RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGPAT3 (Homo sapiens)

Ensembl gene IDs: ENSG00000160216

Ensembl transcript IDs: ENST00000291572.13, ENST00000327505.6, ENST00000398058.5, ENST00000398061.5, ENST00000398063.6, ENST00000422850.5, ENST00000445582.5, ENST00000448287.5, ENST00000448845.1, ENST00000457068.5, ENST00000467358.5, ENST00000474735.1, ENST00000479117.5, ENST00000481319.1, ENST00000484865.1, ENST00000497909.1, ENST00000498670.1, ENST00000546158.1

Found 1277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGTGCTCTGAGCAGGTGTGCACAGGTGGCGTCCCGCACACGCCCTaGGAGCACGGCCCCCACAGACCCGGGGCCCGGCAGCGCCTCCAT +
Preference number: 1 (lower is better)
Translates to: PCSEQVCTGGVPHTP*EHGPHRPGARQRLH
Trigger: ATGGAGGCGCTGCCGGGCCCCGGGTCTGTGGGGGCCGTGCTCTCAGGGCGTGTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCACGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 90 bp CCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCACC +
Preference number: 1 (lower is better)
Translates to: PREASPAGPTSHGRA*RCWDPALWEAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR CCA 90 bp GGGTGGGCCTGGGCCCTCCCGCCTGGGAGCCTCCAGTGTGGCGCCTaGCTCTGGGTGGGTAACAGGAGCTACAGGCCAGCAATGCCCTTC +
Preference number: 1 (lower is better)
Translates to: GWAWALPPGSLQCGA*LWVGNRSYRPAMPF
Trigger: GAAGGGCATTGCTGGCCTGTAGCTCCTGTTACCCACCCAGAGCCAGGCGCCACACTGGAGGCTCCCAGGCGGGAGGGCCCAGGCCCACCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 90 bp CGGGGGAGTGGACATGCTGTAGGGAGAAGCATCCCTCGCTCGGCGTaGGCCAGGGGCTCGCTGCAAGGCCAAGGGAGCCAGCATGACCGG +
Preference number: 1 (lower is better)
Translates to: RGSGHAVGRSIPRSA*ARGSLQGQGSQHDR
Trigger: CCGGTCATGCTGGCTCCCTTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTACAGCATGTCCACTCCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 90 bp AAGATGGGCAGGAGACCCCATGACACCTGGCACCTGGGCCTAAGCTaGGAGGCCAGCGGCGTCCCCAGGAGACCACGGCCCAGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: KMGRRPHDTWHLGLS*EASGVPRRPRPRLG
Trigger: TCCCAGCCTGGGCCGTGGTCTCCTGGGGACGCCGCTGGCCTCCCAGCTTAGGCCCAGGTGCCAGGTGTCATGGGGTCTCCTGCCCATCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 90 bp CGGCAGGATGGCCTCCAAGGAAACAGAGCCCGTGGGAGTGGGCTCTaGAGGTGGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGG +
Preference number: 1 (lower is better)
Translates to: RQDGLQGNRARGSGL*RWVAPWDRSAWWPW
Trigger: CCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAGAGCCCACTCCCACGGGCTCTGTTTCCTTGGAGGCCATCCTGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR GCA 90 bp CTGCAAGGCCAAGGGAGCCAGCATGACCGGCCGAGCGCTGCCCTCTaGTCTGCCTGGACTCTCAGAGACGTCCAGGAGGTAGGGAGCTGG +
Preference number: 1 (lower is better)
Translates to: LQGQGSQHDRPSAAL*SAWTLRDVQEVGSW
Trigger: CCAGCTCCCTACCTCCTGGACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGCAGCGCTCGGCCGGTCATGCTGGCTCCCTTGGCCTTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 90 bp TGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTaGGCAGGTGTGCACAGGTGGCGTCCCGCACACGCCCTGAGAGCA +
Preference number: 1 (lower is better)
Translates to: WFRWSAPSPLRGAVL*AGVHRWRPAHALRA
Trigger: TGCTCTCAGGGCGTGTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 90 bp GCCTCCAAGGAAACAGAGCCCGTGGGAGTGGGCTCTGAAGGTGGGTaGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTTG +
Preference number: 1 (lower is better)
Translates to: ASKETEPVGVGSEGG*PHGTGVPGGPGFPL
Trigger: CAAGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAGAGCCCACTCCCACGGGCTCTGTTTCCTTGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR TCA 90 bp CCCAGGACAGGGCAGAGTGAGGGCTCCGACTTCGAGGAATGGACCTaGCGTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGG +
Preference number: 1 (lower is better)
Translates to: PRTGQSEGSDFEEWT*RSCRCAYHYGRPPR
Trigger: CCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAACGTCAGGTCCATTCCTCGAAGTCGGAGCCCTCACTCTGCCCTGTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 90 bp AGCAATGGCATCCTTGGGAAGATGGGCAGGAGACCCCATGACACCTaGCACCTGGGCCTAAGCTGGGAGGCCAGCGGCGTCCCCAGGAGA +
Preference number: 1 (lower is better)
Translates to: SNGILGKMGRRPHDT*HLGLSWEASGVPRR
Trigger: TCTCCTGGGGACGCCGCTGGCCTCCCAGCTTAGGCCCAGGTGCCAGGTGTCATGGGGTCTCCTGCCCATCTTCCCAAGGATGCCATTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 90 bp CAAGGACTGGGTGCAGAGGGCATCAGCGATGCCAGGCCTAGAATGTaGCTCACCCCGACAGTGGCCAGCACGGACTGTGGGCTACAGAGT +
Preference number: 1 (lower is better)
Translates to: QGLGAEGISDARPRM*LTPTVASTDCGLQS
Trigger: ACTCTGTAGCCCACAGTCCGTGCTGGCCACTGTCGGGGTGAGGCACATTCTAGGCCTGGCATCGCTGATGCCCTCTGCACCCAGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 90 bp TTCACCACTACACAAGAGCTACTCGCGCTCGGGCAGGCGCACACCTaGCTGTGTACACAGGTCCTCGCACAGCACGGCAAACGCAGCCAG +
Preference number: 1 (lower is better)
Translates to: FTTTQELLALGQAHT*LCTQVLAQHGKRSQ
Trigger: CTGGCTGCGTTTGCCGTGCTGTGCGAGGACCTGTGTACACAGGCAGGTGTGCGCCTGCCCGAGCGCGAGTAGCTCTTGTGTAGTGGTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 90 bp GGTAACAGGAGCTACAGGCCAGCAATGCCCTTCCTGTCCTCGGCCTaGCTCAAGGACTGGGTGCAGAGGGCATCAGCGATGCCAGGCCTA +
Preference number: 1 (lower is better)
Translates to: GNRSYRPAMPFLSSA*LKDWVQRASAMPGL
Trigger: TAGGCCTGGCATCGCTGATGCCCTCTGCACCCAGTCCTTGAGCCAGGCCGAGGACAGGAAGGGCATTGCTGGCCTGTAGCTCCTGTTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 90 bp GCGTGTCTCGCATGGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTaGCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGCAGGTGTGCA +
Preference number: 1 (lower is better)
Translates to: ACLAWCRWSHLVSLV*PFTPARSRALSRCA
Trigger: TGCACACCTGCTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR GCA 90 bp GGCAGGCAGGCTTTTCGGGCTGGCCGTTTGAACCCTGAGCCTAGGTaGAGTGCAAGGGCTAGAAGCACATCGCGCCGTGGAGCACTAGTA +
Preference number: 1 (lower is better)
Translates to: GRQAFRAGRLNPEPR*SARARSTSRRGALV
Trigger: TACTAGTGCTCCACGGCGCGATGTGCTTCTAGCCCTTGCACTGCACCTAGGCTCAGGGTTCAAACGGCCAGCCCGAAAAGCCTGCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 90 bp CCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTaGAGACTTCACCTGACAGGCCTTCTGAATTCTTTACTCTTGGCT +
Preference number: 1 (lower is better)
Translates to: PRARVEMLGPCAVGG*RLHLTGLLNSLLLA
Trigger: AGCCAAGAGTAAAGAATTCAGAAGGCCTGTCAGGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR CCA 90 bp AACAGTGTCTGCAAGCGTGTCTCGCATGGTGTCGTTGGTCTCATCTaGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTC +
Preference number: 1 (lower is better)
Translates to: NSVCKRVSHGVVGLI*FRWSAPSPLRGAVL
Trigger: GAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGACACGCTTGCAGACACTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 90 bp AAGCACAAGCTAAGCTGTGAGATGGGAAGGAAACCAGATGAGGTGTaGCCCCTGCGCCTGGGCCTCCGTCTCCACTCTAACCTAGGGGCT +
Preference number: 1 (lower is better)
Translates to: KHKLSCEMGRKPDEV*PLRLGLRLHSNLGA
Trigger: AGCCCCTAGGTTAGAGTGGAGACGGAGGCCCAGGCGCAGGGGTCACACCTCATCTGGTTTCCTTCCCATCTCACAGCTTAGCTTGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 90 bp GTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGATaGAGACAGCAATGGCATCCTTGGGAAGATGGGCAGGAGACCCCA +
Preference number: 1 (lower is better)
Translates to: VAEYQTTSVSHGGRR*RQQWHPWEDGQETP
Trigger: TGGGGTCTCCTGCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 90 bp GGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTTaGAGACATCTATGCAGACTGGAAACGAAGAAACAGAAGGAGGCA +
Preference number: 1 (lower is better)
Translates to: GGPMGQECLVALVSP*RHLCRLETKKQKEA
Trigger: TGCCTCCTTCTGTTTCTTCGTTTCCAGTCTGCATAGATGTCTCCAAGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR TCA 90 bp TCAATTTCCCCTCCCAGAAAGCAACTCGTAGGGAAGGGAGGGCCTTaGAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCCG +
Preference number: 1 (lower is better)
Translates to: SISPPRKQLVGKGGP*KVPSAGWPPRKQSP
Trigger: CGGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGCCCTCCCTTCCCTACGAGTTGCTTTCTGGGAGGGGAAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR GCA 90 bp ACTGCGCTTCCTGAGGACAGGGACCTTAAAGCACCTCACATAGGGTaGGCGTCTGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCT +
Preference number: 1 (lower is better)
Translates to: TALPEDRDLKAPHIG*ASGTLSPSTRQPVS
Trigger: AGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCAGACGCGCACCCTATGTGAGGTGCTTTAAGGTCCCTGTCCTCAGGAAGCGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 90 bp TGCCTCACCCCGACAGTGGCCAGCACGGACTGTGGGCTACAGAGTTaGTTCAGCCTGAGCACTCAGCCTGAATTTGGACATAACATCAAC +
Preference number: 1 (lower is better)
Translates to: CLTPTVASTDCGLQS*FSLSTQPEFGHNIN
Trigger: GTTGATGTTATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTCCGTGCTGGCCACTGTCGGGGTGAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 90 bp AATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAAGATTCTCATaGCACGGTGCGCGAAAGGGAGTCGGGACAGGCAAGGCAGAGAGA +
Preference number: 1 (lower is better)
Translates to: NAQQYRNEQREERFS*HGARKGVGTGKAER
Trigger: TCTCTCTGCCTTGCCTGTCCCGACTCCCTTTCGCGCACCGTGGCATGAGAATCTTTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 90 bp GGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTTGGAGACATCTATaGAGACTGGAAACGAAGAAACAGAAGGAGGCACGGAGTCGCTTT +
Preference number: 1 (lower is better)
Translates to: GQECLVALVSPWRHL*RLETKKQKEARSRF
Trigger: AAAGCGACTCCGTGCCTCCTTCTGTTTCTTCGTTTCCAGTCTGCATAGATGTCTCCAAGGGGAAACCAGGGCCACCAGGCACTCCTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR TCA 90 bp AGTGAGTCAGTGAATGGCATGGATCTAAACACACATGGAGACGGATaGGCAGCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGT +
Preference number: 1 (lower is better)
Translates to: SESVNGMDLNTHGDG*AACGMRKVQENLWG
Trigger: ACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTCATCCGTCTCCATGTGTGTTTAGATCCATGCCATTCACTGACTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 90 bp CCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTaGGGAAAGATTCTCATGCCACGGTGCGCGAAAGGGAGTCGGGAC +
Preference number: 1 (lower is better)
Translates to: PSNQHQCSAIPQRTA*GKILMPRCAKGSRD
Trigger: GTCCCGACTCCCTTTCGCGCACCGTGGCATGAGAATCTTTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 90 bp CCAGGATCTGACAGCCATGAGAGCGACAAAGGAGCTTTAGGTGCATaGAGAACTCTGCATTTCACTGAGTTCTCAGGGGCCCATCCACTT +
Preference number: 1 (lower is better)
Translates to: PGSDSHESDKGALGA*RTLHFTEFSGAHPL
Trigger: AAGTGGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTCGCTCTCATGGCTGTCAGATCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 90 bp GGAAGCACATTTCCAAAACAACAGTGTCTGCAAGCGTGTCTCGCATaGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACC +
Preference number: 1 (lower is better)
Translates to: GSTFPKQQCLQACLA*CRWSHLVSLVCPFT
Trigger: GGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGACACGCTTGCAGACACTGTTGTTTTGGAAATGTGCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 90 bp AGTGCCTGGTGGCCCTGGTTTCCCCTTGGAGACATCTATGCAGACTaGAAACGAAGAAACAGAAGGAGGCACGGAGTCGCTTTCTCTTAT +
Preference number: 1 (lower is better)
Translates to: SAWWPWFPLGDIYAD*KRRNRRRHGVAFSY
Trigger: ATAAGAGAAAGCGACTCCGTGCCTCCTTCTGTTTCTTCGTTTCCAGTCTGCATAGATGTCTCCAAGGGGAAACCAGGGCCACCAGGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR TCA 90 bp CGACAGTGGCCAGCACGGACTGTGGGCTACAGAGTTGCTTCAGCCTaGGCACTCAGCCTGAATTTGGACATAACATCAACTGAATTAAGC +
Preference number: 1 (lower is better)
Translates to: RQWPARTVGYRVASA*ALSLNLDITSTELS
Trigger: GCTTAATTCAGTTGATGTTATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTCCGTGCTGGCCACTGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 90 bp TCACAACAGGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTaGGTGAAACACACAGCTGGGTCCAACCACGGCTTTTCCTTCAAA +
Preference number: 1 (lower is better)
Translates to: SQQAWTAWQQLLNCT*VKHTAGSNHGFSFK
Trigger: TTTGAAGGAAAAGCCGTGGTTGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCCTGTTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 90 bp AACAGGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTaGAACACACAGCTGGGTCCAACCACGGCTTTTCCTTCAAATCAA +
Preference number: 1 (lower is better)
Translates to: NRHGQPGNSYSIARE*NTQLGPTTAFPSNQ
Trigger: TTGATTTGAAGGAAAAGCCGTGGTTGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 90 bp AGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCTaGGTCCAACCACGGCTTTTCCTTCAAATCAACATCAATGCTCAG +
Preference number: 1 (lower is better)
Translates to: SLATATQLHVSETHS*VQPRLFLQININAQ
Trigger: CTGAGCATTGATGTTGATTTGAAGGAAAAGCCGTGGTTGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 90 bp CGATGGCAGATTTTCAATCATAGAAAAAGAAGCCAGTGGCTGTCATaGGCACTCAGGTCAATGGTTTGTGTGGGTTCTCCAGAGAGAGAG +
Preference number: 1 (lower is better)
Translates to: RWQIFNHRKRSQWLS*ALRSMVCVGSPERE
Trigger: CTCTCTCTCTGGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTTTTTCTATGATTGAAAATCTGCCATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 90 bp AACAGTCAGCGATGGCAGATTTTCAATCATAGAAAAAGAAGCCAGTaGCTGTCATGCGCACTCAGGTCAATGGTTTGTGTGGGTTCTCCA +
Preference number: 1 (lower is better)
Translates to: NSQRWQIFNHRKRSQ*LSCALRSMVCVGSP
Trigger: TGGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTTTTTCTATGATTGAAAATCTGCCATCGCTGACTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 90 bp CCCTGTATACAATGGGTCCCTTTGAAACTGGCCAACAGTCAGCGATaGCAGATTTTCAATCATAGAAAAAGAAGCCAGTGGCTGTCATGC +
Preference number: 1 (lower is better)
Translates to: PCIQWVPLKLANSQR*QIFNHRKRSQWLSC
Trigger: GCATGACAGCCACTGGCTTCTTTTTCTATGATTGAAAATCTGCCATCGCTGACTGTTGGCCAGTTTCAAAGGGACCCATTGTATACAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR TCA 90 bp GAGCGACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTaGGTTCTCAGGGGCCCATCCACTTTAAAAACAGATGTACGTATT +
Preference number: 1 (lower is better)
Translates to: ERQRSFRCMENSAFH*VLRGPSTLKTDVRI
Trigger: AATACGTACATCTGTTTTTAAAGTGGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTCGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 90 bp ATTGTCATTACACAGCTTCAAATTCTAAGACAACTCAATGATCTTTaGAAAGCGTACGCTGCTGTTGCCTGGGCCGGCGACACCAATGTC +
Preference number: 1 (lower is better)
Translates to: IVITQLQILRQLNDL*KAYAAVAWAGDTNV
Trigger: GACATTGGTGTCGCCGGCCCAGGCAACAGCAGCGTACGCTTTTCAAAGATCATTGAGTTGTCTTAGAATTTGAAGCTGTGTAATGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 90 bp AAAGAAGCCAGTGGCTGTCATGCGCACTCAGGTCAATGGTTTGTGTaGGTTCTCCAGAGAGAGAGATTTTCCTTTACAGTTACAGTACTT +
Preference number: 1 (lower is better)
Translates to: KEASGCHAHSGQWFV*VLQRERFSFTVTVL
Trigger: AAGTACTGTAACTGTAAAGGAAAATCTCTCTCTCTGGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 90 bp ATCATAGAAAAAGAAGCCAGTGGCTGTCATGCGCACTCAGGTCAATaGTTTGTGTGGGTTCTCCAGAGAGAGAGATTTTCCTTTACAGTT +
Preference number: 1 (lower is better)
Translates to: IIEKEASGCHAHSGQ*FVWVLQRERFSFTV
Trigger: AACTGTAAAGGAAAATCTCTCTCTCTGGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTTTTTCTATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 90 bp GTTTGTAAGAATGCCACCATTATCCCTGAATTAACAAGCAGCCAGTaGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACT +
Preference number: 1 (lower is better)
Translates to: VCKNATIIPELTSSQ*RVFMIKLNSCVHPT
Trigger: AGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTGGCTGCTTGTTAATTCAGGGATAATGGTGGCATTCTTACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 90 bp TACAAAAGGAAACATCCGTATAATACATTTGCACCCTGTATACAATaGGTCCCTTTGAAACTGGCCAACAGTCAGCGATGGCAGATTTTC +
Preference number: 1 (lower is better)
Translates to: YKRKHPYNTFAPCIQ*VPLKLANSQRWQIF
Trigger: GAAAATCTGCCATCGCTGACTGTTGGCCAGTTTCAAAGGGACCCATTGTATACAGGGTGCAAATGTATTATACGGATGTTTCCTTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR TCA 90 bp AACATCCGTATAATACATTTGCACCCTGTATACAATGGGTCCCTTTaGAACTGGCCAACAGTCAGCGATGGCAGATTTTCAATCATAGAA +
Preference number: 1 (lower is better)
Translates to: NIRIIHLHPVYNGSL*NWPTVSDGRFSIIE
Trigger: TTCTATGATTGAAAATCTGCCATCGCTGACTGTTGGCCAGTTTCAAAGGGACCCATTGTATACAGGGTGCAAATGTATTATACGGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR TCA 90 bp AGAGAGATTTTCCTTTACAGTTACAGTACTTGCTGGCGATCTTGCTaGTTAAAAGGCCAGTTGAATTTCCTGGCATTTAGGCAAGTAACA +
Preference number: 1 (lower is better)
Translates to: REIFLYSYSTCWRSC*LKGQLNFLAFRQVT
Trigger: TGTTACTTGCCTAAATGCCAGGAAATTCAACTGGCCTTTTAATCAGCAAGATCGCCAGCAAGTACTGTAACTGTAAAGGAAAATCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 90 bp AGTTCGACTTCTGTCCAAATACTTGTGCAACAAAAAGTTAAGAAATaGAGACGAACTCCAGGTGACATTGTCATTACACAGCTTCAAATT +
Preference number: 1 (lower is better)
Translates to: SSTSVQILVQQKVKK*RRTPGDIVITQLQI
