGCACCTGCAGATGCCGC +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLHRGAM*CTCRCR
Trigger: GCGGCATCTGCAGGTGCACCACATTGCTCCACGGTG...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCTACGGGCTCCGGTTTTaGAGTGCAGAGGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSYGLRF*SAEGLA
Trigger: TGCCAATCCCTCTGCACTCCAAAACCGGAGCCCGTA...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGCTGTGCTCAGAGAGATaGGACTCCAATGAGGAGACA +
Preference number: 4 (lower is better)
Translates to: LSAAPVSIARPLLPRAKALCSER*DSNEET
Trigger: TGTCTCCTCATTGGAGTCCCATCTCTCTGAGCACAG...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGTTGCTACCCGGAAGCTaGCTCTGCAGCGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: LQESPRIWPVTSGDDPALLLPGS*LCSVVT
Trigger: AGTCACAACGCTGCAGAGCCAGCTTCCGGGTAGCAA...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp CCCTCACCTAGAAACGCCTTCTCGGCTGAATGGCTGTaGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: PSPRNAFSAEWL*ALSSTCQHSSA
Trigger: GGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCGAGAAGGCGTTTCTAGGTGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAATTAGAAACCAGAAGCTaGGATGGAGCCGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LALSSTCQHSSAASAPCQLETRS*DGAGWV
Trigger: AACCCAGCCGGCTCCATCTCAGCTTCTGGTTTCTAA...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TGCTCCCACTTGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCAGCCGAGGTGGCACAGGAACTaGGACTTCAGCAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: CSHLREQKTISVKYHIQPRWHRN*DFSSPA
Trigger: CGCGGGACTGCTGAAGTCTCAGTTCCTGTGCCACCT...CGGCTGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAAGGACAGTCTGCAGTTaGTCTTCCGGAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LALSSTCQHSSAASAPCQRTVCS*SSGRAA
Trigger: AGCAGCTCTTCCGGAAGATCAACTGCAGACTGTCCT...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAAGAAGACCATCTCGGTaGAGTACCACATCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLRRPSR*STTSSR
Trigger: TCGGCTGGATGTGGTACTTCACCGAGATGGTCTTCT...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCCATGCTTCTTCTCCGTaGACCGTGTGCCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: CQGHASLVSTHVLAISALHASSP*TVCPHS
Trigger: ACTGTGAGGGCACACGGTTCACGGAGAAGAAGCATG...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGACATGCTTCTTCTCCGTaGACCGTGTGCCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRHASSP*TVCPHS
Trigger: ACTGTGAGGGCACACGGTTCACGGAGAAGAAGCATG...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CAGCCAGGCCGAGCACTCGTCATCGTCTTCAGGGATGTCTTCCAGTGGGATCCTTCAAGCTCCTCACGGTaGTGGCGAAGCCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: QPGRALVIVFRDVFQWDPSSSSR*WRSPWF
Trigger: GAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGA...AGGATCCCACTGGAAGACATCCCTGAAGACGATGACGAGTGCTCGGCCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp CAGCCAGGCCGAGCACTCGTCATCGTCTTCAGGGATGTCTTCCAGTGGGATCCTCCCGTGAGTAGGATCTaGAACACCAAAGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: QPGRALVIVFRDVFQWDPPVSRI*NTKATG
Trigger: GCCCGTGGCTTTGGTGTTTCAGATCCTACTCACGGG...AGGATCCCACTGGAAGACATCCCTGAAGACGATGACGAGTGCTCGGCCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCATGGGATGTCGGCTCTaGTTTGACCCTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSMGCRL*FDPHQS
Trigger: GCTCTGATGAGGGTCAAATCAGAGCCGACATCCCAT...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CCCTTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCAATGGGATGTCGGCTCTaGTTTGACCCTCATCAGAGC +
Preference number: 4 (lower is better)
Translates to: PLLCARDTLRWSPRTCLPMGCRL*FDPHQS
Trigger: GCTCTGATGAGGGTCAAATCAGAGCCGACATCCCAT...TGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCGATGCTGGTCTCTTCTaGACACACCGTGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: GPGHLHADLMLLLREPCADAGLF*THRGAM
Trigger: CATTGCTCCACGGTGTGTTCAGAAGAGACCAGCATC...GGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp GGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCGATCCTGCTCCCACTTaGGCGAACAGAAGACCATCT +
Preference number: 4 (lower is better)
Translates to: GPGHLHADLMLLLREPCADPAPT*ANRRPS
Trigger: AGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATC...GGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366911.9
ENST00000436279.1
CDS-3UTR GCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCACCGTCTTGCGATCCTaGTCCCACTTGCGCGAACAG +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLTVLRS*SHLREQ
Trigger: CTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGT...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGACCGTCTTGCGATCCTaGTCCCACTTGCGCGAACAG +
Preference number: 4 (lower is better)
Translates to: VATVLRSCSHLREQKTISTVLRS*SHLREQ
Trigger: CTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGT...CGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCATTGGCCCGGGCCACCTaGATGCTGATCTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWALARAT*MLISCF
Trigger: GAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAA...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATTTGGCCCGGGCCACCTaGATGCTGATCTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNLARAT*MLISCF
Trigger: GAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAA...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATGCTTGCTGTCAGAGTTaGCGTAGGCAGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDACCQS*RRQSPC
Trigger: ACAAGGGCTCTGCCTACGGCAACTCTGACAGCAAGC...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCAGCCCTGCCCTCCCCTaGAGCCTAAAATACCCTTTC +
Preference number: 4 (lower is better)
Translates to: CQGHASLVSTHVLAISALSPALP*SLKYPF
Trigger: GAAAGGGTATTTTAGGCTGCAGGGGAGGGCAGGGCT...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGTCCTGCCAGGAGCTGTaGTGGCCTGCCCACCCCTCT +
Preference number: 4 (lower is better)
Translates to: YISQAPHGDGEALGSWQQSCQEL*WPAHPS
Trigger: AGAGGGGTGGGCAGGCCAGCACAGCTCCTGGCAGGA...CTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGATGGTCTCCACGCACGTaGTTGCCATCTCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRWSPRT*LPSLLS
Trigger: TGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCA...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCTCTCCCTTGCTGTGTaGCAGGGACACGCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNLSLAV*QGHASL
Trigger: CAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGCAGACAAGCTCTACATaGTGGGAAGGGGCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLSQMLTGSWTCVSCQELQTSST*WEGARH
Trigger: ATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTG...CAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACCAGTTCCCCAAGGTTCCCTTCGGATGGTGACACCTCCCTGAGTCAGTCATTCGCACACGGTGCTTCATaGCCTGTGCAGGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: TSSPRFPSDGDTSLSQSFAHGAS*PVQGGQ
Trigger: CTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGC...GAATGACTGACTCAGGGAGGTGTCACCATCCGAAGGGAACCTTGGGGAACTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCACTCAGCAGCCTGGAATaGCAGCTCTCATGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWALSSLE*QLSCPH
Trigger: GTGAGGGCATGAGAGCTGGCATTCCAGGCTGCTGAG...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGAGGAGGTGCTGCAAACTaGTGGCAACCGTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRGGAAN*WQPSCD
Trigger: ATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCC...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGACCAGACTCCCTGGCTaGAGAGGTCGTGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRTRLPG*RGRDFR
Trigger: GCGGAAGTCACGACCTCTCCAGCCAGGGAGTCTGGT...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATTTCCGTGGAGTAAAATaGGAGCAGACAGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDFRGVK*EQTGAR
Trigger: CCGGGCTCCTGTCTGCTCCCATTTTACTCCACGGAA...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCACCCCTCCGAGAGACTaGCCCGATAATCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPTPPRD*PDNPGA
Trigger: TGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGT...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCGAGTCGCCTAGGATATaGCCCGTCACGTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLESPRI*PVTSGD
Trigger: ATCCCCAGACGTGACGGGCCATATCCTAGGCGACTC...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCCATTCTGTTTTGCTTaGGGACCAGCCAGACCACTC +
Preference number: 4 (lower is better)
Translates to: GPGHLHADLMLLLREPCAPFCFA*GPARPL
Trigger: GAGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGG...GGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGACGTGAGACACAGGTGTaGTGGAGGCATTATGAGGGG +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRRETQV*WRHYEG
Trigger: CCCCTCATAATGCCTCCACCACACCTGTGTCTCACG...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGATTGCTACCCGGAAGCTaGCTCTGCAGCGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRLLPGS*LCSVVT
Trigger: AGTCACAACGCTGCAGAGCCAGCTTCCGGGTAGCAA...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCGTCCCGCGAGGTCCATaGTGCGTGGACGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPVPRGP*CVDALI
Trigger: AATAAGAGCGTCCACGCATCATGGACCTCGCGGGAC...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGTTCGTGGCAACAGGTaGTGCTTGAGGCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLVRGNR*CLRRGS
Trigger: GCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAAC...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCACATCAAGCTCCTCACGGTaGTGGCGAAGCCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GHLHADLMLLLREPCALTSSSSR*WRSPWF
Trigger: GAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGA...TGTGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGGTTCCCTTCGGATGGTaGCACCTCCCTGAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRVPFGW*HLPESV
Trigger: GACTGACTCAGGGAGGTGTCACCATCCGAAGGGAAC...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGTGCTTGTGTGTTGTGTaGTACCAGAGCCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: LSAAPVSIARPLLPRAKACLCVV*YQSQFR
Trigger: TCTGAATTGGCTCTGGTATCACACAACACACAAGCA...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCTCAGTTAAGGCATCGTaGGACACAGGTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: CQGHASLVSTHVLAISALSVKAS*DTGVVE
Trigger: CTCCACCACACCTGTGTCTCACGATGCCTTAACTGA...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGAATGAGCCCAGAGCCTaGGATTCAAGATGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: LQESPRIWPVTSGDDPALNEPRA*DSRCWS
Trigger: AGACCAGCATCTTGAATCTCAGGCTCTGGGCTCATT...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGAGCACCCTTCTGAGATaGAACCAATTTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LSAAPVSIARPLLPRAKASTLLR*NQFLVH
Trigger: GTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCT...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACAGGAGGCAGGGATGCTaGGGATGTGAATTAGAGTGC +
Preference number: 4 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHRRQGC*GCELEC
Trigger: GCACTCTAATTCACATCCTCAGCATCCCTGCCTCCT...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCACATTGGCCCGGGCCACCTaGATGCTGATCTCATGCTTC +
Preference number: 4 (lower is better)
Translates to: GHLHADLMLLLREPCALTLARAT*MLISCF
Trigger: GAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAA...TGTGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCCACTAAGGAGGATATaGAGAGGCCACCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNPLRRI*RGHQFP
Trigger: GGGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAACCTATCGGTCCAAGTaGCATTGGTGTCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLTYRSK*HWCLGL
Trigger: TAGGCCAAGACACCAATGGCACTTGGACCGATAGGT...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCCACGTCCTGGGCTTTTaGCCACAGATCTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLHVLGF*PQISAH
Trigger: GTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTG...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCGCCGCTTCTGCCCCGTaGCAAGGCGTGACTAGGACC +
Preference number: 4 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGAASAP*QGVTRT
Trigger: GGTCCTAGTCACGCCTTGGCACGGGGCAGAAGCGGC...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACGAATGCCAGCTCTCATaGCCTCACCTAGAAACGCCT +
Preference number: 4 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYECQLS*PHLETP
Trigger: AGGCGTTTCTAGGTGAGGGCATGAGAGCTGGCATTC...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGGCACAGCTGAGGCCATaGCATTGCTACCCGGAAGCT +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWAQLRP*HCYPEA
Trigger: AGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGC...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATGGAGCCGGCTTGAGATaGAATAGGACAGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDGAGLR*NRTVCS
Trigger: ACTGCAGACTGTCCTATTGCATCTCAAGCCGGCTCC...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGAACCAGAAGCTGAGATaGAGCCGGCTGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRNQKLR*SRLGSE
Trigger: TTCTGAACCCAGCCGGCTCCATCTCAGCTTCTGGTT...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGGGTGCTGCAAACTGGTaGCAACCGTCTTGCGATCCT +
Preference number: 4 (lower is better)
Translates to: VATVLRSCSHLREQKTISGAANW*QPSCDP
Trigger: AGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACC...CGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATGTCTGCAAAGGCCGCTaGAGATGCTACAGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNVCKGR*RCYRAE
Trigger: TTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCGGGATTTTCAGCAGCTaGCTTGAAGCCCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: CQGHASLVSTHVLAISALGIFSS*LEAPEW
Trigger: CCATTCAGGGGCTTCAAGCCAGCTGCTGAAAATCCC...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCGTGATGACTGGAACCTaGGCCTTCATTACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLVMTGT*AFITGS
Trigger: GGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCAC...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAGGATCCTGTGATGACTaGAACCTGGGCCTTCATTAC +
Preference number: 4 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLGSCDD*NLGLHY
Trigger: GTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCC...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp AAACTCTCCCTTGCTGTGTGCCAGGGACACGCTTCGTaGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: KLSLAVCQGHAS*VSTHVLAISAL
Trigger: GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp AAGGACCCCTCTTGCCTAAGGTCACGTCCTGGGCTTTaGCCCACAGATCTCTGCACACGGTGCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: KDPSCLRSRPGL*PTDLCTRCFMP
Trigger: GGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGGGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp TCCAGTTGTAGCCTTGGCACAGCTGAGGCCATGCCATaGCTACCCGGAAGCTGGCTCTGCAGCGTTGTGACT +
Preference number: 4 (lower is better)
Translates to: SSCSLGTAEAMP*LPGSWLCSVVT
Trigger: AGTCACAACGCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCTACAACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TATTTCTACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGAGGCGCGCGGGTCCGTaGAGATGGTGCATTCCGTGC +
Preference number: 4 (lower is better)
Translates to: YFYISQAPHGDGEALGSWRRAGP*RWCIPC
Trigger: GCACGGAATGCACCATCTTCACGGACCCGCGCGCCT...CCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTAGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp GTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGAGAAGACCATCTCGGTaGAGTACCACATCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: VATVLRSCSHLREQKTISRRPSR*STTSSR
Trigger: TCGGCTGGATGTGGTACTTCACCGAGATGGTCTTCT...CGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp TTGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCAGCCGATAATTGGGGCAACAGGTGATGCTTaGGGCGAGGCAGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LREQKTISVKYHIQPIIGATGDA*GEAAPW
Trigger: CCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGC...CCCAATTATCGGCTGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCACTCAGCACCAAAGGATaGAAGGGGAACTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWALSTKG*KGNLSP
Trigger: AGGGGACAAGTTCCCCTTTCATCCTTTGGTGCTGAG...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAAATTCAGAAGAAAATTaGATGTCTGTGGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLNSEEN*MSVGPR
Trigger: CCGGGGGCCCACAGACATTCAATTTTCTTCTGAATT...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATCGTGGACAGGTCAAATaGCTGATGAGAAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDRGQVK*LMRKRS
Trigger: GGACCTCTTTCTCATCAGTCATTTGACCTGTCCACG...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGGACCTCCGTGTGACCTaGACATGGGTGAAGGTATTT +
Preference number: 4 (lower is better)
Translates to: LLSQMLTGSWTCVSCQELDLRVT*TWVKVF
Trigger: AAATACCTTCACCCATGTTCAGGTCACACGGAGGTC...CAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGGGCTCTGCAGCGTTGTaGCTTAGACACTTTACAAGT +
Preference number: 4 (lower is better)
Translates to: LQESPRIWPVTSGDDPALGSAAL*LRHFTS
Trigger: ACTTGTAAAGTGTCTAAGTCACAACGCTGCAGAGCC...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCTACCCTAGGGTGACATaGCAGCCCATATATCAGTTC +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSYPRVT*QPIYQF
Trigger: GAACTGATATATGGGCTGTCATGTCACCCTAGGGTA...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCACCTTGGAGCCGGCTTaGGATGCAATAGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLTLEPA*DAIGQS
Trigger: AGACTGTCCTATTGCATCTCAAGCCGGCTCCAAGGT...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCTCTGCTCTCACAAATaGTCACGGGCTCCTGGACCT +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRLCSHK*SRAPGP
Trigger: AGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAGAG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACAAAGGCCGCTGGAGATaGTACAGGGCAGAACTATTC +
Preference number: 4 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYKGRWR*YRAELF
Trigger: GAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTT...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACACCTATCGGTCCAAGTaGCATTGGTGTCTTGGCCTA +
Preference number: 4 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHTYRSK*HWCLGL
Trigger: TAGGCCAAGACACCAATGGCACTTGGACCGATAGGT...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCTCAGGCCCTAGGCTCTaGAGTACGCTCTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPSGPRL*STLFPQ
Trigger: TTGTGGGAAGAGCGTACTGCAGAGCCTAGGGCCTGA...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGTCAGGCCCTAGGCTCTaGAGTACGCTCTTCCCACAA +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRSGPRL*STLFPQ
Trigger: TTGTGGGAAGAGCGTACTGCAGAGCCTAGGGCCTGA...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAACCCATCAAGCCTGCCTaGAGGGCCGCCAGCGAGTTA +
Preference number: 4 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKPIKPA*RAASEL
Trigger: TAACTCGCTGGCGGCCCTGCAGGCAGGCTTGATGGG...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCATCCAAGGACCCCTCTTaGCTAAGGTCACGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPSKDPS*LRSRPG
Trigger: CCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGA...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCTTCCTAAGAGATTTCTaGCTGCATTCCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSFLRDF*LHSSSL
Trigger: CAGGCTGGAGGAATGCAGGCAGAAATCTCTTAGGAA...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGGCTCAGCAGCCTGGAATaGCAGCTCTCATGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TFLKLLTVMAKPLVRGNRLSSLE*QLSCPH
Trigger: GTGAGGGCATGAGAGCTGGCATTCCAGGCTGCTGAG...CCTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACGCTCCGGTTTTGGAGTaGAGAGGGATTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHAPVLE*RGIGIC
Trigger: ACAAATGCCAATCCCTCTGCACTCCAAAACCGGAGC...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CCCCTTGGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGCAGTCCAGTAAGCTGTaGTGTCTAGTGGTATCCACA +
Preference number: 4 (lower is better)
Translates to: PLGPGHLHADLMLLLREPQSSKL*CLVVST
Trigger: TGTGGATACCACTAGACAGCACAGCTTACTGGACTG...CGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAAATGCCCTGTGCAGGGTaGGCAGATGTGCTGGGCGCT +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKMPCAG*ADVLGA
Trigger: AGCGCCCAGCACATCTGCCCACCCTGCACAGGGCAT...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACCCCCCATTTTGCAGATaGGGAAATGAGTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYPPFCR*GNESAR
Trigger: CCTTGCTGACTCATTTCCCCATCTGCAAAATGGGGG...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGTACTCCACAGGACCTTaGAGAGTTGCATTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKYSTGP*RVAFWG
Trigger: CCCCCAAAATGCAACTCTCCAAGGTCCTGTGGAGTA...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGAGGATCCTGTGATGACTaGAACCTGGGCCTTCATTAC +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRGSCDD*NLGLHY
Trigger: GTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCC...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGGAAGGAAGGCCTGGGTaGGAACCTGGATGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWEGRPG*EPGCPF
Trigger: GAAAGGACATCCAGGTTCCCACCCAGGCCTTCCTTC...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCGAAGGAAGGCCTGGGTaGGAACCTGGATGTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPEGRPG*EPGCPF
Trigger: GAAAGGACATCCAGGTTCCCACCCAGGCCTTCCTTC...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp ACACCATGCACACCTCCACTTCTCCAAGGACCCCTCTaGCCTAAGGTCACGTCCTGGGCTTTTGCCCACAGA +
Preference number: 4 (lower is better)
Translates to: TPCTPPLLQGPL*PKVTSWAFAHR
Trigger: TCTGTGGGCAAAAGCCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAGAAGTGGAGGTGTGCATGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp GCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTaGGCACAGCTGAGGCCATGCCATTGCTACCCGGAA +
Preference number: 4 (lower is better)
Translates to: ASDASKEAPVVA*AQLRPCHCYPE
Trigger: TTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCACAGTGAATTTTCCTTCCCATACTTaGGGTAGGCGCGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: LHADLMLLLREPCALTVNFPSHT*GRRAGP
Trigger: CGGACCCGCGCGCCTACCTCAAGTATGGGAAGGAAA...ATTCACTGTGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGGCAACAGGTGATGCTTaGGGCGAGGCAGCCCCTTGG +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKATGDA*GEAAPW
Trigger: CCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTGC...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATTTTGGCTGTCACTGCTaGGAGGAACAGTCGATGCAA +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNFGCHC*EEQSMQ
Trigger: TTGCATCGACTGTTCCTCTCAGCAGTGACAGCCAAA...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGGGTGGTGGAGGCATTATaGGGGGACTACTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: TFLKLLTVMAKPLVRGNRVVEAL*GDYSTG
Trigger: TCCTGTGGAGTAGTCCCCTCATAATGCCTCCACCAC...CCTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGTCAGTTAAGGCATCGTaGGACACAGGTGTGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWSVKAS*DTGVVE
Trigger: CTCCACCACACCTGTGTCTCACGATGCCTTAACTGA...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCAGGAGGCAGGGATGCTaGGGATGTGAATTAGAGTGC +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPRRQGC*GCELEC
Trigger: GCACTCTAATTCACATCCTCAGCATCCCTGCCTCCT...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGATACCCTAGGGTGACATaGCAGCCCATATATCAGTTC +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRYPRVT*QPIYQF
Trigger: GAACTGATATATGGGCTGTCATGTCACCCTAGGGTA...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCGACAGTACCCTAGGGTaGCATGACAGCCCATATATC +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLDSTLG*HDSPYI
Trigger: GATATATGGGCTGTCATGTCACCCTAGGGTACTGTC...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGAAAGATTGCTACACATaGCAGAGCGACAGTACCCTA +
Preference number: 4 (lower is better)
Translates to: LQESPRIWPVTSGDDPALKDCYT*QSDSTL
Trigger: TAGGGTACTGTCGCTCTGTCATGTGTAGCAATCTTT...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCATCTTCCGGAAGAGCTaGTTGTTAATGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLIFRKS*LLMGQR
Trigger: CCTCTGGCCCATTAACAAGCAGCTCTTCCGGAAGAT...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCATGGTGGCAACCGTCTTaGGATCCTGCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: ILLPLARTEDHLGEVPHPWWQPS*DPAPTC
Trigger: GCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCA...TGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp AGTCCCGGAGGTGCTGCAAACTGGTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCATGCTGATCTCATaGTTCTTCTCCGTGAACCGT +
Preference number: 4 (lower is better)
Translates to: SPGGAANWWQPSCDPAPTCMLIS*FFSVNR
Trigger: ACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCA...AGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp ACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGGGCTTGCTGTCAGAGTTaGCGTAGGCAGAGCCCTTGT +
Preference number: 4 (lower is better)
Translates to: TFLKLLTVMAKPLVRGNRACCQS*RRQSPC
Trigger: ACAAGGGCTCTGCCTACGGCAACTCTGACAGCAAGC...CCTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCAGTCATTCAGTTTCTaGTTGCTGTCAGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHQSFSF*LLSELP
Trigger: CGGCAACTCTGACAGCAAGCAGAAACTGAATGACTG...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGCAGTCATTCAGTTTCTaGTTGCTGTCAGAGTTGCCG +
Preference number: 4 (lower is better)
Translates to: LLSQMLTGSWTCVSCQELQSFSF*LLSELP
Trigger: CGGCAACTCTGACAGCAAGCAGAAACTGAATGACTG...CAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCGAGAGGAACAGTCGATaGAAGCTCATCTCACAAATC +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSERNSR*KLISQI
Trigger: GATTTGTGAGATGAGCTTGCATCGACTGTTCCTCTC...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCACAGACAAGCTCTACATaGTGGGAAGGGGCGAGGCAT +
Preference number: 4 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPQTSST*WEGARH
Trigger: ATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTG...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGTTCCTAAGAGATTTCTaGCTGCATTCCTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLSQMLTGSWTCVSCQELFLRDF*LHSSSL
Trigger: CAGGCTGGAGGAATGCAGGCAGAAATCTCTTAGGAA...CAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCCTGCTTCTATAAGCTaGAGGAGTCGCCTAGGATAT +
Preference number: 4 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKPASIS*RSRLGY
Trigger: ATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGG...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCAAGCCCATTCTGTTTTaGTTGGGGACCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPKPILF*LGTSQT
Trigger: GGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTT...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGTCCTTCCTCATGATCTaGAAAGATACAGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: LSAAPVSIARPLLPRAKASFLMI*KDTERM
Trigger: CATTCTCTCTGTATCTTTGCAGATCATGAGGAAGGA...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGCTGAGGCCATGCCATTaGTACCCGGAAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: EKEVQISPQHATFSFGSKLRPCH*YPEAGS
Trigger: AGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAG...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTGGCCTGGGCCAGCCTTaGTGTGTTTGCCTCAGATGC +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTGLGQP*CVCLRC
Trigger: GCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCC...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGGGCCTGGGCCAGCCTTaGTGTGTTTGCCTCAGATGC +
Preference number: 4 (lower is better)
Translates to: SLAVFASDASKEAPVVALGLGQP*CVCLRC
Trigger: GCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCC...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCATCAACCGCTACACGCTaGAGTGTGTTGAAGACGACA +
Preference number: 4 (lower is better)
Translates to: RATCMLISCFFSVNRVPSSTATR*SVLKTT
Trigger: TGTCGTCTTCAACACACTGCAGCGTGTAGCGGTTGA...TGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGACATCCAGCCGATAATTaGGACATAGGCCAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRHPADN*DIGQLF
Trigger: AAAGAGCTGGCCTATGTCCCAATTATCGGCTGGATG...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCAGGTGCTGCAAACTGGTaGCAACCGTCTTGCGATCCT +
Preference number: 4 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPGAANW*QPSCDP
Trigger: AGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACC...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAATTTTTGGCACCTGTTaGCTGACAGCAGTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LALSSTCQHSSAASAPCQIFGTC*LTAVCK
Trigger: TTTGCAGACTGCTGTCAGCCAACAGGTGCCAAAAAT...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCCATTCTGTTTTGCTTaGGGACCAGCCAGACCACTC +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRPFCFA*GPARPL
Trigger: GAGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATTGGAGAGTTGCATTTTaGGGGGCTCTCCTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNWRVAF*GALLEA
Trigger: AGCTTCTAGGAGAGCCCCCCAAAATGCAACTCTCCA...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCATACTCCACAGGACCTTaGAGAGTTGCATTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWAYSTGP*RVAFWG
Trigger: CCCCCAAAATGCAACTCTCCAAGGTCCTGTGGAGTA...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCACGTGAGACACAGGTGTaGTGGAGGCATTATGAGGGG +
Preference number: 4 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPRETQV*WRHYEG
Trigger: CCCCTCATAATGCCTCCACCACACCTGTGTCTCACG...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCAGGAGTCCGAAAGCATTaGCAAAGCCAGCACATCTGT +
Preference number: 4 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWAGVRKH*QSQHIC
Trigger: ACAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCC...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCCTTGAAGCCCCTGAATaGTCCCTTGGCAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPLEAPE*SLGRGK
Trigger: TTTGCCTCTGCCAAGGGACCATTCAGGGGCTTCAAG...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp AAACTGGTGGCAACCGTCTTGCGATCCTGCTCCCACTaGCGCGAACAGAAGACCATCTCGGTGAAGTACCAC +
Preference number: 4 (lower is better)
Translates to: KLVATVLRSCSH*REQKTISVKYH
Trigger: GTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACAGGAGAGTGAAGAGCTaGATGGTGTTGATGATTAGC +
Preference number: 4 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHRRVKS*MVLMIS
Trigger: GCTAATCATCAACACCATTCAGCTCTTCACTCTCCT...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGTCCCGGAGGTGCTGCAAACTGGTGGCAACCGTCTTGCGATCCTGCTCCCACTAGGAGAGTGAAGAGCTaGATGGTGTTGATGATTAGC +
Preference number: 4 (lower is better)
Translates to: SPGGAANWWQPSCDPAPTRRVKS*MVLMIS
Trigger: GCTAATCATCAACACCATTCAGCTCTTCACTCTCCT...AGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp TATTTCTACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGGTTCGTGGCAACAGGTaGTGCTTGAGGCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: YFYISQAPHGDGEALGSWVRGNR*CLRRGS
Trigger: GCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAAC...CCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTAGAAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTGTTCCCTTCGGATGGTaGCACCTCCCTGAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTVPFGW*HLPESV
Trigger: GACTGACTCAGGGAGGTGTCACCATCCGAAGGGAAC...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATAATTCAGAAGAAAATTaGATGTCTGTGGGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNNSEEN*MSVGPR
Trigger: CCGGGGGCCCACAGACATTCAATTTTCTTCTGAATT...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGGGCAGAGGCAAAGAATaGGCCCAGAGCCTGAGATTC +
Preference number: 4 (lower is better)
Translates to: EKEVQISPQHATFSFGSKGRGKE*AQSLRF
Trigger: GAATCTCAGGCTCTGGGCTCATTCTTTGCCTCTGCC...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCAGCACCCTTCTGAGATaGAACCAATTTCTTGTCCAC +
Preference number: 4 (lower is better)
Translates to: CQGHASLVSTHVLAISALSTLLR*NQFLVH
Trigger: GTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCT...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACAGGGAAGCACCCTTCTaGGATGAAACCAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYREAPF*DETNFL
Trigger: CAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCCT...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGAAGCAGAAGCTAATTaGAATTCCATTACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LALSSTCQHSSAASAPCQEAEAN*NSITQA
Trigger: GGCCTGAGTAATGGAATTTCAATTAGCTTCTGCTTC...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGAAAGATTGCTACACATaGCAGAGCGACAGTACCCTA +
Preference number: 4 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRKDCYT*QSDSTL
Trigger: TAGGGTACTGTCGCTCTGTCATGTGTAGCAATCTTT...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGGTCACGCTGCAGTGTGTTaGAGACGACAAAAGTCAACT +
Preference number: 4 (lower is better)
Translates to: GNRLAILLPLARTEDHLGHAAVC*RRQKST
Trigger: AGTTGACTTTTGTCGTCTTCAACACACTGCAGCGTG...ACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAATGGTGGCAACCGTCTTaGGATCCTGCTCCCACTTGC +
Preference number: 4 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKWWQPS*DPAPTC
Trigger: GCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCA...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCATTCAGTTTCTGCTTaGTGTCAGAGTTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNHSVSA*CQSCRR
Trigger: CCTACGGCAACTCTGACAGCAAGCAGAAACTGAATG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTCCCACCCCTCTCAGCTaGCCACACCTCCGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAPTPLS*PHLRGS
Trigger: GCTGCCGCGGAGGTGTGGGCAGCTGAGAGGGGTGGG...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGACCCACCCCTCTCAGCTaGCCACACCTCCGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRPTPLS*PHLRGS
Trigger: GCTGCCGCGGAGGTGTGGGCAGCTGAGAGGGGTGGG...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCACTCCACGCACGTGCTTaGCATCTCTGCTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPLHARA*HLCSHK
Trigger: TTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAG...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAACTCTCCCTTGCTGTGTaGCAGGGACACGCTTCGTTG +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKLSLAV*QGHASL
Trigger: CAACGAAGCGTGTCCCTGGCACACAGCAAGGGAGAG...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAAGCGAAACTCTCCCTTaGTGTGTGCCAGGGACACGC +
Preference number: 4 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKSETLP*CVPGTR
Trigger: GCGTGTCCCTGGCACACAGCAAGGGAGAGTTTCGCT...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAAAGGCCGCTGGAGATaGTACAGGGCAGAACTATTC +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWKGRWR*YRAELF
Trigger: GAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTT...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAATGGCTGACAGCAGTCTaGAAAGGCCGCTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKWLTAV*KGRWRC
Trigger: GCATCTCCAGCGGCCTTTGCAGACTGCTGTCAGCCA...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAATCCTTCCTAACTCATaGTCCAAATACCTATCGGTC +
Preference number: 4 (lower is better)
Translates to: LALSSTCQHSSAASAPCQILPNS*SKYLSV
Trigger: GACCGATAGGTATTTGGAGCATGAGTTAGGAAGGAT...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGTCCAAGGACCCCTCTTaGCTAAGGTCACGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLAVFASDASKEAPVVALSKDPS*LRSRPG
Trigger: CCCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGA...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGAGGATGTGAATTAGAGTaGTGGGATGTGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRGCELE*WDVLMP
Trigger: AGGCATTAGCACATCCCAGCACTCTAATTCACATCC...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTCTGAGGCCATGCCATTaGTACCCGGAAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTLRPCH*YPEAGS
Trigger: AGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAG...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TGCAAACTGGTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGGGCATGCAAGCTACGTaGAAGAGGTCAAACCCTAAC +
Preference number: 4 (lower is better)
Translates to: CKLVATVLRSCSHLREQKGMQAT*KRSNPN
Trigger: GTTAGGGTTTGACCTCTTGCACGTAGCTTGCATGCC...CTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGCTTCCTGGCAGCCTTTaGCACATGGACTTAGAAACC +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWLPGSL*HMDLET
Trigger: GGTTTCTAAGTCCATGTGCCAAAGGCTGCCAGGAAG...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCACATCCAGCCGATAATTaGGACATAGGCCAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RATCMLISCFFSVNRVPSHPADN*DIGQLF
Trigger: AAAGAGCTGGCCTATGTCCCAATTATCGGCTGGATG...TGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CCA 90 bp AAAATACTTCTCGGGGTAGTCCCGGAGGTGCTGCAAACTGGTGGCAACCGTCTTGGAGGTGCTGCAAACTaGTGGCAACCGTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: KILLGVVPEVLQTGGNRLGGAAN*WQPSCD
Trigger: ATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCC...AAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACTACCCCGAGAAGTATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTAGGGACACGCTTCGTTaGTCTCCACGCACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTRDTLR*SPRTCL
Trigger: CAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCT...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGACAAGCTCTACATGCTaGGAAGGGGCGAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRTSSTC*EGARHF
Trigger: AAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGT...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGAGGCAATTCAAAACTTaGCGCTCACTTAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: LSAAPVSIARPLLPRAKARQFKT*RSLSYF
Trigger: GAAATAACTAAGTGAGCGCCAAGTTTTGAATTGCCT...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCAGAGTCCCCGTGGGCTaGCTTTCCTGGAAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGRVPVG*LSWKKS
Trigger: GGACTTCTTCCAGGAAAGCCAGCCCACGGGGACTCT...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCATCGTGTTCACTATATaGTGGCAGAATCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: GPGHLHADLMLLLREPCAIVFTI*WQNQSS
Trigger: ACTGGACTGATTCTGCCACCATATAGTGAACACGAT...GGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp CCCTTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCAAGTATGTGGCAAGTCTaGACCACTGCTTTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLLCARDTLRWSPRTCLPSMWQV*TTALEK
Trigger: TTTCTCTAAAGCAGTGGTCCAGACTTGCCACATACT...TGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGAGACACAGGTGTGGTaGAGGCATTATGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLETQVW*RHYEGT
Trigger: AGTCCCCTCATAATGCCTCCACCACACCTGTGTCTC...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGCTTCTGAACACACCGTaGAGCAATGTGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLLLNTP*SNVVHL
Trigger: CAGGTGCACCACATTGCTCCACGGTGTGTTCAGAAG...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCCCTTGGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTCTCAAAGACTAGCATaGTTCTGTCCAATACCTTGC +
Preference number: 4 (lower is better)
Translates to: PLGPGHLHADLMLLLREPSQRLA*FCPIPC
Trigger: GCAAGGTATTGGACAGAACCATGCTAGTCTTTGAGA...CGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR CAA 72 bp AGTTCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTaGGGGACCAGCCAGACCACTCCTCCACTCCAGTGG +
Preference number: 4 (lower is better)
Translates to: SSKAYAKPILFC*GTSQTTPPLQW
Trigger: CCACTGGAGTGGAGGAGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TTGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCAGCCGATAATTGGGCATGCTTCTTCTCCGTaGACCGTGTGCCCTCACAGT +
Preference number: 4 (lower is better)
Translates to: LREQKTISVKYHIQPIIGHASSP*TVCPHS
Trigger: ACTGTGAGGGCACACGGTTCACGGAGAAGAAGCATG...CCCAATTATCGGCTGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGTTTGGCTGTCACTGCTaGGAGGAACAGTCGATGCAA +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLFGCHC*EEQSMQ
Trigger: TTGCATCGACTGTTCCTCTCAGCAGTGACAGCCAAA...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCTTGCAGATGGGGAAATaGGTCAGCAAGGAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLLQMGK*VSKEKC
Trigger: ACACTTTTCCTTGCTGACTCATTTCCCCATCTGCAA...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGGATGGGTGAAGGTATTTaGGGAGGCGTGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TFLKLLTVMAKPLVRGNRMGEGI*GGVMSF
Trigger: GAAGCTCATCACGCCTCCTCAAATACCTTCACCCAT...CCTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGTGCTGTGAATGGTATTaGATGTCCTGGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRCCEWY*MSWTKR
Trigger: CCTCTTGGTCCAGGACATTCAATACCATTCACAGCA...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCATGACTCTTACCCAGTaGAAAGCTTTACTAACACAG +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSMTLTQ*KALLTQ
Trigger: CTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCAT...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCGGCTCTGCAGCGTTGTaGCTTAGACACTTTACAAGT +
Preference number: 4 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPGSAAL*LRHFTS
Trigger: ACTTGTAAAGTGTCTAAGTCACAACGCTGCAGAGCC...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGACGACAAAAGTCAACTaGAGAGACCCAGTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VATVLRSCSHLREQKTISTTKVN*RDPVPK
Trigger: CTTTGGAACTGGGTCTCTTCAGTTGACTTTTGTCGT...CGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGATCTTCCGGAAGAGCTaGTTGTTAATGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLIFRKS*LLMGQR
Trigger: CCTCTGGCCCATTAACAAGCAGCTCTTCCGGAAGAT...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGCATTCAGTTTCTGCTTaGTGTCAGAGTTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWHSVSA*CQSCRR
Trigger: CCTACGGCAACTCTGACAGCAAGCAGAAACTGAATG...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGCTTACGCCAGGAGACTaGACTGCAGAGACCGAGCGA +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKLTPGD*TAETER
Trigger: TCGCTCGGTCTCTGCAGTGCAGTCTCCTGGCGTAAG...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAGCACACGGTGCTTCATaGCCTGTGCAGGGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGAHGAS*PVQGGQ
Trigger: CTGCCCACCCTGCACAGGGCATGAAGCACCGTGTGC...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCGCAAGTCTGGACCACTaGTTTAGAGAAAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: RSTRACSQTRKATHHAHLASLDH*FRESWI
Trigger: AATCCAGCTTTCTCTAAAGCAGTGGTCCAGACTTGC...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGCTCCGGTTTTGGAGTaGAGAGGGATTGGCATTTGT +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLAPVLE*RGIGIC
Trigger: ACAAATGCCAATCCCTCTGCACTCCAAAACCGGAGC...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGTCAATTTCAAACTTGTaGTTGAGAACCACGATGGCA +
Preference number: 4 (lower is better)
Translates to: LQESPRIWPVTSGDDPALSISNL*LRTTMA
Trigger: TGCCATCGTGGTTCTCAACCACAAGTTTGAAATTGA...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR CCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGGGTGCTGCAAACTGGTaGCAACCGTCTTGCGATCCT +
Preference number: 4 (lower is better)
Translates to: SLAVFASDASKEAPVVALGAANW*QPSCDP
Trigger: AGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACC...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCGGAGGTGCTGCAAACTaGTGGCAACCGTCTTGCGAT +
Preference number: 4 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGGGAAN*WQPSCD
Trigger: ATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCC...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCATTTCTTCAGGGAGTTaGGTCCATCTTCAAGACTTA +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSISSGS*VHLQDL
Trigger: TAAGTCTTGAAGATGGACCCAACTCCCTGAAGAAAT...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCCCTTGGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGCTAGAGAATCTTCACTaGATACCTTGCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: PLGPGHLHADLMLLLREPLENLH*IPCFTL
Trigger: AAGTGTGAAGCAAGGTATCCAGTGAAGATTCTCTAG...CGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGAGTCCGAAAGCATTaGCAAAGCCAGCACATCTGT +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLGVRKH*QSQHIC
Trigger: ACAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCC...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGAAGAATCAGAAAGCATaGTGGAGTCCGAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRKNQKA*WSPKAL
Trigger: CAATGCTTTCGGACTCCACCATGCTTTCTGATTCTT...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCCCGCACTCAGCAGCCTaGAATGCCAGCTCTCATGCC +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIPHSAA*NASSHA
Trigger: GGCATGAGAGCTGGCATTCCAGGCTGCTGAGTGCGG...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACTCTCAAAGACTAGCATaGTTCTGTCCAATACCTTGC +
Preference number: 4 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHSQRLA*FCPIPC
Trigger: GCAAGGTATTGGACAGAACCATGCTAGTCTTTGAGA...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACTCTGATTCAGCTATGTGACACAGGCTCAACCGCTACACGCTGCAGTGTGTTGAGGACAGTCTGCAGTTaGTCTTCCGGAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLIQLCDTGSTATRCSVLRTVCS*SSGRAA
Trigger: AGCAGCTCTTCCGGAAGATCAACTGCAGACTGTCCT...CAACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCACATAGCTGAATCAGAGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp AAAATACTTCTCGGGGTAGTCCCGGAGGTGCTGCAAACTGGTGGCAACCGTCTTCATCACCAGCTGGCTTaGGATGCAATAGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: KILLGVVPEVLQTGGNRLHHQLA*DAIGQS
Trigger: AGACTGTCCTATTGCATCTCAAGCCAGCTGGTGATG...AAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACTACCCCGAGAAGTATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGTTTCAAACTTGTGGTTaGGAACCACGATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRFQTCG*EPRWHF
Trigger: AAAATGCCATCGTGGTTCTCAACCACAAGTTTGAAA...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR TCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGTTTCAAAAGCCATTGTaGCAGGTCAAAACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRFQKPL*QVKTLE
Trigger: CTCCAGGGTTTTGACCTGTCACAATGGCTTTTGAAA...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGAGCTATTTCCAGATACTaGAAAGATCTAAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRAISRY*KDLSRC
Trigger: GCACCTACTTAGATCTTTTCAGTATCTGGAAATAGC...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCATCTGATTCAGCTATGTaGCACAGGCTCAACCGCTAC +
Preference number: 4 (lower is better)
Translates to: ILLPLARTEDHLGEVPHPSDSAM*HRLNRY
Trigger: GTAGCGGTTGAGCCTGTGTCACATAGCTGAATCAGA...TGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCCGTGCTTGCCATCTCTaGTCTCACAAATGCTCACGG +
Preference number: 4 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGRACHL*SHKCSR
Trigger: CCGTGAGCATTTGTGAGAGCAGAGATGGCAAGCACG...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTTGGTCTCCACGCACGTaGTTGCCATCTCTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVWSPRT*LPSLLS
Trigger: TGAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCA...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCCGCTCCCATCAAGCCTaGCTGCAGGGCCGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: KKSIESFSQIVRLLFSKARSHQA*LQGRQR
Trigger: TCGCTGGCGGCCCTGCAGGCAGGCTTGATGGGAGCG...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTTTGCCCACAGATCTCTaGACACGGTGCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVLPTDL*TRCFMP
Trigger: GGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAA...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGATGTTACACATGGGCTTaGCTAAGTATTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRCYTWA*LSISFS
Trigger: AGAGAAGGAAATACTTAGGCAAGCCCATGTGTAACA...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCAGGAGCCCATCCCTGTaGTCAGAGAGATGGGACTCC +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIRSPSL*SERWDS
Trigger: GGAGTCCCATCTCTCTGAGCACAGGGATGGGCTCCT...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCCTGGAGAACAGCTTTaGTATTTCACTGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRPGEQL*YFTGNS
Trigger: GGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGATCCTTCCTCATGATCTaGAAAGATACAGAGAGAATG +
Preference number: 4 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRSFLMI*KDTERM
Trigger: CATTCTCTCTGTATCTTTGCAGATCATGAGGAAGGA...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TCCCACTTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTTTATGCACCACTTCCACTTaGTGCTCAGCGATCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SHFDKLGRAPRFGARKALCTTST*CSAIFS
Trigger: CGAGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCA...TAAAGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTAACCAGAAGCTGAGATaGAGCCGGCTGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTNQKLR*SRLGSE
Trigger: TTCTGAACCCAGCCGGCTCCATCTCAGCTTCTGGTT...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGGAGGTCCATGATGCGTaGACGCTCTTATTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLREVHDA*TLLFRN
Trigger: ATTTCTGAATAAGAGCGTCCACGCATCATGGACCTC...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGACCAGACTCCCTGGCTaGAGAGGTCGTGACTTCCGC +
Preference number: 4 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQTRLPG*RGRDFR