Trigger: AATTTGAAGCTGTGTAATGACAATGTCACCTGGAGTTCGTCTCCATTTCTTAACTTTTTGTTGCACAAGTATTTGGACAGAAGTCGAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 2 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
73% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCTGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 2 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR-3UTR GCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 2 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGTCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCG +
Preference number: 2 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRSHGRA*RCWDPA
Trigger: CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGA...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGTGGGAGCCAAGGTGCTaGGCCGAGCGATGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRWEPRC*AERCSR
Trigger: CCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCA...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGGTGGCCGGGCCACAGTaGCACCGGCCAGGATGGGGG +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEVAGPQ*HRPGWG
Trigger: CCCCCATCCTGGCCGGTGTCACTGTGGCCCGGCCAC...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAACGCGCGTGGAGATGCTaGGACCCTGCGCTGTGGGAG +
Preference number: 2 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQRAWRC*DPALWE
Trigger: CTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCG...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAATTGGAAGCGGAGTTCTaGAGAGACGGCGTCCGCGGG +
Preference number: 2 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKLEAEF*RDGVRG
Trigger: CCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCAA...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCTGGGCGCTCAGGGGTaGCCGGGCCACAGTGACACC +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGELGAQG*PGHSDT
Trigger: GGTGTCACTGTGGCCCGGCCACCCCTGAGCGCCCAG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAGGGGTGCAGAAGAGGTaGGGGGCCAGGTTAAGTTCC +
Preference number: 2 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKGVQKR*GARLSS
Trigger: GGAACTTAACCTGGCCCCTCACCTCTTCTGCACCCC...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGGGGGTGCAGAAGAGGTaGGGGGCCAGGTTAAGTTCC +
Preference number: 2 (lower is better)
Translates to: VRAGVLITTGALHGAPTGGVQKR*GARLSS
Trigger: GGAACTTAACCTGGCCCCTCACCTCTTCTGCACCCC...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
67% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGATCCCTCGCTCGGCGTaGGCCAGGGGCTCGCTGCAA +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEIPRSA*ARGSLQ
Trigger: TTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGAT...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGGCAGGTGTGCACAGGTaGCGTCCCGCACACGCCCTG +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEAGVHR*RPAHAL
Trigger: CAGGGCGTGTGCGGGACGCCACCTGTGCACACCTGC...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRTFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 2 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCCGAGCGCTGCCCTCTaGTCTGCCTGGACTCTCAGA +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEPSAAL*SAWTLR
Trigger: TCTGAGAGTCCAGGCAGAGCAGAGGGCAGCGCTCGG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGGCAGCGCCTCCATCATaGAGAACGCTGCCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEAAPPS*RTLPSP
Trigger: AGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGC...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGGACCACGGCCCAGGCTaGGAGCTTGACCGGCCAGAC +
Preference number: 2 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGDHGPG*ELDRPD
Trigger: GTCTGGCCGGTCAAGCTCCCAGCCTGGGCCGTGGTC...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGAGGGCCAGGGGCTCGCTaGAAGGCCAAGGGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRGPGAR*KAKGAS
Trigger: GCTGGCTCCCTTGGCCTTGCAGCGAGCCCCTGGCCC...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGTGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGTCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCG +
Preference number: 2 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRSHGRA*RCWDPA
Trigger: CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGA...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCCTGTTCTCCCTCCTTaGCTCCTGATCTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRPVLPP*LLICGM
Trigger: CATCCCACAGATCAGGAGCCAAGGAGGGAGAACAGG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGGCCATGCCGGGGGAGTaGACATGCTGTAGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEAMPGE*TCCREK
Trigger: CTTCTCCCTACAGCATGTCCACTCCCCCGGCATGGC...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGAACTCTGCATTTCACTaGGTTCTCAGGGGCCCATCC +
Preference number: 2 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRNSAFH*VLRGPS
Trigger: GGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTT...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGCCGAGCGCTGCCCTCTaGTCTGCCTGGACTCTCAGA +
Preference number: 2 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEPSAAL*SAWTLR
Trigger: TCTGAGAGTCCAGGCAGAGCAGAGGGCAGCGCTCGG...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCTCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCG +
Preference number: 2 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGSHGRA*RCWDPA
Trigger: CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGA...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGAGCCTCACCCCGACAGTaGCCAGCACGGACTGTGGGC +
Preference number: 2 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRASPRQ*PARTVG
Trigger: GCCCACAGTCCGTGCTGGCCACTGTCGGGGTGAGGC...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CAA 90 bp CTGCAAGCGTGTCTCGCATGGTGTCGTTGGTCTCATCTGGTTTCGTaGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LQACLAWCRWSHLVS*VCPFTPARSRALSR
Trigger: CCTGCTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGACACGCTTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCGTCCCGCACACGCCCTaGGAGCACGGCCCCCACAGA +
Preference number: 2 (lower is better)
Translates to: GMDSLATATQLHVSETHSVPHTP*EHGPHR
Trigger: TCTGTGGGGGCCGTGCTCTCAGGGCGTGTGCGGGAC...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGCTGGTTTCGTTGGTCTaGCCCTTCACCCCTGCGAGG +
Preference number: 2 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGLVSLV*PFTPAR
Trigger: CCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAG...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GCCTTGAAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCCGTGGGAGCCTGGCTCAAGGACTaGGTGCAGAGGGCATCAGCG +
Preference number: 2 (lower is better)
Translates to: ALKSAIGRMASKETEPVGAWLKD*VQRASA
Trigger: CGCTGATGCCCTCTGCACCCAGTCCTTGAGCCAGGC...TCCCACGGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR CCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGTTCCTGTCCTCGGCCTaGCTCAAGGACTGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGFLSSA*LKDWVQ
Trigger: CTGCACCCAGTCCTTGAGCCAGGCCGAGGACAGGAA...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CAA 90 bp CAGTGTCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTaGGGAAGATGGGCAGGAGACCCCATGACACCTGGCACCTGGGCC +
Preference number: 2 (lower is better)
Translates to: QCLTRGKTMKTAMAS*GRWAGDPMTPGTWA
Trigger: GGCCCAGGTGCCAGGTGTCATGGGGTCTCCTGCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGACACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGGGGTGCAGAAGAGGTaGGGGGCCAGGTTAAGTTCC +
Preference number: 2 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGGVQKR*GARLSS
Trigger: GGAACTTAACCTGGCCCCTCACCTCTTCTGCACCCC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCAAATGCAGGTGGGCTaGTGGTACCGCAACCAAGTT +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEQMQVG*WYRNQV
Trigger: AACTTGGTTGCGGTACCATCAGCCCACCTGCATTTG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp CTGAAGGTGGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTCTACTCAATTGCACGTaGGTGAAACACACAGCTGGG +
Preference number: 2 (lower is better)
Translates to: LKVGGPMGQECLVALVSPLLNCT*VKHTAG
Trigger: CCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAG...AGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR GCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCCTAATTGTCTTTTCCTaGACTCTGTGTGTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCLIVFS*TLCVGF
Trigger: AAAACCAACACACAGAGTGCAGGAAAAGACAATTAG...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR-3UTR GCA 90 bp GCCTTGAAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCCGTGGGAACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: ALKSAIGRMASKETEPVGTFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...TCCCACGGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR GCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGTFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGATGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 2 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGTTGGAAGCGGAGTTCTaGAGAGACGGCGTCCGCGGG +
Preference number: 2 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRLEAEF*RDGVRG
Trigger: CCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCAA...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CAA 90 bp GGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTaGGAGACATCTATGCAGACTGGAAACGAAGAAACAGAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: GWPHGTGVPGGPGFP*ETSMQTGNEETEGG
Trigger: GCCTCCTTCTGTTTCTTCGTTTCCAGTCTGCATAGATGTCTCCAAGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR TCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCGGGAAGGAAACCAGATaGGGTGTGACCCCTGCGCCT +
Preference number: 2 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFGKETR*GVTPAP
Trigger: AGGCGCAGGGGTCACACCTCATCTGGTTTCCTTCCC...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCGGGAAGGAAACCAGATaGGGTGTGACCCCTGCGCCT +
Preference number: 2 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSGKETR*GVTPAP
Trigger: AGGCGCAGGGGTCACACCTCATCTGGTTTCCTTCCC...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGCTAATTGTCTTTTCCTaGACTCTGTGTGTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGLIVFS*TLCVGF
Trigger: AAAACCAACACACAGAGTGCAGGAAAAGACAATTAG...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGTGCATGGAGAACTCTaGATTTCACTGAGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRVHGEL*ISLSSQ
Trigger: CTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCAC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGACATCATGCAGAACGCTaGCGTCCCCTCCAATCTCCC +
Preference number: 2 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGHHAER*RPLQSP
Trigger: GGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATG...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCACCCTGCGAGGAGCCGTaGTCTGAGCAGGTGTGCACA +
Preference number: 2 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSPCEEP*SEQVCT
Trigger: TGTGCACACCTGCTCAGAGCACGGCTCCTCGCAGGG...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAGGAGCTTTAGGTGCATaGAGAACTCTGCATTTCACT +
Preference number: 2 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQGALGA*RTLHFT
Trigger: AGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCC...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCGTGCAGGAGAATCTCTaGGGTGCTCAGCCAGGGGAG +
Preference number: 2 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSVQENL*GAQPGE
Trigger: CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCAC...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCATGTGACCCCTGCGCCTaGGCCTCCGTCTCCACTCTA +
Preference number: 2 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSCDPCA*ASVSTL
Trigger: TAGAGTGGAGACGGAGGCCCAGGCGCAGGGGTCACA...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp CAGTGGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACTCCAGCACCAAGGGAGCCAGCATaGCCGGCCGAGCGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: QWRVFMIKLNSCVHPTPAPREPA*PAERCP
Trigger: AGGGCAGCGCTCGGCCGGTCATGCTGGCTCCCTTGG...TGCTGGAGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGCAAATGCAGGTGGGCTaGTGGTACCGCAACCAAGTT +
Preference number: 2 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEQMQVG*WYRNQV
Trigger: AACTTGGTTGCGGTACCATCAGCCCACCTGCATTTG...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR TCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCGAGCAGCGTGCGGCATaGGGAAGGTGCAGGAGAATC +
Preference number: 2 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGEQRAA*GRCRRI
Trigger: GATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTC...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTGAGTTCTCAGGGGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 2 (lower is better)
Translates to: DKGALGAWRTLHFTEFSGGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...CCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCAAAACAACAGTGTCTaGAAGCGTGTCTCGCATGGT +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEQNNSV*KRVSHG
Trigger: ACCATGCGAGACACGCTTGCAGACACTGTTGTTTTG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACCAAAGGCTCCCTCTTaGAAGCGGAGTTCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGPKAPS*KRSSGE
Trigger: CTCTCCAGAACTCCGCTTCCAAGAGGGAGCCTTTGG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCCCCCAGCACCCAGTGTaGAGGGACCAGGATCTGACA +
Preference number: 2 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGPQHPV*RDQDLT
Trigger: TGTCAGATCCTGGTCCCTCCACACTGGGTGCTGGGG...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGACCTGTTCTCCCTCCTTaGCTCCTGATCTGTGGGATG +
Preference number: 2 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGPVLPP*LLICGM
Trigger: CATCCCACAGATCAGGAGCCAAGGAGGGAGAACAGG...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp CAGTGGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACTCCAGCACTGGGCGCTCAGGGGTaGCCGGGCCACAGTGACACC +
Preference number: 2 (lower is better)
Translates to: QWRVFMIKLNSCVHPTPALGAQG*PGHSDT
Trigger: GGTGTCACTGTGGCCCGGCCACCCCTGAGCGCCCAG...TGCTGGAGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp CTGAAGGTGGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTGGTCACATATGTGCATaGTCGTACCCTTCAGCTTTT +
Preference number: 2 (lower is better)
Translates to: LKVGGPMGQECLVALVSPGHICA*SYPSAF
Trigger: AAAAGCTGAAGGGTACGACCATGCACATATGTGACC...AGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR CCA 90 bp CAGTGGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACTCCAGCACACCTGGGCCTAAGCTaGGAGGCCAGCGGCGTCCCC +
Preference number: 2 (lower is better)
Translates to: QWRVFMIKLNSCVHPTPAHLGLS*EASGVP
Trigger: GGGGACGCCGCTGGCCTCCCAGCTTAGGCCCAGGTG...TGCTGGAGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCATTCGAGGAATGGACCTaGCGTTCGTGCCGGTGTGCT +
Preference number: 2 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSFEEWT*RSCRCA
Trigger: AGCACACCGGCACGAACGTCAGGTCCATTCCTCGAA...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAAACTCTGCATTTCACTaGGTTCTCAGGGGCCCATCC +
Preference number: 2 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGNSAFH*VLRGPS
Trigger: GGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTT...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp GCCTTGAAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCCGTGGGAGTCGTTGGTCTCATCTaGTTTCGTTGGTCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: ALKSAIGRMASKETEPVGVVGLI*FRWSAP
Trigger: AGGGGCAGACCAACGAAACCAGATGAGACCAACGAC...TCCCACGGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR CCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCAGCAATGGCATCCTTaGGAAGATGGGCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFQQWHP*EDGQET
Trigger: GGTCTCCTGCCCATCTTCCCAAGGATGCCATTGCTG...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCAAGCACATCGCGCCGTaGAGCACTAGTATTGCACGC +
Preference number: 2 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFKHIAP*STSIAR
Trigger: GCGTGCAATACTAGTGCTCCACGGCGCGATGTGCTT...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CAA 90 bp TTCAATTTCCCCTCCCAGAAAGCAACTCGTAGGGAAGGGAGGGCCTaGAAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCC +
Preference number: 2 (lower is better)
Translates to: FNFPSQKATRREGRA*KSAIGRMASKETEP
Trigger: GGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGCCCTCCCTTCCCTACGAGTTGCTTTCTGGGAGGGGAAATTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR TCA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGTGGGAGCCAAGGTGCTaGGCCGAGCGATGCTCCCGG +
Preference number: 2 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVWEPRC*AERCSR
Trigger: CCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCA...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGACAAATGCAGGTGGGCTaGTGGTACCGCAACCAAGTT +
Preference number: 2 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRQMQVG*WYRNQV
Trigger: AACTTGGTTGCGGTACCATCAGCCCACCTGCATTTG...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCCTAATTGTCTTTTCCTaGACTCTGTGTGTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFLIVFS*TLCVGF
Trigger: AAAACCAACACACAGAGTGCAGGAAAAGACAATTAG...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR-3UTR GCA 90 bp GACTGTGGGCTACAGAGTTGCTTCAGCCTGAGCACTCAGCCTGAATTTGGACATACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 2 (lower is better)
Translates to: DCGLQSCFSLSTQPEFGHTFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...ATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCAAAGGAGCTTTAGGTaGATGGAGAACTCTGCATTT +
Preference number: 2 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEQRSFR*MENSAF
Trigger: AAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAAAGTCGAAAGCCAAATaGAGGTGGGCTGATGGTACC +
Preference number: 2 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGKSKAK*RWADGT
Trigger: GGTACCATCAGCCCACCTGCATTTGGCTTTCGACTT...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR GCA 90 bp TTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAATGCCCACGGCACAGCTaGCCGAGTGGGCGGGTGGAG +
Preference number: 2 (lower is better)
Translates to: FLQININAQQYRNEQREECPRHS*PSGRVE
Trigger: CTCCACCCGCCCACTCGGGCAGCTGTGCCGTGGGCA...TTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCCCAAAGGCTCCCTCTTaGAAGCGGAGTTCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGPKAPS*KRSSGE
Trigger: CTCTCCAGAACTCCGCTTCCAAGAGGGAGCCTTTGG...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GTGTTATTTAGTGATTTGTTCAGCGCTCATCTCTTCCACCAGACTGCGCTTCCTGCCTCACCCCGACAGTaGCCAGCACGGACTGTGGGC +
Preference number: 2 (lower is better)
Translates to: VLFSDLFSAHLFHQTALPASPRQ*PARTVG
Trigger: GCCCACAGTCCGTGCTGGCCACTGTCGGGGTGAGGC...AGGAAGCGCAGTCTGGTGGAAGAGATGAGCGCTGAACAAATCACTAAATAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCACAGCAATGGCATCCTTaGGAAGATGGGCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSQQWHP*EDGQET
Trigger: GGTCTCCTGCCCATCTTCCCAAGGATGCCATTGCTG...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCAGGCATGGACAGCCTaGCAACAGCTACTCAATTGC +
Preference number: 2 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFQAWTA*QQLLNC
Trigger: GCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCCTG...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CAA 90 bp CCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCTACTCAATaGCACGTGAGTGAAACACACAGCTGGGTCCAACCACGGCTTTTC +
Preference number: 2 (lower is better)
Translates to: PVVTTGMDSLATATQ*HVSETHSWVQPRLF
Trigger: GAAAAGCCGTGGTTGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCGCACAAGCTAAGCTGTaGGATGGGAAGGAAACCAGA +
Preference number: 2 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFAQAKL*DGKETR
Trigger: TCTGGTTTCCTTCCCATCTCACAGCTTAGCTTGTGC...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp TTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAGGCCCCACCTGGCCATaGCGGGGGAGTGGACATGCT +
Preference number: 2 (lower is better)
Translates to: FLQININAQQYRNEQREEGPTWP*RGSGHA
Trigger: AGCATGTCCACTCCCCCGGCATGGCCAGGTGGGGCC...TTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGGGAGCTTTAGGTGCATaGAGAACTCTGCATTTCACT +
Preference number: 2 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEGALGA*RTLHFT
Trigger: AGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCC...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGACTCGCATGGTGTCGTTaGTCTCATCTGGTTTCGTTG +
Preference number: 2 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRLAWCR*SHLVSL
Trigger: CAACGAAACCAGATGAGACCAACGACACCATGCGAG...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCGGATCTAAACACACATaGAGACGGATGAGCAGCGTG +
Preference number: 2 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFGSKHT*RRMSSV
Trigger: CACGCTGCTCATCCGTCTCCATGTGTGTTTAGATCC...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGCAGGACAGGGCAGAGTaGGGGCTCCGACTTCGAGGA +
Preference number: 2 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVQDRAE*GLRLRG
Trigger: TCCTCGAAGTCGGAGCCCTCACTCTGCCCTGTCCTG...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCCCGCAACGAACAGCGTaGGGAAAGATTCTCATGCCA +
Preference number: 2 (lower is better)
Translates to: GMDSLATATQLHVSETHSPQRTA*GKILMP
Trigger: TGGCATGAGAATCTTTCCTCACGCTGTTCGTTGCGG...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp AAGAAGCCAGTGGCTGTCATGCGCACTCAGGTCAATGGTTTGTGTGGGTTCTCCGCTGAACAAGTCAGGTaGAAATCTGCAGGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: KKPVAVMRTQVNGLCGFSAEQVR*KSAGLE
Trigger: CTCCAGCCCTGCAGATTTTCACCTGACTTGTTCAGC...GGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR TCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCAGTCTACGCATGGGGCTaGACAAGTCAGGTGAAAATC +
Preference number: 2 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSVYAWG*TSQVKI
Trigger: GATTTTCACCTGACTTGTTCAGCCCCATGCGTAGAC...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGGCAGCGCCTCCATCATaGAGAACGCTGCCGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVAAPPS*RTLPSP
Trigger: AGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGC...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp TTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAACTGCCCCTTCACCCCTaGGAGGAGCCGTGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: FLQININAQQYRNEQREELPLHP*EEPCSE
Trigger: CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAG...TTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCCAAAACAACAGTGTCTaGAAGCGTGTCTCGCATGGT +
Preference number: 2 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSQNNSV*KRVSHG
Trigger: ACCATGCGAGACACGCTTGCAGACACTGTTGTTTTG...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GTGTTATTTAGTGATTTGTTCAGCGCTCATCTCTTCCACCAGACTGCGCTTCCTGCCAGGCCTAGAATGTaGCTCACCCCGACAGTGGCC +
Preference number: 2 (lower is better)
Translates to: VLFSDLFSAHLFHQTALPARPRM*LTPTVA
Trigger: GGCCACTGTCGGGGTGAGGCACATTCTAGGCCTGGC...AGGAAGCGCAGTCTGGTGGAAGAGATGAGCGCTGAACAAATCACTAAATAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTGAGTTCTCAGGGTGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 2 (lower is better)
Translates to: DKGALGAWRTLHFTEFSGWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...CCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCCTCGCATGGTGTCGTTaGTCTCATCTGGTTTCGTTG +
Preference number: 2 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGLAWCR*SHLVSL
Trigger: CAACGAAACCAGATGAGACCAACGACACCATGCGAG...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGGCGCCTGGCTCTGGGTaGGTAACAGGAGCTACAGGC +
Preference number: 2 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVAPGSG*VTGATG
Trigger: GCCTGTAGCTCCTGTTACCCACCCAGAGCCAGGCGC...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp AAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAAGATTCTTGGGAGCCTCCAGTGTaGCGCCTGGCTCTGGGTGGG +
Preference number: 2 (lower is better)
Translates to: KSTSMLSNTATNSVRKDSWEPPV*RLALGG
Trigger: CCCACCCAGAGCCAGGCGCCACACTGGAGGCTCCCA...AGAATCTTTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp GTGTTATTTAGTGATTTGTTCAGCGCTCATCTCTTCCACCAGACTGCGCTTCCTGAGCAGCGTGCGGCATaGGGAAGGTGCAGGAGAATC +
Preference number: 2 (lower is better)
Translates to: VLFSDLFSAHLFHQTALPEQRAA*GRCRRI
Trigger: GATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTC...AGGAAGCGCAGTCTGGTGGAAGAGATGAGCGCTGAACAAATCACTAAATAACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCGTGCATGGAGAACTCTaGATTTCACTGAGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFVHGEL*ISLSSQ
Trigger: CTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCAC...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCAAGTCGAAAGCCAAATaGAGGTGGGCTGATGGTACC +
Preference number: 2 (lower is better)
Translates to: GMDSLATATQLHVSETHSKSKAK*RWADGT
Trigger: GGTACCATCAGCCCACCTGCATTTGGCTTTCGACTT...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp AGTGTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCTTGGAAGCGGAGTTCTaGAGAGACGGCGTCCGCGGG +
Preference number: 2 (lower is better)
Translates to: SVPVILFPEQFVRMPPLSLEAEF*RDGVRG
Trigger: CCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCAA...GGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp TTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAATGTGACCCCTGCGCCTaGGCCTCCGTCTCCACTCTA +
Preference number: 2 (lower is better)
Translates to: FLQININAQQYRNEQREECDPCA*ASVSTL
Trigger: TAGAGTGGAGACGGAGGCCCAGGCGCAGGGGTCACA...TTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GACTGTGGGCTACAGAGTTGCTTCAGCCTGAGCACTCAGCCTGAATTTGGACATAAGTCGAAAGCCAAATaGAGGTGGGCTGATGGTACC +
Preference number: 2 (lower is better)
Translates to: DCGLQSCFSLSTQPEFGHKSKAK*RWADGT
Trigger: GGTACCATCAGCCCACCTGCATTTGGCTTTCGACTT...ATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGGGTAGAGACAAAGCATaGAGAAACTTACTCATTCTT +
Preference number: 2 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGGRDKA*RNLLIL
Trigger: AAGAATGAGTAAGTTTCTGCATGCTTTGTCTCTACC...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GTGTTATTTAGTGATTTGTTCAGCGCTCATCTCTTCCACCAGACTGCGCTTCCTGCCCGAGTGGGCGGGTaGAGGGATGAGATTTCAGAT +
Preference number: 2 (lower is better)
Translates to: VLFSDLFSAHLFHQTALPARVGG*RDEISD
Trigger: ATCTGAAATCTCATCCCTCCACCCGCCCACTCGGGC...AGGAAGCGCAGTCTGGTGGAAGAGATGAGCGCTGAACAAATCACTAAATAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCTGCATAGGGTGCGCGTCTaGTACACTGTCGCCGAGTAC +
Preference number: 2 (lower is better)
Translates to: VPVILFPEQFVRMPPLSLHRVRV*YTVAEY
Trigger: GTACTCGGCGACAGTGTACCAGACGCGCACCCTATG...CAGGGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp AAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAAGATTCTACACATGGAGACGGATaGGCAGCGTGCGGCATGAGG +
Preference number: 2 (lower is better)
Translates to: KSTSMLSNTATNSVRKDSTHGDG*AACGMR
Trigger: CCTCATGCCGCACGCTGCTCATCCGTCTCCATGTGT...AGAATCTTTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp AAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAAGATTCTGCTACAGGCCAGCAATaGCCTTCCTGTCCTCGGCCT +
Preference number: 2 (lower is better)
Translates to: KSTSMLSNTATNSVRKDSATGQQ*PSCPRP
Trigger: AGGCCGAGGACAGGAAGGGCATTGCTGGCCTGTAGC...AGAATCTTTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp TTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAGGCCAGCACGGACTGTaGGCTACAGAGTTGCTTCAG +
Preference number: 2 (lower is better)
Translates to: FLQININAQQYRNEQREEGQHGL*ATELLQ
Trigger: CTGAAGCAACTCTGTAGCCCACAGTCCGTGCTGGCC...TTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp AAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAAGATTCTTGTGGCGCCTGGCTCTaGGTGGGTAACAGGAGCTAC +
Preference number: 2 (lower is better)
Translates to: KSTSMLSNTATNSVRKDSCGAWL*VGNRSY
Trigger: GTAGCTCCTGTTACCCACCCAGAGCCAGGCGCCACA...AGAATCTTTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp GTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCTGGTACCGCAACCAAGTTaGGCGTTCTACCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: VPVILFPEQFVRMPPLSLVPQPS*AFYHCH
Trigger: ATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTAC...CAGGGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp GTGTTATTTAGTGATTTGTTCAGCGCTCATCTCTTCCACCAGACTGCGCTTCCTGTACCGCAACCAAGTTaGGCGTTCTACCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: VLFSDLFSAHLFHQTALPVPQPS*AFYHCH
Trigger: ATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTAC...AGGAAGCGCAGTCTGGTGGAAGAGATGAGCGCTGAACAAATCACTAAATAACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp CAGTGGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACTCCAGCAAAGATGAGGGCGCTGTaGCTTAGAACAAGCAAGTCG +
Preference number: 2 (lower is better)
Translates to: QWRVFMIKLNSCVHPTPAKMRAL*LRTSKS
Trigger: CGACTTGCTTGTTCTAAGTCACAGCGCCCTCATCTT...TGCTGGAGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp AGTGTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCACGGGGGAAGACGATaGAGACAGCAATGGCATCCT +
Preference number: 2 (lower is better)
Translates to: SVPVILFPEQFVRMPPLSHGGRR*RQQWHP
Trigger: AGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTG...GGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCTGCAAGCGTGTCTCGCATaGTGTCGTTGGTCTCATCTG +
Preference number: 2 (lower is better)
Translates to: VPVILFPEQFVRMPPLSLQACLA*CRWSHL
Trigger: CAGATGAGACCAACGACACCATGCGAGACACGCTTG...CAGGGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCATTAACAAGCAGCCAGTaGCGAGTGTTCATGATAAAA +
Preference number: 2 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSLTSSQ*RVFMIK
Trigger: TTTTATCATGAACACTCGCCACTGGCTGCTTGTTAA...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp AGTGTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCCGCAACGAACAGCGTaGGGAAAGATTCTCATGCCA +
Preference number: 2 (lower is better)
Translates to: SVPVILFPEQFVRMPPLSPQRTA*GKILMP
Trigger: TGGCATGAGAATCTTTCCTCACGCTGTTCGTTGCGG...GGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGTCCAGGTCACATATGTaGATGGTCGTACCCTTCAGC +
Preference number: 2 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVSRSHM*MVVPFS
Trigger: GCTGAAGGGTACGACCATGCACATATGTGACCTGGA...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp AGTGTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCGTCTACGCATGGGGCTaGACAAGTCAGGTGAAAATC +
Preference number: 2 (lower is better)
Translates to: SVPVILFPEQFVRMPPLSVYAWG*TSQVKI
Trigger: GATTTTCACCTGACTTGTTCAGCCCCATGCGTAGAC...GGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCATACACAAGAAAGTGCTaGTTACATTGTTGTTTTGTG +
Preference number: 2 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSYTRKC*LHCCFV
Trigger: CACAAAACAACAATGTAAGCAGCACTTTCTTGTGTA...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp AGTGTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCTGCCCAGCTCCGCCATaGCTCAGTGCAGAATTTATA +
Preference number: 2 (lower is better)
Translates to: SVPVILFPEQFVRMPPLSCPAPP*LSAEFI
Trigger: TATAAATTCTGCACTGAGCCATGGCGGAGCTGGGCA...GGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR TCA 90 bp CAGTGGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACTCCAGCATTAAAGACTTGGTGTTaGGAAGCACAAGCTAAGCTG +
Preference number: 2 (lower is better)
Translates to: QWRVFMIKLNSCVHPTPALKTWC*EAQAKL
Trigger: CAGCTTAGCTTGTGCTTCTCAACACCAAGTCTTTAA...TGCTGGAGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GACTGTGGGCTACAGAGTTGCTTCAGCCTGAGCACTCAGCCTGAATTTGGACATCTCTATTCAGAACGCTaGTTTCAAGATATCAGAGAT +
Preference number: 2 (lower is better)
Translates to: DCGLQSCFSLSTQPEFGHLYSER*FQDIRD
Trigger: ATCTCTGATATCTTGAAACCAGCGTTCTGAATAGAG...ATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CAA 90 bp TGTGGGTTCTCCAGAGAGAGAGATTTTCCTTTACAGTTACAGTACTaGCTGGCGATCTTGCTGATTAAAAGGCCAGTTGAATTTCCTGGC +
Preference number: 2 (lower is better)
Translates to: CGFSRERDFPLQLQY*LAILLIKRPVEFPG
Trigger: GCCAGGAAATTCAACTGGCCTTTTAATCAGCAAGATCGCCAGCAAGTACTGTAACTGTAAAGGAAAATCTCTCTCTCTGGAGAACCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR GCA 90 bp TGTGGGAGGCTGAAGACTTCACCTGACAGGCCTTCTGAATTCTTTACTCTTGGCCTAATTGTCTTTTCCTaGACTCTGTGTGTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: CGRLKTSPDRPSEFFTLGLIVFS*TLCVGF
Trigger: AAAACCAACACACAGAGTGCAGGAAAAGACAATTAG...GCCAAGAGTAAAGAATTCAGAAGGCCTGTCAGGTGAAGTCTTCAGCCTCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR CAA 90 bp ACAAGAAAGTGCTGCTTACATTGTTGTTTTGTGTTATTTAGTGATTaGTTCAGCGCTCATCTCTTCCACCAGACTGCGCTTCCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: TRKCCLHCCFVLFSD*FSAHLFHQTALPED
Trigger: GTCCTCAGGAAGCGCAGTCTGGTGGAAGAGATGAGCGCTGAACAAATCACTAAATAACACAAAACAACAATGTAAGCAGCACTTTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp AGTGTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCAAAGGAGCTTTAGGTaGATGGAGAACTCTGCATTT +
Preference number: 2 (lower is better)
Translates to: SVPVILFPEQFVRMPPLSQRSFR*MENSAF
Trigger: AAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTG...GGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp CAGTGGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACTCCAGCATCCGCCATGGCTCAGTaGAGAATTTATACATTATAT +
Preference number: 2 (lower is better)
Translates to: QWRVFMIKLNSCVHPTPASAMAQ*RIYTLY