Trigger: GCGGAAGTCACGACCTCTCCAGCCAGGGAGTCTGGT...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCCCTTGGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTTTTCACTTTATCTCTaGCAACCAAGGGTTACAGAA +
Preference number: 4 (lower is better)
Translates to: PLGPGHLHADLMLLLREPFSLYL*QPRVTE
Trigger: TTCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAA...CGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTCCTAAGGTCACGTCCTaGGCTTTTGCCCACAGATCT +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTPKVTS*AFAHRS
Trigger: AGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGG...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATCATCTTCCAAATGGTTaGTGTCTTTTTAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDHLPNG*CLFKSP
Trigger: GGGACTCTTAAAAAGACACCAACCATTTGGAAGATG...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGCATCTTCCAAATGGTTaGTGTCTTTTTAAGAGTCCC +
Preference number: 4 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRHLPNG*CLFKSP
Trigger: GGGACTCTTAAAAAGACACCAACCATTTGGAAGATG...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCAAAGAATCAGAAAGCATaGTGGAGTCCGAAAGCATTG +
Preference number: 4 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWAKNQKA*WSPKAL
Trigger: CAATGCTTTCGGACTCCACCATGCTTTCTGATTCTT...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAACTTGAAGCCCCTGAATaGTCCCTTGGCAGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKLEAPE*SLGRGK
Trigger: TTTGCCTCTGCCAAGGGACCATTCAGGGGCTTCAAG...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGGTGATGACTGGAACCTaGGCCTTCATTACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKVMTGT*AFITGS
Trigger: GGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCAC...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AAATCCCACTTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTCCCACTTTGACAAACTaGGTCGGGCACCCAGATTTG +
Preference number: 4 (lower is better)
Translates to: KSHFDKLGRAPRFGARKAPTLTN*VGHPDL
Trigger: CAAATCTGGGTGCCCGACCCAGTTTGTCAAAGTGGG...AGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAAGTGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR TCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGTTAGAAACCAGAAGCTaGGATGGAGCCGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKLETRS*DGAGWV
Trigger: AACCCAGCCGGCTCCATCTCAGCTTCTGGTTTCTAA...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGAGGACAGTCTGCAGTTaGTCTTCCGGAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKRTVCS*SSGRAA
Trigger: AGCAGCTCTTCCGGAAGATCAACTGCAGACTGTCCT...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGGTTTTCAAACTTGTGGTTaGGAACCACGATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GNRLAILLPLARTEDHLGFQTCG*EPRWHF
Trigger: AAAATGCCATCGTGGTTCTCAACCACAAGTTTGAAA...ACCGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR TCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACCCGTGAGTAGGATCTaGAACACCAAAGCCACGGGC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGPVSRI*NTKATG
Trigger: GCCCGTGGCTTTGGTGTTTCAGATCCTACTCACGGG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CAGCCAGGCCGAGCACTCGTCATCGTCTTCAGGGATGTCTTCCAGTGGGATCCTCAGGCTGTACGTTCATaGTGTTTGTGTTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: QPGRALVIVFRDVFQWDPQAVRS*CLCSIS
Trigger: TGAAATTGAACACAAACATCATGAACGTACAGCCTG...AGGATCCCACTGGAAGACATCCCTGAAGACGATGACGAGTGCTCGGCCTGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAAGCATTTTATCAGGGGTaGCTTTGGCTGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKAFYQG*LWLSLL
Trigger: CAGCAGTGACAGCCAAAGTCACCCCTGATAAAATGC...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGATGTCGGCTCTGATTTaGCCCTCATCAGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKMSALI*PSSEQD
Trigger: GTCCTGCTCTGATGAGGGTCAAATCAGAGCCGACAT...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAATGGGTGAAGGTATTTaGGGAGGCGTGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKMGEGI*GGVMSF
Trigger: GAAGCTCATCACGCCTCCTCAAATACCTTCACCCAT...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCGTGGTGGAGGCATTATaGGGGGACTACTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIVVEAL*GDYSTG
Trigger: TCCTGTGGAGTAGTCCCCTCATAATGCCTCCACCAC...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGCCCCGTGCCAAGGCGTaGCTAGGACCAGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQPRAKA*LGPEES
Trigger: TGATTCTTCTGGTCCTAGTCACGCCTTGGCACGGGG...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCAAGGGAAGCACCCTTCTaGGATGAAACCAATTTCTTG +
Preference number: 4 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPREAPF*DETNFL
Trigger: CAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCCT...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAGAGATGGGACTCCAATaGGGAGACACACTATGTAGG +
Preference number: 4 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKEMGLQ*GDTLCR
Trigger: CCTACATAGTGTGTCTCCTCATTGGAGTCCCATCTC...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAAAAGCAAAAGAGGGGCTaGTCCATCTCCCGTGAACAT +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKKQKRG*SISREH
Trigger: ATGTTCACGGGAGATGGATCAGCCCCTCTTTTGCTT...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGAAGCAAAAGAGGGGCTaGTCCATCTCCCGTGAACAT +
Preference number: 4 (lower is better)
Translates to: SLAVFASDASKEAPVVALKQKRG*SISREH
Trigger: ATGTTCACGGGAGATGGATCAGCCCCTCTTTTGCTT...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAAGACAGTACCCTAGGGTaGCATGACAGCCCATATATC +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKDSTLG*HDSPYI
Trigger: GATATATGGGCTGTCATGTCACCCTAGGGTACTGTC...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAATCCCACTTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTAATGAAATCCCACTTTaGCAAACTGGGTCGGGCACC +
Preference number: 4 (lower is better)
Translates to: KSHFDKLGRAPRFGARKANEIPL*QTGSGT
Trigger: GGTGCCCGACCCAGTTTGTCAAAGTGGGATTTCATT...AGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAAGTGGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR GCA 90 bp ACTCTGATTCAGCTATGTGACACAGGCTCAACCGCTACACGCTGCAGTGTGTTGATCTTCCGGAAGAGCTaGTTGTTAATGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: TLIQLCDTGSTATRCSVLIFRKS*LLMGQR
Trigger: CCTCTGGCCCATTAACAAGCAGCTCTTCCGGAAGAT...CAACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCACATAGCTGAATCAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR GCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGGATCCTGCTCCCACTTaGGCGAACAGAAGACCATCT +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKDPAPT*ANRRPS
Trigger: AGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATC...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGATCCTTCCTAACTCATaGTCCAAATACCTATCGGTC +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRILPNS*SKYLSV
Trigger: GACCGATAGGTATTTGGAGCATGAGTTAGGAAGGAT...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTCAGGGTGGGCAGATGTaGTGGGCGCTCCCATCAAGC +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAQGGQM*WALPSS
Trigger: GCTTGATGGGAGCGCCCAGCACATCTGCCCACCCTG...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAACAAGGCTACACACCATaGACACCTCCACTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKQGYTP*TPPLLQ
Trigger: TTGGAGAAGTGGAGGTGTGCATGGTGTGTAGCCTTG...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTCCCCAGACCTCAAGCTaGATCTTCCAAATGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTPQTSS*IFQMVG
Trigger: ACCAACCATTTGGAAGATGCAGCTTGAGGTCTGGGG...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CCCTTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCAGCTTTTACAAAGCTTTaGATGCATTTGTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLLCARDTLRWSPRTCLPAFTKL*MHLFRG
Trigger: TCCTCTAAACAAATGCATGCAAAGCTTTGTAAAAGC...TGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCGCTTTTACAAAGCTTTaGATGCATTTGTTTAGAGGA +
Preference number: 4 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSAFTKL*MHLFRG
Trigger: TCCTCTAAACAAATGCATGCAAAGCTTTGTAAAAGC...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGGCCCCTCAAGAGACGTaGAAACCAAAGTATTTGTTT +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWAPQET*KPKYLF
Trigger: AAACAAATACTTTGGTTTGCACGTCTCTTGAGGGGC...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTGCGCGAACAGAAGACCATCTCGGTGAAGTACCACATCCAGCCGATAATTGGGCCAGTTCCAAAGGCATaGAAGCTACGTGCAAGAGGT +
Preference number: 4 (lower is better)
Translates to: LREQKTISVKYHIQPIIGPVPKA*KLRARG
Trigger: ACCTCTTGCACGTAGCTTGCATGCCTTTGGAACTGG...CCCAATTATCGGCTGGATGTGGTACTTCACCGAGATGGTCTTCTGTTCGCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAGGTGGGCAGATGTGCTaGGCGCTCCCATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRGGQMC*ALPSSL
Trigger: CAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACC...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGAGGTGGGCAGATGTGCTaGGCGCTCCCATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRGGQMC*ALPSSL
Trigger: CAGGCTTGATGGGAGCGCCCAGCACATCTGCCCACC...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAACCCCCATTTTGCAGATaGGGAAATGAGTCAGCAAGG +
Preference number: 4 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKPPFCR*GNESAR
Trigger: CCTTGCTGACTCATTTCCCCATCTGCAAAATGGGGG...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAGAAGCAGTGGCCTCCTaGTCAGCTACAGACACAGGC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGEAVAS*SATDTG
Trigger: GCCTGTGTCTGTAGCTGACCAGGAGGCCACTGCTTC...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACGGCTGAATGGCTGTTaGCTCTCAGCAGCACCTGTC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGRLNGC*LSAAPV
Trigger: GACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTCTTCTGAACACACCGTaGAGCAATGTGGTGCACCTG +
Preference number: 4 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVLLNTP*SNVVHL
Trigger: CAGGTGCACCACATTGCTCCACGGTGTGTTCAGAAG...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp CAGCCAGACCACTCCTCCACTCCAGTGGGGCCTTTTTaGTGTCTTTCACATCACTGTTACAAGTTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPDHSSTPVGPF*CLSHHCYKLWL
Trigger: CAGCCACAACTTGTAACAGTGATGTGAAAGACACAAAAAAGGCCCCACTGGAGTGGAGGAGTGGTCTGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGAAGGTGGCACAGGAACTaGGACTTCAGCAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRRWHRN*DFSSPA
Trigger: CGCGGGACTGCTGAAGTCTCAGTTCCTGTGCCACCT...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTACCTCTTATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAGGTGGCACAGGAACTaGGACTTCAGCAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: VPLMIAHKKLLRLTPSKNRWHRN*DFSSPA
Trigger: CGCGGGACTGCTGAAGTCTCAGTTCCTGTGCCACCT...ATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCATAAGAGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCAGAAGACCATCTCGGTaGAGTACCACATCCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIRRPSR*STTSSR
Trigger: TCGGCTGGATGTGGTACTTCACCGAGATGGTCTTCT...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTGTTCGTGGCAACAGGTaGTGCTTGAGGCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAVRGNR*CLRRGS
Trigger: GCTGCCTCGCCTCAAGCATCACCTGTTGCCACGAAC...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGTGCTTGTGTGTTGTGTaGTACCAGAGCCAATTCAGA +
Preference number: 4 (lower is better)
Translates to: EKEVQISPQHATFSFGSKCLCVV*YQSQFR
Trigger: TCTGAATTGGCTCTGGTATCACACAACACACAAGCA...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCCGTCACGTCTGGGGATaGCCCTGCACTGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: KKSIESFSQIVRLLFSKARHVWG*PCTALQ
Trigger: CTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACG...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCGATGCTGGTCTCTTCTaGACACACCGTGGAGCAATG +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIDAGLF*THRGAM
Trigger: CATTGCTCCACGGTGTGTTCAGAAGAGACCAGCATC...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGTTTCAAAAGCCATTGTaGCAGGTCAAAACCCTGGAG +
Preference number: 4 (lower is better)
Translates to: YISQAPHGDGEALGSWQQFQKPL*QVKTLE
Trigger: CTCCAGGGTTTTGACCTGTCACAATGGCTTTTGAAA...CTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTTGCTGTGAATGGTATTaGATGTCCTGGACCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTCCEWY*MSWTKR
Trigger: CCTCTTGGTCCAGGACATTCAATACCATTCACAGCA...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACCACTAAGGAGGATATaGAGAGGCCACCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGPLRRI*RGHQFP
Trigger: GGGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAAGCCCTGCCCTCCCCTaGAGCCTAAAATACCCTTTC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGSPALP*SLKYPF
Trigger: GAAAGGGTATTTTAGGCTGCAGGGGAGGGCAGGGCT...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTCGCTCCCATCAAGCCTaGCTGCAGGGCCGCCAGCGA +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNIRSHQA*LQGRQR
Trigger: TCGCTGGCGGCCCTGCAGGCAGGCTTGATGGGAGCG...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGATTGCCCACAGATCTCTaGACACGGTGCTTCATGCCC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGLPTDL*TRCFMP
Trigger: GGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAA...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGCCCCAGACCTCAAGCTaGATCTTCCAAATGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKPQTSS*IFQMVG
Trigger: ACCAACCATTTGGAAGATGCAGCTTGAGGTCTGGGG...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGTGTTACACATGGGCTTaGCTAAGTATTTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWCYTWA*LSISFS
Trigger: AGAGAAGGAAATACTTAGGCAAGCCCATGTGTAACA...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCCGTGGAGCAATGTGGTaGACCTGCAGATGCCGCACT +
Preference number: 4 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLRGAMW*TCRCRT
Trigger: AGTGCGGCATCTGCAGGTGCACCACATTGCTCCACG...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAACATCCAGCCGATAATTaGGACATAGGCCAGCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKHPADN*DIGQLF
Trigger: AAAGAGCTGGCCTATGTCCCAATTATCGGCTGGATG...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATTTTTCACTTTATCTCTaGCAACCAAGGGTTACAGAA +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNFSLYL*QPRVTE
Trigger: TTCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAA...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAATTTCAGCTGCGCACCTaGAGAAAGACATATCCTTCC +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKFQLRT*RKTYPS
Trigger: GGAAGGATATGTCTTTCTCCAGGTGCGCAGCTGAAA...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAACCCCTCCGAGAGACTaGCCCGATAATCCAGGCGCA +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRTPPRD*PDNPGA
Trigger: TGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGT...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTCAGAGTTCAGGTGAATaGCGTAACTCAGCATCACGG +
Preference number: 4 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVQSSGE*RNSASR
Trigger: CCGTGATGCTGAGTTACGCCATTCACCTGAACTCTG...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGATCGTGTTCACTATATaGTGGCAGAATCAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLIVFTI*WQNQSS
Trigger: ACTGGACTGATTCTGCCACCATATAGTGAACACGAT...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTTTTGCCCACAGATCTCTGCACACGGTGCTTCATGCCCTGTGCAGGGTGGGCAAAGATACAGAGAGAATaGCATTCCAAAATTCCATGG +
Preference number: 4 (lower is better)
Translates to: LLPTDLCTRCFMPCAGWAKIQRE*HSKIPW
Trigger: CCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT...TGCCCACCCTGCACAGGGCATGAAGCACCGTGTGCAGAGATCTGTGGGCAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTACCTCTTATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATGTCCCGCGAGGTCCATaGTGCGTGGACGCTCTTATT +
Preference number: 4 (lower is better)
Translates to: VPLMIAHKKLLRLTPSKNVPRGP*CVDALI
Trigger: AATAAGAGCGTCCACGCATCATGGACCTCGCGGGAC...ATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCATAAGAGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCAGGTGGCACAGGAACTaGGACTTCAGCAGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: KKSIESFSQIVRLLFSKARWHRN*DFSSPA
Trigger: CGCGGGACTGCTGAAGTCTCAGTTCCTGTGCCACCT...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGTTTCCTTCCCATACTTaGGGTAGGCGCGCGGGTCCG +
Preference number: 4 (lower is better)
Translates to: MIAHKKLLRLTPSKNKKQFPSHT*GRRAGP
Trigger: CGGACCCGCGCGCCTACCTCAAGTATGGGAAGGAAA...CTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGACAGTCATATACAGCTaGAACTACATTTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRTVIYS*NYISQA
Trigger: AGCTTGAGAAATGTAGTTTCAGCTGTATATGACTGT...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGAGCTTTAAGCTAGAATaGGATGGAAAGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: EKEVQISPQHATFSFGSKSFKLE*DGKVGK
Trigger: CTTTCCCACCTTTCCATCTCATTCTAGCTTAAAGCT...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp TACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGGAAGCAGAAGCTAATTaGAATTCCATTACTCAGGCC +
Preference number: 4 (lower is better)
Translates to: YISQAPHGDGEALGSWQQEAEAN*NSITQA
Trigger: GGCCTGAGTAATGGAATTTCAATTAGCTTCTGCTTC...CTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp ACCAGTTCCCCAAGGTTCCCTTCGGATGGTGACACCTCCCTGAGTCAGTCATTCAACTTTCCTTCCTCATaGTCTGCAAAGATACAGAGA +
Preference number: 4 (lower is better)
Translates to: TSSPRFPSDGDTSLSQSFNFPSS*SAKIQR
Trigger: TCTCTGTATCTTTGCAGATCATGAGGAAGGAAAGTT...GAATGACTGACTCAGGGAGGTGTCACCATCCGAAGGGAACCTTGGGGAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTAGATGGTGCATTCCGTaGCCGACCACCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGARWCIP*PTTTPA
Trigger: TGCTGGAGTGGTGGTCGGGCACGGAATGCACCATCT...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR GCA 90 bp ATATGGATGGGAGTGAAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAAGATGGTGCATTCCGTaGCCGACCACCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: IWMGVKSKSNYSCVTLSRRWCIP*PTTTPA
Trigger: TGCTGGAGTGGTGGTCGGGCACGGAATGCACCATCT...TCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTTCACTCCCATCCATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR GCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAACCGTCTTGCGATCCTaGTCCCACTTGCGCGAACAG +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRTVLRS*SHLREQ
Trigger: CTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGT...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATCCTAACATACAAATCTaGATGGTATTTCTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNPNIQI*MVFLSV
Trigger: AACGGAAAGAAATACCATGCAGATTTGTATGTTAGG...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CTCCTAACATACAAATCTGCATGGTATTTCTTTCCGTTTAGGACTCCCAGCAGTGTGCTTCATGCCCTGTaGAGGGTGGGCAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: LLTYKSAWYFFPFRTPSSVLHAL*RVGRCA
Trigger: AGCACATCTGCCCACCCTGCACAGGGCATGAAGCAC...ACTGCTGGGAGTCCTAAACGGAAAGAAATACCATGCAGATTTGTATGTTAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR GCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGCCTGCTTCTATAAGCTaGAGGAGTCGCCTAGGATAT +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKPASIS*RSRLGY
Trigger: ATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGG...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTCGTGGAGCAATGTGGTaGACCTGCAGATGCCGCACT +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGARGAMW*TCRCRT
Trigger: AGTGCGGCATCTGCAGGTGCACCACATTGCTCCACG...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTTTAGATCTAACCACTTCCACTTGCTaGTCAGCGATCTTCTCGGAA +
Preference number: 4 (lower is better)
Translates to: FDKLGRAPRFGARKALDLTTSTC*SAIFSE
Trigger: TTCCGAGAAGATCGCTGAGCAGCAAGTGGAAGTGGT...TAGATCTAAAGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR GCA 90 bp TTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTTTAGATCTATGCTTGGAGAAACCATaGACCACTTCCACTTGCTGC +
Preference number: 4 (lower is better)
Translates to: FDKLGRAPRFGARKALDLCLEKP*TTSTCC
Trigger: GCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCA...TAGATCTAAAGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTGAGGTCCATGATGCGTaGACGCTCTTATTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTEVHDA*TLLFRN
Trigger: ATTTCTGAATAAGAGCGTCCACGCATCATGGACCTC...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGGACTCCCAGCAGTGTTaGATTTTCATTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWDSQQC*IFIISE
Trigger: TTCAGAAATAATGAAAATCCAACACTGCTGGGAGTC...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGGACTCCCAGCAGTGTTaGATTTTCATTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRDSQQC*IFIISE
Trigger: TTCAGAAATAATGAAAATCCAACACTGCTGGGAGTC...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGATTTCTTCAGGGAGTTaGGTCCATCTTCAAGACTTA +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLISSGS*VHLQDL
Trigger: TAAGTCTTGAAGATGGACCCAACTCCCTGAAGAAAT...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTTTTCAGCTGCGCACCTaGAGAAAGACATATCCTTCC +
Preference number: 4 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVFQLRT*RKTYPS
Trigger: GGAAGGATATGTCTTTCTCCAGGTGCGCAGCTGAAA...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCTGGAGAGTTGCATTTTaGGGGGCTCTCCTAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIWRVAF*GALLEA
Trigger: AGCTTCTAGGAGAGCCCCCCAAAATGCAACTCTCCA...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCACAGACTCCCAGCAGTGTTaGATTTTCATTATTTCTACA +
Preference number: 4 (lower is better)
Translates to: GHLHADLMLLLREPCALTDSQQC*IFIIST
Trigger: TGTAGAAATAATGAAAATCCAACACTGCTGGGAGTC...TGTGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
3UTR CAA 72 bp CTTCATTACGGGCTCCGGTTTTGGAGTGCAGAGGGATaGGCATTTGTAAAGACTGCTTGCTTACCCTTTGTC +
Preference number: 4 (lower is better)
Translates to: LHYGLRFWSAEG*AFVKTACLPFV
Trigger: GACAAAGGGTAAGCAAGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCAAAACCGGAGCCCGTAATGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAATATTAAGCTCTATAAGGCGCGCGGGTCCGTaGAGATGGTGCATTCCGTGC +
Preference number: 4 (lower is better)
Translates to: KSKSNYSCVTLSRILSSIRRAGP*RWCIPC
Trigger: GCACGGAATGCACCATCTTCACGGACCCGCGCGCCT...TATAGAGCTTAATATTCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp ACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGGACAGTCATATACAGCTaGAACTACATTTCTCAAGCT +
Preference number: 4 (lower is better)
Translates to: TFLKLLTVMAKPLVRGNRTVIYS*NYISQA
Trigger: AGCTTGAGAAATGTAGTTTCAGCTGTATATGACTGT...CCTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp CTCCTAACATACAAATCTGCATGGTATTTCTTTCCGTTTAGGACTCCCAGCAGTGCAGTTGTTGTGTGCTaGGGAGATGGTGACCTCCGT +
Preference number: 4 (lower is better)
Translates to: LLTYKSAWYFFPFRTPSSAVVVC*GDGDLR
Trigger: ACGGAGGTCACCATCTCCTCAGCACACAACAACTGC...ACTGCTGGGAGTCCTAAACGGAAAGAAATACCATGCAGATTTGTATGTTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR TCA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTAGCTTTAAGCTAGAATaGGATGGAAAGGTGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTSFKLE*DGKVGK
Trigger: CTTTCCCACCTTTCCATCTCATTCTAGCTTAAAGCT...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGAAAACGCCTTCTCGGCTaGATGGCTGTTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRKRLLG*MAVGSQ
Trigger: CTGAGAGCCAACAGCCATTCAGCCGAGAAGGCGTTT...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTACCTCTTATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATGGGGGAATGCACTTCTaGCTTACCCCTAACAGCCCA +
Preference number: 4 (lower is better)
Translates to: VPLMIAHKKLLRLTPSKNGGMHF*LTPNSP
Trigger: TGGGCTGTTAGGGGTAAGTCAGAAGTGCATTCCCCC...ATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCATAAGAGGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR GCA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGAGGATTCTTAAAGTGTaGTCTTTTACCCTTGACACA +
Preference number: 4 (lower is better)
Translates to: FPASISCRSRLGYGPSRLRILKV*SFTLDT
Trigger: TGTGTCAAGGGTAAAAGAGCACACTTTAAGAATCCT...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAGGGATGACCCTGCACTaGTCTCCAGATTTCACTCAA +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGGMTLH*SPDFTQ
Trigger: TTGAGTGAAATCTGGAGAGCAGTGCAGGGTCATCCC...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGTTCTGTCCAATACCTTaGTCTAATTCCAATTCATTC +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRFCPIP*SNSNSF
Trigger: GAATGAATTGGAATTAGAGCAAGGTATTGGACAGAA...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGAAGGCGTCTCCTTCCTaGCAGCCTTTGGCACATGGA +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRKASPS*QPLAHG
Trigger: TCCATGTGCCAAAGGCTGCCAGGAAGGAGACGCCTT...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGTCAATTTCAAACTTGTaGTTGAGAACCACGATGGCA +
Preference number: 4 (lower is better)
Translates to: YISQAPHGDGEALGSWQQSISNL*LRTTMA
Trigger: TGCCATCGTGGTTCTCAACCACAAGTTTGAAATTGA...CTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCGAGTCGCCTAGGATATaGCCCGTCACGTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAESPRI*PVTSGD
Trigger: ATCCCCAGACGTGACGGGCCATATCCTAGGCGACTC...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGAATCAGAAAGCATGGTaGAGTCCGAAAGCATTGGCA +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKNQKAW*SPKALA
Trigger: TGCCAATGCTTTCGGACTCCACCATGCTTTCTGATT...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGTACGGGCTCCGGTTTTaGAGTGCAGAGGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRYGLRF*SAEGLA
Trigger: TGCCAATCCCTCTGCACTCCAAAACCGGAGCCCGTA...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCATTCCAAAATTCCATaGATGACTTTTCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRHSKIP*MTFLNV
Trigger: GACATTCAGAAAAGTCATCCATGGAATTTTGGAATG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTATGTCGGCTCTGATTTaGCCCTCATCAGAGCAGGAC +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAMSALI*PSSEQD
Trigger: GTCCTGCTCTGATGAGGGTCAAATCAGAGCCGACAT...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCTTGCAGATGGGGAAATaGGTCAGCAAGGAAAAGTGT +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHILQMGK*VSKEKC
Trigger: ACACTTTTCCTTGCTGACTCATTTCCCCATCTGCAA...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCGCAGTTGTTGTGTGCTaGGGAGATGGTGACCTCCGT +
Preference number: 4 (lower is better)
Translates to: KKSIESFSQIVRLLFSKAAVVVC*GDGDLR
Trigger: ACGGAGGTCACCATCTCCTCAGCACACAACAACTGC...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCTGCACATTCAGGATGTaGCTTCAGCTTCATTCATCC +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHICTFRM*LQLHSS
Trigger: GGATGAATGAAGCTGAAGTCACATCCTGAATGTGCA...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ATATGGATGGGAGTGAAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAGACAAGTGGTGGGGCTaGACCAGAGAAATGTGTGAG +
Preference number: 4 (lower is better)
Translates to: IWMGVKSKSNYSCVTLSRDKWWG*TREMCE
Trigger: CTCACACATTTCTCTGGTTCAGCCCCACCACTTGTC...TCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTTCACTCCCATCCATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR GCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGATGCATGCTGATCTCATaGTTCTTCTCCGTGAACCGT +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGCMLIS*FFSVNR
Trigger: ACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCA...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACATCTCACAAATCACTaGAGAATGCCCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGHLTNH*RMPRLY
Trigger: GTACAGCCTGGGCATTCTGCAGTGATTTGTGAGATG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGAGGATTCTTAAAGTGTaGTCTTTTACCCTTGACACA +
Preference number: 4 (lower is better)
Translates to: EKEVQISPQHATFSFGSKRILKV*SFTLDT
Trigger: TGTGTCAAGGGTAAAAGAGCACACTTTAAGAATCCT...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTAAGCCCATTCTGTTTTaGTTGGGGACCAGCCAGACC +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAKPILF*LGTSQT
Trigger: GGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTT...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTTGGTGCACCTGCAGATaGCGCACTCAGCAGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNIWCTCR*RTQQPG
Trigger: TCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCA...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGGGCATTTGTAAAGACTaGTTGCTTACCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKGICKD*LLTLCL
Trigger: CAGACAAAGGGTAAGCAAGCAGTCTTTACAAATGCC...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGCAGTCCAGTAAGCTGTaGTGTCTAGTGGTATCCACA +
Preference number: 4 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQQSSKL*CLVVST
Trigger: TGTGGATACCACTAGACAGCACAGCTTACTGGACTG...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATCACCATGGGCGTCTCTaGGAAGGTGCCCGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDHHGRL*EGARPV
Trigger: TACAGGACGGGCACCTTCCCAGAGACGCCCATGGTG...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTATGCTCACGGGCTCCTaGACCTGTGTCTCCTGCCAG +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNIMLTGS*TCVSCQ
Trigger: CTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCAT...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGCCTAAGGTCACGTCCTaGGCTTTTGCCCACAGATCT +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRPKVTS*AFAHRS
Trigger: AGATCTGTGGGCAAAAGCCCAGGACGTGACCTTAGG...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTAAAATTGAATGTCTGTaGGCCCCCGGATCTATGTTT +
Preference number: 4 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVKIECL*APGSMF
Trigger: AAACATAGATCCGGGGGCCCACAGACATTCAATTTT...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGAGTATGTGGCAAGTCTaGACCACTGCTTTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKSMWQV*TTALEK
Trigger: TTTCTCTAAAGCAGTGGTCCAGACTTGCCACATACT...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCTGCTTACCCTTTGTCTaGCATGCACATTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHICLPFV*HAHSGC
Trigger: ACATCCTGAATGTGCATGCCAGACAAAGGGTAAGCA...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGTGTTTGGCAAAGATCTaGCTAAAACTAGTACTATGG +
Preference number: 4 (lower is better)
Translates to: YISQAPHGDGEALGSWQQCLAKI*LKLVLW
Trigger: CCATAGTACTAGTTTTAGCCAGATCTTTGCCAAACA...CTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp TTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTTTAGATCTAATTCACCACTCTGCTTaGAGAAACCATGCACCACTT +
Preference number: 4 (lower is better)
Translates to: FDKLGRAPRFGARKALDLIHHSA*RNHAPL
Trigger: AAGTGGTGCATGGTTTCTCCAAGCAGAGTGGTGAAT...TAGATCTAAAGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
3UTR CAA 72 bp TTGGAGTGCAGAGGGATTGGCATTTGTAAAGACTGCTaGCTTACCCTTTGTCTGGCATGCACATTCAGGATG +
Preference number: 4 (lower is better)
Translates to: LECRGIGICKDC*LTLCLACTFRM
Trigger: CATCCTGAATGTGCATGCCAGACAAAGGGTAAGCAAGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGAGGACAGTCTGCAGTTaGTCTTCCGGAAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MIAHKKLLRLTPSKNKKQRTVCS*SSGRAA
Trigger: AGCAGCTCTTCCGGAAGATCAACTGCAGACTGTCCT...CTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGAGACCTCCGTGTGACCTaGACATGGGTGAAGGTATTT +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRDLRVT*TWVKVF
Trigger: AAATACCTTCACCCATGTTCAGGTCACACGGAGGTC...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTAATGAGCCCAGAGCCTaGGATTCAAGATGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGANEPRA*DSRCWS
Trigger: AGACCAGCATCTTGAATCTCAGGCTCTGGGCTCATT...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTGAGATGGGACTCCAATaGGGAGACACACTATGTAGG +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAEMGLQ*GDTLCR
Trigger: CCTACATAGTGTGTCTCCTCATTGGAGTCCCATCTC...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGACCAGCTGGCTTGAGATaGAATAGGACAGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRPAGLR*NRTVCS
Trigger: ACTGCAGACTGTCCTATTGCATCTCAAGCCAGCTGG...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR GCA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGCCTAACATACAAATCTaGATGGTATTTCTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: EKEVQISPQHATFSFGSKPNIQI*MVFLSV
Trigger: AACGGAAAGAAATACCATGCAGATTTGTATGTTAGG...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAGAGAGGAACAGTCGATaGAAGCTCATCTCACAAATC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGERNSR*KLISQI
Trigger: GATTTGTGAGATGAGCTTGCATCGACTGTTCCTCTC...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCTGGCTGACAGCAGTCTaGAAAGGCCGCTGGAGATGC +
Preference number: 4 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVWLTAV*KGRWRC
Trigger: GCATCTCCAGCGGCCTTTGCAGACTGCTGTCAGCCA...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTGTGCTTCATGCCCTGTaGAGGGTGGGCAGATGTGCT +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNIVLHAL*RVGRCA
Trigger: AGCACATCTGCCCACCCTGCACAGGGCATGAAGCAC...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGGGGATGACCCTGCACTaGTCTCCAGATTTCACTCAA +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRGMTLH*SPDFTQ
Trigger: TTGAGTGAAATCTGGAGAGCAGTGCAGGGTCATCCC...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCCACTTTCCAGCCTCCCAGGCCTaGTCACAGACACATACTGCT +
Preference number: 4 (lower is better)
Translates to: TYTTLLTARLIIKMKSHFPASQA*SQTHTA
Trigger: AGCAGTATGTGTCTGTGAGCAGGCCTGGGAGGCTGG...AAAGTGGGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CCA 90 bp ATATGGATGGGAGTGAAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGACTTCCTGGCAGCCTTTaGCACATGGACTTAGAAACC +
Preference number: 4 (lower is better)
Translates to: IWMGVKSKSNYSCVTLSRLPGSL*HMDLET
Trigger: GGTTTCTAAGTCCATGTGCCAAAGGCTGCCAGGAAG...TCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTTCACTCCCATCCATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTAGGGACACGCTTCGTTaGTCTCCACGCACGTGCTTG +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNIRDTLR*SPRTCL
Trigger: CAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCT...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAATTTTTGGCACCTGTTaGCTGACAGCAGTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGIFGTC*LTAVCK
Trigger: TTTGCAGACTGCTGTCAGCCAACAGGTGCCAAAAAT...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGACAGAGTTCAGGTGAATaGCGTAACTCAGCATCACGG +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRQSSGE*RNSASR
Trigger: CCGTGATGCTGAGTTACGCCATTCACCTGAACTCTG...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCAAAATTGAATGTCTGTaGGCCCCCGGATCTATGTTT +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIKIECL*APGSMF
Trigger: AAACATAGATCCGGGGGCCCACAGACATTCAATTTT...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAACAAAATTGTTCTTCGTaGACAGGTCAAATGACTGAT +
Preference number: 4 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKQNCSS*TGQMTD
Trigger: ATCAGTCATTTGACCTGTCCACGAAGAACAATTTTG...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCTTACTAACACAGCCCTaGGTGCTATTTCCAGATACT +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHILLTQP*VLFPDT
Trigger: AGTATCTGGAAATAGCACCCAGGGCTGTGTTAGTAA...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGCATCACCAGCTGGCTTaGGATGCAATAGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: MIAHKKLLRLTPSKNKKQHHQLA*DAIGQS
Trigger: AGACTGTCCTATTGCATCTCAAGCCAGCTGGTGATG...CTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTTCAAGCTCCTCACGGTaGTGGCGAAGCCCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGSSSSR*WRSPWF
Trigger: GAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGA...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCAAACGCCTTCTCGGCTaGATGGCTGTTGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVKRLLG*MAVGSQ
Trigger: CTGAGAGCCAACAGCCATTCAGCCGAGAAGGCGTTT...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGGCAGAGGCAAAGAATaGGCCCAGAGCCTGAGATTC +
Preference number: 4 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVGRGKE*AQSLRF
Trigger: GAATCTCAGGCTCTGGGCTCATTCTTTGCCTCTGCC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGATGCATGCTGATCTCATaGTTCTTCTCCGTGAACCGT +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRCMLIS*FFSVNR
Trigger: ACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCA...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTAGGTCCACTAGGGCGTaGTCACAGACACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGRSTRA*SQTRKA
Trigger: AGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGGGCATTTGTAAAGACTaGTTGCTTACCCTTTGTCTG +
Preference number: 4 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQGICKD*LLTLCL
Trigger: CAGACAAAGGGTAAGCAAGCAGTCTTTACAAATGCC...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGTTTAACCAGAAGCTGAGATaGAGCCGGCTGGGTTCAGAA +
Preference number: 4 (lower is better)
Translates to: IAHKKLLRLTPSKNKKQFNQKLR*SRLGSE
Trigger: TTCTGAACCCAGCCGGCTCCATCTCAGCTTCTGGTT...AAACTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTAAGGCGTCTCCTTCCTaGCAGCCTTTGGCACATGGA +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNIKASPS*QPLAHG
Trigger: TCCATGTGCCAAAGGCTGCCAGGAAGGAGACGCCTT...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATTTCCGTGGAGTAAAATaGGAGCAGACAGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDFRGVK*EQTGAR
Trigger: CCGGGCTCCTGTCTGCTCCCATTTTACTCCACGGAA...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCGACAGGTCAAAACCCTaGAGTATTTGGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIDRSKP*SIWFVF
Trigger: AAACACAAACCAAATACTCCAGGGTTTTGACCTGTC...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAAGGAGAGTGAAGAGCTaGATGGTGTTGATGATTAGC +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRRRVKS*MVLMIS
Trigger: GCTAATCATCAACACCATTCAGCTCTTCACTCTCCT...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCCTCAGCACCAAAGGATaGAAGGGGAACTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVLSTKG*KGNLSP
Trigger: AGGGGACAAGTTCCCCTTTCATCCTTTGGTGCTGAG...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGTGCACATTCAGGATGTaGCTTCAGCTTCATTCATCC +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRCTFRM*LQLHSS
Trigger: GGATGAATGAAGCTGAAGTCACATCCTGAATGTGCA...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGGCAAGTCTGGACCACTaGTTTAGAGAAAGCTGGATT +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRASLDH*FRESWI
Trigger: AATCCAGCTTTCTCTAAAGCAGTGGTCCAGACTTGC...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAGGATGTGAATTAGAGTaGTGGGATGTGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRGCELE*WDVLMP
Trigger: AGGCATTAGCACATCCCAGCACTCTAATTCACATCC...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGACCTGGAGAACAGCTTTaGTATTTCACTGGTAACTCC +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRPGEQL*YFTGNS
Trigger: GGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGG...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAATATTAAGCTCTATAAAGGCGTCTCCTTCCTaGCAGCCTTTGGCACATGGA +
Preference number: 4 (lower is better)
Translates to: KSKSNYSCVTLSRILSSIKASPS*QPLAHG
Trigger: TCCATGTGCCAAAGGCTGCCAGGAAGGAGACGCCTT...TATAGAGCTTAATATTCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CCA 90 bp CTCCTAACATACAAATCTGCATGGTATTTCTTTCCGTTTAGGACTCCCAGCAGTAATCAGAAAGCATGGTaGAGTCCGAAAGCATTGGCA +
Preference number: 4 (lower is better)
Translates to: LLTYKSAWYFFPFRTPSSNQKAW*SPKALA
Trigger: TGCCAATGCTTTCGGACTCCACCATGCTTTCTGATT...ACTGCTGGGAGTCCTAAACGGAAAGAAATACCATGCAGATTTGTATGTTAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGATGCTTACCCTTTGTCTaGCATGCACATTCAGGATGT +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRCLPFV*HAHSGC
Trigger: ACATCCTGAATGTGCATGCCAGACAAAGGGTAAGCA...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCTGTTTGGCAAAGATCTaGCTAAAACTAGTACTATGG +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHICLAKI*LKLVLW
Trigger: CCATAGTACTAGTTTTAGCCAGATCTTTGCCAAACA...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTTCTTGGCCAGGACCTTaGAGCCGGCTTGAGATGCAA +
Preference number: 4 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGSWPGP*SRLEMQ
Trigger: TTGCATCTCAAGCCGGCTCCAAGGTCCTGGCCAAGA...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
3UTR CAA 72 bp TGGACCACTGCTTTAGAGAAAGCTGGATTAAATCTCTaGAGCAGAAGTAGAGACCCTAGAGAATCTTCACTG +
Preference number: 4 (lower is better)
Translates to: WTTALEKAGLNL*SRSRDPRESSL
Trigger: CAGTGAAGATTCTCTAGGGTCTCTACTTCTGCTCAAGAGATTTAATCCAGCTTTCTCTAAAGCAGTGGTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp AAAGCCAGCACATCTGTGAGCATGTTACACATGGGCTaGCCTAAGTATTTCCTTCTCTGTGAACATCACTTA +
Preference number: 4 (lower is better)
Translates to: KASTSVSMLHMG*PKYFLLCEHHL
Trigger: TAAGTGATGTTCACAGAGAAGGAAATACTTAGGCAAGCCCATGTGTAACATGCTCACAGATGTGCTGGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAATATTAAGCTCTATATTAGAAACCAGAAGCTaGGATGGAGCCGGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: KSKSNYSCVTLSRILSSILETRS*DGAGWV
Trigger: AACCCAGCCGGCTCCATCTCAGCTTCTGGTTTCTAA...TATAGAGCTTAATATTCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp ATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGAGGAGAGTGAAGAGCTaGATGGTGTTGATGATTAGC +
Preference number: 4 (lower is better)
Translates to: MIAHKKLLRLTPSKNKKQRRVKS*MVLMIS
Trigger: GCTAATCATCAACACCATTCAGCTCTTCACTCTCCT...CTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGCATTTTATCAGGGGTaGCTTTGGCTGTCACTGCTG +
Preference number: 4 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVAFYQG*LWLSLL
Trigger: CAGCAGTGACAGCCAAAGTCACCCCTGATAAAATGC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGCGACAAGAAAATTTCTaGGCATTTTTGAGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQRQENF*AFLRVA
Trigger: TGCTACTCTCAAAAATGCTCAGAAATTTTCTTGTCG...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTACCTCTTATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATTCTGCAAGTTCTGAATaGCCAGGAGCAAAAAGACAA +
Preference number: 4 (lower is better)
Translates to: VPLMIAHKKLLRLTPSKNSASSE*PGAKRQ
Trigger: TTGTCTTTTTGCTCCTGGTCATTCAGAACTTGCAGA...ATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCATAAGAGGTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp ATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGGCAGGTAGCAATTGTTaGGTACCTCTTATGATTGCC +
Preference number: 4 (lower is better)
Translates to: MIAHKKLLRLTPSKNKKQAGSNC*VPLMIA
Trigger: GGCAATCATAAGAGGTACTCAACAATTGCTACCTGC...CTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR GCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTCTCCACGCACGTGCTTaGCATCTCTGCTCTCACAAA +
Preference number: 4 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGLHARA*HLCSHK
Trigger: TTTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAG...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCCTTCACTGGATACCTTaGTTCACACTTTGGTCAATA +
Preference number: 4 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLLHWIP*FTLWSI
Trigger: TATTGACCAAAGTGTGAAGCAAGGTATCCAGTGAAG...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGAGCCCCTCAAGAGACGTaGAAACCAAAGTATTTGTTT +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRAPQET*KPKYLF
Trigger: AAACAAATACTTTGGTTTGCACGTCTCTTGAGGGGC...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGGAGGTCCATGATGCGTaGACGCTCTTATTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: MIAHKKLLRLTPSKNKKQEVHDA*TLLFRN
Trigger: ATTTCTGAATAAGAGCGTCCACGCATCATGGACCTC...CTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CCA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCACATACAAATCTGCATaGTATTTCTTTCCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: GKHPSEMKPISCPHSHHITYKSA*YFFPFR
Trigger: CCTAAACGGAAAGAAATACCATGCAGATTTGTATGT...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAAGGCAATTCAAAACTTaGCGCTCACTTAGTTATTTC +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGRQFKT*RSLSYF
Trigger: GAAATAACTAAGTGAGCGCCAAGTTTTGAATTGCCT...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCGTCCAGGAGTACCCGTaGTTGTCTGTGTCATTAAGG +
Preference number: 4 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVVQEYP*LSVSLR
Trigger: CCTTAATGACACAGACAACCACGGGTACTCCTGGAC...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTGTCCAGGAGTACCCGTaGTTGTCTGTGTCATTAAGG +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNIVQEYP*LSVSLR
Trigger: CCTTAATGACACAGACAACCACGGGTACTCCTGGAC...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGAGACACAGGTGTGGTaGAGGCATTATGAGGGGACT +
Preference number: 4 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGETQVW*RHYEGT
Trigger: AGTCCCCTCATAATGCCTCCACCACACCTGTGTCTC...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp GCCATTGTGACAGGTCAAAACCCTGGAGTATTTGGTTaGTGTTTAAATGTACTTGACACTCTGGAAACACTC +
Preference number: 4 (lower is better)
Translates to: AIVTGQNPGVFG*CLNVLDTLETL
Trigger: GAGTGTTTCCAGAGTGTCAAGTACATTTAAACACAAACCAAATACTCCAGGGTTTTGACCTGTCACAATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTCATCACCAGCTGGCTTaGGATGCAATAGGACAGTCT +
Preference number: 4 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGHHQLA*DAIGQS
Trigger: AGACTGTCCTATTGCATCTCAAGCCAGCTGGTGATG...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR TCA 90 bp GTACCTCTTATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATTTTCAAACTTGTGGTTaGGAACCACGATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: VPLMIAHKKLLRLTPSKNFQTCG*EPRWHF
Trigger: AAAATGCCATCGTGGTTCTCAACCACAAGTTTGAAA...ATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCATAAGAGGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCCGACAAGAAAATTTCTaGGCATTTTTGAGAGTAGCA +
Preference number: 4 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLRQENF*AFLRVA
Trigger: TGCTACTCTCAAAAATGCTCAGAAATTTTCTTGTCG...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGGCTATTTCCAGATACTaGAAAGATCTAAGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRAISRY*KDLSRC
Trigger: GCACCTACTTAGATCTTTTCAGTATCTGGAAATAGC...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGAATGACTCTTACCCAGTaGAAAGCTTTACTAACACAG +
Preference number: 4 (lower is better)
Translates to: VISPKALFTLSLATKGYRMTLTQ*KALLTQ
Trigger: CTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCAT...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp ATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGTTCTTCTGCAAGTTCTaGATGACCAGGAGCAAAAAG +
Preference number: 4 (lower is better)
Translates to: MIAHKKLLRLTPSKNKKQFFCKF*MTRSKK
Trigger: CTTTTTGCTCCTGGTCATTCAGAACTTGCAGAAGAA...CTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR GCA 90 bp AAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAATATTAAGCTCTATAATCTTCCGGAAGAGCTaGTTGTTAATGGGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: KSKSNYSCVTLSRILSSIIFRKS*LLMGQR
Trigger: CCTCTGGCCCATTAACAAGCAGCTCTTCCGGAAGAT...TATAGAGCTTAATATTCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR GCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATCATCTCACAAATCACTaGAGAATGCCCAGGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDHLTNH*RMPRLY
Trigger: GTACAGCCTGGGCATTCTGCAGTGATTTGTGAGATG...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp ACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCCACTTTCTCACAGACACATACTaGTTAGAGAACTCGGTGTCG +
Preference number: 4 (lower is better)
Translates to: TYTTLLTARLIIKMKSHFLTDTY*LENSVS
Trigger: CGACACCGAGTTCTCTAAGCAGTATGTGTCTGTGAG...AAAGTGGGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CCA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAACATACAAATCTGCATaGTATTTCTTTCCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: YLWQPRVTENSAPKDERGTYKSA*YFFPFR
Trigger: CCTAAACGGAAAGAAATACCATGCAGATTTGTATGT...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGGACAGGTCAAAACCCTaGAGTATTTGGTTTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRDRSKP*SIWFVF
Trigger: AAACACAAACCAAATACTCCAGGGTTTTGACCTGTC...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ATATGGATGGGAGTGAAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAGAATCATATGTAAAATaGCCGGCAGGTAGCAATTGT +
Preference number: 4 (lower is better)
Translates to: IWMGVKSKSNYSCVTLSRESYVK*PAGSNC
Trigger: ACAATTGCTACCTGCCGGCCATTTTACATATGATTC...TCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTTCACTCCCATCCATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR TCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCAACTTTCCTTCCTCATaGTCTGCAAAGATACAGAGA +
Preference number: 4 (lower is better)
Translates to: KKSIESFSQIVRLLFSKANFPSS*SAKIQR
Trigger: TCTCTGTATCTTTGCAGATCATGAGGAAGGAAAGTT...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCCTTCACTGGATACCTTaGTTCACACTTTGGTCAATA +
Preference number: 4 (lower is better)
Translates to: KKSIESFSQIVRLLFSKALHWIP*FTLWSI
Trigger: TATTGACCAAAGTGTGAAGCAAGGTATCCAGTGAAG...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGATGCTTTAGAGAAAGCTaGATTAAATCTCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRCFRES*IKSLEQ
Trigger: CTGCTCAAGAGATTTAATCCAGCTTTCTCTAAAGCA...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTAAGATACAGAGAGAATaGCATTCCAAAATTCCATGG +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAKIQRE*HSKIPW