Trigger: ATATAATGTATAAATTCTGCACTGAGCCATGGCGGA...TGCTGGAGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR GCA 90 bp GTGTTATTTAGTGATTTGTTCAGCGCTCATCTCTTCCACCAGACTGCGCTTCCTCTAATTGTCTTTTCCTaGACTCTGTGTGTTGGTTTT +
Preference number: 2 (lower is better)
Translates to: VLFSDLFSAHLFHQTALPLIVFS*TLCVGF
Trigger: AAAACCAACACACAGAGTGCAGGAAAAGACAATTAG...AGGAAGCGCAGTCTGGTGGAAGAGATGAGCGCTGAACAAATCACTAAATAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CCA 90 bp GTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCTGCTCTATTCAGAACGCTaGTTTCAAGATATCAGAGAT +
Preference number: 2 (lower is better)
Translates to: VPVILFPEQFVRMPPLSLLYSER*FQDIRD
Trigger: ATCTCTGATATCTTGAAACCAGCGTTCTGAATAGAG...CAGGGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CAA 90 bp AAACATCCGTATAATACATTTGCACCCTGTATACAATGGGTCCCTTaGAAACTGGCCAACAGTCAGCGATGGCAGATTTTCAATCATAGA +
Preference number: 2 (lower is better)
Translates to: KHPYNTFAPCIQWVP*KLANSQRWQIFNHR
Trigger: TCTATGATTGAAAATCTGCCATCGCTGACTGTTGGCCAGTTTCAAAGGGACCCATTGTATACAGGGTGCAAATGTATTATACGGATGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 72 bp TGGGAGCTTGACCGGCCAGACGCCCGTGGGTGGGCCTaGGCCCTCCCGCCTGGGAGCCTCCAGTGTGGCGCC +
Preference number: 3 (lower is better)
Translates to: WELDRPDARGWA*ALPPGSLQCGA
Trigger: GGCGCCACACTGGAGGCTCCCAGGCGGGAGGGCCCAGGCCCACCCACGGGCGTCTGGCCGGTCAAGCTCCCA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp AGGCCAGCGGCGTCCCCAGGAGACCACGGCCCAGGCTaGGAGCTTGACCGGCCAGACGCCCGTGGGTGGGCC +
Preference number: 3 (lower is better)
Translates to: RPAASPGDHGPG*ELDRPDARGWA
Trigger: GGCCCACCCACGGGCGTCTGGCCGGTCAAGCTCCCAGCCTGGGCCGTGGTCTCCTGGGGACGCCGCTGGCCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 72 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTC +
Preference number: 3 (lower is better)
Translates to: PAGPTSHGRAWR*WDPALWEAEDF
Trigger: GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR CCA 72 bp AGGAGACCCCATGACACCTGGCACCTGGGCCTAAGCTaGGAGGCCAGCGGCGTCCCCAGGAGACCACGGCCC +
Preference number: 3 (lower is better)
Translates to: RRPHDTWHLGLS*EASGVPRRPRP
Trigger: GGGCCGTGGTCTCCTGGGGACGCCGCTGGCCTCCCAGCTTAGGCCCAGGTGCCAGGTGTCATGGGGTCTCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 72 bp TGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTaGGCAGGTGTGCACAGGTGGCGTCCCGCACACGCC +
Preference number: 3 (lower is better)
Translates to: WSAPSPLRGAVL*AGVHRWRPAHA
Trigger: GGCGTGTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 72 bp TGGGCCCTCCCGCCTGGGAGCCTCCAGTGTGGCGCCTaGCTCTGGGTGGGTAACAGGAGCTACAGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: WALPPGSLQCGA*LWVGNRSYRPA
Trigger: TGCTGGCCTGTAGCTCCTGTTACCCACCCAGAGCCAGGCGCCACACTGGAGGCTCCCAGGCGGGAGGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp GGACATGCTGTAGGGAGAAGCATCCCTCGCTCGGCGTaGGCCAGGGGCTCGCTGCAAGGCCAAGGGAGCCAG +
Preference number: 3 (lower is better)
Translates to: GHAVGRSIPRSA*ARGSLQGQGSQ
Trigger: CTGGCTCCCTTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTACAGCATGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR GCA 72 bp TTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTaGTCTGAGCAGGTGTGCACAGGTGGCGTCCCGCAC +
Preference number: 3 (lower is better)
Translates to: FVGLPLHPCEEP*SEQVCTGGVPH
Trigger: GTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 72 bp GAAACAGAGCCCGTGGGAGTGGGCTCTGAAGGTGGGTaGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGT +
Preference number: 3 (lower is better)
Translates to: ETEPVGVGSEGG*PHGTGVPGGPG
Trigger: ACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAGAGCCCACTCCCACGGGCTCTGTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR CAA 90 bp GCCTTGAAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCCGTGGGAGCCCAGGCTGGGAGCTaGACCGGCCAGACGCCCGTG +
Preference number: 3 (lower is better)
Translates to: ALKSAIGRMASKETEPVGAQAGS*TGQTPV
Trigger: CACGGGCGTCTGGCCGGTCAAGCTCCCAGCCTGGGC...TCCCACGGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR GCA 72 bp CGACTTCGAGGAATGGACCTGACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCCTCCACGGGGCCCCCA +
Preference number: 3 (lower is better)
Translates to: RLRGMDLTFVPV*LSLRAPSTGPP
Trigger: TGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAACGTCAGGTCCATTCCTCGAAGTCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR GCA 72 bp CAAGGGAGCCAGCATGACCGGCCGAGCGCTGCCCTCTaGTCTGCCTGGACTCTCAGAGACGTCCAGGAGGTA +
Preference number: 3 (lower is better)
Translates to: QGSQHDRPSAAL*SAWTLRDVQEV
Trigger: TACCTCCTGGACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGCAGCGCTCGGCCGGTCATGCTGGCTCCCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR GCA 72 bp GGTGCAGAGGGCATCAGCGATGCCAGGCCTAGAATGTaGCTCACCCCGACAGTGGCCAGCACGGACTGTGGG +
Preference number: 3 (lower is better)
Translates to: GAEGISDARPRM*LTPTVASTDCG
Trigger: CCCACAGTCCGTGCTGGCCACTGTCGGGGTGAGGCACATTCTAGGCCTGGCATCGCTGATGCCCTCTGCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp ATCCTTGGGAAGATGGGCAGGAGACCCCATGACACCTaGCACCTGGGCCTAAGCTGGGAGGCCAGCGGCGTC +
Preference number: 3 (lower is better)
Translates to: ILGKMGRRPHDT*HLGLSWEASGV
Trigger: GACGCCGCTGGCCTCCCAGCTTAGGCCCAGGTGCCAGGTGTCATGGGGTCTCCTGCCCATCTTCCCAAGGAT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp CCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCCGTaGGAGTGGGCTCTGAAGGTGGGTGGCCCCATGGGA +
Preference number: 3 (lower is better)
Translates to: PSAGWPPRKQSP*EWALKVGGPMG
Trigger: TCCCATGGGGCCACCCACCTTCAGAGCCCACTCCCACGGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR CAA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCCCTGTTCTCCCTCCTaGGCTCCTGATCTGTGGGAT +
Preference number: 3 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRPCSPS*APDLWD
Trigger: ATCCCACAGATCAGGAGCCAAGGAGGGAGAACAGGG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 72 bp GGGCAGAGTGAGGGCTCCGACTTCGAGGAATGGACCTaGCGTTCGTGCCGGTGTGCTTATCACTACGGGCGC +
Preference number: 3 (lower is better)
Translates to: GQSEGSDFEEWT*RSCRCAYHYGR
Trigger: GCGCCCGTAGTGATAAGCACACCGGCACGAACGTCAGGTCCATTCCTCGAAGTCGGAGCCCTCACTCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 72 bp CAATGGCATCCTTGGGAAGATGGGCAGGAGACCCCATaGCACCTGGCACCTGGGCCTAAGCTGGGAGGCCAG +
Preference number: 3 (lower is better)
Translates to: QWHPWEDGQETP*HLAPGPKLGGQ
Trigger: CTGGCCTCCCAGCTTAGGCCCAGGTGCCAGGTGTCATGGGGTCTCCTGCCCATCTTCCCAAGGATGCCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 72 bp ACACAAGAGCTACTCGCGCTCGGGCAGGCGCACACCTaGCTGTGTACACAGGTCCTCGCACAGCACGGCAAA +
Preference number: 3 (lower is better)
Translates to: TQELLALGQAHT*LCTQVLAQHGK
Trigger: TTTGCCGTGCTGTGCGAGGACCTGTGTACACAGGCAGGTGTGCGCCTGCCCGAGCGCGAGTAGCTCTTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 72 bp AGCTACAGGCCAGCAATGCCCTTCCTGTCCTCGGCCTaGCTCAAGGACTGGGTGCAGAGGGCATCAGCGATG +
Preference number: 3 (lower is better)
Translates to: SYRPAMPFLSSA*LKDWVQRASAM
Trigger: CATCGCTGATGCCCTCTGCACCCAGTCCTTGAGCCAGGCCGAGGACAGGAAGGGCATTGCTGGCCTGTAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CAA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCTCTTGGCTCAAGTTTaGTTAATATTAGTCACCAGT +
Preference number: 3 (lower is better)
Translates to: LERRRPREASPAGPTSHGLLAQV*LILVTS
Trigger: ACTGGTGACTAATATTAACAAAACTTGAGCCAAGAG...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR TCA 72 bp CCAAATGCAGGTGGGCTGATGGTACCGCAACCAAGTTaGGCGTTCTACCACTGCCATTGCCCCAGGGGCCCC +
Preference number: 3 (lower is better)
Translates to: PNAGGLMVPQPS*AFYHCHCPRGP
Trigger: GGGGCCCCTGGGGCAATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTACCATCAGCCCACCTGCATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 72 bp GGCCAGAGGCCTGCAGCGGGAGTCTACGCATGGGGCTaGACAAGTCAGGTGAAAATCTGCAGGGCTGGAGAG +
Preference number: 3 (lower is better)
Translates to: GQRPAAGVYAWG*TSQVKICRAGE
Trigger: CTCTCCAGCCCTGCAGATTTTCACCTGACTTGTTCAGCCCCATGCGTAGACTCCCGCTGCAGGCCTCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 72 bp GCATGGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTaGCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: AWCRWSHLVSLV*PFTPARSRALS
Trigger: GCTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR GCA 72 bp GCTTTTCGGGCTGGCCGTTTGAACCCTGAGCCTAGGTaGAGTGCAAGGGCTAGAAGCACATCGCGCCGTGGA +
Preference number: 3 (lower is better)
Translates to: AFRAGRLNPEPR*SARARSTSRRG
Trigger: TCCACGGCGCGATGTGCTTCTAGCCCTTGCACTGCACCTAGGCTCAGGGTTCAAACGGCCAGCCCGAAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp GTCTCGCATGGTGTCGTTGGTCTCATCTGGTTTCGTTaGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTC +
Preference number: 3 (lower is better)
Translates to: VSHGVVGLIWFR*SAPSPLRGAVL
Trigger: GAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 72 bp AATGTGCCTCACCCCGACAGTGGCCAGCACGGACTGTaGGCTACAGAGTTGCTTCAGCCTGAGCACTCAGCC +
Preference number: 3 (lower is better)
Translates to: NVPHPDSGQHGL*ATELLQPEHSA
Trigger: GGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTCCGTGCTGGCCACTGTCGGGGTGAGGCACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CAA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCTTGGCTCAAGTTTaGTTAATATTAGTCACCAGT +
Preference number: 3 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPALLAQV*LILVTS
Trigger: ACTGGTGACTAATATTAACAAAACTTGAGCCAAGAG...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR CCA 72 bp TGGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTaGTTTCCCCTTGGAGACATCTATGCAGACTGGAAA +
Preference number: 3 (lower is better)
Translates to: WVAPWDRSAWWP*FPLGDIYADWK
Trigger: TTTCCAGTCTGCATAGATGTCTCCAAGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR CAA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGCCAAAGGCTCCCTCTaGGAAGCGGAGTTCTGGAGA +
Preference number: 3 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGAKGSL*EAEFWR
Trigger: TCTCCAGAACTCCGCTTCCAAGAGGGAGCCTTTGGC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CAA 90 bp CTGAAGGTGGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTGCAACAGCTACTCAATaGCACGTGAGTGAAACACAC +
Preference number: 3 (lower is better)
Translates to: LKVGGPMGQECLVALVSPATATQ*HVSETH
Trigger: GTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGC...AGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR CAA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGGCCCAGGCTGGGAGCTaGACCGGCCAGACGCCCGTG +
Preference number: 3 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVAQAGS*TGQTPV
Trigger: CACGGGCGTCTGGCCGGTCAAGCTCCCAGCCTGGGC...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp TGCAAGCGTGTCTCGCATGGTGTCGTTGGTCTCATCTaGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGA +
Preference number: 3 (lower is better)
Translates to: CKRVSHGVVGLI*FRWSAPSPLRG
Trigger: TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGACACGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 72 bp AAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATaGGCAGGAGACCCCATGACACCTGGCACCTGGGCC +
Preference number: 3 (lower is better)
Translates to: KTMKTAMASLGR*AGDPMTPGTWA
Trigger: GGCCCAGGTGCCAGGTGTCATGGGGTCTCCTGCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CAA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCACAGCAATGGCATCCTaGGGAAGATGGGCAGGAGAC +
Preference number: 3 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFTAMAS*GRWAGD
Trigger: GTCTCCTGCCCATCTTCCCAAGGATGCCATTGCTGT...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 72 bp CCTCCCAGAAAGCAACTCGTAGGGAAGGGAGGGCCTTaGAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAA +
Preference number: 3 (lower is better)
Translates to: PPRKQLVGKGGP*KVPSAGWPPRK
Trigger: TTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGCCCTCCCTTCCCTACGAGTTGCTTTCTGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR GCA 72 bp CCGACAGTGGCCAGCACGGACTGTGGGCTACAGAGTTaGTTCAGCCTGAGCACTCAGCCTGAATTTGGACAT +
Preference number: 3 (lower is better)
Translates to: PTVASTDCGLQS*FSLSTQPEFGH
Trigger: ATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTCCGTGCTGGCCACTGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 72 bp CAATACCGCAACGAACAGCGTGAGGAAAGATTCTCATaGCACGGTGCGCGAAAGGGAGTCGGGACAGGCAAG +
Preference number: 3 (lower is better)
Translates to: QYRNEQREERFS*HGARKGVGTGK
Trigger: CTTGCCTGTCCCGACTCCCTTTCGCGCACCGTGGCATGAGAATCTTTCCTCACGCTGTTCGTTGCGGTATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp CAACAGTGTCTGCAAGCGTGTCTCGCATGGTGTCGTTaGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACC +
Preference number: 3 (lower is better)
Translates to: QQCLQACLAWCR*SHLVSLVCPFT
Trigger: GGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGACACGCTTGCAGACACTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 72 bp TACCAGACAACCAGTGTCTCACACGGGGGAAGACGATaGAGACAGCAATGGCATCCTTGGGAAGATGGGCAG +
Preference number: 3 (lower is better)
Translates to: YQTTSVSHGGRR*RQQWHPWEDGQ
Trigger: CTGCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 72 bp GGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTaGAACACACAGCTGGGTCCAACCACGGCTTTTCCT +
Preference number: 3 (lower is better)
Translates to: GQPGNSYSIARE*NTQLGPTTAFP
Trigger: AGGAAAAGCCGTGGTTGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 72 bp GCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTaGGTGAAACACACAGCTGGGTCCAACCACGGCTTT +
Preference number: 3 (lower is better)
Translates to: AWTAWQQLLNCT*VKHTAGSNHGF
Trigger: AAAGCCGTGGTTGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CAA 90 bp CAGTGGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACTCCAGCATTTCGGGCTGGCCGTTaGAACCCTGAGCCTAGGTGC +
Preference number: 3 (lower is better)
Translates to: QWRVFMIKLNSCVHPTPAFRAGR*NPEPRC
Trigger: GCACCTAGGCTCAGGGTTCAAACGGCCAGCCCGAAA...TGCTGGAGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 72 bp GTGAATGGCATGGATCTAAACACACATGGAGACGGATaGGCAGCGTGCGGCATGAGGAAGGTGCAGGAGAAT +
Preference number: 3 (lower is better)
Translates to: VNGMDLNTHGDG*AACGMRKVQEN
Trigger: ATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTCATCCGTCTCCATGTGTGTTTAGATCCATGCCATTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR TCA 72 bp CAACATCAATGCTCAGCAATACCGCAACGAACAGCGTaGGGAAAGATTCTCATGCCACGGTGCGCGAAAGGG +
Preference number: 3 (lower is better)
Translates to: QHQCSAIPQRTA*GKILMPRCAKG
Trigger: CCCTTTCGCGCACCGTGGCATGAGAATCTTTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CAA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGCCCTGTTCTCCCTCCTaGGCTCCTGATCTGTGGGAT +
Preference number: 3 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVPCSPS*APDLWD
Trigger: ATCCCACAGATCAGGAGCCAAGGAGGGAGAACAGGG...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CAA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACTCTTGGCTCAAGTTTaGTTAATATTAGTCACCAGT +
Preference number: 3 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGLLAQV*LILVTS
Trigger: ACTGGTGACTAATATTAACAAAACTTGAGCCAAGAG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CAA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGACTCTTGGCTCAAGTTTaGTTAATATTAGTCACCAGT +
Preference number: 3 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGLLAQV*LILVTS
Trigger: ACTGGTGACTAATATTAACAAAACTTGAGCCAAGAG...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR-3UTR CAA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCGCACTCAGCCTGAATTaGGACATAACATCAACTGAA +
Preference number: 3 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGALSLN*DITSTE
Trigger: TTCAGTTGATGTTATGTCCAAATTCAGGCTGAGTGC...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR GCA 72 bp AGATGGAGGGAAGCACATTTCCAAAACAACAGTGTCTaGAAGCGTGTCTCGCATGGTGTCGTTGGTCTCATC +
Preference number: 3 (lower is better)
Translates to: RWREAHFQNNSV*KRVSHGVVGLI
Trigger: GATGAGACCAACGACACCATGCGAGACACGCTTGCAGACACTGTTGTTTTGGAAATGTGCTTCCCTCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 72 bp TTTCCAAAACAACAGTGTCTGCAAGCGTGTCTCGCATaGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGC +
Preference number: 3 (lower is better)
Translates to: FPKQQCLQACLA*CRWSHLVSLVC
Trigger: GCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGACACGCTTGCAGACACTGTTGTTTTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR CCA 72 bp AAAGAAGCCAGTGGCTGTCATGCGCACTCAGGTCAATaGTTTGTGTGGGTTCTCCAGAGAGAGAGATTTTCC +
Preference number: 3 (lower is better)
Translates to: KEASGCHAHSGQ*FVWVLQRERFS
Trigger: GGAAAATCTCTCTCTCTGGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR-3UTR CAA 90 bp TTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAATCTCATCTGGTTTCGTaGGTCTGCCCCTTCACCCCT +