Trigger: CCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp CTTTTGACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCAAAGGAATTGTCCCTTaGTGTCTATTCACCACTCTG +
Preference number: 4 (lower is better)
Translates to: LLTYTTLLTARLIIKMKSKGIVP*CLFTTL
Trigger: CAGAGTGGTGAATAGACATCAAGGGACAATTCCTTT...GGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGTCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR TCA 90 bp CTTTTGACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCCCTAGCAAAATAGGCTaGTACAGAAAGGAATTGTCC +
Preference number: 4 (lower is better)
Translates to: LLTYTTLLTARLIIKMKSPSKIG*YRKELS
Trigger: GGACAATTCCTTTCTGTATCAGCCTATTTTGCTAGG...GGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGTCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR GCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTACCAGGTTCCCAGGCTaGATAACAAAATTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNITRFPG*ITKLFF
Trigger: GAAGAACAATTTTGTTATGCAGCCTGGGAACCTGGT...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATACCAGGTTCCCAGGCTaGATAACAAAATTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDTRFPG*ITKLFF
Trigger: GAAGAACAATTTTGTTATGCAGCCTGGGAACCTGGT...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGATTGTTTAGAGGATATTaGAGTCGAGATATTCCAGTA +
Preference number: 4 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRLFRGY*SRDIPV
Trigger: TACTGGAATATCTCGACTGCAATATCCTCTAAACAA...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGTTGTTTAGAGGATATTaGAGTCGAGATATTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QISLKVRIFLCHLELQNRLFRGY*SRDIPV
Trigger: TACTGGAATATCTCGACTGCAATATCCTCTAAACAA...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR GCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTTTCTGTCCAATACCTTaGTCTAATTCCAATTCATTC +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAFCPIP*SNSNSF
Trigger: GAATGAATTGGAATTAGAGCAAGGTATTGGACAGAA...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp ATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGTTTTCAATTTCAAACTTGTaGTTGAGAACCACGATGGCA +
Preference number: 4 (lower is better)
Translates to: IAHKKLLRLTPSKNKKQFSISNL*LRTTMA
Trigger: TGCCATCGTGGTTCTCAACCACAAGTTTGAAATTGA...AAACTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CCA 90 bp AAGAAGTCCATCGAGTCCTTCTCTCAAATTGTACGTCTGTTGTTTTCAAAAGCCTGCTTTAGAGAAAGCTaGATTAAATCTCTTGAGCAG +
Preference number: 4 (lower is better)
Translates to: KKSIESFSQIVRLLFSKACFRES*IKSLEQ
Trigger: CTGCTCAAGAGATTTAATCCAGCTTTCTCTAAAGCA...GGCTTTTGAAAACAACAGACGTACAATTTGAGAGAAGGACTCGATGGACTTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AAATTGTATGACTCTTACCCAGTGAAAAGCTTTACTAACACAGCCCTGGGTGCTCATTCCAAAATTCCATaGATGACTTTTCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: KLYDSYPVKSFTNTALGAHSKIP*MTFLNV
Trigger: GACATTCAGAAAAGTCATCCATGGAATTTTGGAATG...AGCACCCAGGGCTGTGTTAGTAAAGCTTTTCACTGGGTAAGAGTCATACAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTATCTTTGCTCTCTCCTaGCCATTACTGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: FLENSFAISLVTPKLQNIIFALS*PLLLAF
Trigger: AAAAGCAAGCAGTAATGGCCAGGAGAGAGCAAAGAT...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATATCTTTGCTCTCTCCTaGCCATTACTGCTTGCTTTT +
Preference number: 4 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDIFALS*PLLLAF
Trigger: AAAAGCAAGCAGTAATGGCCAGGAGAGAGCAAAGAT...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR TCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCCAGGCTGTACGTTCATaGTGTTTGTGTTCAATTTCA +
Preference number: 4 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVQAVRS*CLCSIS
Trigger: TGAAATTGAACACAAACATCATGAACGTACAGCCTG...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCCTAGAGAATCTTCACTaGATACCTTGCTTCACACTT +
Preference number: 4 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVLENLH*IPCFTL
Trigger: AAGTGTGAAGCAAGGTATCCAGTGAAGATTCTCTAG...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp AATAGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTTTACTAACACAGCCCTaGGTGCTATTTCCAGATACT +
Preference number: 4 (lower is better)
Translates to: NSSNFKQLNVVIDTMSVGLLTQP*VLFPDT
Trigger: AGTATCTGGAAATAGCACCCAGGGCTGTGTTAGTAA...ACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp TTCATTCGTTCTCATAACTTATTTGAAAAGGCACATTaGGTCAGTCTGATGTCATTCTTAGGGCATCTTTGC +
Preference number: 4 (lower is better)
Translates to: FIRSHNLFEKAH*VSLMSFLGHLC
Trigger: GCAAAGATGCCCTAAGAATGACATCAGACTGACCAAATGTGCCTTTTCAAATAAGTTATGAGAACGAATGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
3UTR CAA 72 bp ATTAGTTTTATCTTTGTTCAGCCCACCAACAAAAATTaGGAAAGATTGCTACACATGACAGAGCGACAGTAC +
Preference number: 4 (lower is better)
Translates to: ISFIFVQPTNKN*ERLLHMTERQY
Trigger: GTACTGTCGCTCTGTCATGTGTAGCAATCTTTCCAAATTTTTGTTGGTGGGCTGAACAAAGATAAAACTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CCA 90 bp CTTTTGACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCGACTCCCAGCAGTGTTaGATTTTCATTATTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LLTYTTLLTARLIIKMKSDSQQC*IFIISE
Trigger: TTCAGAAATAATGAAAATCCAACACTGCTGGGAGTC...GGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGTCAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR GCA 90 bp CTTTTGACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCCCTAACATACAAATCTaGATGGTATTTCTTTCCGTT +
Preference number: 4 (lower is better)
Translates to: LLTYTTLLTARLIIKMKSPNIQI*MVFLSV
Trigger: AACGGAAAGAAATACCATGCAGATTTGTATGTTAGG...GGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGTCAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CCA 90 bp CTTTTGACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCACATACAAATCTGCATaGTATTTCTTTCCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: LLTYTTLLTARLIIKMKSTYKSA*YFFPFR
Trigger: CCTAAACGGAAAGAAATACCATGCAGATTTGTATGT...GGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGTCAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS GCA 90 bp TCCCTGGGAGGGTACAGGCTGGCAGCTCCCATCCGCCCCAGCCAGTaGCTGCCATGTGCCTGCCCCACTCAGTCCTCTCCTGGCACCTGC +
Preference number: 5 (lower is better)
Translates to: SLGGYRLAAPIRPSQ*LPCACPTQSSPGTC
Trigger: GCAGGTGCCAGGAGAGGACTGAGTGGGGCAGGCACATGGCAGGCACTGGCTGGGGCGGATGGGAGCTGCCAGCCTGTACCCTCCCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATAGGCGAGGCAGCCCCTaGGCCCGGGCCACCTGCATG +
Preference number: 5 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNRRGSP*ARATCM
Trigger: CATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCT...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS GCA 90 bp TGGGAGGTCTCTCCCGGGTCCCGGTTACAGAAGCTTCATGGCTCCTaGCCCGGGCGCCCGCTCTCTCTCTCTTGCATGGCTCAACCTCAG +
Preference number: 5 (lower is better)
Translates to: WEVSPGSRLQKLHGS*PGRPLSLSCMAQPQ
Trigger: CTGAGGTTGAGCCATGCAAGAGAGAGAGAGCGGGCGCCCGGGGCAGGAGCCATGAAGCTTCTGTAACCGGGACCCGGGAGAGACCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp GCATGCGCTCCCACCTCCAGGATGGTAGTCGGTATGAACCCGCGGTaGAGCCATAGTCCCGTGAGCTGCCCACTTCCTGCCCTGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ACAPTSRMVVGMNPR*SHSPVSCPLPALAS
Trigger: ACTGGCCAGGGCAGGAAGTGGGCAGCTCACGGGACTATGGCTGCACCGCGGGTTCATACCGACTACCATCCTGGAGGTGGGAGCGCATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCAGGCGAGGCAGCCCCTaGGCCCGGGCCACCTGCATG +
Preference number: 5 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPRRGSP*ARATCM
Trigger: CATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCT...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAACCTCCCCATCCGGCCTaGAGACCAGACTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: LALSSTCQHSSAASAPCQPPHPA*RPDSLA
Trigger: AGCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGG...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp AGGGGAGGTGCGGTCCCTATGCTGCAGGTGGGATGGGCGTGCTGTTaGCTTGCTTTCCCGCCATCAGCGCTCCCGCCCTTATGCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RGGAVPMLQVGWACC*LAFPPSALPPLCSE
Trigger: CTCTGAGCATAAGGGCGGGAGCGCTGATGGCGGGAAAGCAAGTCAACAGCACGCCCATCCCACCTGCAGCATAGGGACCGCACCTCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CCCTTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCAGCTGAGGCCATGCCATaGCTACCCGGAAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PLLCARDTLRWSPRTCLPAEAMP*LPGSWL
Trigger: GAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGC...TGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp CGTCATGGGCCACAGCTCTCCAGTAGATGGCAAAGCTGTTCCCTGTaGCATGGGGAGGGGGTTCCCTGGGAGGGTACAGGCTGGCAGCTC +
Preference number: 5 (lower is better)
Translates to: RHGPQLSSRWQSCSL*HGEGVPWEGTGWQL
Trigger: GAGCTGCCAGCCTGTACCCTCCCAGGGAACCCCCTCCCCATGTCACAGGGAACAGCTTTGCCATCTACTGGAGAGCTGTGGCCCATGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp GTCCCTCCCTGCATGTGTTGTGGGGCTCACCTTCTCCCTCATCTGTaGCTGTCCCCGTGCCTGCTAGTGCTGGGCATCTGGGTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: VPPCMCCGAHLLPHL*LSPCLLVLGIWVLL
Trigger: GAGAAGCACCCAGATGCCCAGCACTAGCAGGCACGGGGACAGGCACAGATGAGGGAGAAGGTGAGCCCCACAACACATGCAGGGAGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp TCCCGTCTGGGGGCTATGTCCTCTCTCTGGACCTGGGTCCCTCCCTaGATGTGTTGTGGGGCTCACCTTCTCCCTCATCTGTGCCTGTCC +
Preference number: 5 (lower is better)
Translates to: SRLGAMSSLWTWVPP*MCCGAHLLPHLCLS
Trigger: GGACAGGCACAGATGAGGGAGAAGGTGAGCCCCACAACACATGCAGGGAGGGACCCAGGTCCAGAGAGAGGACATAGCCCCCAGACGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp ACTAAGAGGGCAAGGGAAGGTCTCAGACCAAATGTCATGTCACCGTaGGGTGGGCAGCCGCCAAGGGGCCCTGTGATCCTGGCCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TKRAREGLRPNVMSP*GGQPPRGPVILASW
Trigger: CCAGGAGGCCAGGATCACAGGGCCCCTTGGCGGCTGCCCACCCCACGGTGACATGACATTTGGTCTGAGACCTTCCCTTGCCCTCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp AGGCCCCTTCCCAGTTTCTCTTCTGAACGGACAGCCCAGCCCTTGTaGGATGGCGTTAGCCCCGCAGATGGGAAGGCAGAGCAGAGGCGT +
Preference number: 5 (lower is better)
Translates to: RPLPSFSSERTAQPL*DGVSPADGKAEQRR
Trigger: ACGCCTCTGCTCTGCCTTCCCATCTGCGGGGCTAACGCCATCCCACAAGGGCTGGGCTGTCCGTTCAGAAGAGAAACTGGGAAGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CCCTTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCACAGGGACACGCTTCGTaGGTCTCCACGCACGTGCTT +
Preference number: 5 (lower is better)
Translates to: PLLCARDTLRWSPRTCLPQGHAS*VSTHVL
Trigger: AAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTG...TGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCCTCCAAGGACCCCTCTaGCCTAAGGTCACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSLQGPL*PKVTSW
Trigger: CCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAG...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATGCTGAGGCCATGCCATaGCTACCCGGAAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDAEAMP*LPGSWL
Trigger: GAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGC...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CAACAGGTGATGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCCACCTGCATGCTGACCTTGGAGCCGGCTaGAGATGCAATAGGACAGTC +
Preference number: 5 (lower is better)
Translates to: QQVMLEARQPLGPGHLHADLGAG*RCNRTV
Trigger: GACTGTCCTATTGCATCTCAAGCCGGCTCCAAGGTC...AGCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS GCA 90 bp GTGCCTGCTAGTGCTGGGCATCTGGGTGCTTCTCCAGCATCTCTGTaGATGACCCTGCTCTGCCAGCTCCTGCAACTCCATCCCCAACCC +
Preference number: 5 (lower is better)
Translates to: VPASAGHLGASPASL*MTLLCQLLQLHPQP
Trigger: GGGTTGGGGATGGAGTTGCAGGAGCTGGCAGAGCAGGGTCATGCACAGAGATGCTGGAGAAGCACCCAGATGCCCAGCACTAGCAGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATCTGGTGGCAACCGTCTaGCGATCCTGCTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDLVATV*RSCSHL
Trigger: CAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAG...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCACAGTGAATAGGCGAGGCAGCCCCTaGGCCCGGGCCACCTGCATG +
Preference number: 5 (lower is better)
Translates to: LHADLMLLLREPCALTVNRRGSP*ARATCM
Trigger: CATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCT...ATTCACTGTGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CAA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGGGGCTCACCCAGCCTTaGTCACCGTGTCCCACTAAG +
Preference number: 5 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRGLTQP*SPCPTK
Trigger: CTTAGTGGGACACGGTGACAAAGGCTGGGTGAGCCC...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGTCGGTCCAAGTGCCATaGGTGTCTTGGCCTAAGATG +
Preference number: 5 (lower is better)
Translates to: LSAAPVSIARPLLPRAKASVQVP*VSWPKM
Trigger: CATCTTAGGCCAAGACACCAATGGCACTTGGACCGA...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCCTCCAAGGACCCCTCTaGCCTAAGGTCACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: CQGHASLVSTHVLAISALLQGPL*PKVTSW
Trigger: CCAGGACGTGACCTTAGGCAAGAGGGGTCCTTGGAG...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGTCGGCTGAATGGCTGTaGGCTCTCAGCAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: LQESPRIWPVTSGDDPALSAEWL*ALSSTC
Trigger: ACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCGA...CAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCGCTCCAGTTGTAGCCTaGGCACAGCTGAGGCCATGC +
Preference number: 5 (lower is better)
Translates to: CQGHASLVSTHVLAISALAPVVA*AQLRPC
Trigger: GCATGGCCTCAGCTGTGCCAAGGCTACAACTGGAGC...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS GCA 90 bp AGGTGCGGTCCCTATGCTGCAGGTGGGATGGGCGTGCTGTTGACTTaGTTTCCCGCCATCAGCGCTCCCGCCCTTATGCTCAGAGTTGTA +
Preference number: 5 (lower is better)
Translates to: RCGPYAAGGMGVLLT*FPAISAPALMLRVV
Trigger: TACAACTCTGAGCATAAGGGCGGGAGCGCTGATGGCGGGAAAGCAAGTCAACAGCACGCCCATCCCACCTGCAGCATAGGGACCGCACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp TCACGGTCACGGCTGTCAGGACACAAAGATGGGAGAGGAGCTCCCTaGACAAAGCCCTTGTCCACCCTGCCTGGACACAGGTCCTCAAGG +
Preference number: 5 (lower is better)
Translates to: SRSRLSGHKDGRGAP*TKPLSTLPGHRSSR
Trigger: CCTTGAGGACCTGTGTCCAGGCAGGGTGGACAAGGGCTTTGTGCAGGGAGCTCCTCTCCCATCTTTGTGTCCTGACAGCCGTGACCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp ATACTTCTCGGGGTAGTCCCGGAGGTGCTGCAAACTGGTGGCAACCGTCTTGCGCTGGTGGCAACCGTCTaGCGATCCTGCTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: ILLGVVPEVLQTGGNRLALVATV*RSCSHL
Trigger: CAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAG...CGCAAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACTACCCCGAGAAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CAA 90 bp ACACCGTGGAGCAATGTGGTGCACCTGCAGATGCCGCACTCAGCAGCCTGGAATGGGCTCACCCAGCCTTaGTCACCGTGTCCCACTAAG +
Preference number: 5 (lower is better)
Translates to: TPWSNVVHLQMPHSAAWNGLTQP*SPCPTK
Trigger: CTTAGTGGGACACGGTGACAAAGGCTGGGTGAGCCC...ATTCCAGGCTGCTGAGTGCGGCATCTGCAGGTGCACCACATTGCTCCACGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCCCCCTGAATGGTCCCTaGGCAGAGGCAAAGAATGAG +
Preference number: 5 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSPLNGP*AEAKNE
Trigger: CTCATTCTTTGCCTCTGCCAAGGGACCATTCAGGGG...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp TGCACACCACGGTTTGTTGGGCACCTTAGTGACCTGTGCCCCAGCTaGCTGCGTGTCACTCTCATCTCCAGGGAGGCAAGGTTCAGCGTG +
Preference number: 5 (lower is better)
Translates to: CTPRFVGHLSDLCPS*LRVTLISREARFSV
Trigger: CACGCTGAACCTTGCCTCCCTGGAGATGAGAGTGACACGCAGTCAGCTGGGGCACAGGTCACTAAGGTGCCCAACAAACCGTGGTGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 90 bp TGCTGCTCATGGTGTGCTTGCCAGGGCCTGGCGCTACCCAGACACTaGACGATCATGCTCTTATGCAACCAGCCGGGACCTGCTAAGGGA +
Preference number: 5 (lower is better)
Translates to: CCSWCACQGLALPRH*TIMLLCNQPGPAKG
Trigger: TCCCTTAGCAGGTCCCGGCTGGTTGCATAAGAGCATGATCGTTCAGTGTCTGGGTAGCGCCAGGCCCTGGCAAGCACACCATGAGCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp ATGTGTTGTGGGGCTCACCTTCTCCCTCATCTGTGCCTGTCCCCGTaGCTGCTAGTGCTGGGCATCTGGGTGCTTCTCCAGCATCTCTGT +
Preference number: 5 (lower is better)
Translates to: MCCGAHLLPHLCLSP*LLVLGIWVLLQHLC
Trigger: ACAGAGATGCTGGAGAAGCACCCAGATGCCCAGCACTAGCAGGCACGGGGACAGGCACAGATGAGGGAGAAGGTGAGCCCCACAACACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp CACCACGGTTTGTTGGGCACCTTAGTGACCTGTGCCCCAGCTGACTaGGTGTCACTCTCATCTCCAGGGAGGCAAGGTTCAGCGTGTGAC +
Preference number: 5 (lower is better)
Translates to: HHGLLGTLVTCAPAD*VSLSSPGRQGSACD
Trigger: GTCACACGCTGAACCTTGCCTCCCTGGAGATGAGAGTGACACGCAGTCAGCTGGGGCACAGGTCACTAAGGTGCCCAACAAACCGTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp AGAGGCAGCACAGGGCTTTATGGGCGCCCTCACGCACAGGCACTCTaGCTAGGAGGGATAATGCCACTCTCCTCCTCTCACCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: RGSTGLYGRPHAQAL*LGGIMPLSSSHLSL
Trigger: CAGAGAAAGGTGAGAGGAGGAGAGTGGCATTATCCCTCCTAGGCAGAGTGCCTGTGCGTGAGGGCGCCCATAAAGCCCTGTGCTGCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp GTGAATGTCTCTTCCCGTCTGGGGGCTATGTCCTCTCTCTGGACCTaGGTCCCTCCCTGCATGTGTTGTGGGGCTCACCTTCTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: VNVSSRLGAMSSLWT*VPPCMCCGAHLLPH
Trigger: ATGAGGGAGAAGGTGAGCCCCACAACACATGCAGGGAGGGACCCAGGTCCAGAGAGAGGACATAGCCCCCAGACGGGAAGAGACATTCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACTCTCCACGCACGTGCTaGCCATCTCTGCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHSPRTC*PSLLSQ
Trigger: TTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGA...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTATTATCAGGGGTGACTTaGGCTGTCACTGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLLSGVT*AVTAER
Trigger: CCTCTCAGCAGTGACAGCCAAAGTCACCCCTGATAA...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGATGTCGGCTCTGATTaGACCCTCATCAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: LALSSTCQHSSAASAPCQDVGSD*TLIRAG
Trigger: TCCTGCTCTGATGAGGGTCAAATCAGAGCCGACATC...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAAGGCGCAATTCAGAAGAAAATaGAATGTCTGTGGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LSAAPVSIARPLLPRAKAQFRRK*NVCGPP
Trigger: CGGGGGCCCACAGACATTCAATTTTCTTCTGAATTG...CGCCTTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TGTGGGCGGCCTGGGCCAGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCAGGAGTACCCGTGGTaGTCTGTGTCATTAAGGGCG +
Preference number: 5 (lower is better)
Translates to: CGRPGPALLCLPQMRVRKQEYPW*SVSLRA
Trigger: CGCCCTTAATGACACAGACAACCACGGGTACTCCTG...CTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCGCCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGCCTTGGCACAGCTGAGGCCATGCCATTGCTACCCGGAAGCTGGCTCTGCAGCTGGAGTCCGAAAGCATaGGCAAAGCCAGCACATCTG +
Preference number: 5 (lower is better)
Translates to: SLGTAEAMPLLPGSWLCSWSPKA*AKPAHL
Trigger: CAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCCA...GCTGCAGAGCCAGCTTCCGGGTAGCAATGGCATGGCCTCAGCTGTGCCAAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CCCTTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATGGAGTCCGAAAGCATaGGCAAAGCCAGCACATCTG +
Preference number: 5 (lower is better)
Translates to: PLLCARDTLRWSPRTCLPWSPKA*AKPAHL
Trigger: CAGATGTGCTGGCTTTGCCAATGCTTTCGGACTCCA...TGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCGCTCCAGTTGTAGCCTaGGCACAGCTGAGGCCATGC +
Preference number: 5 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPAPVVA*AQLRPC
Trigger: GCATGGCCTCAGCTGTGCCAAGGCTACAACTGGAGC...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp GAAGAAGACCCCGGTGTGTCCAACGTGGGACCGGACTTTTACAGATaGGCATGCGCTCCCACCTCCAGGATGGTAGTCGGTATGAACCCG +
Preference number: 5 (lower is better)
Translates to: EEDPGVSNVGPDFYR*ACAPTSRMVVGMNP
Trigger: CGGGTTCATACCGACTACCATCCTGGAGGTGGGAGCGCATGCTCATCTGTAAAAGTCCGGTCCCACGTTGGACACACCGGGGTCTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp TCTGTGCCTGCAGAGCTGATGAATTCACATGGTGGCGGGCAGCACTaGGTATCTGCCATAGGCTCAGGTGATGCCAGCAGTGAGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SVPAELMNSHGGGQH*VSAIGSGDASSEQG
Trigger: ACCCTGCTCACTGCTGGCATCACCTGAGCCTATGGCAGATACCCAGTGCTGCCCGCCACCATGTGAATTCATCAGCTCTGCAGGCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCTTCCGGAAGAGCTGCTaGTTAATGGGCCAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: RSTRACSQTRKATHHAHLFRKSC*LMGQRR
Trigger: CCTCCTCTGGCCCATTAACAAGCAGCTCTTCCGGAA...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCCCTCCCCATCCGGCCTaGAGACCAGACTCCCTGGCT +
Preference number: 5 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGPPHPA*RPDSLA
Trigger: AGCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGG...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACAAGCCTGGGGGTTTTTaGTACATGGGATGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYKPGGF*YMGCRL
Trigger: GAGCCGACATCCCATGTACAAAAAACCCCCAGGCTT...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCCAGGAGTACCCGTGGTaGTCTGTGTCATTAAGGGCG +
Preference number: 5 (lower is better)
Translates to: RSTRACSQTRKATHHAHLQEYPW*SVSLRA
Trigger: CGCCCTTAATGACACAGACAACCACGGGTACTCCTG...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGTCGGCTGAATGGCTGTaGGCTCTCAGCAGCACCTGT +
Preference number: 5 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWSAEWL*ALSSTC
Trigger: ACAGGTGCTGCTGAGAGCCAACAGCCATTCAGCCGA...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GAGAAAGAGGTCCAGATCTCTCCCCAGCACGCCACATTCTCTTTCGGCTCTAAGCGGCCTGGGCCAGCCTaGCTGTGTTTGCCTCAGATG +
Preference number: 5 (lower is better)
Translates to: EKEVQISPQHATFSFGSKRPGPA*LCLPQM
Trigger: CATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCG...CTTAGAGCCGAAAGAGAATGTGGCGTGCTGGGGAGAGATCTGGACCTCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp TACCAAGTCGGTGTACAGCAGACAGCACAGGCTGTGACCGTTTGCTaGGGGCTGCGCACAGAGGAGGAGGAAGCCCCAAGCTTTCAACAA +
Preference number: 5 (lower is better)
Translates to: YQVGVQQTAQAVTVC*GLRTEEEEAPSFQQ
Trigger: TTGTTGAAAGCTTGGGGCTTCCTCCTCCTCTGTGCGCAGCCCTCAGCAAACGGTCACAGCCTGTGCTGTCTGCTGTACACCGACTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp GACCGTGCAGGCTTGAAGCAGCAGGATACTGATCACTACTGGCTCTaGTTTGAGGGGTCACGGTCACGGCTGTCAGGACACAAAGATGGG +
Preference number: 5 (lower is better)
Translates to: DRAGLKQQDTDHYWL*FEGSRSRLSGHKDG
Trigger: CCCATCTTTGTGTCCTGACAGCCGTGACCGTGACCCCTCAAAGCAGAGCCAGTAGTGATCAGTATCCTGCTGCTTCAAGCCTGCACGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp GCCACCAAGGGGCAAGCAGGGATTGGAAGGCACCCCCAAGTTCAATaGGCCTTCTGCTCTACCTCAGAGACTCCTGGTCCACGAATTATG +
Preference number: 5 (lower is better)
Translates to: ATKGQAGIGRHPQVQ*AFCSTSETPGPRIM
Trigger: CATAATTCGTGGACCAGGAGTCTCTGAGGTAGAGCAGAAGGCCCATTGAACTTGGGGGTGCCTTCCAATCCCTGCTTGCCCCTTGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp TTTATCCACGTGGGACAGAGTACGCGGGGTTCTTGCACTCCTGACTaGCCTCCTCCAGCCAACTTCCCTCTGTTTACCAGGCCCCAAACT +
Preference number: 5 (lower is better)
Translates to: FIHVGQSTRGSCTPD*PPPANFPLFTRPQT
Trigger: AGTTTGGGGCCTGGTAAACAGAGGGAAGTTGGCTGGAGGAGGCCAGTCAGGAGTGCAAGAACCCCGCGTACTCTGTCCCACGTGGATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CAGCCAGGCCGAGCACTCGTCATCGTCTTCAGGGATGTCTTCCAGTGGGATCCTCCTTCCTGGCAGCCTTaGGCACATGGACTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: QPGRALVIVFRDVFQWDPPSWQP*AHGLRN
Trigger: GTTTCTAAGTCCATGTGCCAAAGGCTGCCAGGAAGG...AGGATCCCACTGGAAGACATCCCTGAAGACGATGACGAGTGCTCGGCCTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CAA 90 bp CAACAGGTGATGCTTGAGGCGAGGCAGCCCCTTGGCCCGGGCCACCTGCATGCTATGTGTGGCCAGTTTTaGTATAGAGCTGTTCATTCC +
Preference number: 5 (lower is better)
Translates to: QQVMLEARQPLGPGHLHAMCGQF*YRAVHS
Trigger: GGAATGAACAGCTCTATACAAAAACTGGCCACACAT...AGCATGCAGGTGGCCCGGGCCAAGGGGCTGCCTCGCCTCAAGCATCACCTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CAA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACTGGGAACCAAAGCAGTaGTTGTGTGCTGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYWEPKQ*LCAEEM
Trigger: CATCTCCTCAGCACACAACAACTGCTTTGGTTCCCA...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGTTTTCAGCAGCTGGCTaGAAGCCCCTGAATGGTCCC +
Preference number: 5 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWFSAAG*KPLNGP
Trigger: GGGACCATTCAGGGGCTTCAAGCCAGCTGCTGAAAA...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCTGCTTGCTTACCCTTaGTCTGGCATGCACATTCAG +
Preference number: 5 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHLLAYP*SGMHIQ
Trigger: CTGAATGTGCATGCCAGACAAAGGGTAAGCAAGCAG...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp CCTCATCCATGTGATTCCAGATCCCAGCACACTTGCCAAACCCAGTaGATGGTAAGAGGCAGAGGGTGGCGTCCCAGCCCATTCCTAGTG +