Preference number: 3 (lower is better)
Translates to: FLQININAQQYRNEQREESHLVS*VCPFTP
Trigger: AGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGA...TTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 72 bp TCTAATTGTCTTTTCCTGCACTCTGTGTGTTGGTTTTaGGTTAACTGGATACCACCGTCAGGGCCGCGTGTG +
Preference number: 3 (lower is better)
Translates to: SNCLFLHSVCWF*VNWIPPSGPRV
Trigger: CACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCAGGAAAAGACAATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
3UTR TCA 72 bp ACACAGCTTCAAATTCTAAGACAACTCAATGATCTTTaGAAAGCGTACGCTGCTGTTGCCTGGGCCGGCGAC +
Preference number: 3 (lower is better)
Translates to: TQLQILRQLNDL*KAYAAVAWAGD
Trigger: GTCGCCGGCCCAGGCAACAGCAGCGTACGCTTTTCAAAGATCATTGAGTTGTCTTAGAATTTGAAGCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CAA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCCTCTTGGCTCAAGTTTaGTTAATATTAGTCACCAGT +
Preference number: 3 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGLLAQV*LILVTS
Trigger: ACTGGTGACTAATATTAACAAAACTTGAGCCAAGAG...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR-3UTR CAA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGTCTCGCATGGTGTCGTaGGTCTCATCTGGTTTCGTT +
Preference number: 3 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVSRMVS*VSSGFV
Trigger: AACGAAACCAGATGAGACCAACGACACCATGCGAGA...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp ACAGCTACTCAATTGCACGTGAGTGAAACACACAGCTaGGTCCAACCACGGCTTTTCCTTCAAATCAACATC +
Preference number: 3 (lower is better)
Translates to: TATQLHVSETHS*VQPRLFLQINI
Trigger: GATGTTGATTTGAAGGAAAAGCCGTGGTTGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR TCA 72 bp AGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTaGGTTCTCAGGGGCCCATCCACTTTAAAAACAGAT +
Preference number: 3 (lower is better)
Translates to: RSFRCMENSAFH*VLRGPSTLKTD
Trigger: ATCTGTTTTTAAAGTGGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
3UTR GCA 72 bp ATTTTCAATCATAGAAAAAGAAGCCAGTGGCTGTCATaGGCACTCAGGTCAATGGTTTGTGTGGGTTCTCCA +
Preference number: 3 (lower is better)
Translates to: IFNHRKRSQWLS*ALRSMVCVGSP
Trigger: TGGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTTTTTCTATGATTGAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 72 bp AAACATCCGTATAATACATTTGCACCCTGTATACAATaGGTCCCTTTGAAACTGGCCAACAGTCAGCGATGG +
Preference number: 3 (lower is better)
Translates to: KHPYNTFAPCIQ*VPLKLANSQRW
Trigger: CCATCGCTGACTGTTGGCCAGTTTCAAAGGGACCCATTGTATACAGGGTGCAAATGTATTATACGGATGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR TCA 72 bp ATAATACATTTGCACCCTGTATACAATGGGTCCCTTTaGAACTGGCCAACAGTCAGCGATGGCAGATTTTCA +
Preference number: 3 (lower is better)
Translates to: IIHLHPVYNGSL*NWPTVSDGRFS
Trigger: TGAAAATCTGCCATCGCTGACTGTTGGCCAGTTTCAAAGGGACCCATTGTATACAGGGTGCAAATGTATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CCA 72 bp AATGCCACCATTATCCCTGAATTAACAAGCAGCCAGTaGCGAGTGTTCATGATAAAACTGAATTCATGTGTC +
Preference number: 3 (lower is better)
Translates to: NATIIPELTSSQ*RVFMIKLNSCV
Trigger: GACACATGAATTCAGTTTTATCATGAACACTCGCCACTGGCTGCTTGTTAATTCAGGGATAATGGTGGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
3UTR CCA 72 bp TCTGTCCAAATACTTGTGCAACAAAAAGTTAAGAAATaGAGACGAACTCCAGGTGACATTGTCATTACACAG +
Preference number: 3 (lower is better)
Translates to: SVQILVQQKVKK*RRTPGDIVITQ
Trigger: CTGTGTAATGACAATGTCACCTGGAGTTCGTCTCCATTTCTTAACTTTTTGTTGCACAAGTATTTGGACAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGTGGCCGGGCCACAGTaGCACCGGCCAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLVAGPQ*HRPGWG
Trigger: CCCCCATCCTGGCCGGTGTCACTGTGGCCCGGCCAC...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGAGGGCCAGGGGCTCGCTaGAAGGCCAAGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRGPGAR*KAKGAS
Trigger: GCTGGCTCCCTTGGCCTTGCAGCGAGCCCCTGGCCC...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGGGAGCCAAGGTGCTaGGCCGAGCGATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRWEPRC*AERCSR
Trigger: CCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCA...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGCCAAGGGAGCCAGCATaGCCGGCCGAGCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLPREPA*PAERCP
Trigger: AGGGCAGCGCTCGGCCGGTCATGCTGGCTCCCTTGG...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGTCCCGCACACGCCCTaGGAGCACGGCCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGVPHTP*EHGPHR
Trigger: TCTGTGGGGGCCGTGCTCTCAGGGCGTGTGCGGGAC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCGCAGGCCCATGGCGCTaGTCAGGAGCGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRAGPWR*SGAGAR
Trigger: CCGTGCACCCGCTCCTGAGCAGCGCCATGGGCCTGC...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCAGGCCAGCAGGCCCATaGCGCTGCTCAGGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRRPAGP*RCSGAG
Trigger: ACCCGCTCCTGAGCAGCGCCATGGGCCTGCTGGCCT...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGACGCGCGTGGAGATGCTaGGACCCTGCGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRRAWRC*DPALWE
Trigger: CTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCG...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCG +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRSHGRA*RCWDPA
Trigger: CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGA...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCTGGGCGCTCAGGGGTaGCCGGGCCACAGTGACACC +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGLGAQG*PGHSDT
Trigger: GGTGTCACTGTGGCCCGGCCACCCCTGAGCGCCCAG...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGACACCACCCTGCCGTGTaGCCCAAGGTCACACCCGGG +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRHHPAV*PKVTPG
Trigger: CCCGGGTGTGACCTTGGGCCACACGGCAGGGTGGTG...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCAGGCGAGGCGGCAGTTaGGGCGGCGGTAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGRRGGS*GGGRAA
Trigger: AGCAGCTCTACCGCCGCCTCAACTGCCGCCTCGCCT...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGAGGCGAGGCGGCAGTTaGGGCGGCGGTAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGRRGGS*GGGRAA
Trigger: AGCAGCTCTACCGCCGCCTCAACTGCCGCCTCGCCT...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTCCCGCACACGCCCTaGGAGCACGGCCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAVPHTP*EHGPHR
Trigger: TCTGTGGGGGCCGTGCTCTCAGGGCGTGTGCGGGAC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGGCCAGGGGCTCGCTaGAAGGCCAAGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAGPGAR*KAKGAS
Trigger: GCTGGCTCCCTTGGCCTTGCAGCGAGCCCCTGGCCC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCGGCCCCACCTGGCCATaGCGGGGGAGTGGACATGCT +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRGPTWP*RGSGHA
Trigger: AGCATGTCCACTCCCCCGGCATGGCCAGGTGGGGCC...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCTGCCCCTTCACCCCTaGGAGGAGCCGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRLPLHP*EEPCSE
Trigger: CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAG...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGTCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCG +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPASHGRA*RCWDPA
Trigger: CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGA...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCATCCCTCGCTCGGCGTaGGCCAGGGGCTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRIPRSA*ARGSLQ
Trigger: TTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGAT...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCACCACCCTGCCGTGTaGCCCAAGGTCACACCCGGG +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALHHPAV*PKVTPG
Trigger: CCCGGGTGTGACCTTGGGCCACACGGCAGGGTGGTG...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGACAGCCGTCCTTGTTaGACCCCGGGGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDADSRPC*TPGAGP
Trigger: GGGACCTGCCCCCGGGGTCCAACAAGGACGGCTGTC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR TCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCACCACGTCCAGCCGATaGGGGGCACGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRTTSSR*GARRAA
Trigger: AGCTGCTCTACGTGCCCCTCATCGGCTGGACGTGGT...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGAACCACGTCCAGCCGATaGGGGGCACGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRTTSSR*GARRAA
Trigger: AGCTGCTCTACGTGCCCCTCATCGGCTGGACGTGGT...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGGTGCTTGGTCTCCGTaGAGCGCGTCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALGAWSP*SASPRS
Trigger: ACTGCGAGGGGACGCGCTTCACGGAGACCAAGCACC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGGTGCTTGGTCTCCGTaGAGCGCGTCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGGAWSP*SASPRS
Trigger: ACTGCGAGGGGACGCGCTTCACGGAGACCAAGCACC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGACAGGACAGGGCAGAGTaGGGGCTCCGACTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRQDRAE*GLRLRG
Trigger: TCCTCGAAGTCGGAGCCCTCACTCTGCCCTGTCCTG...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGGTGGCCGGGCCACAGTaGCACCGGCCAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKVAGPQ*HRPGWG
Trigger: CCCCCATCCTGGCCGGTGTCACTGTGGCCCGGCCAC...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGCGAGGAGCCGTGCTCTaGGCAGGTGTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLRGAVL*AGVHRW
Trigger: CCACCTGTGCACACCTGCTCAGAGCACGGCTCCTCG...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGGACGTGCTCCCTCGCTaGAGGCCACCTGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPADVLPR*RPPARI
Trigger: GATCCGGGCAGGTGGCCTTCAGCGAGGGAGCACGTC...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCCTGCCCCTTCACCCCTaGGAGGAGCCGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRLPLHP*EEPCSE
Trigger: CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAG...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTGCCCACGGCACAGCTaGCCGAGTGGGCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGCPRHS*PSGRVE
Trigger: CTCCACCCGCCCACTCGGGCAGCTGTGCCGTGGGCA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGGGGGAGCGCATGCCCTaGCCACGGCACAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKGERMP*PRHSCP
Trigger: CGGGCAGCTGTGCCGTGGGCAGGGCATGCGCTCCCC...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTATGAGGTGTGACCCCTaGGCCTGGGCCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAMRCDP*AWASVS
Trigger: GGAGACGGAGGCCCAGGCGCAGGGGTCACACCTCAT...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCCACACAGCACTCAGTaGCCCCGGAACTCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRPHSTQ*PRNSGV
Trigger: GACGCCAGAGTTCCGGGGGCACTGAGTGCTGTGTGG...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTATCCCTCGCTCGGCGTaGGCCAGGGGCTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAIPRSA*ARGSLQ
Trigger: TTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGAT...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCAGGTGTGCACAGGTaGCGTCCCGCACACGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCAGVHR*RPAHAL
Trigger: CAGGGCGTGTGCGGGACGCCACCTGTGCACACCTGC...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCTGTGACCCCTGCGCCTaGGCCTCCGTCTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRCDPCA*ASVSTL
Trigger: TAGAGTGGAGACGGAGGCCCAGGCGCAGGGGTCACA...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGAATCCCATGGCATCTaGCCCAGCCGGTCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAESHGI*PSRSSA
Trigger: CGCGCTGGACCGGCTGGGCCAGATGCCATGGGATTC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCAGAGTCCTGCCAGGGTaGGCACCGTGGCCGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRRVLPG*APWPSS
Trigger: GGAAGACGGCCACGGTGCCCACCCTGGCAGGACTCT...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTGCACGGCCCCTCGCTaGGGACAGCCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGCTAPR*GQPSKA
Trigger: TGCCTTGGACGGCTGTCCTCAGCGAGGGGCCGTGCA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398061.5
CDS-3UTR TCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCCGTGGCCTGGTCCGTaGACAGTGTACACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALPWPGP*TVYTPC
Trigger: GCACGGAGTGTACACTGTTCACGGACCAGGCCACGG...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCAGGACAGGGCAGAGTaGGGGCTCCGACTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALQDRAE*GLRLRG
Trigger: TCCTCGAAGTCGGAGCCCTCACTCTGCCCTGTCCTG...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAGTGGCCGGGCCACAGTaGCACCGGCCAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKVAGPQ*HRPGWG
Trigger: CCCCCATCCTGGCCGGTGTCACTGTGGCCCGGCCAC...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCCAAGGGAGCCAGCATaGCCGGCCGAGCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTPREPA*PAERCP
Trigger: AGGGCAGCGCTCGGCCGGTCATGCTGGCTCCCTTGG...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCACACATGGAGACGGATaGGCAGCGTGCGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRTHGDG*AACGMR
Trigger: CCTCATGCCGCACGCTGCTCATCCGTCTCCATGTGT...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGAAACCAGATGAGGTGTaGCCCCTGCGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALKPDEV*PLRLGL
Trigger: GAGGCCCAGGCGCAGGGGTCACACCTCATCTGGTTT...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCAAACCAGATGAGGTGTaGCCCCTGCGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRKPDEV*PLRLGL
Trigger: GAGGCCCAGGCGCAGGGGTCACACCTCATCTGGTTT...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCAAACCAGATGAGGTGTaGCCCCTGCGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGKPDEV*PLRLGL
Trigger: GAGGCCCAGGCGCAGGGGTCACACCTCATCTGGTTT...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGGGAAGGGAGGGCCTTaGAAAGTGCCATCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRGKGGP*KVPSAG
Trigger: TCCTGCCGATGGCACTTTTCAAGGCCCTCCCTTCCC...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR TCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGTCCTCTGGGGTGCTGTaGTGGTCTCACTGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGSSGVL*WSHWPE
Trigger: CTCCGGCCAGTGAGACCATCACAGCACCCCAGAGGA...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR TCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTCGGCCCACAGCCTTTTaGCGTGCTCCCTCGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDARPTAF*RAPSLK
Trigger: CTTCAGCGAGGGAGCACGTCAAAAGGCTGTGGGCCG...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGACCGGAGGCACTTGACTaGGGTGGTGAAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRPEALD*GGEALG
Trigger: ACCAAGGGCTTCACCACCGCAGTCAAGTGCCTCCGG...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGGGCCCCACCTGGCCATaGCGGGGGAGTGGACATGCT +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGGPTWP*RGSGHA
Trigger: AGCATGTCCACTCCCCCGGCATGGCCAGGTGGGGCC...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGCAGCGCCTCCATCATaGAGAACGCTGCCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALAAPPS*RTLPSP
Trigger: AGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCCCTGCGAGGAGCCGTaGTCTGAGCAGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGPCEEP*SEQVCT
Trigger: TGTGCACACCTGCTCAGAGCACGGCTCCTCGCAGGG...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCCTGCCCCTTCACCCCTaGGAGGAGCCGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCLPLHP*EEPCSE
Trigger: CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAG...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGTGCCCACGGCACAGCTaGCCGAGTGGGCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPCPRHS*PSGRVE
Trigger: CTCCACCCGCCCACTCGGGCAGCTGTGCCGTGGGCA...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGAGCGTACGCTGCTGTTaGCTGGGCCGGCGACACCAA +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALSVRCC*LGRRHQ
Trigger: TTGGTGTCGCCGGCCCAGGCAACAGCAGCGTACGCT...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCCCACACAGCACTCAGTaGCCCCGGAACTCTGGCGTC +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGPHSTQ*PRNSGV
Trigger: GACGCCAGAGTTCCGGGGGCACTGAGTGCTGTGTGG...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGAGGCCAGCAGGCCCATaGCGCTGCTCAGGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGRPAGP*RCSGAG
Trigger: ACCCGCTCCTGAGCAGCGCCATGGGCCTGCTGGCCT...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGAGTCCGCGGCAGCAGGTaGTACTTGAGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRVRGSR*YLRTGS
Trigger: GCTTCCTGTCCTCAAGTACCACCTGCTGCCGCGGAC...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCTGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGTTGGAAGCGGAGTTCTaGAGAGACGGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGLEAEF*RDGVRG