Preference number: 5 (lower is better)
Translates to: PHPCDSRSQHTCQTQ*MVRGRGWRPSPFLV
Trigger: CACTAGGAATGGGCTGGGACGCCACCCTCTGCCTCTTACCATTCACTGGGTTTGGCAAGTGTGCTGGGATCTGGAATCACATGGATGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 90 bp ACAGGCATGCAGATGTGCGGAGAGGAGAAGAGGACCGTGCAGGCTTaGAGCAGCAGGATACTGATCACTACTGGCTCTGCTTTGAGGGGT +
Preference number: 5 (lower is better)
Translates to: TGMQMCGEEKRTVQA*SSRILITTGSALRG
Trigger: ACCCCTCAAAGCAGAGCCAGTAGTGATCAGTATCCTGCTGCTTCAAGCCTGCACGGTCCTCTTCTCCTCTCCGCACATCTGCATGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 90 bp CAGCCAACTTCCCTCTGTTTACCAGGCCCCAAACTATTCTGGGTTTaGCAGGCATGCAGATGTGCGGAGAGGAGAAGAGGACCGTGCAGG +
Preference number: 5 (lower is better)
Translates to: QPTSLCLPGPKLFWV*QACRCAERRRGPCR
Trigger: CCTGCACGGTCCTCTTCTCCTCTCCGCACATCTGCATGCCTGTCAAACCCAGAATAGTTTGGGGCCTGGTAAACAGAGGGAAGTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp GGTGTGCTTGCCAGGGCCTGGCGCTACCCAGACACTGAACGATCATaGTCTTATGCAACCAGCCGGGACCTGCTAAGGGAAAAAGATAAG +
Preference number: 5 (lower is better)
Translates to: GVLARAWRYPDTERS*SYATSRDLLREKDK
Trigger: CTTATCTTTTTCCCTTAGCAGGTCCCGGCTGGTTGCATAAGAGCATGATCGTTCAGTGTCTGGGTAGCGCCAGGCCCTGGCAAGCACACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp AGCGATTGGCCTCGCCCAGCACCCCAGCACCCTATAGATAATAGGTaGTTGCTAAACAGTTGCAGGAAGCACAGGCAGATGGGGCATCAG +
Preference number: 5 (lower is better)
Translates to: SDWPRPAPQHPIDNR*LLNSCRKHRQMGHQ
Trigger: CTGATGCCCCATCTGCCTGTGCTTCCTGCAACTGTTTAGCAAGCACCTATTATCTATAGGGTGCTGGGGTGCTGGGCGAGGCCAATCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp GGAGCCCCCGAAGACTCTAATCCTAAGCACAGTCTCCACCATCAGTaGCAGGGCGCAGACCCCCTTACACACAGCATTAGTTGTTTGGGT +
Preference number: 5 (lower is better)
Translates to: GAPEDSNPKHSLHHQ*QGADPLTHSISCLG
Trigger: ACCCAAACAACTAATGCTGTGTGTAAGGGGGTCTGCGCCCTGCCACTGATGGTGGAGACTGTGCTTAGGATTAGAGTCTTCGGGGGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp AGAGGATCCTGGTCAACAAAGAAGAAGACCCCGGTGTGTCCAACGTaGGACCGGACTTTTACAGATGAGCATGCGCTCCCACCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: RGSWSTKKKTPVCPT*DRTFTDEHALPPPG
Trigger: TCCTGGAGGTGGGAGCGCATGCTCATCTGTAAAAGTCCGGTCCCACGTTGGACACACCGGGGTCTTCTTCTTTGTTGACCAGGATCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp GGTGGGATCAGACTCTGGCTTGTTAAAGACACTGCCAGAGGATCCTaGTCAACAAAGAAGAAGACCCCGGTGTGTCCAACGTGGGACCGG +
Preference number: 5 (lower is better)
Translates to: GGIRLWLVKDTARGS*STKKKTPVCPTWDR
Trigger: CCGGTCCCACGTTGGACACACCGGGGTCTTCTTCTTTGTTGACCAGGATCCTCTGGCAGTGTCTTTAACAAGCCAGAGTCTGATCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp GAAGAGGACCGTGCAGGCTTGAAGCAGCAGGATACTGATCACTACTaGCTCTGCTTTGAGGGGTCACGGTCACGGCTGTCAGGACACAAA +
Preference number: 5 (lower is better)
Translates to: EEDRAGLKQQDTDHY*LCFEGSRSRLSGHK
Trigger: TTTGTGTCCTGACAGCCGTGACCGTGACCCCTCAAAGCAGAGCCAGTAGTGATCAGTATCCTGCTGCTTCAAGCCTGCACGGTCCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAATTCTTGGCCAGGACCTaGGAGCCCCCTAACAGCCCA +
Preference number: 5 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKFLART*EPPNSP
Trigger: TGGGCTGTTAGGGGGCTCCAAGGTCCTGGCCAAGAA...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR CAA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGGATGTCGGCTCTGATTaGACCCTCATCAGAGCAGGA +
Preference number: 5 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRDVGSD*TLIRAG
Trigger: TCCTGCTCTGATGAGGGTCAAATCAGAGCCGACATC...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CCCCTTGGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGCTGTCTTGTAACTCCTaGGCTTACCTAGTTTGGTTG +
Preference number: 5 (lower is better)
Translates to: PLGPGHLHADLMLLLREPLSCNS*AYLVWL
Trigger: CAACCAAACTAGGTAAGCCAAGGAGTTACAAGACAG...CGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CAA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCAATTCAGAAGAAAATaGAATGTCTGTGGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHQFRRK*NVCGPP
Trigger: CGGGGGCCCACAGACATTCAATTTTCTTCTGAATTG...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCTACTCCACAGGACCTaGGAGAGTTGCATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRLLHRT*ESCILG
Trigger: CCCCAAAATGCAACTCTCCAAGGTCCTGTGGAGTAG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CCCGTGGTTGTCTGTGTCATTAAGGGCGCAGGGTGTAAGGAAACCAGGTTCCCACCCCTGAATGGTCCCTaGGCAGAGGCAAAGAATGAG +
Preference number: 5 (lower is better)
Translates to: PVVVCVIKGAGCKETRFPPLNGP*AEAKNE
Trigger: CTCATTCTTTGCCTCTGCCAAGGGACCATTCAGGGG...TGGGAACCTGGTTTCCTTACACCCTGCGCCCTTAATGACACAGACAACCACGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS GCA 90 bp GAAGCACTGGCTCCCAGGAGAACCAGAGCCTCTGGGGACAGGCACTaGAATGAGCAGTGGCCTCATGGGATCTTGAGTACATTTAAAAGG +
Preference number: 5 (lower is better)
Translates to: EALAPRRTRASGDRH*NEQWPHGILSTFKR
Trigger: CCTTTTAAATGTACTCAAGATCCCATGAGGCCACTGCTCATTGCAGTGCCTGTCCCCAGAGGCTCTGGTTCTCCTGGGAGCCAGTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp CCAGCACCCCAGCACCCTATAGATAATAGGTGCTTGCTAAACAGTTaGAGGAAGCACAGGCAGATGGGGCATCAGAGGGCCCTAAGCACA +
Preference number: 5 (lower is better)
Translates to: PAPQHPIDNRCLLNS*RKHRQMGHQRALST
Trigger: TGTGCTTAGGGCCCTCTGATGCCCCATCTGCCTGTGCTTCCTGCAACTGTTTAGCAAGCACCTATTATCTATAGGGTGCTGGGGTGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp GGAATTAGAGACTTTATCCACGTGGGACAGAGTACGCGGGGTTCTTaGACTCCTGACTGGCCTCCTCCAGCCAACTTCCCTCTGTTTACC +
Preference number: 5 (lower is better)
Translates to: GIRDFIHVGQSTRGS*TPDWPPPANFPLFT
Trigger: GGTAAACAGAGGGAAGTTGGCTGGAGGAGGCCAGTCAGGAGTGCAAGAACCCCGCGTACTCTGTCCCACGTGGATAAAGTCTCTAATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp CGAGCCAGGAAGGTATTAGAAGCCTGGTCCTTACTGCAGCTGGTCTaGGTCGTTTTAGGATGGTCAGGGTCCTGTTTCTGGAGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RARKVLEAWSLLQLV*VVLGWSGSCFWSRS
Trigger: AGACCTGCTCCAGAAACAGGACCCTGACCATCCTAAAACGACCCAGACCAGCTGCAGTAAGGACCAGGCTTCTAATACCTTCCTGGCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCCGATCCTGCTCCCACTaGCGCGAACAGAAGACCATC +
Preference number: 5 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGRSCSH*REQKTI
Trigger: GATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCG...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGTGTGCCCTCACAGTGAATCGATCCTGCTCCCACTaGCGCGAACAGAAGACCATC +
Preference number: 5 (lower is better)
Translates to: LHADLMLLLREPCALTVNRSCSH*REQKTI
Trigger: GATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCG...ATTCACTGTGAGGGCACACGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CAA 90 bp CCCTTGCTGTGTGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCAATGTGTGGCCAGTTTTaGTATAGAGCTGTTCATTCC +
Preference number: 5 (lower is better)
Translates to: PLLCARDTLRWSPRTCLPMCGQF*YRAVHS
Trigger: GGAATGAACAGCTCTATACAAAAACTGGCCACACAT...TGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCACACAGCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCACAGAGGCTGCATAACAAAATaGTTCTTCGTGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: HGQGQDGGAAVHVNIHHRGCITK*FFVDRS
Trigger: TGACCTGTCCACGAAGAACAATTTTGTTATGCAGCC...TCTGTGGTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CTGCTCTCACAAATGCTCACGGGCTCCTGGACCTGTGTCTCCTGCCAGGAGCTGGCTGGATTAAATCTCTaGAGCAGAAGTAGAGACCCT +
Preference number: 5 (lower is better)
Translates to: LLSQMLTGSWTCVSCQELAGLNL*SRSRDP
Trigger: AGGGTCTCTACTTCTGCTCAAGAGATTTAATCCAGC...CAGCTCCTGGCAGGAGACACAGGTCCAGGAGCCCGTGAGCATTTGTGAGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGGGGTTAGGGCCCGTCTaGCTTTCATGTTCTTTTAAA +
Preference number: 5 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRGLGPV*LSCSFK
Trigger: TTTAAAAGAACATGAAAGCAAGACGGGCCCTAACCC...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GCATCACGGACCCCTCCGAGAGACTGGCCCGATAATCCAGGCGCAGGTCCACTAATGTTACACATGGGCTaGCCTAAGTATTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: ASRTPPRDWPDNPGAGPLMLHMG*PKYFLL
Trigger: GAGAAGGAAATACTTAGGCAAGCCCATGTGTAACAT...TAGTGGACCTGCGCCTGGATTATCGGGCCAGTCTCTCGGAGGGGTCCGTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp CGCCTGCTACCTCGGTCGTCACCATTATCGGGTTCCTCATCCATGTaGTTCCAGATCCCAGCACACTTGCCAAACCCAGTGAATGGTAAG +
Preference number: 5 (lower is better)
Translates to: RLLPRSSPLSGSSSM*FQIPAHLPNPVNGK
Trigger: CTTACCATTCACTGGGTTTGGCAAGTGTGCTGGGATCTGGAATCACATGGATGAGGAACCCGATAATGGTGACGACCGAGGTAGCAGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 90 bp CACAGAGGAGGAGGAAGCCCCAAGCTTTCAACAACCCTGGCTTTATaGGCGGTGGGATCAGACTCTGGCTTGTTAAAGACACTGCCAGAG +
Preference number: 5 (lower is better)
Translates to: HRGGGSPKLSTTLAL*AVGSDSGLLKTLPE
Trigger: CTCTGGCAGTGTCTTTAACAAGCCAGAGTCTGATCCCACCGCTCATAAAGCCAGGGTTGTTGAAAGCTTGGGGCTTCCTCCTCCTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 90 bp GGGCAAGCAGGGATTGGAAGGCACCCCCAAGTTCAATGGGCCTTCTaGTCTACCTCAGAGACTCCTGGTCCACGAATTATGAATGTTTGC +
Preference number: 5 (lower is better)
Translates to: GQAGIGRHPQVQWAF*STSETPGPRIMNVC
Trigger: GCAAACATTCATAATTCGTGGACCAGGAGTCTCTGAGGTAGAGCAGAAGGCCCATTGAACTTGGGGGTGCCTTCCAATCCCTGCTTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTCGATCCTGCTCCCACTaGCGCGAACAGAAGACCATC +
Preference number: 5 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVRSCSH*REQKTI
Trigger: GATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCG...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGTCGGTCCAAGTGCCATaGGTGTCTTGGCCTAAGATG +
Preference number: 5 (lower is better)
Translates to: YISQAPHGDGEALGSWQQSVQVP*VSWPKM
Trigger: CATCTTAGGCCAAGACACCAATGGCACTTGGACCGA...CTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CAA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAACCCATTCTGTTTTGCTaGGGGACCAGCCAGACCACT +
Preference number: 5 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKPILFC*GTSQTT
Trigger: AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGG...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCGAAGCCCATTCTGTTTaGCTTGGGGACCAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGEAHSV*LGDQPD
Trigger: GTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTC...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTAGGCACTGTGCTGGCTaGGGGGATCCTGTGATGACT +
Preference number: 5 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVRHCAG*GDPVMT
Trigger: AGTCATCACAGGATCCCCCAAGCCAGCACAGTGCCT...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAATCGATACTATGTCAGTaGGTGATGAATGCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: LALSSTCQHSSAASAPCQSILCQ*VMNAVN
Trigger: ATTCACAGCATTCATCACCAACTGACATAGTATCGA...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTGGCTCTCAGCAGCACCTGTCAGCATAGCTCGGCCGCTTCTGCCCCGTGCCAACCCACCAACAAAAATTaGGAAAGATTGCTACACATG +
Preference number: 5 (lower is better)
Translates to: LALSSTCQHSSAASAPCQPTNKN*ERLLHM
Trigger: CATGTGTAGCAATCTTTCCAAATTTTTGTTGGTGGG...TTGGCACGGGGCAGAAGCGGCCGAGCTATGCTGACAGGTGCTGCTGAGAGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp CCTACGGAATACCTGAGTACCGCAGATGACTCTGATTCAGCTATGTaGCACAGGCTCAACCGCTACACGCTGCAGTGTGTTGAAGACGAC +
Preference number: 5 (lower is better)
Translates to: PTEYLSTADDSDSAM*HRLNRYTLQCVEDD
Trigger: GTCGTCTTCAACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCACATAGCTGAATCAGAGTCATCTGCGGTACTCAGGTATTCCGTAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp AGTCCCGGAGGTGCTGCAAACTGGTGGCAACCGTCTTGCGATCCTGCTCCCACTATTTCAAACTTGTGGTaGAGAACCACGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: SPGGAANWWQPSCDPAPTISNLW*RTTMAF
Trigger: AAATGCCATCGTGGTTCTCAACCACAAGTTTGAAAT...AGTGGGAGCAGGATCGCAAGACGGTTGCCACCAGTTTGCAGCACCTCCGGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CAA 90 bp TGGCTTGGGGGATCCTGTGATGACTGGAACCTGGGCCTTCATTACGGGCTCCGGAAGTCAATTTCAAACTaGTGGTTGAGAACCACGATG +
Preference number: 5 (lower is better)
Translates to: WLGGSCDDWNLGLHYGLRKSISN*WLRTTM
Trigger: CATCGTGGTTCTCAACCACAAGTTTGAAATTGACTT...CCGGAGCCCGTAATGAAGGCCCAGGTTCCAGTCATCACAGGATCCCCCAAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR CAA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACAGGGACACGCTTCGTaGGTCTCCACGCACGTGCTT +
Preference number: 5 (lower is better)
Translates to: YLWQPRVTENSAPKDERGQGHAS*VSTHVL
Trigger: AAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTCCCATTCTGTTTTGCTaGGGGACCAGCCAGACCACT +
Preference number: 5 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVPILFC*GTSQTT
Trigger: AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGG...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGGTCCACTAGGGCGTGCTCACAGACACGCAAGGCTACACACCATGCACACCTCTCTTCACTGGATACCTaGCTTCACACTTTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: RSTRACSQTRKATHHAHLSSLDT*LHTLVN
Trigger: ATTGACCAAAGTGTGAAGCAAGGTATCCAGTGAAGA...GAGGTGTGCATGGTGTGTAGCCTTGCGTGTCTGTGAGCACGCCCTAGTGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CCCCTTGGCCCGGGCCACCTGCATGCTGATCTCATGCTTCTTCTCCGTGAACCGCAAATTGTACGTCTGTaGTTTTCAAAAGCCATTGTG +
Preference number: 5 (lower is better)
Translates to: PLGPGHLHADLMLLLREPQIVRL*FSKAIV
Trigger: CACAATGGCTTTTGAAAACAACAGACGTACAATTTG...CGGTTCACGGAGAAGAAGCATGAGATCAGCATGCAGGTGGCCCGGGCCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CAA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACCTGAAAAGTCATCCATaGAATGGTCTGTTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYLKSHP*NGLFLN
Trigger: ATTCAGGAACAGACCATTCAATGGATGACTTTTCAG...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCTTTGAAAAGGCACATTaGGTCAGTCTGATGTCATTC +
Preference number: 5 (lower is better)
Translates to: CQGHASLVSTHVLAISALFEKAH*VSLMSF
Trigger: GAATGACATCAGACTGACCAAATGTGCCTTTTCAAA...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACACCCCACCAACAAAAATTaGGAAAGATTGCTACACATG +
Preference number: 5 (lower is better)
Translates to: QSHGQGQDGGAAVHVNIHPTNKN*ERLLHM
Trigger: CATGTGTAGCAATCTTTCCAAATTTTTGTTGGTGGG...GTGTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AAATCCCACTTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTATGCACCACTTCCACTaGCTGCTCAGCGATCTTCTC +
Preference number: 5 (lower is better)
Translates to: KSHFDKLGRAPRFGARKAMHHFH*LLSDLL
Trigger: GAGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCAT...AGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAAGTGGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CAA 90 bp ACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGGACACGCTGCAGTGTGTaGAAGACGACAAAAGTCAAC +
Preference number: 5 (lower is better)
Translates to: TFLKLLTVMAKPLVRGNRTRCSV*KTTKVN
Trigger: GTTGACTTTTGTCGTCTTCAACACACTGCAGCGTGT...CCTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CAA 90 bp CTATGTGACACAGGCTCAACCGCTACACGCTGCAGTGTGTTGAAGACGACAAAAGCATCACCAGCTGGCTaGAGATGCAATAGGACAGTC +
Preference number: 5 (lower is better)
Translates to: LCDTGSTATRCSVLKTTKASPAG*RCNRTV
Trigger: GACTGTCCTATTGCATCTCAAGCCAGCTGGTGATGC...TTTTGTCGTCTTCAACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCACATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CAA 90 bp GTGGCAACCGTCTTGCGATCCTGCTCCCACTTGCGCGAACAGAAGACCATCTCGAAGTCAATTTCAAACTaGTGGTTGAGAACCACGATG +
Preference number: 5 (lower is better)
Translates to: VATVLRSCSHLREQKTISKSISN*WLRTTM
Trigger: CATCGTGGTTCTCAACCACAAGTTTGAAATTGACTT...CGAGATGGTCTTCTGTTCGCGCAAGTGGGAGCAGGATCGCAAGACGGTTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000436279.1
CDS-3UTR CAA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAACATTTTTGGCACCTGTaGGCTGACAGCAGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKHFWHL*ADSSLQ
Trigger: TTGCAGACTGCTGTCAGCCAACAGGTGCCAAAAATG...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGCTGTCTTGTAACTCCTaGGCTTACCTAGTTTGGTTG +
Preference number: 5 (lower is better)
Translates to: FPASISCRSRLGYGPSRLLSCNS*AYLVWL
Trigger: CAACCAAACTAGGTAAGCCAAGGAGTTACAAGACAG...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTGAACCAAAGCAGTTGTaGTGTGCTGAGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTEPKQL*CAEEMV
Trigger: CACCATCTCCTCAGCACACAACAACTGCTTTGGTTC...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp ACCAAAGCCACGGGCAAGGGCAGGATGGAGGGGCAGCGGTCCATGTCAACATACCCTGGAGTATTTGGTTaGTGTTTAAATGTACTTGAC +
Preference number: 5 (lower is better)
Translates to: TKATGKGRMEGQRSMSTYPGVFG*CLNVLD
Trigger: GTCAAGTACATTTAAACACAAACCAAATACTCCAGG...GTATGTTGACATGGACCGCTGCCCCTCCATCCTGCCCTTGCCCGTGGCTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TGCCAGGGACACGCTTCGTTGGTCTCCACGCACGTGCTTGCCATCTCTGCTCTCAGTCCTTCTCTCAAATaGTACGTCTGTTGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: CQGHASLVSTHVLAISALSPSLK*YVCCFQ
Trigger: TTGAAAACAACAGACGTACAATTTGAGAGAAGGACT...GAGAGCAGAGATGGCAAGCACGTGCGTGGAGACCAACGAAGCGTGTCCCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CAGCCTTTGTCACCGTGTCCCACTAAGGAGGATATGCAGAGGCCACCAGTTCCCGCAGCAATCTTAACTTaGTGTACATACCACTCACCT +
Preference number: 5 (lower is better)
Translates to: QPLSPCPTKEDMQRPPVPAAILT*CTYHSP
Trigger: AGGTGAGTGGTATGTACACAAAGTTAAGATTGCTGC...GGGAACTGGTGGCCTCTGCATATCCTCCTTAGTGGGACACGGTGACAAAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGCGGCCTGGGCCAGCCTaGCTGTGTTTGCCTCAGATG +
Preference number: 5 (lower is better)
Translates to: QISLKVRIFLCHLELQNRRPGPA*LCLPQM
Trigger: CATCTGAGGCAAACACAGCAAGGCTGGCCCAGGCCG...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGATTCTTAGGGCATCTTaGCTCTCTCCTGGCCATTAC +
Preference number: 5 (lower is better)
Translates to: YISQAPHGDGEALGSWQQILRAS*LSPGHY
Trigger: GTAATGGCCAGGAGAGAGCAAAGATGCCCTAAGAAT...CTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CAA 90 bp CGCCTAGGATATGGCCCGTCACGTCTGGGGATGACCCTGCACTGCTCTCCAGATAAAAATTTGGAAAGATaGCTACACATGACAGAGCGA +
Preference number: 5 (lower is better)
Translates to: RLGYGPSRLGMTLHCSPDKNLER*LHMTER
Trigger: TCGCTCTGTCATGTGTAGCAATCTTTCCAAATTTTT...ATCTGGAGAGCAGTGCAGGGTCATCCCCAGACGTGACGGGCCATATCCTAGGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp CTCCTTCCTGGCAGCCTTTGGCACATGGACTTAGAAACCAGAAGCTaGGATGGAGCCGGCTGGGTTCAGAAATTGCCACTAGTTTATAAG +
Preference number: 5 (lower is better)
Translates to: LLPGSLWHMDLETRS*DGAGWVQKLPLVYK
Trigger: CTTATAAACTAGTGGCAATTTCTGAACCCAGCCGGCTCCATCTCAGCTTCTGGTTTCTAAGTCCATGTGCCAAAGGCTGCCAGGAAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366905.3
CDS TCA 90 bp TCAACCGCTACACGCTGCAGTGTGTTGAAGACGACAAAAGTCAACTaGAGAGACCCAGTTCCAAAGGCATGCAAGCTACGTGCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: STATRCSVLKTTKVN*RDPVPKACKLRARG
Trigger: ACCTCTTGCACGTAGCTTGCATGCCTTTGGAACTGGGTCTCTTCAGTTGACTTTTGTCGTCTTCAACACACTGCAGCGTGTAGCGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436279.1
ENST00000624499.2
CDS GCA 90 bp GAATTGTCCCTTGATGTCTATTCACCACTCTGCTTGGAGAAACCATaGACCACTTCCACTTGCTGCTCAGCGATCTTCTCGGAAGGGCAA +
Preference number: 5 (lower is better)
Translates to: ELSLDVYSPLCLEKP*TTSTCCSAIFSEGQ
Trigger: TTGCCCTTCCGAGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAGTGGTGAATAGACATCAAGGGACAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS GCA 90 bp CTCTCCTGGCACCTGCTCTCTCTAGCTCCTTGCTTTGTGAGAATGTaGATAACAATGGCACTGGCTGTTTCTGTGGTGTTTGGAGAAGAG +
Preference number: 5 (lower is better)
Translates to: LSWHLLSLAPCFVRM*ITMALAVSVVFGEE
Trigger: CTCTTCTCCAAACACCACAGAAACAGCCAGTGCCATTGTTATGCACATTCTCACAAAGCAAGGAGCTAGAGAGAGCAGGTGCCAGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp GATAATATAATAATAGCTGCTGCTCATGGTGTGCTTGCCAGGGCCTaGCGCTACCCAGACACTGAACGATCATGCTCTTATGCAACCAGC +
Preference number: 5 (lower is better)
Translates to: DNIIIAAAHGVLARA*RYPDTERSCSYATS
Trigger: GCTGGTTGCATAAGAGCATGATCGTTCAGTGTCTGGGTAGCGCCAGGCCCTGGCAAGCACACCATGAGCAGCAGCTATTATTATATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CCATCCCGTACTAGTTCATCAACTTTCCTTCCTCATGATCTGCAAAGATACAGACTGGTGGCAACCGTCTaGCGATCCTGCTCCCACTTG +
Preference number: 5 (lower is better)
Translates to: PSRTSSSTFLPHDLQRYRLVATV*RSCSHL
Trigger: CAAGTGGGAGCAGGATCGCAAGACGGTTGCCACCAG...TCTGTATCTTTGCAGATCATGAGGAAGGAAAGTTGATGAACTAGTACGGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGGAACCAAAGCAGTTGTaGTGTGCTGAGGAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKEPKQL*CAEEMV
Trigger: CACCATCTCCTCAGCACACAACAACTGCTTTGGTTC...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTTGGGAACCAAAGCAGTaGTTGTGTGCTGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVWEPKQ*LCAEEM
Trigger: CATCTCCTCAGCACACAACAACTGCTTTGGTTCCCA...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTCCAGTGGGGCCTTTTTaGTGTCTTTCACATCACTGT +
Preference number: 5 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTPVGPF*CLSHHC
Trigger: ACAGTGATGTGAAAGACACAAAAAAGGCCCCACTGG...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTCCCTGCTTCTATAAGCTGCAGGAGTCGCCTAGGATATGGCCCGTCACGTCTGGATGAAACCAATTTCTaGTCCACACAGCCACCATAT +
Preference number: 5 (lower is better)
Translates to: FPASISCRSRLGYGPSRLDETNF*STQPPY
Trigger: ATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATC...CAGACGTGACGGGCCATATCCTAGGCGACTCCTGCAGCTTATAGAAGCAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAATGGAGTGCAGAGGGATaGGCATTTGTAAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKWSAEG*AFVKTA
Trigger: AGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCA...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CAGCCAGGCCGAGCACTCGTCATCGTCTTCAGGGATGTCTTCCAGTGGGATCCTCCTGGAGTATTTGGTTaGTGTTTAAATGTACTTGAC +
Preference number: 5 (lower is better)
Translates to: QPGRALVIVFRDVFQWDPPGVFG*CLNVLD
Trigger: GTCAAGTACATTTAAACACAAACCAAATACTCCAGG...AGGATCCCACTGGAAGACATCCCTGAAGACGATGACGAGTGCTCGGCCTGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS-3UTR CAA 90 bp CACTCTGGAAACACTCAACCTAAGCCCTGGATGCAGGAGGCAGGGATGCTGAGGCTGAAAAGTCATCCATaGAATGGTCTGTTCCTGAAT +
Preference number: 5 (lower is better)
Translates to: HSGNTQPKPWMQEAGMLRLKSHP*NGLFLN
Trigger: ATTCAGGAACAGACCATTCAATGGATGACTTTTCAG...CCTCAGCATCCCTGCCTCCTGCATCCAGGGCTTAGGTTGAGTGTTTCCAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAAATTCTTAGGGCATCTTaGCTCTCTCCTGGCCATTAC +
Preference number: 5 (lower is better)
Translates to: VCKGRWRCYRAELFRGVKILRAS*LSPGHY
Trigger: GTAATGGCCAGGAGAGAGCAAAGATGCCCTAAGAAT...TTTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GACAGCAGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGTTTGAAAAGGCACATTaGGTCAGTCTGATGTCATTC +
Preference number: 5 (lower is better)
Translates to: DSSLQRPLEMLQGRTIPWFEKAH*VSLMSF
Trigger: GAATGACATCAGACTGACCAAATGTGCCTTTTCAAA...CCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACTGCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp TTCAGCTATGTGACACAGGCTCAACCGCTACACGCTGCAGTGTGTTaGAGACGACAAAAGTCAACTGAAGAGACCCAGTTCCAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: FSYVTQAQPLHAAVC*RRQKSTEETQFQRH
Trigger: ATGCCTTTGGAACTGGGTCTCTTCAGTTGACTTTTGTCGTCTTCAACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCACATAGCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436279.1
ENST00000624499.2
CDS GCA 90 bp ACAGGGCATTGTTCCCAGGTGCAAAACCTGATCTCTAAGTTCTGGTaGAAACTCTTAGGACCTTTCCTAGCCCCAGACCAATGTACACTG +
Preference number: 5 (lower is better)
Translates to: TGHCSQVQNLISKFW*KLLGPFLAPDQCTL
Trigger: CAGTGTACATTGGTCTGGGGCTAGGAAAGGTCCTAAGAGTTTGCACCAGAACTTAGAGATCAGGTTTTGCACCTGGGAACAATGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp AATCACCAGCTGCCTCTAAACTACAGTTTGAATTCCAGGAGACGCTaGCACCTCAGAAAGCCTAGCTGTAAAGGTGGTAAGACAGGTGAC +
Preference number: 5 (lower is better)
Translates to: NHQLPLNYSLNSRRR*HLRKPSCKGGKTGD
Trigger: GTCACCTGTCTTACCACCTTTACAGCTAGGCTTTCTGAGGTGCCAGCGTCTCCTGGAATTCAAACTGTAGTTTAGAGGCAGCTGGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp CAAGCTTTCAACAACCCTGGCTTTATGAGCGGTGGGATCAGACTCTaGCTTGTTAAAGACACTGCCAGAGGATCCTGGTCAACAAAGAAG +
Preference number: 5 (lower is better)
Translates to: QAFNNPGFMSGGIRL*LVKDTARGSWSTKK
Trigger: CTTCTTTGTTGACCAGGATCCTCTGGCAGTGTCTTTAACAAGCCAGAGTCTGATCCCACCGCTCATAAAGCCAGGGTTGTTGAAAGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACCTTCCTGGCAGCCTTaGGCACATGGACTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: YLWQPRVTENSAPKDERGPSWQP*AHGLRN
Trigger: GTTTCTAAGTCCATGTGCCAAAGGCTGCCAGGAAGG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp ACAGAGTGCCTTACTTCTTCCTCCCGATTAATCGTGTTCACTATATGGTGGCAGAAGCCTGGGGGTTTTTaGTACATGGGATGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: TECLTSSSRLIVFTIWWQKPGGF*YMGCRL