Trigger: CCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCAA...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCTTGGAAGCGGAGTTCTaGAGAGACGGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGLEAEF*RDGVRG
Trigger: CCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCAA...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGTGTGACCCCTGCGCCTaGGCCTCCGTCTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLCDPCA*ASVSTL
Trigger: TAGAGTGGAGACGGAGGCCCAGGCGCAGGGGTCACA...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGTGCCCCCGGAACTCTaGCGTCTTGGGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAVPPEL*RLGSSS
Trigger: AGAGCTGGACCCAAGACGCCAGAGTTCCGGGGGCAC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGGGTAGAGCTGCTTGCTaGCCGGCCAGAGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKGRAAC*PARAPA
Trigger: CGCTGGCGCTCTGGCCGGTCAGCAAGCAGCTCTACC...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCCAGTTGGCTCCAGAGTaGGTAGGCGAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRQLAPE*VGEAAV
Trigger: AACTGCCGCCTCGCCTACTCACTCTGGAGCCAACTG...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCACCACTCCAGCAGCATaGCCAGTTGGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRTTPAA*PVGSRV
Trigger: CACTCTGGAGCCAACTGGTCATGCTGCTGGAGTGGT...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGAACCACTCCAGCAGCATaGCCAGTTGGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRTTPAA*PVGSRV
Trigger: CACTCTGGAGCCAACTGGTCATGCTGCTGGAGTGGT...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCAGGATCAGGAGAGGTaGTCCGCTGGCAAAGACGCC +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGQDQER*SAGKDA
Trigger: GGCGTCTTTGCCAGCGGATCACCTCTCCTGATCCTG...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCTGGGAGCCAAGGTGCTaGGCCGAGCGATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTWEPRC*AERCSR
Trigger: CCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCA...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATTCGAGGAATGGACCTaGCGTTCGTGCCGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRFEEWT*RSCRCA
Trigger: AGCACACCGGCACGAACGTCAGGTCCATTCCTCGAA...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCCAGGACAGGGCAGAGTaGGGGCTCCGACTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCQDRAE*GLRLRG
Trigger: TCCTCGAAGTCGGAGCCCTCACTCTGCCCTGTCCTG...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCAGGGCTCTAGAAAGTaGGGTGGGGCGTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPAQGSRK*GGAFAL
Trigger: GAGGGCGAACGCCCCACCTCACTTTCTAGAGCCCTG...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGAGCAGCGTGCGGCATaGGGAAGGTGCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALEQRAA*GRCRRI
Trigger: GATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCGAGCAGCGTGCGGCATaGGGAAGGTGCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLREQRAA*GRCRRI
Trigger: GATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTC...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGAGCAGCGTGCGGCATaGGGAAGGTGCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAEQRAA*GRCRRI
Trigger: GATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCGGGAAGGAAACCAGATaGGGTGTGACCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRGKETR*GVTPAP
Trigger: AGGCGCAGGGGTCACACCTCATCTGGTTTCCTTCCC...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCGGGCAGGAGACCCCATaGCACCTGGCACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTGQETP*HLAPGP
Trigger: AGGCCCAGGTGCCAGGTGTCATGGGGTCTCCTGCCC...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTAAGCCCCAAAAAGGGTaGATGGAGCCGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAKPQKG*MEPASA
Trigger: GGCACTGGCCGGCTCCATTCACCCTTTTTGGGGCTT...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTCCGGAGGCACTTGACTaGGGTGGTGAAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAPEALD*GGEALG
Trigger: ACCAAGGGCTTCACCACCGCAGTCAAGTGCCTCCGG...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCCGGAGGCACTTGACTaGGGTGGTGAAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALPEALD*GGEALG
Trigger: ACCAAGGGCTTCACCACCGCAGTCAAGTGCCTCCGG...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGACGGGCAGGCTTAAACTaGTCCCCTGGAAACATGCCC +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRRAGLN*SPGNMP
Trigger: GGGCATGTTTCCAGGGGAGCAGTTTAAGCCTGCCCG...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCTGCCCTCTGCTCTaGCTGGACTCTCAGAGACGT +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGRCPLL*LDSQRR
Trigger: ACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGCAGCG...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGGGGCCAGGGGCTCGCTaGAAGGCCAAGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGGPGAR*KAKGAS
Trigger: GCTGGCTCCCTTGGCCTTGCAGCGAGCCCCTGGCCC...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
71% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCAGCGCCTCCATCATaGAGAACGCTGCCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAAAPPS*RTLPSP
Trigger: AGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTCTGGTTTCGTTGGTCTaGCCCTTCACCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDALVSLV*PFTPAR
Trigger: CCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAG...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCCTGGTTTCGTTGGTCTaGCCCTTCACCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGLVSLV*PFTPAR
Trigger: CCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAG...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGGGGAGCGCATGCCCTaGCCACGGCACAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRGERMP*PRHSCP
Trigger: CGGGCAGCTGTGCCGTGGGCAGGGCATGCGCTCCCC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGAGAATCTCTGGGGTaGTCAGCCAGGGGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLGESLG*SARGAH
Trigger: ATGCGCTCCCCTGGCTGAGCACCCCAGAGATTCTCC...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGATGAGGTGTGACCCCTaGGCCTGGGCCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGMRCDP*AWASVS
Trigger: GGAGACGGAGGCCCAGGCGCAGGGGTCACACCTCAT...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCACGGAGCCGGATGTCTaGATCCCCCAGGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTTEPDV*IPQVGP
Trigger: GGGGCCGACCTGGGGGATGCAGACATCCGGCTCCGT...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGGACAAGCCAGACACCTaGCCTCCGGGCTCACATCTG +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGDKPDT*PPGSHL
Trigger: CAGATGTGAGCCCGGAGGGCAGGTGTCTGGCTTGTC...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398061.5
CDS-3UTR GCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGACACAGCCTTTTGACGTaGTCCCTCGCTGAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRHSLLT*SLAEGH
Trigger: GTGGCCTTCAGCGAGGGAGCACGTCAAAAGGCTGTG...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTCCCCCAGCTGTCTaGACGGCCCACAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRCPPAV*TAHSLL
Trigger: CAAAAGGCTGTGGGCCGTGCAGACAGCTGGGGGACA...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGTGTCCCCCAGCTGTCTaGACGGCCCACAGCCTTTTG +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGCPPAV*TAHSLL
Trigger: CAAAAGGCTGTGGGCCGTGCAGACAGCTGGGGGACA...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCAAGTCCACCACCCTaGCGTGTGGCCCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCASPPP*RVAQGH
Trigger: GTGACCTTGGGCCACACGGCAGGGTGGTGGACTTGC...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGTTCTCCTGGCCCGGGTaGCACACAGCACTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPAFSWPG*HTALSA
Trigger: GGCACTGAGTGCTGTGTGGCACCCGGGCCAGGAGAA...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCCGGAGAGCCCACGCCTaGCCTCTGGCACATGTTTCT +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGRRAHA*PLAHVS
Trigger: AGAAACATGTGCCAGAGGGCAGGCGTGGGCTCTCCG...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGGAGGGGAGAGAGTCCTaGCAGGGTGGGCACCGTGGC +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKEGRES*QGGHRG
Trigger: GCCACGGTGCCCACCCTGGCAGGACTCTCTCCCCTC...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCCTGGCTTTTATCTaGTGCCCAGACTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGALAFI*CPDWEG
Trigger: CCCCTCCCAGTCTGGGCAGCAGATAAAAGCCAGGGC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCGCGCGTGGAGATGCTaGGACCCTGCGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTRAWRC*DPALWE
Trigger: CTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCG...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGTTGGAAGCGGAGTTCTaGAGAGACGGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPALEAEF*RDGVRG
Trigger: CCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCAA...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGCCATGCCGGGGGAGTaGACATGCTGTAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALAMPGE*TCCREK
Trigger: CTTCTCCCTACAGCATGTCCACTCCCCCGGCATGGC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGCCATGCCGGGGGAGTaGACATGCTGTAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLAMPGE*TCCREK
Trigger: CTTCTCCCTACAGCATGTCCACTCCCCCGGCATGGC...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCGCAGGTGTGCACAGGTaGCGTCCCGCACACGCCCTG +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTAGVHR*RPAHAL
Trigger: CAGGGCGTGTGCGGGACGCCACCTGTGCACACCTGC...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGCACATGTTTCTCCTaGCCCGGGTGCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAGTCFS*PGCHTA
Trigger: TGCTGTGTGGCACCCGGGCCAGGAGAAACATGTGCC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCCCACGCCTGCCCTCTaGCACATGTTTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAPTPAL*HMFLLA
Trigger: GGCCAGGAGAAACATGTGCCAGAGGGCAGGCGTGGG...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCCAGTTGGCTCCAGAGTaGGTAGGCGAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCQLAPE*VGEAAV
Trigger: AACTGCCGCCTCGCCTACTCACTCTGGAGCCAACTG...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGCCGTGGCCTGGTCCGTaGACAGTGTACACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGPWPGP*TVYTPC
Trigger: GCACGGAGTGTACACTGTTCACGGACCAGGCCACGG...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGGGTGCTTGGTCTCCGTaGAGCGCGTCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPGAWSP*SASPRS
Trigger: ACTGCGAGGGGACGCGCTTCACGGAGACCAAGCACC...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGGGTGCAGAAGAGGTaGGGGGCCAGGTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAGVQKR*GARLSS
Trigger: GGAACTTAACCTGGCCCCTCACCTCTTCTGCACCCC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGCAGGGCTCTAGAAAGTaGGGTGGGGCGTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGQGSRK*GGAFAL
Trigger: GAGGGCGAACGCCCCACCTCACTTTCTAGAGCCCTG...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCAAGCCCCAAAAAGGGTaGATGGAGCCGGCCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCKPQKG*MEPASA
Trigger: GGCACTGGCCGGCTCCATTCACCCTTTTTGGGGCTT...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGTGCACGGCCCCTCGCTaGGGACAGCCGTCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKCTAPR*GQPSLL
Trigger: CAACAAGGACGGCTGTCCTCAGCGAGGGGCCGTGCA...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGGCCAGTGGGAACAGCTaGCCTCAGGGCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPASGNS*PQGFRL
Trigger: CAGCCGGAAGCCCTGAGGGCAGCTGTTCCCACTGGC...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398061.5
CDS-3UTR GCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCAAGCCGACCAGCAGGTaGAGCACGAACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGKPTSR*STNWVF
Trigger: GAAGACCCAGTTCGTGCTGCACCTGCTGGTCGGCTT...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGAAGCCGACCAGCAGGTaGAGCACGAACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLKPTSR*STNWVF
Trigger: GAAGACCCAGTTCGTGCTGCACCTGCTGGTCGGCTT...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTCCATGCTAACGCGGTaGTTGGTCTCCGTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALSMLTR*LVSVKR
Trigger: GCGCTTCACGGAGACCAAGCACCGCGTTAGCATGGA...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCCATGCTAACGCGGTaGTTGGTCTCCGTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRSMLTR*LVSVKR
Trigger: GCGCTTCACGGAGACCAAGCACCGCGTTAGCATGGA...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCTACATCATAGACAGCTaGGACTGTCCCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRYIIDS*DCPPEA
Trigger: TGCCTCCGGGGGACAGTCGCAGCTGTCTATGATGTA...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGCGGGCAGGCTTAAACTaGTCCCCTGGAAACATGCCC +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLRAGLN*SPGNMP
Trigger: GGGCATGTTTCCAGGGGAGCAGTTTAAGCCTGCCCG...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCATFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCCGCTGCCCTCTGCTCTaGCTGGACTCTCAGAGACGT +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCRCPLL*LDSQRR
Trigger: ACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGCAGCG...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTGCTCTGAGCAGGTGTaGACAGGTGGCGTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGCSEQV*TGGVPH
Trigger: GTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCATTCTCATGCCACGGTaGGCGAAAGGGAGTCGGGAC +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGILMPR*AKGSRD
Trigger: GTCCCGACTCCCTTTCGCGCACCGTGGCATGAGAAT...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTACACGGCCGGGGACGTaGTGTTTCCAGAAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDATRPGT*CFQKEG
Trigger: GCCTTCTTTCTGGAAACAGCACGTCCCCGGCCGTGT...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTTCTCCTGGCCCGGGTaGCACACAGCACTCAGTGCC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGFSWPG*HTALSA
Trigger: GGCACTGAGTGCTGTGTGGCACCCGGGCCAGGAGAA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR GCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCCGGAGAGCCCACGCCTaGCCTCTGGCACATGTTTCT +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCRRAHA*PLAHVS
Trigger: AGAAACATGTGCCAGAGGGCAGGCGTGGGCTCTCCG...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGGCCAGCAGGCCCATaGCGCTGCTCAGGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGRPAGP*RCSGAG
Trigger: ACCCGCTCCTGAGCAGCGCCATGGGCCTGCTGGCCT...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGAGGTGCAGCACGAACTaGGTCTTCAGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALRCSTN*VFRKAS
Trigger: GCTGGCCTTCCTGAAGACCCAGTTCGTGCTGCACCT...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGAGGTGCAGCACGAACTaGGTCTTCAGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLRCSTN*VFRKAS
Trigger: GCTGGCCTTCCTGAAGACCCAGTTCGTGCTGCACCT...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCCAGCGTGCACAGCTaGACGAAGTTGATGACCAGA +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRASVHS*TKLMTR
Trigger: TCTGGTCATCAACTTCGTCCAGCTGTGCACGCTGGC...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTCCGCGGCAGCAGGTaGTACTTGAGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAVRGSR*YLRTGS
Trigger: GCTTCCTGTCCTCAAGTACCACCTGCTGCCGCGGAC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGGGGAGACAGGAGAATaGTGGCCCAGGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALGETGE*WPRTGS
Trigger: ACTTCCTGTCCTGGGCCACCATTCTCCTGTCTCCCC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGTGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPAWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCTGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTTGGAAGCGGAGTTCTaGAGAGACGGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGLEAEF*RDGVRG
Trigger: CCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCAA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCCAAAGGCTCCCTCTTaGAAGCGGAGTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRPKAPS*KRSSGE
Trigger: CTCTCCAGAACTCCGCTTCCAAGAGGGAGCCTTTGG...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAATCCCTCGCTCGGCGTaGGCCAGGGGCTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKIPRSA*ARGSLQ
Trigger: TTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGAT...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCCGAGTGGGCGGGTaGAGGGATGAGATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGARVGG*RDEISD
Trigger: ATCTGAAATCTCATCCCTCCACCCGCCCACTCGGGC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGTGCAGGAGAATCTCTaGGGTGCTCAGCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCVQENL*GAQPGE
Trigger: CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCAC...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGCAGGAGAATCTCTaGGGTGCTCAGCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAVQENL*GAQPGE
Trigger: CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCAC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTTTCCTGTCCTCGGCCTaGCTCAAGGACTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAFLSSA*LKDWVQ
Trigger: CTGCACCCAGTCCTTGAGCCAGGCCGAGGACAGGAA...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGTGTGGCGCCTGGCTCTaGGTGGGTAACAGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPACGAWL*VGNRSY
Trigger: GTAGCTCCTGTTACCCACCCAGAGCCAGGCGCCACA...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCAGCAATGGCATCCTTaGGAAGATGGGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRQQWHP*EDGQET
Trigger: GGTCTCCTGCCCATCTTCCCAAGGATGCCATTGCTG...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCCCCACGGCAGGGGTATaGGGCAGAGCCAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFPTAGV*GRARAE
Trigger: CTCCGCCCTGGCTCTGCCCCATACCCCTGCCGTGGG...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAACCCACGGCAGGGGTATaGGGCAGAGCCAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQPTAGV*GRARAE
Trigger: CTCCGCCCTGGCTCTGCCCCATACCCCTGCCGTGGG...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGTGCCATCGGCAGGATaGCCTCCAAGGAAACAGAGC +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLVPSAG*PPRKQS
Trigger: GCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCAC...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGGCTGGCTTCAGCCCTaGAGCCCAATTCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALGWLQP*SPILGA
Trigger: TGCTCCTAGAATTGGGCTCCAGGGCTGAAGCCAGCC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGACCCAAAAAGGGTGAATaGAGCCGGCCAGTGCCAGAT +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRPKKGE*SRPVPD
Trigger: ATCTGGCACTGGCCGGCTCCATTCACCCTTTTTGGG...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGTGCACGGCCCCTCGCTaGGGACAGCCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRCTAPR*GQPSKA
Trigger: TGCCTTGGACGGCTGTCCTCAGCGAGGGGCCGTGCA...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398061.5
CDS-3UTR TCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTTTCGAGGAATGGACCTaGCGTTCGTGCCGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAFEEWT*RSCRCA
Trigger: AGCACACCGGCACGAACGTCAGGTCCATTCCTCGAA...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGCAGGGCTCTAGAAAGTaGGGTGGGGCGTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPQGSRK*GGAFAL
Trigger: GAGGGCGAACGCCCCACCTCACTTTCTAGAGCCCTG...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGTACCGCAACCAAGTTaGGCGTTCTACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRVPQPS*AFYHCH
Trigger: ATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTAC...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAACGAGGAGCCGTGCTCTaGGCAGGTGTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKRGAVL*AGVHRW
Trigger: CCACCTGTGCACACCTGCTCAGAGCACGGCTCCTCG...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCGGGCAGGAGACCCCATaGCACCTGGCACCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFGQETP*HLAPGP
Trigger: AGGCCCAGGTGCCAGGTGTCATGGGGTCTCCTGCCC...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCTGCACGGCCCCTCGCTaGGGACAGCCGTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTCTAPR*GQPSFS
Trigger: AGAAAAGGACGGCTGTCCTCAGCGAGGGGCCGTGCA...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGACAGTGTACACTCCGTaGAGGACCACCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLTVYTP*RTTTPA
Trigger: TGCTGGAGTGGTGGTCCTGCACGGAGTGTACACTGT...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTACATCATAGACAGCTaGGACTGTCCCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRYIIDS*DCPPEA
Trigger: TGCCTCCGGGGGACAGTCGCAGCTGTCTATGATGTA...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTACATCATAGACAGCTaGGACTGTCCCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALYIIDS*DCPPEA
Trigger: TGCCTCCGGGGGACAGTCGCAGCTGTCTATGATGTA...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGTACATCATAGACAGCTaGGACTGTCCCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLYIIDS*DCPPEA
Trigger: TGCCTCCGGGGGACAGTCGCAGCTGTCTATGATGTA...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCGGGCAGGCTTAAACTaGTCCCCTGGAAACATGCCC +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCARAGLN*SPGNMP
Trigger: GGGCATGTTTCCAGGGGAGCAGTTTAAGCCTGCCCG...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCGGCCCCACCTGGCCATaGCGGGGGAGTGGACATGCT +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFGPTWP*RGSGHA
Trigger: AGCATGTCCACTCCCCCGGCATGGCCAGGTGGGGCC...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGTGCTCTGAGCAGGTGTaGACAGGTGGCGTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPCSEQV*TGGVPH
Trigger: GTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCA...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAACTGCCCCTTCACCCCTaGGAGGAGCCGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKLPLHP*EEPCSE
Trigger: CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAG...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCGCACACATGTCAACGTaGTTGCGCAGGACTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRAHMST*LRRTGE
Trigger: CTCTCCAGTCCTGCGCAAGCACGTTGACATGTGTGC...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327505.6
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTTGTCTCCTCTGGGGTaGTGTGATGGTCTCACTGGC +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRLSPLG*CDGLTG
Trigger: GCCAGTGAGACCATCACAGCACCCCAGAGGAGACAA...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR GCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGTCGCTGAAGGCCACCTaGCCGGATCATCAACCTCTA +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLSLKAT*PDHQPL
Trigger: TAGAGGTTGATGATCCGGGCAGGTGGCCTTCAGCGA...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTTCGCTGAAGGCCACCTaGCCGGATCATCAACCTCTA +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDASLKAT*PDHQPL
Trigger: TAGAGGTTGATGATCCGGGCAGGTGGCCTTCAGCGA...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGCCAGCGTGCACAGCTaGACGAAGTTGATGACCAGA +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALASVHS*TKLMTR
Trigger: TCTGGTCATCAACTTCGTCCAGCTGTGCACGCTGGC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGGCCAGCGTGCACAGCTaGACGAAGTTGATGACCAGA +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGASVHS*TKLMTR
Trigger: TCTGGTCATCAACTTCGTCCAGCTGTGCACGCTGGC...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCGCTCTACCGTGGCCTaGTCCGTGAACAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCARSTVA*SVNSVH
Trigger: GTGTACACTGTTCACGGACCAGGCCACGGTAGAGCG...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCGAAGCGCTCACACATaGTCCACCCACAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALRSAHT*STHRGS
Trigger: ACTTCCTCTGTGGGTGGACCATGTGTGAGCGCTTCG...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTCGAAGCGCTCACACATaGTCCACCCACAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDARSAHT*STHRGS
Trigger: ACTTCCTCTGTGGGTGGACCATGTGTGAGCGCTTCG...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGGGGAGACAGGAGAATaGTGGCCCAGGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCGETGE*WPRTGS
Trigger: ACTTCCTGTCCTGGGCCACCATTCTCCTGTCTCCCC...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGAGAGGTGATCCGCTaGCAAAGACGCCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLGEVIR*QRRPRQ
Trigger: TTGTCTTGGGCGTCTTTGCCAGCGGATCACCTCTCC...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTCCAAAGGCTCCCTCTTaGAAGCGGAGTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAPKAPS*KRSSGE
Trigger: CTCTCCAGAACTCCGCTTCCAAGAGGGAGCCTTTGG...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCCAAAGGCTCCCTCTTaGAAGCGGAGTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGPKAPS*KRSSGE
Trigger: CTCTCCAGAACTCCGCTTCCAAGAGGGAGCCTTTGG...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGCCAAAGGCTCCCTCTTaGAAGCGGAGTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLPKAPS*KRSSGE
Trigger: CTCTCCAGAACTCCGCTTCCAAGAGGGAGCCTTTGG...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGCCCCAGCACCCAGTGTaGAGGGACCAGGATCTGACA +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGPQHPV*RDQDLT
Trigger: TGTCAGATCCTGGTCCCTCCACACTGGGTGCTGGGG...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAATCCCTCGCTCGGCGTaGGCCAGGGGCTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQIPRSA*ARGSLQ
Trigger: TTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGAT...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCCTCATCTGGTTTCGTTaGTCTGCCCCTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRLIWFR*SAPSPL
Trigger: CAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAG...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCCTCATCTGGTTTCGTTaGTCTGCCCCTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGLIWFR*SAPSPL
Trigger: CAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAG...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCCCGAGTGGGCGGGTaGAGGGATGAGATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAARVGG*RDEISD
Trigger: ATCTGAAATCTCATCCCTCCACCCGCCCACTCGGGC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGTGTGACCCCTGCGCCTaGGCCTCCGTCTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKCDPCA*ASVSTL
Trigger: TAGAGTGGAGACGGAGGCCCAGGCGCAGGGGTCACA...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGCCTCACCCCGACAGTaGCCAGCACGGACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRASPRQ*PARTVG
Trigger: GCCCACAGTCCGTGCTGGCCACTGTCGGGGTGAGGC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGCTGGCTTCAGCCCTaGAGCCCAATTCTAGGAGCA +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAGWLQP*SPILGA
Trigger: TGCTCCTAGAATTGGGCTCCAGGGCTGAAGCCAGCC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGGAACTCTGGCGTCTTaGGTCCAGCTCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGGTLAS*VQLSSK
Trigger: CTTTGAGGAGAGCTGGACCCAAGACGCCAGAGTTCC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGGAACTCTGGCGTCTTaGGTCCAGCTCTCCTCAAAG +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALGTLAS*VQLSSK
Trigger: CTTTGAGGAGAGCTGGACCCAAGACGCCAGAGTTCC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCAAACACAGAATCCCATaGCATCTGGCCCAGCCGGTC +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGKHRIP*HLAQPV
Trigger: GACCGGCTGGGCCAGATGCCATGGGATTCTGTGTTT...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCCGGGGGCAGGTCCCTaGCTGGAGTGTGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRPGAGP*LECVSS
Trigger: GCTGCTCACACACTCCAGCCAGGGACCTGCCCCCGG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR TCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAACAGGACAGGGCAGAGTaGGGGCTCCGACTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKQDRAE*GLRLRG
Trigger: TCCTCGAAGTCGGAGCCCTCACTCTGCCCTGTCCTG...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCGTACCGCAACCAAGTTaGGCGTTCTACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRVPQPS*AFYHCH
Trigger: ATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTAC...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGGTACCGCAACCAAGTTaGGCGTTCTACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGVPQPS*AFYHCH
Trigger: ATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTAC...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGACACATGGAGACGGATaGGCAGCGTGCGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPTHGDG*AACGMR
Trigger: CCTCATGCCGCACGCTGCTCATCCGTCTCCATGTGT...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCACAAGCTAAGCTGTaGGATGGGAAGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRAQAKL*DGKETR
Trigger: TCTGGTTTCCTTCCCATCTCACAGCTTAGCTTGTGC...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGCCGCAACGAACAGCGTaGGGAAAGATTCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLPQRTA*GKILMP
Trigger: TGGCATGAGAATCTTTCCTCACGCTGTTCGTTGCGG...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGACTACTCAATTGCACGTaGGTGAAACACACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRLLNCT*VKHTAG
Trigger: CCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAG...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGTCTACGCATGGGGCTaGACAAGTCAGGTGAAAATC +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRVYAWG*TSQVKI
Trigger: GATTTTCACCTGACTTGTTCAGCCCCATGCGTAGAC...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCCTCTGGTCCATCACCTaGACCTCTGGGCTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGLWSIT*TSGLES
Trigger: ACTTTCTAGCCCAGAGGTTCAGGTGATGGACCAGAG...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAATCCGTGGCTGCTGAGTaGCCCCCACGGCATGGACGT +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQSVAAE*PPRHGR
Trigger: ACGTCCATGCCGTGGGGGTCACTCAGCAGCCACGGA...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR GCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTAGGATGATGACTGCGTaGTCCTTCCCAAAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDARMMTA*SFPKRS
Trigger: AGAGCGCTTTGGGAAGGAGCACGCAGTCATCATCCT...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCAGGATGATGACTGCGTaGTCCTTCCCAAAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRRMMTA*SFPKRS
Trigger: AGAGCGCTTTGGGAAGGAGCACGCAGTCATCATCCT...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGAGGATGATGACTGCGTaGTCCTTCCCAAAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALRMMTA*SFPKRS
Trigger: AGAGCGCTTTGGGAAGGAGCACGCAGTCATCATCCT...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCTACATCATAGACAGCTaGGACTGTCCCCCGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCYIIDS*DCPPEA
Trigger: TGCCTCCGGGGGACAGTCGCAGCTGTCTATGATGTA...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGAATGAAGCCACTGAGCTaGTTCCTTTTCATCCAGCGG +
Preference number: 4 (lower is better)
Translates to: RPREASPAGPTSHGRAWRMKPLS*FLFIQR
Trigger: CCGCTGGATGAAAAGGAAGCAGCTCAGTGGCTTCAT...TCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTTFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPTFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGCATCATGCAGAACGCTaGCGTCCCCTCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGHHAER*RPLQSP
Trigger: GGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATG...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCTGGTTTCGTTGGTCTaGCCCTTCACCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTLVSLV*PFTPAR
Trigger: CCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAG...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGGGAGAATCTCTGGGGTaGTCAGCCAGGGGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPGESLG*SARGAH
Trigger: ATGCGCTCCCCTGGCTGAGCACCCCAGAGATTCTCC...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGATGAGGTGTGACCCCTaGGCCTGGGCCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRMRCDP*AWASVS
Trigger: GGAGACGGAGGCCCAGGCGCAGGGGTCACACCTCAT...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGAGGAAAGATTCTCATaGCACGGTGCGCGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAEERFS*HGARKG
Trigger: TCCCTTTCGCGCACCGTGGCATGAGAATCTTTCCTC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGAGGAAAGATTCTCATaGCACGGTGCGCGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGEERFS*HGARKG
Trigger: TCCCTTTCGCGCACCGTGGCATGAGAATCTTTCCTC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAAGCGTACGCTGCTGTTaGCTGGGCCGGCGACACCAA +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKSVRCC*LGRRHQ
Trigger: TTGGTGTCGCCGGCCCAGGCAACAGCAGCGTACGCT...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGAGGTGCAGCACGAACTaGGTCTTCAGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGRCSTN*VFRKAS
Trigger: GCTGGCCTTCCTGAAGACCCAGTTCGTGCTGCACCT...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCGAAGCGCTCACACATaGTCCACCCACAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCARSAHT*STHRGS
Trigger: ACTTCCTCTGTGGGTGGACCATGTGTGAGCGCTTCG...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGTCGTTGGTCTCATCTaGTTTCGTTGGTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAVVGLI*FRWSAP
Trigger: AGGGGCAGACCAACGAAACCAGATGAGACCAACGAC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGTCGTTGGTCTCATCTaGTTTCGTTGGTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALVVGLI*FRWSAP
Trigger: AGGGGCAGACCAACGAAACCAGATGAGACCAACGAC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCTCGCATGGTGTCGTTaGTCTCATCTGGTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRLAWCR*SHLVSL