Trigger: GAGCCGACATCCCATGTACAAAAAACCCCCAGGCTT...CTGCCACCATATAGTGAACACGATTAATCGGGAGGAAGAAGTAAGGCACTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCGGCTGCATAACAAAATaGTTCTTCGTGGACAGGTCA +
Preference number: 5 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGGCITK*FFVDRS
Trigger: TGACCTGTCCACGAAGAACAATTTTGTTATGCAGCC...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGTCTGCAAAGGCCGCTGGAGATGCTACAGGGCAGAACTATTCCGTGGAGTAAAGCTGGATTAAATCTCTaGAGCAGAAGTAGAGACCCT +
Preference number: 5 (lower is better)
Translates to: SLQRPLEMLQGRTIPWSKAGLNL*SRSRDP
Trigger: AGGGTCTCTACTTCTGCTCAAGAGATTTAATCCAGC...TTTACTCCACGGAATAGTTCTGCCCTGTAGCATCTCCAGCGGCCTTTGCAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACTACTCCACAGGACCTaGGAGAGTTGCATTTTGGGG +
Preference number: 5 (lower is better)
Translates to: YLWQPRVTENSAPKDERGLLHRT*ESCILG
Trigger: CCCCAAAATGCAACTCTCCAAGGTCCTGTGGAGTAG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TACATTTCTCAAGCTCCTCACGGTGATGGCGAAGCCCTTGGTTCGTGGCAACAGATGTTACACATGGGCTaGCCTAAGTATTTCCTTCTC +
Preference number: 5 (lower is better)
Translates to: YISQAPHGDGEALGSWQQMLHMG*PKYFLL
Trigger: GAGAAGGAAATACTTAGGCAAGCCCATGTGTAACAT...CTGTTGCCACGAACCAAGGGCTTCGCCATCACCGTGAGGAGCTTGAGAAATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS CCA 90 bp TCTACAGGGCATTGTTCCCAGGTGCAAAACCTGATCTCTAAGTTCTaGTGCAAACTCTTAGGACCTTTCCTAGCCCCAGACCAATGTACA +
Preference number: 5 (lower is better)
Translates to: STGHCSQVQNLISKF*CKLLGPFLAPDQCT
Trigger: TGTACATTGGTCTGGGGCTAGGAAAGGTCCTAAGAGTTTGCACCAGAACTTAGAGATCAGGTTTTGCACCTGGGAACAATGCCCTGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp GCACCCCCAAGTTCAATGGGCCTTCTGCTCTACCTCAGAGACTCCTaGTCCACGAATTATGAATGTTTGCACATTCTAAGCATGAACACT +
Preference number: 5 (lower is better)
Translates to: APPSSMGLLLYLRDS*STNYECLHILSMNT
Trigger: AGTGTTCATGCTTAGAATGTGCAAACATTCATAATTCGTGGACCAGGAGTCTCTGAGGTAGAGCAGAAGGCCCATTGAACTTGGGGGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CAGATTTCACTCAAGGTTCGTATTTTTCTCTGCCACCTTGAACTACAGAACAGGTCTCCACGCACGTGCTaGCCATCTCTGCTCTCACAA +
Preference number: 5 (lower is better)
Translates to: QISLKVRIFLCHLELQNRSPRTC*PSLLSQ
Trigger: TTGTGAGAGCAGAGATGGCAAGCACGTGCGTGGAGA...CCTGTTCTGTAGTTCAAGGTGGCAGAGAAAAATACGAACCTTGAGTGAAATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGCCTTGCTGTGTTTGCCTCAGATGCGAGTAAGGAAGCTCCAGTTGTAGCCTTGTCTTCACTGGATACCTaGCTTCACACTTTGGTCAAT +
Preference number: 5 (lower is better)
Translates to: SLAVFASDASKEAPVVALSSLDT*LHTLVN
Trigger: ATTGACCAAAGTGTGAAGCAAGGTATCCAGTGAAGA...CAAGGCTACAACTGGAGCTTCCTTACTCGCATCTGAGGCAAACACAGCAAGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGGGGTTAGGGCCCGTCTaGCTTTCATGTTCTTTTAAA +
Preference number: 5 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKGLGPV*LSCSFK
Trigger: TTTAAAAGAACATGAAAGCAAGACGGGCCCTAACCC...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGACTGCTTGCTTACCCTTaGTCTGGCATGCACATTCAG +
Preference number: 5 (lower is better)
Translates to: YLWQPRVTENSAPKDERGLLAYP*SGMHIQ
Trigger: CTGAATGTGCATGCCAGACAAAGGGTAAGCAAGCAG...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp CTCCTAACATACAAATCTGCATGGTATTTCTTTCCGTTTAGGACTCCCAGCAGTCCAGCCTTGCTGTGTTaGCCTCAGATGCGAGTAAGG +
Preference number: 5 (lower is better)
Translates to: LLTYKSAWYFFPFRTPSSPALLC*PQMRVR
Trigger: CCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGG...ACTGCTGGGAGTCCTAAACGGAAAGAAATACCATGCAGATTTGTATGTTAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366911.9
CDS CCA 90 bp GATACAGAAAGGAATTGTCCCTTGATGTCTATTCACCACTCTGCTTaGAGAAACCATGCACCACTTCCACTTGCTGCTCAGCGATCTTCT +
Preference number: 5 (lower is better)
Translates to: DTERNCPLMSIHHSA*RNHAPLPLAAQRSS
Trigger: AGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAGTGGTGAATAGACATCAAGGGACAATTCCTTTCTGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CAA 90 bp ATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGTTCCGGAAGAGCTGCTaGTTAATGGGCCAGAGGAGG +
Preference number: 5 (lower is better)
Translates to: MIAHKKLLRLTPSKNKKQFRKSC*LMGQRR
Trigger: CCTCCTCTGGCCCATTAACAAGCAGCTCTTCCGGAA...CTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CAA 90 bp ATATGGATGGGAGTGAAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAGCATCACCAGCTGGCTaGAGATGCAATAGGACAGTC +
Preference number: 5 (lower is better)
Translates to: IWMGVKSKSNYSCVTLSRASPAG*RCNRTV
Trigger: GACTGTCCTATTGCATCTCAAGCCAGCTGGTGATGC...TCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTTCACTCCCATCCATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CAA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTATTTCAAACTTGTGGTaGAGAACCACGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTISNLW*RTTMAF
Trigger: AAATGCCATCGTGGTTCTCAACCACAAGTTTGAAAT...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR CAA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCCATTTTTGGCACCTGTaGGCTGACAGCAGTCTGCAA +
Preference number: 5 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLHFWHL*ADSSLQ
Trigger: TTGCAGACTGCTGTCAGCCAACAGGTGCCAAAAATG...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AAAGATTACAAAACATCTTCCTCCCCATCCGGCCTTGAGACCAGACTCCCTGGCTCGATACTATGTCAGTaGGTGATGAATGCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: KDYKTSSSPSGLETRLPGSILCQ*VMNAVN
Trigger: ATTCACAGCATTCATCACCAACTGACATAGTATCGA...GCCAGGGAGTCTGGTCTCAAGGCCGGATGGGGAGGAAGATGTTTTGTAATCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp TCTAACTTCTCTTCAGCCAAAGAGCCCTTGACAAGTGCATGTGTATaGAGAAGCTGGGGTAAAGGCGGTGAAATAATGCTGTGTTGCATG +
Preference number: 5 (lower is better)
Translates to: SNFSSAKEPLTSACV*RSWGKGGEIMLCCM
Trigger: CATGCAACACAGCATTATTTCACCGCCTTTACCCCAGCTTCTTCATACACATGCACTTGTCAAGGGCTCTTTGGCTGAAGAGAAGTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 90 bp CTCCATATCTGGAAACTTCTAACTTCTCTTCAGCCAAAGAGCCCTTaGCAAGTGCATGTGTATGAAGAAGCTGGGGTAAAGGCGGTGAAA +
Preference number: 5 (lower is better)
Translates to: LHIWKLLTSLQPKSP*QVHVYEEAGVKAVK
Trigger: TTTCACCGCCTTTACCCCAGCTTCTTCATACACATGCACTTGTCAAGGGCTCTTTGGCTGAAGAGAAGTTAGAAGTTTCCAGATATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp TCTAAAGCCTATGCGAAGCCCATTCTGTTTTGCTTGGGGACCAGCCAGACCACTAAGCTTTGCATGCATTaGTTTAGAGGATATTGCAGT +
Preference number: 5 (lower is better)
Translates to: SKAYAKPILFCLGTSQTTKLCMH*FRGYCS
Trigger: ACTGCAATATCCTCTAAACAAATGCATGCAAAGCTT...AGTGGTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTCGCATAGGCTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp GGGAAGCACCCTTCTGAGATGAAACCAATTTCTTGTCCACACAGCCACCATATCGATGAAACCAATTTCTaGTCCACACAGCCACCATAT +
Preference number: 5 (lower is better)
Translates to: GKHPSEMKPISCPHSHHIDETNF*STQPPY
Trigger: ATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATC...GATATGGTGGCTGTGTGGACAAGAAATTGGTTTCATCTCAGAAGGGTGCTTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGACACTTTACAAGTCTGAGCCATCCCGTACTAGTTCATCAACTTTCCTTCCTCTGGAGTGCAGAGGGATaGGCATTTGTAAAGACTGCT +
Preference number: 5 (lower is better)
Translates to: RHFTSLSHPVLVHQLSFLWSAEG*AFVKTA
Trigger: AGCAGTCTTTACAAATGCCAATCCCTCTGCACTCCA...GAGGAAGGAAAGTTGATGAACTAGTACGGGATGGCTCAGACTTGTAAAGTGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCAGGCACTGTGCTGGCTaGGGGGATCCTGTGATGACT +
Preference number: 5 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVRHCAG*GDPVMT
Trigger: AGTCATCACAGGATCCCCCAAGCCAGCACAGTGCCT...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp ATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAAAAGCAGTTTCCTTCCTGGCAGCCTTaGGCACATGGACTTAGAAAC +
Preference number: 5 (lower is better)
Translates to: IAHKKLLRLTPSKNKKQFPSWQP*AHGLRN
Trigger: GTTTCTAAGTCCATGTGCCAAAGGCTGCCAGGAAGG...AAACTGCTTTTTATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CAA 90 bp GTCAGCAAGGAAAAGTGTCTCACCCAAATCCTACAGCCGATGAGCTGCAGAGTTAAGCTTTGCATGCATTaGTTTAGAGGATATTGCAGT +
Preference number: 5 (lower is better)
Translates to: VSKEKCLTQILQPMSCRVKLCMH*FRGYCS
Trigger: ACTGCAATATCCTCTAAACAAATGCATGCAAAGCTT...AACTCTGCAGCTCATCGGCTGTAGGATTTGGGTGAGACACTTTTCCTTGCTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTGAAGCCCATTCTGTTTaGCTTGGGGACCAGCCAGAC +
Preference number: 5 (lower is better)
Translates to: FLENSFAISLVTPKLQNIEAHSV*LGDQPD
Trigger: GTCTGGCTGGTCCCCAAGCAAAACAGAATGGGCTTC...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TATCTCTGGCAACCAAGGGTTACAGAAAACTCAGCACCAAAGGATGAAAGGGGAGCAGCAATCTTAACTTaGTGTACATACCACTCACCT +
Preference number: 5 (lower is better)
Translates to: YLWQPRVTENSAPKDERGAAILT*CTYHSP
Trigger: AGGTGAGTGGTATGTACACAAAGTTAAGATTGCTGC...TCCCCTTTCATCCTTTGGTGCTGAGTTTTCTGTAACCCTTGGTTGCCAGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATCCAGCCTTGCTGTGTTaGCCTCAGATGCGAGTAAGG +
Preference number: 5 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDPALLC*PQMRVR
Trigger: CCTTACTCGCATCTGAGGCAAACACAGCAAGGCTGG...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTAGGGCTGCAGACAAGCTCTACATGCTGGGAAGGGGCGAGGCATTTTATAAAGAAAAATTTGGAAAGATaGCTACACATGACAGAGCGA +
Preference number: 5 (lower is better)
Translates to: LGLQTSSTCWEGARHFIKKNLER*LHMTER
Trigger: TCGCTCTGTCATGTGTAGCAATCTTTCCAAATTTTT...CTTTATAAAATGCCTCGCCCCTTCCCAGCATGTAGAGCTTGTCTGCAGCCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS TCA 90 bp AATGGGCCTTCTGCTCTACCTCAGAGACTCCTGGTCCACGAATTATaGATGTTTGCACATTCTAAGCATGAACACTACCAGAAAGTACTT +
Preference number: 5 (lower is better)
Translates to: NGPSALPQRLLVHEL*MFAHSKHEHYQKVL
Trigger: AAGTACTTTCTGGTAGTGTTCATGCTTAGAATGTGCAAACATTCATAATTCGTGGACCAGGAGTCTCTGAGGTAGAGCAGAAGGCCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp TTCCTGGAGAACAGCTTTGCTATTTCACTGGTAACTCCGAAACTTCAAAATATTGCATCACCAGCTGGCTaGAGATGCAATAGGACAGTC +
Preference number: 5 (lower is better)
Translates to: FLENSFAISLVTPKLQNIASPAG*RCNRTV
Trigger: GACTGTCCTATTGCATCTCAAGCCAGCTGGTGATGC...AATATTTTGAAGTTTCGGAGTTACCAGTGAAATAGCAAAGCTGTTCTCCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000320285.9
CDS-3UTR CAA 90 bp AGCAGTAATTTCAAACAGTTGAATGTCGTGATCGATACTATGTCAGTTGGTGATTTATCAGGGGTGACTTaGGCTGTCACTGCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: SSNFKQLNVVIDTMSVGDLSGVT*AVTAER
Trigger: CCTCTCAGCAGTGACAGCCAAAGTCACCCCTGATAA...ATCACCAACTGACATAGTATCGATCACGACATTCAACTGTTTGAAATTACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTTGACAAACTGGGTCGGGCACCCAGATTTGGGGCACGTAAAGCTTTAGATCTACTTCTGACTGCAAGGTaGATCATTAAAATGAAATCC +
Preference number: 5 (lower is better)
Translates to: FDKLGRAPRFGARKALDLLLTAR*IIKMKS
Trigger: GGATTTCATTTTAATGATCAACCTTGCAGTCAGAAG...TAGATCTAAAGCTTTACGTGCCCCAAATCTGGGTGCCCGACCCAGTTTGTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CAA 90 bp TTGACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCCACTATTCACCACTCTGCTaGGAGAAACCATGCACCACT +
Preference number: 5 (lower is better)
Translates to: LTYTTLLTARLIIKMKSHYSPLC*EKPCTT
Trigger: AGTGGTGCATGGTTTCTCCAAGCAGAGTGGTGAATA...GTGGGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS TCA 90 bp CCCCTTACACACAGCATTAGTTGTTTGGGTGTTCACAGTAATGAGTaGAGTCCTATAAATAGAATATCACCGATGAAATCAAGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: PLTHSISCLGVHSNE*SPINRISPMKSRGG
Trigger: ACCTCCCCTTGATTTCATCGGTGATATTCTATTTATAGGACTTCACTCATTACTGTGAACACCCAAACAACTAATGCTGTGTGTAAGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 90 bp CACTGGACACGTATTTTGAAGGTATATCAATTGCTATCGTTGTCATaGTCGAAAATCCTTCGTTTAAAGAGGCAGCACAGGGCTTTATGG +
Preference number: 5 (lower is better)
Translates to: HWTRILKVYQLLSLS*SKILRLKRQHRALW
Trigger: CCATAAAGCCCTGTGCTGCCTCTTTAAACGAAGGATTTTCGATCATGACAACGATAGCAATTGATATACCTTCAAAATACGTGTCCAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 90 bp CTTGTTGTTTTAAGCCGCTATGTTTTGGGTCTCATCACGCTGCCATaGATAACTAATCCACATGGCTTCTTTAAGGATCTGAAGACAAAT +
Preference number: 5 (lower is better)
Translates to: LVVLSRYVLGLITLP*ITNPHGFFKDLKTN
Trigger: ATTTGTCTTCAGATCCTTAAAGAAGCCATGTGGATTAGTTATCCATGGCAGCGTGATGAGACCCAAAACATAGCGGCTTAAAACAACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp ATATGGATGGGAGTGAAATCCAAATCTAATTACAGCTGTGTGACTCTGAGCCGAATTTCAAACTTGTGGTaGAGAACCACGATGGCATTT +
Preference number: 5 (lower is better)
Translates to: IWMGVKSKSNYSCVTLSRISNLW*RTTMAF
Trigger: AAATGCCATCGTGGTTCTCAACCACAAGTTTGAAAT...TCGGCTCAGAGTCACACAGCTGTAATTAGATTTGGATTTCACTCCCATCCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CAA 90 bp GTACCTCTTATGATTGCCCATAAGAAGCTGTTAAGACTGACTCCCAGCAAGAATAAGTCAATTTCAAACTaGTGGTTGAGAACCACGATG +
Preference number: 5 (lower is better)
Translates to: VPLMIAHKKLLRLTPSKNKSISN*WLRTTM
Trigger: CATCGTGGTTCTCAACCACAAGTTTGAAATTGACTT...ATTCTTGCTGGGAGTCAGTCTTAACAGCTTCTTATGGGCAATCATAAGAGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS-3UTR CAA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCCCAGTGGGGCCTTTTTaGTGTCTTTCACATCACTGT +
Preference number: 5 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVPVGPF*CLSHHC
Trigger: ACAGTGATGTGAAAGACACAAAAAAGGCCCCACTGG...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS GCA 90 bp TTTAAACTCATTTCCTCTTGGACTGTGATAGGTGAGGATGAAAAATaGCTGGTCAGGAACCTTCTTCTGTTCCTTTCCTCTTTAAAAAGC +
Preference number: 5 (lower is better)
Translates to: FKLISSWTVIGEDEK*LVRNLLLFLSSLKS
Trigger: GCTTTTTAAAGAGGAAAGGAACAGAAGAAGGTTCCTGACCAGGCATTTTTCATCCTCACCTATCACAGTCCAAGAGGAAATGAGTTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp GTCATCTCACCTAAAGCACTTTTCACTTTATCTCTGGCAACCAAGGGTTACAGACAAATTGTACGTCTGTaGTTTTCAAAAGCCATTGTG +
Preference number: 5 (lower is better)
Translates to: VISPKALFTLSLATKGYRQIVRL*FSKAIV
Trigger: CACAATGGCTTTTGAAAACAACAGACGTACAATTTG...TCTGTAACCCTTGGTTGCCAGAGATAAAGTGAAAAGTGCTTTAGGTGAGATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS-3UTR CAA 90 bp TTGACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCCACCAACAGAACTGTCTTTaGACATACACCACACTTCTG +
Preference number: 5 (lower is better)
Translates to: LTYTTLLTARLIIKMKSHQQNCL*TYTTLL
Trigger: CAGAAGTGTGGTGTATGTCAAAAGACAGTTCTGTTG...GTGGGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS GCA 90 bp CTCTCATCAGAGAGAATAAATCCACAAAGCTGTAACTCAGATCTCTaGCCAAGTTCTCCACATCAGAGAATGATAGTTACTAGAATGTTT +
Preference number: 5 (lower is better)
Translates to: LSSERINPQSCNSDL*PSSPHQRMIVTRMF
Trigger: AAACATTCTAGTAACTATCATTCTCTGATGTGGAGAACTTGGGCAGAGATCTGAGTTACAGCTTTGTGGATTTATTCTCTCTGATGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS-3UTR CAA 90 bp CTTTTGACATACACCACACTTCTGACTGCAAGGTTGATCATTAAAATGAAATCCGAAAGGAATTGTCCCTaGATGTCTATTCACCACTCT +
Preference number: 5 (lower is better)
Translates to: LLTYTTLLTARLIIKMKSERNCP*MSIHHS
Trigger: AGAGTGGTGAATAGACATCAAGGGACAATTCCTTTC...GGATTTCATTTTAATGATCAACCTTGCAGTCAGAAGTGTGGTGTATGTCAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS-3UTR CAA 90 bp AAGATACAGAGAGAATGGCATTCCAAAATTCCATGGATGACTTTTCTGAATGTCAGTCCTTCTCTCAAATaGTACGTCTGTTGTTTTCAA +
Preference number: 5 (lower is better)
Translates to: KIQREWHSKIPWMTFLNVSPSLK*YVCCFQ
Trigger: TTGAAAACAACAGACGTACAATTTGAGAGAAGGACT...GACATTCAGAAAAGTCATCCATGGAATTTTGGAATGCCATTCTCTCTGTATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000320285.9
ENST00000366911.9
CDS GCA 72 bp GGGTACAGGCTGGCAGCTCCCATCCGCCCCAGCCAGTaGCTGCCATGTGCCTGCCCCACTCAGTCCTCTCCT +
Preference number: 6 (lower is better)
Translates to: GYRLAAPIRPSQ*LPCACPTQSSP
Trigger: AGGAGAGGACTGAGTGGGGCAGGCACATGGCAGGCACTGGCTGGGGCGGATGGGAGCTGCCAGCCTGTACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp CCCTCCCGAGAGACCCTGCCAGATCCCCCGCTCAGCTaGACCTGGATTCCTGACCACATAGGCAGGGGACCT +
Preference number: 6 (lower is better)
Translates to: PSRETLPDPPLS*TWIPDHIGRGP
Trigger: AGGTCCCCTGCCTATGTGGTCAGGAATCCAGGTGCAGCTGAGCGGGGGATCTGGCAGGGTCTCTCGGGAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GGTATGAACCCGCGGTGCAGCCATAGTCCCGTGAGCTaGCCACTTCCTGCCCTGGCCAGTGGTTCGCCTGCT +
Preference number: 6 (lower is better)
Translates to: GMNPRCSHSPVS*PLPALASGSPA
Trigger: AGCAGGCGAACCACTGGCCAGGGCAGGAAGTGGGCAGCTCACGGGACTATGGCTGCACCGCGGGTTCATACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp GCGGTCCCTATGCTGCAGGTGGGATGGGCGTGCTGTTaGCTTGCTTTCCCGCCATCAGCGCTCCCGCCCTTA +
Preference number: 6 (lower is better)
Translates to: AVPMLQVGWACC*LAFPPSALPPL
Trigger: TAAGGGCGGGAGCGCTGATGGCGGGAAAGCAAGTCAACAGCACGCCCATCCCACCTGCAGCATAGGGACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GAGGCAGATCACACACAAGCCCCTCCCGAGAGACCCTaGCAGATCCCCCGCTCAGCTGCACCTGGATTCCTG +
Preference number: 6 (lower is better)
Translates to: EADHTQAPPERP*QIPRSAAPGFL
Trigger: CAGGAATCCAGGTGCAGCTGAGCGGGGGATCTGGCAGGGTCTCTCGGGAGGGGCTTGTGTGTGATCTGCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp CCCACCTCCAGGATGGTAGTCGGTATGAACCCGCGGTaGAGCCATAGTCCCGTGAGCTGCCCACTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: PTSRMVVGMNPR*SHSPVSCPLPA
Trigger: GGCAGGAAGTGGGCAGCTCACGGGACTATGGCTGCACCGCGGGTTCATACCGACTACCATCCTGGAGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp GGGATGGAGGCCGGGCAGCAAACCCGTGAGCAAGCTTaGAGGCAGATCACACACAAGCCCCTCCCGAGAGAC +
Preference number: 6 (lower is better)
Translates to: GMEAGQQTREQA*RQITHKPLPRD
Trigger: GTCTCTCGGGAGGGGCTTGTGTGTGATCTGCCTCCAAGCTTGCTCACGGGTTTGCTGCCCGGCCTCCATCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp TGCGGTCCCTATGCTGCAGGTGGGATGGGCGTGCTGTaGACTTGCTTTCCCGCCATCAGCGCTCCCGCCCTT +
Preference number: 6 (lower is better)
Translates to: CGPYAAGGMGVL*TCFPAISAPAL
Trigger: AAGGGCGGGAGCGCTGATGGCGGGAAAGCAAGTCAACAGCACGCCCATCCCACCTGCAGCATAGGGACCGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp AAGGGGAGGTGCGGTCCCTATGCTGCAGGTGGGATGGGCGTGCTGTaGACTTGCTTTCCCGCCATCAGCGCTCCCGCCCTTATGCTCAGA +
Preference number: 6 (lower is better)
Translates to: KGRCGPYAAGGMGVL*TCFPAISAPALMLR
Trigger: TCTGAGCATAAGGGCGGGAGCGCTGATGGCGGGAAAGCAAGTCAACAGCACGCCCATCCCACCTGCAGCATAGGGACCGCACCTCCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp GGTGTACAGCAGACAGCACAGGCTGTGACCGTTTGCTaGGGGCTGCGCACAGAGGAGGAGGAAGCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: GVQQTAQAVTVC*GLRTEEEEAPS
Trigger: GCTTGGGGCTTCCTCCTCCTCTGTGCGCAGCCCTCAGCAAACGGTCACAGCCTGTGCTGTCTGCTGTACACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp CCCTATGCTGCAGGTGGGATGGGCGTGCTGTTGACTTaGTTTCCCGCCATCAGCGCTCCCGCCCTTATGCTC +
Preference number: 6 (lower is better)
Translates to: PYAAGGMGVLLT*FPAISAPALML
Trigger: GAGCATAAGGGCGGGAGCGCTGATGGCGGGAAAGCAAGTCAACAGCACGCCCATCCCACCTGCAGCATAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp GCAAGGGAAGGTCTCAGACCAAATGTCATGTCACCGTaGGGTGGGCAGCCGCCAAGGGGCCCTGTGATCCTG +
Preference number: 6 (lower is better)
Translates to: AREGLRPNVMSP*GGQPPRGPVIL
Trigger: CAGGATCACAGGGCCCCTTGGCGGCTGCCCACCCCACGGTGACATGACATTTGGTCTGAGACCTTCCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp GAGGTGCGGTCCCTATGCTGCAGGTGGGATGGGCGTGCTGTTGACTaGCTTTCCCGCCATCAGCGCTCCCGCCCTTATGCTCAGAGTTGT +
Preference number: 6 (lower is better)
Translates to: EVRSLCCRWDGRAVD*LSRHQRSRPYAQSC
Trigger: ACAACTCTGAGCATAAGGGCGGGAGCGCTGATGGCGGGAAAGCAAGTCAACAGCACGCCCATCCCACCTGCAGCATAGGGACCGCACCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp TCAAGGCCCCTTCCCAGTTTCTCTTCTGAACGGACAGCCCAGCCCTaGTGGGATGGCGTTAGCCCCGCAGATGGGAAGGCAGAGCAGAGG +
Preference number: 6 (lower is better)
Translates to: SRPLPSFSSERTAQP*WDGVSPADGKAEQR
Trigger: CCTCTGCTCTGCCTTCCCATCTGCGGGGCTAACGCCATCCCACAAGGGCTGGGCTGTCCGTTCAGAAGAGAAACTGGGAAGGGGCCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp CCACAGCTCTCCAGTAGATGGCAAAGCTGTTCCCTGTaGCATGGGGAGGGGGTTCCCTGGGAGGGTACAGGC +
Preference number: 6 (lower is better)
Translates to: PQLSSRWQSCSL*HGEGVPWEGTG
Trigger: GCCTGTACCCTCCCAGGGAACCCCCTCCCCATGTCACAGGGAACAGCTTTGCCATCTACTGGAGAGCTGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp TGCATGTGTTGTGGGGCTCACCTTCTCCCTCATCTGTaGCTGTCCCCGTGCCTGCTAGTGCTGGGCATCTGG +
Preference number: 6 (lower is better)
Translates to: CMCCGAHLLPHL*LSPCLLVLGIW
Trigger: CCAGATGCCCAGCACTAGCAGGCACGGGGACAGGCACAGATGAGGGAGAAGGTGAGCCCCACAACACATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GGGGCTATGTCCTCTCTCTGGACCTGGGTCCCTCCCTaGATGTGTTGTGGGGCTCACCTTCTCCCTCATCTG +
Preference number: 6 (lower is better)
Translates to: GAMSSLWTWVPP*MCCGAHLLPHL
Trigger: CAGATGAGGGAGAAGGTGAGCCCCACAACACATGCAGGGAGGGACCCAGGTCCAGAGAGAGGACATAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GAGCTGCCCACTTCCTGCCCTGGCCAGTGGTTCGCCTaGTACCTCGGTCGTCACCATTATCGGGTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: ELPTSCPGQWFA*YLGRHHYRVPH
Trigger: ATGAGGAACCCGATAATGGTGACGACCGAGGTAGCAGGCGAACCACTGGCCAGGGCAGGAAGTGGGCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp CGGCTGTCAGGACACAAAGATGGGAGAGGAGCTCCCTaGACAAAGCCCTTGTCCACCCTGCCTGGACACAGG +
Preference number: 6 (lower is better)
Translates to: RLSGHKDGRGAP*TKPLSTLPGHR
Trigger: CCTGTGTCCAGGCAGGGTGGACAAGGGCTTTGTGCAGGGAGCTCCTCTCCCATCTTTGTGTCCTGACAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp CCCAGTTTCTCTTCTGAACGGACAGCCCAGCCCTTGTaGGATGGCGTTAGCCCCGCAGATGGGAAGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PSFSSERTAQPL*DGVSPADGKAE
Trigger: CTCTGCCTTCCCATCTGCGGGGCTAACGCCATCCCACAAGGGCTGGGCTGTCCGTTCAGAAGAGAAACTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp AGGAGCTCCCTGCACAAAGCCCTTGTCCACCCTGCCTaGACACAGGTCCTCAAGGCCCCTTCCCAGTTTCTC +
Preference number: 6 (lower is better)
Translates to: RSSLHKALVHPA*TQVLKAPSQFL
Trigger: GAGAAACTGGGAAGGGGCCTTGAGGACCTGTGTCCAGGCAGGGTGGACAAGGGCTTTGTGCAGGGAGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp TCCCTATGCTGCAGGTGGGATGGGCGTGCTGTTGACTaGCTTTCCCGCCATCAGCGCTCCCGCCCTTATGCT +
Preference number: 6 (lower is better)
Translates to: SLCCRWDGRAVD*LSRHQRSRPYA
Trigger: AGCATAAGGGCGGGAGCGCTGATGGCGGGAAAGCAAGTCAACAGCACGCCCATCCCACCTGCAGCATAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp ACAGAAGCTTCATGGCTCCTGCCCCGGGCGCCCGCTCTCTCTCTCTaGCATGGCTCAACCTCAGGGGTGCAGTTGCCATATTCCGGGAAA +
Preference number: 6 (lower is better)
Translates to: TEASWLLPRAPALSL*HGSTSGVQLPYSGK
Trigger: TTTCCCGGAATATGGCAACTGCACCCCTGAGGTTGAGCCATGCAAGAGAGAGAGAGCGGGCGCCCGGGGCAGGAGCCATGAAGCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp CTGTCAGGACACAAAGATGGGAGAGGAGCTCCCTGCACAAAGCCCTaGTCCACCCTGCCTGGACACAGGTCCTCAAGGCCCCTTCCCAGT +
Preference number: 6 (lower is better)
Translates to: LSGHKDGRGAPCTKP*STLPGHRSSRPLPS
Trigger: ACTGGGAAGGGGCCTTGAGGACCTGTGTCCAGGCAGGGTGGACAAGGGCTTTGTGCAGGGAGCTCCTCTCCCATCTTTGTGTCCTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp CGGTTTGTTGGGCACCTTAGTGACCTGTGCCCCAGCTaGCTGCGTGTCACTCTCATCTCCAGGGAGGCAAGG +
Preference number: 6 (lower is better)
Translates to: RFVGHLSDLCPS*LRVTLISREAR
Trigger: CCTTGCCTCCCTGGAGATGAGAGTGACACGCAGTCAGCTGGGGCACAGGTCACTAAGGTGCCCAACAAACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp TGGTGTGCTTGCCAGGGCCTGGCGCTACCCAGACACTaGACGATCATGCTCTTATGCAACCAGCCGGGACCT +
Preference number: 6 (lower is better)
Translates to: WCACQGLALPRH*TIMLLCNQPGP
Trigger: AGGTCCCGGCTGGTTGCATAAGAGCATGATCGTTCAGTGTCTGGGTAGCGCCAGGCCCTGGCAAGCACACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp CCCGGTGTGTCCAACGTGGGACCGGACTTTTACAGATaGGCATGCGCTCCCACCTCCAGGATGGTAGTCGGT +
Preference number: 6 (lower is better)
Translates to: PGVSNVGPDFYR*ACAPTSRMVVG
Trigger: ACCGACTACCATCCTGGAGGTGGGAGCGCATGCTCATCTGTAAAAGTCCGGTCCCACGTTGGACACACCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GCCAGGGCCTGGCGCTACCCAGACACTGAACGATCATaGTCTTATGCAACCAGCCGGGACCTGCTAAGGGAA +
Preference number: 6 (lower is better)
Translates to: ARAWRYPDTERS*SYATSRDLLRE
Trigger: TTCCCTTAGCAGGTCCCGGCTGGTTGCATAAGAGCATGATCGTTCAGTGTCTGGGTAGCGCCAGGCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp GTGGGACAGAGTACGCGGGGTTCTTGCACTCCTGACTaGCCTCCTCCAGCCAACTTCCCTCTGTTTACCAGG +
Preference number: 6 (lower is better)
Translates to: VGQSTRGSCTPD*PPPANFPLFTR
Trigger: CCTGGTAAACAGAGGGAAGTTGGCTGGAGGAGGCCAGTCAGGAGTGCAAGAACCCCGCGTACTCTGTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp CTTCCCAGTTTCTCTTCTGAACGGACAGCCCAGCCCTaGTGGGATGGCGTTAGCCCCGCAGATGGGAAGGCA +
Preference number: 6 (lower is better)
Translates to: LPSFSSERTAQP*WDGVSPADGKA
Trigger: TGCCTTCCCATCTGCGGGGCTAACGCCATCCCACAAGGGCTGGGCTGTCCGTTCAGAAGAGAAACTGGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp CGGAGTGAGCTCGTGGGTGTAATGCCACCAAGGGGCAAGCAGGGATaGGAAGGCACCCCCAAGTTCAATGGGCCTTCTGCTCTACCTCAG +
Preference number: 6 (lower is better)
Translates to: RSELVGVMPPRGKQG*EGTPKFNGPSALPQ
Trigger: CTGAGGTAGAGCAGAAGGCCCATTGAACTTGGGGGTGCCTTCCAATCCCTGCTTGCCCCTTGGTGGCATTACACCCACGAGCTCACTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GCTCCCAGGAGAACCAGAGCCTCTGGGGACAGGCACTaGAATGAGCAGTGGCCTCATGGGATCTTGAGTACA +
Preference number: 6 (lower is better)
Translates to: APRRTRASGDRH*NEQWPHGILST
Trigger: TGTACTCAAGATCCCATGAGGCCACTGCTCATTGCAGTGCCTGTCCCCAGAGGCTCTGGTTCTCCTGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp GGGCAAGCAGGGATTGGAAGGCACCCCCAAGTTCAATaGGCCTTCTGCTCTACCTCAGAGACTCCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: GQAGIGRHPQVQ*AFCSTSETPGP
Trigger: TGGACCAGGAGTCTCTGAGGTAGAGCAGAAGGCCCATTGAACTTGGGGGTGCCTTCCAATCCCTGCTTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp CTCGTGGGTGTAATGCCACCAAGGGGCAAGCAGGGATaGGAAGGCACCCCCAAGTTCAATGGGCCTTCTGCT +
Preference number: 6 (lower is better)
Translates to: LVGVMPPRGKQG*EGTPKFNGPSA
Trigger: AGCAGAAGGCCCATTGAACTTGGGGGTGCCTTCCAATCCCTGCTTGCCCCTTGGTGGCATTACACCCACGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp ATGATACCAAGTCGGTGTACAGCAGACAGCACAGGCTGTGACCGTTaGCTGAGGGCTGCGCACAGAGGAGGAGGAAGCCCCAAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: MIPSRCTADSTGCDR*LRAAHRGGGSPKLS
Trigger: TGAAAGCTTGGGGCTTCCTCCTCCTCTGTGCGCAGCCCTCAGCAAACGGTCACAGCCTGTGCTGTCTGCTGTACACCGACTTGGTATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp GACAGGCATGCAGATGTGCGGAGAGGAGAAGAGGACCGTGCAGGCTaGAAGCAGCAGGATACTGATCACTACTGGCTCTGCTTTGAGGGG +
Preference number: 6 (lower is better)
Translates to: DRHADVRRGEEDRAG*KQQDTDHYWLCFEG
Trigger: CCCCTCAAAGCAGAGCCAGTAGTGATCAGTATCCTGCTGCTTCAAGCCTGCACGGTCCTCTTCTCCTCTCCGCACATCTGCATGCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp CTCTGCTTGGAGAAACCATGCACCACTTCCACTTGCTaGTCAGCGATCTTCTCGGAAGGGCAAAGGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LCLEKPCTTSTC*SAIFSEGQRAS
Trigger: GCTGGCCCTTTGCCCTTCCGAGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS GCA 72 bp CCACTCTGCTTGGAGAAACCATGCACCACTTCCACTTaGTGCTCAGCGATCTTCTCGGAAGGGCAAAGGGCC +
Preference number: 6 (lower is better)
Translates to: PLCLEKPCTTST*CSAIFSEGQRA
Trigger: GGCCCTTTGCCCTTCCGAGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS GCA 72 bp TTGTTGGGCACCTTAGTGACCTGTGCCCCAGCTGACTaGGTGTCACTCTCATCTCCAGGGAGGCAAGGTTCA +
Preference number: 6 (lower is better)
Translates to: LLGTLVTCAPAD*VSLSSPGRQGS
Trigger: TGAACCTTGCCTCCCTGGAGATGAGAGTGACACGCAGTCAGCTGGGGCACAGGTCACTAAGGTGCCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp TGCACACCCTACCCCACATCCCTGGGGCACGGGCGGTaGTTACTGATCCACTTCCAACCAACAGTATGGATA +
Preference number: 6 (lower is better)
Translates to: CTPYPTSLGHGR*LLIHFQPTVWI
Trigger: TATCCATACTGTTGGTTGGAAGTGGATCAGTAAGCACCGCCCGTGCCCCAGGGATGTGGGGTAGGGTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GGCTTGAAGCAGCAGGATACTGATCACTACTGGCTCTaGTTTGAGGGGTCACGGTCACGGCTGTCAGGACAC +
Preference number: 6 (lower is better)
Translates to: GLKQQDTDHYWL*FEGSRSRLSGH
Trigger: GTGTCCTGACAGCCGTGACCGTGACCCCTCAAAGCAGAGCCAGTAGTGATCAGTATCCTGCTGCTTCAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp GCAGAGCTGATGAATTCACATGGTGGCGGGCAGCACTaGGTATCTGCCATAGGCTCAGGTGATGCCAGCAGT +
Preference number: 6 (lower is better)
Translates to: AELMNSHGGGQH*VSAIGSGDASS
Trigger: ACTGCTGGCATCACCTGAGCCTATGGCAGATACCCAGTGCTGCCCGCCACCATGTGAATTCATCAGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp AAGGTCTGTGCCTGCAGAGCTGATGAATTCACATGGTaGCGGGCAGCACTGGGTATCTGCCATAGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: KVCACRADEFTW*RAALGICHRLR
Trigger: CCTGAGCCTATGGCAGATACCCAGTGCTGCCCGCCACCATGTGAATTCATCAGCTCTGCAGGCACAGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp TGCAAGGTCTGTGCCTGCAGAGCTGATGAATTCACATaGTGGCGGGCAGCACTGGGTATCTGCCATAGGCTC +
Preference number: 6 (lower is better)
Translates to: CKVCACRADEFT*WRAALGICHRL
Trigger: GAGCCTATGGCAGATACCCAGTGCTGCCCGCCACCATGTGAATTCATCAGCTCTGCAGGCACAGACCTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp CAGGACGTCCCCAGGGCAGAAAGTAATAGGAGCGATTaGCCTCGCCCAGCACCCCAGCACCCTATAGATAAT +
Preference number: 6 (lower is better)
Translates to: QDVPRAESNRSD*PRPAPQHPIDN
Trigger: ATTATCTATAGGGTGCTGGGGTGCTGGGCGAGGCCAATCGCTCCTATTACTTTCTGCCCTGGGGACGTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp CGTGCAGGCTTGAAGCAGCAGGATACTGATCACTACTaGCTCTGCTTTGAGGGGTCACGGTCACGGCTGTCA +
Preference number: 6 (lower is better)
Translates to: RAGLKQQDTDHY*LCFEGSRSRLS
Trigger: TGACAGCCGTGACCGTGACCCCTCAAAGCAGAGCCAGTAGTGATCAGTATCCTGCTGCTTCAAGCCTGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp GCAGATGTGCGGAGAGGAGAAGAGGACCGTGCAGGCTaGAAGCAGCAGGATACTGATCACTACTGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: ADVRRGEEDRAG*KQQDTDHYWLC
Trigger: GCAGAGCCAGTAGTGATCAGTATCCTGCTGCTTCAAGCCTGCACGGTCCTCTTCTCCTCTCCGCACATCTGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp TGTCTATTCACCACTCTGCTTGGAGAAACCATGCACCACTTCCACTaGCTGCTCAGCGATCTTCTCGGAAGGGCAAAGGGCCAGCCTCCC +
Preference number: 6 (lower is better)
Translates to: CLFTTLLGETMHHFH*LLSDLLGRAKGQPP
Trigger: GGGAGGCTGGCCCTTTGCCCTTCCGAGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAGTGGTGAATAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS CAA 90 bp GATTGGCCTCGCCCAGCACCCCAGCACCCTATAGATAATAGGTGCTaGCTAAACAGTTGCAGGAAGCACAGGCAGATGGGGCATCAGAGG +
Preference number: 6 (lower is better)
Translates to: DWPRPAPQHPIDNRC*LNSCRKHRQMGHQR
Trigger: CCTCTGATGCCCCATCTGCCTGTGCTTCCTGCAACTGTTTAGCAAGCACCTATTATCTATAGGGTGCTGGGGTGCTGGGCGAGGCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp CCAGCCAACTTCCCTCTGTTTACCAGGCCCCAAACTATTCTGGGTTaGACAGGCATGCAGATGTGCGGAGAGGAGAAGAGGACCGTGCAG +
Preference number: 6 (lower is better)
Translates to: PANFPLFTRPQTILG*TGMQMCGEEKRTVQ
Trigger: CTGCACGGTCCTCTTCTCCTCTCCGCACATCTGCATGCCTGTCAAACCCAGAATAGTTTGGGGCCTGGTAAACAGAGGGAAGTTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp GTCACTCTCATCTCCAGGGAGGCAAGGTTCAGCGTGTaGCTCCAAGATCAACCAAAGCCTTCAGAGCCCTGG +
Preference number: 6 (lower is better)
Translates to: VTLISREARFSV*LQDQPKPSEPW
Trigger: CCAGGGCTCTGAAGGCTTTGGTTGATCTTGGAGTCACACGCTGAACCTTGCCTCCCTGGAGATGAGAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp AAGATAAGCAAATGGGGACGTGAAGCCTCAGGAACCTaGCCTGCGCTTGCACACCACGGTTTGTTGGGCACC +
Preference number: 6 (lower is better)
Translates to: KISKWGREASGT*PALAHHGLLGT
Trigger: GGTGCCCAACAAACCGTGGTGTGCAAGCGCAGGTCAGGTTCCTGAGGCTTCACGTCCCCATTTGCTTATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp CAGATGTGCGGAGAGGAGAAGAGGACCGTGCAGGCTTaGAGCAGCAGGATACTGATCACTACTGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: QMCGEEKRTVQA*SSRILITTGSA
Trigger: AGCAGAGCCAGTAGTGATCAGTATCCTGCTGCTTCAAGCCTGCACGGTCCTCTTCTCCTCTCCGCACATCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp ACACTGTGTTTTAAAACAAGCCTGTGTGGCGAGGGATaGAGGCCGGGCAGCAAACCCGTGAGCAAGCTTGGA +
Preference number: 6 (lower is better)
Translates to: TLCFKTSLCGEG*RPGSKPVSKLG
Trigger: TCCAAGCTTGCTCACGGGTTTGCTGCCCGGCCTCCATCCCTCGCCACACAGGCTTGTTTTAAAACACAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp AAAATCCTTCGTTTAAAGAGGCAGCACAGGGCTTTATaGGCGCCCTCACGCACAGGCACTCTGCCTAGGAGG +
Preference number: 6 (lower is better)
Translates to: KILRLKRQHRAL*APSRTGTLPRR
Trigger: CCTCCTAGGCAGAGTGCCTGTGCGTGAGGGCGCCCATAAAGCCCTGTGCTGCCTCTTTAAACGAAGGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp GGCCCTAAGCACAGAGCACGAAAGGGGGACAGTTCATaGGATGATACCAAGTCGGTGTACAGCAGACAGCAC +
Preference number: 6 (lower is better)
Translates to: GPKHRARKGDSS*DDTKSVYSRQH
Trigger: GTGCTGTCTGCTGTACACCGACTTGGTATCATCCCATGAACTGTCCCCCTTTCGTGCTCTGTGCTTAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp ACCACTCTGCTTGGAGAAACCATGCACCACTTCCACTaGCTGCTCAGCGATCTTCTCGGAAGGGCAAAGGGC +
Preference number: 6 (lower is better)
Translates to: TTLLGETMHHFH*LLSDLLGRAKG
Trigger: GCCCTTTGCCCTTCCGAGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS CAA 72 bp AAGGTGCGGGTGACTTGCACCCCTCGAATGAGGCCTTaGCACATCACGAGCCAGGAAGGTATTAGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: KVRVTCTPRMRP*HITSQEGIRSL
Trigger: CAGGCTTCTAATACCTTCCTGGCTCGTGATGTGCAAAGGCCTCATTCGAGGGGTGCAAGTCACCCGCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp CGCCCAGCACCCCAGCACCCTATAGATAATAGGTGCTaGCTAAACAGTTGCAGGAAGCACAGGCAGATGGGG +
Preference number: 6 (lower is better)
Translates to: RPAPQHPIDNRC*LNSCRKHRQMG
Trigger: CCCCATCTGCCTGTGCTTCCTGCAACTGTTTAGCAAGCACCTATTATCTATAGGGTGCTGGGGTGCTGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp AACCCCATGAAGGTGCGGGTGACTTGCACCCCTCGAATGAGGCCTTaGCACATCACGAGCCAGGAAGGTATTAGAAGCCTGGTCCTTACT +
Preference number: 6 (lower is better)
Translates to: NPMKVRVTCTPRMRP*HITSQEGIRSLVLT
Trigger: AGTAAGGACCAGGCTTCTAATACCTTCCTGGCTCGTGATGTGCAAAGGCCTCATTCGAGGGGTGCAAGTCACCCGCACCTTCATGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp GAAAGCCTAGCTGTAAAGGTGGTAAGACAGGTGACCTaGCAGTCAAGATGCACCGGCTCCCCATACCCTTCC +
Preference number: 6 (lower is better)
Translates to: ESLAVKVVRQVT*QSRCTGSPYPS
Trigger: GGAAGGGTATGGGGAGCCGGTGCATCTTGACTGTCAGGTCACCTGTCTTACCACCTTTACAGCTAGGCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp CCTCGGTCGTCACCATTATCGGGTTCCTCATCCATGTaGTTCCAGATCCCAGCACACTTGCCAAACCCAGTG +
Preference number: 6 (lower is better)
Translates to: PRSSPLSGSSSM*FQIPAHLPNPV
Trigger: CACTGGGTTTGGCAAGTGTGCTGGGATCTGGAATCACATGGATGAGGAACCCGATAATGGTGACGACCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GGGATTGGAAGGCACCCCCAAGTTCAATGGGCCTTCTaGTCTACCTCAGAGACTCCTGGTCCACGAATTATG +
Preference number: 6 (lower is better)
Translates to: GIGRHPQVQWAF*STSETPGPRIM
Trigger: CATAATTCGTGGACCAGGAGTCTCTGAGGTAGAGCAGAAGGCCCATTGAACTTGGGGGTGCCTTCCAATCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp TGGTCAACAAAGAAGAAGACCCCGGTGTGTCCAACGTaGGACCGGACTTTTACAGATGAGCATGCGCTCCCA +
Preference number: 6 (lower is better)
Translates to: WSTKKKTPVCPT*DRTFTDEHALP
Trigger: TGGGAGCGCATGCTCATCTGTAAAAGTCCGGTCCCACGTTGGACACACCGGGGTCTTCTTCTTTGTTGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp ACAGAGGAGGAGGAAGCCCCAAGCTTTCAACAACCCTaGCTTTATGAGCGGTGGGATCAGACTCTGGCTTGT +
Preference number: 6 (lower is better)
Translates to: TEEEEAPSFQQP*LYERWDQTLAC
Trigger: ACAAGCCAGAGTCTGATCCCACCGCTCATAAAGCCAGGGTTGTTGAAAGCTTGGGGCTTCCTCCTCCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp GGCAGCCTTTGGCACATGGACTTAGAAACCAGAAGCTaGGATGGAGCCGGCTGGGTTCAGAAATTGCCACTA +
Preference number: 6 (lower is better)
Translates to: GSLWHMDLETRS*DGAGWVQKLPL
Trigger: TAGTGGCAATTTCTGAACCCAGCCGGCTCCATCTCAGCTTCTGGTTTCTAAGTCCATGTGCCAAAGGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320285.9
ENST00000366905.3
ENST00000366911.9
CDS TCA 72 bp TCCCTCTGTTTACCAGGCCCCAAACTATTCTGGGTTTaGCAGGCATGCAGATGTGCGGAGAGGAGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: SLCLPGPKLFWV*QACRCAERRRG
Trigger: TCCTCTTCTCCTCTCCGCACATCTGCATGCCTGTCAAACCCAGAATAGTTTGGGGCCTGGTAAACAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp CTGAAGAGACCCAGTTCCAAAGGCATGCAAGCTACGTaGAAGAGGTCAAACCCTAACAGCCCAAAGCGTTCG +
Preference number: 6 (lower is better)
Translates to: LKRPSSKGMQAT*KRSNPNSPKRS
Trigger: CGAACGCTTTGGGCTGTTAGGGTTTGACCTCTTGCACGTAGCTTGCATGCCTTTGGAACTGGGTCTCTTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000436279.1
ENST00000624499.2
CDS CCA 72 bp ATAATAGCTGCTGCTCATGGTGTGCTTGCCAGGGCCTaGCGCTACCCAGACACTGAACGATCATGCTCTTAT +
Preference number: 6 (lower is better)
Translates to: IIAAAHGVLARA*RYPDTERSCSY
Trigger: ATAAGAGCATGATCGTTCAGTGTCTGGGTAGCGCCAGGCCCTGGCAAGCACACCATGAGCAGCAGCTATTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp TTCCCTCTGTTTACCAGGCCCCAAACTATTCTGGGTTaGACAGGCATGCAGATGTGCGGAGAGGAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: FPLFTRPQTILG*TGMQMCGEEKR
Trigger: CCTCTTCTCCTCTCCGCACATCTGCATGCCTGTCAAACCCAGAATAGTTTGGGGCCTGGTAAACAGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp GTGACACAGGCTCAACCGCTACACGCTGCAGTGTGTTaGAGACGACAAAAGTCAACTGAAGAGACCCAGTTC +
Preference number: 6 (lower is better)
Translates to: VTQAQPLHAAVC*RRQKSTEETQF
Trigger: GAACTGGGTCTCTTCAGTTGACTTTTGTCGTCTTCAACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436279.1
ENST00000624499.2
CDS TCA 72 bp TACCTGAGTACCGCAGATGACTCTGATTCAGCTATGTaGCACAGGCTCAACCGCTACACGCTGCAGTGTGTT +
Preference number: 6 (lower is better)
Translates to: YLSTADDSDSAM*HRLNRYTLQCV
Trigger: AACACACTGCAGCGTGTAGCGGTTGAGCCTGTGTCACATAGCTGAATCAGAGTCATCTGCGGTACTCAGGTA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp ATCAGCGCTCCCGCCCTTATGCTCAGAGTTGTAAAGTaGTCATGGATTCGGAAGCCTTTGGGAGCAAAACCC +
Preference number: 6 (lower is better)
Translates to: ISAPALMLRVVK*SWIRKPLGAKP
Trigger: GGGTTTTGCTCCCAAAGGCTTCCGAATCCATGATCACTTTACAACTCTGAGCATAAGGGCGGGAGCGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp GGAGGAAGCCCCAAGCTTTCAACAACCCTGGCTTTATaGGCGGTGGGATCAGACTCTGGCTTGTTAAAGACA +
Preference number: 6 (lower is better)
Translates to: GGSPKLSTTLAL*AVGSDSGLLKT
Trigger: TGTCTTTAACAAGCCAGAGTCTGATCCCACCGCTCATAAAGCCAGGGTTGTTGAAAGCTTGGGGCTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp AAAGGAGAAAACAGTGGGCAGGAGGCTATCTTCATCTaGCTCCAGGAACCAGACCCGTCTAGTTCCCTATGT +
Preference number: 6 (lower is better)
Translates to: KGENSGQEAIFI*LQEPDPSSSLC
Trigger: ACATAGGGAACTAGACGGGTCTGGTTCCTGGAGGCAGATGAAGATAGCCTCCTGCCCACTGTTTTCTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp AAGGTATTAGAAGCCTGGTCCTTACTGCAGCTGGTCTaGGTCGTTTTAGGATGGTCAGGGTCCTGTTTCTGG +
Preference number: 6 (lower is better)
Translates to: KVLEAWSLLQLV*VVLGWSGSCFW
Trigger: CCAGAAACAGGACCCTGACCATCCTAAAACGACCCAGACCAGCTGCAGTAAGGACCAGGCTTCTAATACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp AGACTCTGGCTTGTTAAAGACACTGCCAGAGGATCCTaGTCAACAAAGAAGAAGACCCCGGTGTGTCCAACG +
Preference number: 6 (lower is better)
Translates to: RLWLVKDTARGS*STKKKTPVCPT
Trigger: CGTTGGACACACCGGGGTCTTCTTCTTTGTTGACCAGGATCCTCTGGCAGTGTCTTTAACAAGCCAGAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp AACAACCCTGGCTTTATGAGCGGTGGGATCAGACTCTaGCTTGTTAAAGACACTGCCAGAGGATCCTGGTCA +
Preference number: 6 (lower is better)
Translates to: NNPGFMSGGIRL*LVKDTARGSWS
Trigger: TGACCAGGATCCTCTGGCAGTGTCTTTAACAAGCCAGAGTCTGATCCCACCGCTCATAAAGCCAGGGTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp TGCCCCCAACATCTTCCAGGGGAAAGAGCAGAAGCTTaGAAAGCAGACTTAGGAGCTATTGTCCTCGGGCAA +
Preference number: 6 (lower is better)
Translates to: CPQHLPGERAEA*KADLGAIVLGQ
Trigger: TTGCCCGAGGACAATAGCTCCTAAGTCTGCTTTCAAAGCTTCTGCTCTTTCCCCTGGAAGATGTTGGGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp TTCTTGCCAACTGCAGTAGCACAAGTGTGCCTGGCCTTGCTCACATaGCATTCCTTTCTCTTGCTTTCTGCCTTCTCTGATGCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: FLPTAVAQVCLALLT*HSFLLLSAFSDAER
Trigger: CCTCTCAGCATCAGAGAAGGCAGAAAGCAAGAGAAAGGAATGCAATGTGAGCAAGGCCAGGCACACTTGTGCTACTGCAGTTGGCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp CTTGATGTCTATTCACCACTCTGCTTGGAGAAACCATaGACCACTTCCACTTGCTGCTCAGCGATCTTCTCG +
Preference number: 6 (lower is better)
Translates to: LDVYSPLCLEKP*TTSTCCSAIFS
Trigger: CGAGAAGATCGCTGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAGTGGTGAATAGACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS CCA 72 bp CAGGAACCAGACCCGTCTAGTTCCCTATGTCCTCCATaGCCTGATAGCCTCTGTCTCCAATCTTCTATATTC +
Preference number: 6 (lower is better)
Translates to: QEPDPSSSLCPP*PDSLCLQSSIF
Trigger: GAATATAGAAGATTGGAGACAGAGGCTATCAGGCCATGGAGGACATAGGGAACTAGACGGGTCTGGTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp TTCTTGCCAACTGCAGTAGCACAAGTGTGCCTGGCCTaGCTCACATTGCATTCCTTTCTCTTGCTTTCTGCC +
Preference number: 6 (lower is better)
Translates to: FLPTAVAQVCLA*LTLHSFLLLSA
Trigger: GGCAGAAAGCAAGAGAAAGGAATGCAATGTGAGCAAGGCCAGGCACACTTGTGCTACTGCAGTTGGCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp ACACGCTGCAGTGTGTTGAAGACGACAAAAGTCAACTaGAGAGACCCAGTTCCAAAGGCATGCAAGCTACGT +
Preference number: 6 (lower is better)
Translates to: TRCSVLKTTKVN*RDPVPKACKLR
Trigger: ACGTAGCTTGCATGCCTTTGGAACTGGGTCTCTTCAGTTGACTTTTGTCGTCTTCAACACACTGCAGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436279.1
ENST00000624499.2
CDS GCA 72 bp TGTTCCCAGGTGCAAAACCTGATCTCTAAGTTCTGGTaGAAACTCTTAGGACCTTTCCTAGCCCCAGACCAA +
Preference number: 6 (lower is better)
Translates to: CSQVQNLISKFW*KLLGPFLAPDQ
Trigger: TTGGTCTGGGGCTAGGAAAGGTCCTAAGAGTTTGCACCAGAACTTAGAGATCAGGTTTTGCACCTGGGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp AGGAATTGTCCCTTGATGTCTATTCACCACTCTGCTTaGAGAAACCATGCACCACTTCCACTTGCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: RNCPLMSIHHSA*RNHAPLPLAAQ
Trigger: CTGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAGTGGTGAATAGACATCAAGGGACAATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS CCA 72 bp CATTGTTCCCAGGTGCAAAACCTGATCTCTAAGTTCTaGTGCAAACTCTTAGGACCTTTCCTAGCCCCAGAC +
Preference number: 6 (lower is better)
Translates to: HCSQVQNLISKF*CKLLGPFLAPD
Trigger: GTCTGGGGCTAGGAAAGGTCCTAAGAGTTTGCACCAGAACTTAGAGATCAGGTTTTGCACCTGGGAACAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp CTGCCTCTAAACTACAGTTTGAATTCCAGGAGACGCTaGCACCTCAGAAAGCCTAGCTGTAAAGGTGGTAAG +
Preference number: 6 (lower is better)
Translates to: LPLNYSLNSRRR*HLRKPSCKGGK
Trigger: CTTACCACCTTTACAGCTAGGCTTTCTGAGGTGCCAGCGTCTCCTGGAATTCAAACTGTAGTTTAGAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp GTGCATAACAATGGCACTGGCTGTTTCTGTGGTGTTTaGAGAAGAGAGGACTCAGGGCTTAAGGAAGCACTT +
Preference number: 6 (lower is better)
Translates to: VHNNGTGCFCGV*RREDSGLKEAL
Trigger: AAGTGCTTCCTTAAGCCCTGAGTCCTCTCTTCTCCAAACACCACAGAAACAGCCAGTGCCATTGTTATGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp AAGCGTTCGGACAGGCTCCAGCCACACAGAAAGTCAATTTCAAACTaGTGGTTGAGAACCACGATGGCATTTTCCTTCCCATACTTGAGG +
Preference number: 6 (lower is better)
Translates to: KRSDRLQPHRKSISN*WLRTTMAFSFPYLR
Trigger: CCTCAAGTATGGGAAGGAAAATGCCATCGTGGTTCTCAACCACAAGTTTGAAATTGACTTTCTGTGTGGCTGGAGCCTGTCCGAACGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320285.9
ENST00000366905.3
ENST00000436279.1
ENST00000624499.2
CDS TCA 72 bp TGCTTGTTAATGGGCCAGAGGAGGAGAGTGAAGAGCTaGATGGTGTTGATGATTAGCCCTGAGGCAATAAAG +
Preference number: 6 (lower is better)
Translates to: CLLMGQRRRVKS*MVLMISPEAIK
Trigger: CTTTATTGCCTCAGGGCTAATCATCAACACCATTCAGCTCTTCACTCTCCTCCTCTGGCCCATTAACAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320285.9
ENST00000366905.3
ENST00000366911.9
ENST00000436279.1
ENST00000624499.2
CDS GCA 72 bp CACCTGCTCTCTCTAGCTCCTTGCTTTGTGAGAATGTaGATAACAATGGCACTGGCTGTTTCTGTGGTGTTT +
Preference number: 6 (lower is better)
Translates to: HLLSLAPCFVRM*ITMALAVSVVF
Trigger: AAACACCACAGAAACAGCCAGTGCCATTGTTATGCACATTCTCACAAAGCAAGGAGCTAGAGAGAGCAGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp AAGGAATTGTCCCTTGATGTCTATTCACCACTCTGCTaGGAGAAACCATGCACCACTTCCACTTGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: KELSLDVYSPLC*EKPCTTSTCCS
Trigger: TGAGCAGCAAGTGGAAGTGGTGCATGGTTTCTCCAAGCAGAGTGGTGAATAGACATCAAGGGACAATTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437165.1
CDS CCA 72 bp AGTTCAATGGGCCTTCTGCTCTACCTCAGAGACTCCTaGTCCACGAATTATGAATGTTTGCACATTCTAAGC +
Preference number: 6 (lower is better)
Translates to: SSMGLLLYLRDS*STNYECLHILS
Trigger: GCTTAGAATGTGCAAACATTCATAATTCGTGGACCAGGAGTCTCTGAGGTAGAGCAGAAGGCCCATTGAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp TCTGCTCTACCTCAGAGACTCCTGGTCCACGAATTATaGATGTTTGCACATTCTAAGCATGAACACTACCAG +
Preference number: 6 (lower is better)
Translates to: SALPQRLLVHEL*MFAHSKHEHYQ
Trigger: CTGGTAGTGTTCATGCTTAGAATGTGCAAACATTCATAATTCGTGGACCAGGAGTCTCTGAGGTAGAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp TGGAAACTTCTAACTTCTCTTCAGCCAAAGAGCCCTTaGCAAGTGCATGTGTATGAAGAAGCTGGGGTAAAG +
Preference number: 6 (lower is better)
Translates to: WKLLTSLQPKSP*QVHVYEEAGVK
Trigger: CTTTACCCCAGCTTCTTCATACACATGCACTTGTCAAGGGCTCTTTGGCTGAAGAGAAGTTAGAAGTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp ATTTCCTCTTGGACTGTGATAGGTGAGGATGAAAAATaGCTGGTCAGGAACCTTCTTCTGTTCCTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: ISSWTVIGEDEK*LVRNLLLFLSS
Trigger: AGAGGAAAGGAACAGAAGAAGGTTCCTGACCAGGCATTTTTCATCCTCACCTATCACAGTCCAAGAGGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp TTAAGCCGCTATGTTTTGGGTCTCATCACGCTGCCATaGATAACTAATCCACATGGCTTCTTTAAGGATCTG +
Preference number: 6 (lower is better)
Translates to: LSRYVLGLITLP*ITNPHGFFKDL
Trigger: CAGATCCTTAAAGAAGCCATGTGGATTAGTTATCCATGGCAGCGTGATGAGACCCAAAACATAGCGGCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp CTCCAGCCACACAGAAAGTCAATTTCAAACTTGTGGTaGAGAACCACGATGGCATTTTCCTTCCCATACTTG +
Preference number: 6 (lower is better)
Translates to: LQPHRKSISNLW*RTTMAFSFPYL
Trigger: CAAGTATGGGAAGGAAAATGCCATCGTGGTTCTCAACCACAAGTTTGAAATTGACTTTCTGTGTGGCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320285.9
ENST00000366905.3
ENST00000436279.1
ENST00000624499.2
CDS CAA 72 bp CTTTATGACACGCTTGTTGTTTTAAGCCGCTATGTTTaGGGTCTCATCACGCTGCCATGGATAACTAATCCA +
Preference number: 6 (lower is better)
Translates to: LYDTLVVLSRYV*GLITLPWITNP
Trigger: TGGATTAGTTATCCATGGCAGCGTGATGAGACCCAAAACATAGCGGCTTAAAACAACAAGCGTGTCATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp CTTCTGCTCTACCTCAGAGACTCCTGGTCCACGAATTATGAATGTTaGCACATTCTAAGCATGAACACTACCAGAAAGTACTTACAAAGC +
Preference number: 6 (lower is better)
Translates to: LLLYLRDSWSTNYEC*HILSMNTTRKYLQS
Trigger: GCTTTGTAAGTACTTTCTGGTAGTGTTCATGCTTAGAATGTGCAAACATTCATAATTCGTGGACCAGGAGTCTCTGAGGTAGAGCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CCA 72 bp GGTCTCCTAGAGAAACCACACACAATCAACACTCACTaGACACGTATTTTGAAGGTATATCAATTGCTATCG +
Preference number: 6 (lower is better)
Translates to: GLLEKPHTINTH*TRILKVYQLLS
Trigger: CGATAGCAATTGATATACCTTCAAAATACGTGTCCAGTGAGTGTTGATTGTGTGTGGTTTCTCTAGGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp TACCTCAGAGACTCCTGGTCCACGAATTATGAATGTTaGCACATTCTAAGCATGAACACTACCAGAAAGTAC +
Preference number: 6 (lower is better)
Translates to: YLRDSWSTNYEC*HILSMNTTRKY
Trigger: GTACTTTCTGGTAGTGTTCATGCTTAGAATGTGCAAACATTCATAATTCGTGGACCAGGAGTCTCTGAGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS GCA 72 bp GAGAGAATAAATCCACAAAGCTGTAACTCAGATCTCTaGCCAAGTTCTCCACATCAGAGAATGATAGTTACT +
Preference number: 6 (lower is better)
Translates to: ERINPQSCNSDL*PSSPHQRMIVT
Trigger: AGTAACTATCATTCTCTGATGTGGAGAACTTGGGCAGAGATCTGAGTTACAGCTTTGTGGATTTATTCTCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp CGTATTTTGAAGGTATATCAATTGCTATCGTTGTCATaGTCGAAAATCCTTCGTTTAAAGAGGCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: RILKVYQLLSLS*SKILRLKRQHR
Trigger: CCTGTGCTGCCTCTTTAAACGAAGGATTTTCGATCATGACAACGATAGCAATTGATATACCTTCAAAATACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS TCA 72 bp AACCACACACAATCAACACTCACTGGACACGTATTTTaGAGGTATATCAATTGCTATCGTTGTCATGATCGA +
Preference number: 6 (lower is better)
Translates to: NHTQSTLTGHVF*RYINCYRCHDR
Trigger: TCGATCATGACAACGATAGCAATTGATATACCTTCAAAATACGTGTCCAGTGAGTGTTGATTGTGTGTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 90 bp ATAAAAAGCAGTTTATTAGGACCATTTCATCAAGTAGAAACTCTGTaGATTCTTCTGCAAGTTCTGAATGACCAGGAGCAAAAAGACAAG +
Preference number: 6 (lower is better)
Translates to: IKSSLLGPFHQVETL*ILLQVLNDQEQKDK
Trigger: CTTGTCTTTTTGCTCCTGGTCATTCAGAACTTGCAGAAGAATCAACAGAGTTTCTACTTGATGAAATGGTCCTAATAAACTGCTTTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366905.3
CDS TCA 72 bp CACAGCATTAGTTGTTTGGGTGTTCACAGTAATGAGTaGAGTCCTATAAATAGAATATCACCGATGAAATCA +
Preference number: 6 (lower is better)
Translates to: HSISCLGVHSNE*SPINRISPMKS
Trigger: TGATTTCATCGGTGATATTCTATTTATAGGACTTCACTCATTACTGTGAACACCCAAACAACTAATGCTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2
CDS CAA 72 bp TTACTAGAATGTTTGCTCTTGTTCCTAGAAATATATTaGCACACACACACACGTGTACACACAAGAAGATAT +
Preference number: 6 (lower is better)
Translates to: LLECLLLFLEIY*HTHTRVHTRRY
Trigger: ATATCTTCTTGTGTGTACACGTGTGTGTGTGTGCAAATATATTTCTAGGAACAAGAGCAAACATTCTAGTAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000624499.2