Trigger: CAACGAAACCAGATGAGACCAACGACACCATGCGAG...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGTACGCTGCTGTTGCCTaGGCCGGCGACACCAATGTC +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPYAAVA*AGDTNV
Trigger: GACATTGGTGTCGCCGGCCCAGGCAACAGCAGCGTA...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGGTCCCAGCCTCTGTGTaGATGCAGCTTCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKVPASV*MQLPLE
Trigger: CTCGAGGGGAAGCTGCATCCACACAGAGGCTGGGAC...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGCAGTTGGCTCCAGAGTaGGTAGGCGAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGQLAPE*VGEAAV
Trigger: AACTGCCGCCTCGCCTACTCACTCTGGAGCCAACTG...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAACAGGATCAGGAGAGGTaGTCCGCTGGCAAAGACGCC +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKQDQER*SAGKDA
Trigger: GGCGTCTTTGCCAGCGGATCACCTCTCCTGATCCTG...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAACAGGGCTCTAGAAAGTaGGGTGGGGCGTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQQGSRK*GGAFAL
Trigger: GAGGGCGAACGCCCCACCTCACTTTCTAGAGCCCTG...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGAAGATGAGGGCGCTGTaGCTTAGAACAAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGKMRAL*LRTSKS
Trigger: CGACTTGCTTGTTCTAAGTCACAGCGCCCTCATCTT...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGGAGCAGCGTGCGGCATaGGGAAGGTGCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGEQRAA*GRCRRI
Trigger: GATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTC...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGGGGAAGGAAACCAGATaGGGTGTGACCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGGKETR*GVTPAP
Trigger: AGGCGCAGGGGTCACACCTCATCTGGTTTCCTTCCC...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGCACAAGCTAAGCTGTaGGATGGGAAGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAAQAKL*DGKETR
Trigger: TCTGGTTTCCTTCCCATCTCACAGCTTAGCTTGTGC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTCTACTCAATTGCACGTaGGTGAAACACACAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDALLNCT*VKHTAG
Trigger: CCCAGCTGTGTGTTTCACTCACGTGCAATTGAGTAG...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCTGAACAAGTCAGGTaGAAATCTGCAGGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAAEQVR*KSAGLE
Trigger: CTCCAGCCCTGCAGATTTTCACCTGACTTGTTCAGC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGTGCACGGCCCCTCGCTaGGGACAGCCGTCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRCTAPR*GQPSFS
Trigger: AGAAAAGGACGGCTGTCCTCAGCGAGGGGCCGTGCA...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR GCA 90 bp CTGAAGGTGGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTGCCAGTGGGAACAGCTaGCCTCAGGGCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LKVGGPMGQECLVALVSPASGNS*PQGFRL
Trigger: CAGCCGGAAGCCCTGAGGGCAGCTGTTCCCACTGGC...AGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCCCTCCCACTTCCGCTTaGAGAACACAATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRPPTSA*RTQSPE
Trigger: TTCTGGAGATTGTGTTCTGCAAGCGGAAGTGGGAGG...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGCCGGAGGCACTTGACTaGGGTGGTGAAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGPEALD*GGEALG
Trigger: ACCAAGGGCTTCACCACCGCAGTCAAGTGCCTCCGG...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGATGAAGCCACTGAGCTaGTTCCTTTTCATCCAGCGG +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLMKPLS*FLFIQR
Trigger: CCGCTGGATGAAAAGGAAGCAGCTCAGTGGCTTCAT...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGCGGGCAGGCTTAAACTaGTCCCCTGGAAACATGCCC +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKRAGLN*SPGNMP
Trigger: GGGCATGTTTCCAGGGGAGCAGTTTAAGCCTGCCCG...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCCCGAGCGCTGCCCTCTaGTCTGCCTGGACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFPSAAL*SAWTLR
Trigger: TCTGAGAGTCCAGGCAGAGCAGAGGGCAGCGCTCGG...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGGGCCCCACCTGGCCATaGCGGGGGAGTGGACATGCT +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEGPTWP*RGSGHA
Trigger: AGCATGTCCACTCCCCCGGCATGGCCAGGTGGGGCC...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCAAGTCGAAAGCCAAATaGAGGTGGGCTGATGGTACC +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGKSKAK*RWADGT
Trigger: GGTACCATCAGCCCACCTGCATTTGGCTTTCGACTT...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGCATCATGCAGAACGCTaGCGTCCCCTCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPHHAER*RPLQSP
Trigger: GGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATG...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCCCCTGCGAGGAGCCGTaGTCTGAGCAGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFPCEEP*SEQVCT
Trigger: TGTGCACACCTGCTCAGAGCACGGCTCCTCGCAGGG...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCGGGCAGGCGCACACCTaGCTGTGTACACAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFGQAHT*LCTQVL
Trigger: GAGGACCTGTGTACACAGGCAGGTGTGCGCCTGCCC...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGCAAGTCCACCACCCTaGCGTGTGGCCCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRASPPP*RVAQGH
Trigger: GTGACCTTGGGCCACACGGCAGGGTGGTGGACTTGC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR CCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAACCCCAGCACCCAGTGTaGAGGGACCAGGATCTGACA +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKPQHPV*RDQDLT
Trigger: TGTCAGATCCTGGTCCCTCCACACTGGGTGCTGGGG...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGCCTGTTCTCCCTCCTTaGCTCCTGATCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGPVLPP*LLICGM
Trigger: CATCCCACAGATCAGGAGCCAAGGAGGGAGAACAGG...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCTCGCATGGTGTCGTTaGTCTCATCTGGTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALLAWCR*SHLVSL
Trigger: CAACGAAACCAGATGAGACCAACGACACCATGCGAG...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGATCTAAACACACATaGAGACGGATGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAGSKHT*RRMSSV
Trigger: CACGCTGCTCATCCGTCTCCATGTGTGTTTAGATCC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGGATCTAAACACACATaGAGACGGATGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGGSKHT*RRMSSV
Trigger: CACGCTGCTCATCCGTCTCCATGTGTGTTTAGATCC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGTGCCCAGCTCCGCCATaGCTCAGTGCAGAATTTATA +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGCPAPP*LSAEFI
Trigger: TATAAATTCTGCACTGAGCCATGGCGGAGCTGGGCA...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAGTCCCAGCCTCTGTGTaGATGCAGCTTCCCCTCGAG +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKVPASV*MQLPLE
Trigger: CTCGAGGGGAAGCTGCATCCACACAGAGGCTGGGAC...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR CCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAACCAGGGTGGGCACCGTaGCCGTCTTCCCGTTCTCAT +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQPGWAP*PSSRSH
Trigger: ATGAGAACGGGAAGACGGCCACGGTGCCCACCCTGG...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR TCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAACCACTCCAGCAGCATaGCCAGTTGGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKTTPAA*PVGSRV
Trigger: CACTCTGGAGCCAACTGGTCATGCTGCTGGAGTGGT...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGGGGTGCAGAAGAGGTaGGGGGCCAGGTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRGVQKR*GARLSS
Trigger: GGAACTTAACCTGGCCCCTCACCTCTTCTGCACCCC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGAACTCTGCATTTCACTaGGTTCTCAGGGGCCCATCC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGNSAFH*VLRGPS
Trigger: GGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTT...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGAGAGTTGCTTCAGCCTaGGCACTCAGCCTGAATTTG +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPARVASA*ALSLNL
Trigger: CAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCT...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGGTCTACGCATGGGGCTaGACAAGTCAGGTGAAAATC +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPAVYAWG*TSQVKI
Trigger: GATTTTCACCTGACTTGTTCAGCCCCATGCGTAGAC...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCCCTCCCACTTCCGCTTaGAGAACACAATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCPPTSA*RTQSPE
Trigger: TTCTGGAGATTGTGTTCTGCAAGCGGAAGTGGGAGG...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCGCTGCCCTCTGCTCTaGCTGGACTCTCAGAGACGT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRRCPLL*LDSQRR
Trigger: ACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGCAGCG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGGGGCCAGGGGCTCGCTaGAAGGCCAAGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEGPGAR*KAKGAS
Trigger: GCTGGCTCCCTTGGCCTTGCAGCGAGCCCCTGGCCC...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGGAGAATCTCTGGGGTaGTCAGCCAGGGGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRGESLG*SARGAH
Trigger: ATGCGCTCCCCTGGCTGAGCACCCCAGAGATTCTCC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAGCTACAGGCCAGCAATaGCCTTCCTGTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQATGQQ*PSCPRP
Trigger: AGGCCGAGGACAGGAAGGGCATTGCTGGCCTGTAGC...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGGAGGGCCCGGGACAGTaGCTACGGCCGCTCACGGCA +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGEGPGQ*LRPLTA
Trigger: TGCCGTGAGCGGCCGTAGGCACTGTCCCGGGCCCTC...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCATGACCCAGAGTCTCTaGAAGCCAGGACGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTMTQSL*KPGRQK
Trigger: CTTCTGCCGTCCTGGCTTGCAGAGACTCTGGGTCAT...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCGATCTCGAAGTTGTaGTTGAGGATGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRSISKL*LRMMTA
Trigger: CGCAGTCATCATCCTCAACCACAACTTCGAGATCGA...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCTTAAACTGCTCCCCTaGAAACATGCCCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRLKLLP*KHALLI
Trigger: AATCAGAAGGGCATGTTTCCAGGGGAGCAGTTTAAG...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGTCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCG +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSESHGRA*RCWDPA
Trigger: CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGA...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGCCTGTTCTCCCTCCTTaGCTCCTGATCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKPVLPP*LLICGM
Trigger: CATCCCACAGATCAGGAGCCAAGGAGGGAGAACAGG...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGCCCTCTGCTCTGCCTaGACTCTCAGAGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRALCSA*TLRDVQ
Trigger: CTGGACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAGCCCTCTGCTCTGCCTaGACTCTCAGAGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQALCSA*TLRDVQ
Trigger: CTGGACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGC...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGGTCGTTGGTCTCATCTaGTTTCGTTGGTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGVVGLI*FRWSAP
Trigger: AGGGGCAGACCAACGAAACCAGATGAGACCAACGAC...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCTGTGGCGCCTGGCTCTaGGTGGGTAACAGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFCGAWL*VGNRSY
Trigger: GTAGCTCCTGTTACCCACCCAGAGCCAGGCGCCACA...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACTGGGCCCTCCCGCCTaGGAGCCTCCAGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGLGPPA*EPPVWR
Trigger: GCGCCACACTGGAGGCTCCCAGGCGGGAGGGCCCAG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGCAGCAATGGCATCCTTaGGAAGATGGGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPQQWHP*EDGQET
Trigger: GGTCTCCTGCCCATCTTCCCAAGGATGCCATTGCTG...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGCAGGCATGGACAGCCTaGCAACAGCTACTCAATTGC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGQAWTA*QQLLNC
Trigger: GCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCCTG...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCCGTGGCCTGGTCCGTaGACAGTGTACACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEPWPGP*TVYTPC
Trigger: GCACGGAGTGTACACTGTTCACGGACCAGGCCACGG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCGGAAACATGCCCTTCTaGTTATATATCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRGNMPF*LYISWS
Trigger: GCTCCAGGAGATATATAATCAGAAGGGCATGTTTCC...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGGAAACATGCCCTTCTaGTTATATATCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGGNMPF*LYISWS
Trigger: GCTCCAGGAGATATATAATCAGAAGGGCATGTTTCC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGAAACATGCCCTTCTaGTTATATATCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDAGNMPF*LYISWS
Trigger: GCTCCAGGAGATATATAATCAGAAGGGCATGTTTCC...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGACCAAGGGAGCCAGCATaGCCGGCCGAGCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGPREPA*PAERCP
Trigger: AGGGCAGCGCTCGGCCGGTCATGCTGGCTCCCTTGG...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGGTACCGCAACCAAGTTaGGCGTTCTACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPVPQPS*AFYHCH
Trigger: ATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTAC...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGTCCCGCACACGCCCTaGGAGCACGGCCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGVPHTP*EHGPHR
Trigger: TCTGTGGGGGCCGTGCTCTCAGGGCGTGTGCGGGAC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGTCCCGCACACGCCCTaGGAGCACGGCCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGVPHTP*EHGPHR
Trigger: TCTGTGGGGGCCGTGCTCTCAGGGCGTGTGCGGGAC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCCAGGCTGGGAGCTTaGCCGGCCAGACGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFPRLGA*PARRPW
Trigger: CCACGGGCGTCTGGCCGGTCAAGCTCCCAGCCTGGG...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTCAATTGCACGTGAGTaGAACACACAGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGSIARE*NTQLGP
Trigger: TGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGAAGCCGACCAGCAGGTaGAGCACGAACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRKPTSR*STNWVF
Trigger: GAAGACCCAGTTCGTGCTGCACCTGCTGGTCGGCTT...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGACAGTGTACACTCCGTaGAGGACCACCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGTVYTP*RTTTPA
Trigger: TGCTGGAGTGGTGGTCCTGCACGGAGTGTACACTGT...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGAGGATGATGACTGCGTaGTCCTTCCCAAAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKRMMTA*SFPKRS
Trigger: AGAGCGCTTTGGGAAGGAGCACGCAGTCATCATCCT...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAATCCATGCTAACGCGGTaGTTGGTCTCCGTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQSMLTR*LVSVKR
Trigger: GCGCTTCACGGAGACCAAGCACCGCGTTAGCATGGA...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCTCCATGCTAACGCGGTaGTTGGTCTCCGTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFSMLTR*LVSVKR
Trigger: GCGCTTCACGGAGACCAAGCACCGCGTTAGCATGGA...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAACATCATGCAGAACGCTaGCGTCCCCTCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQHHAER*RPLQSP
Trigger: GGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATG...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGTGCTCTGAGCAGGTGTaGACAGGTGGCGTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGECSEQV*TGGVPH
Trigger: GTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCA...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGGGGGAGCGCATGCCCTaGCCACGGCACAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRGERMP*PRHSCP
Trigger: CGGGCAGCTGTGCCGTGGGCAGGGCATGCGCTCCCC...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTCCAGGTCACATATGTaGATGGTCGTACCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGSRSHM*MVVPFS
Trigger: GCTGAAGGGTACGACCATGCACATATGTGACCTGGA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCAGGTGCAGCACGAACTaGGTCTTCAGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFRCSTN*VFRKAS
Trigger: GCTGGCCTTCCTGAAGACCCAGTTCGTGCTGCACCT...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTTCGATCTCGAAGTTGTaGTTGAGGATGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCASISKL*LRMMTA
Trigger: CGCAGTCATCATCCTCAACCACAACTTCGAGATCGA...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGGGGAGACAGGAGAATaGTGGCCCAGGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRGETGE*WPRTGS
Trigger: ACTTCCTGTCCTGGGCCACCATTCTCCTGTCTCCCC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCCTTGGTTTCCGTAGCTaGAGCCTTTTTCTATCTCAG +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRLGFRS*SLFLSQ
Trigger: CTGAGATAGAAAAAGGCTCCAGCTACGGAAACCAAG...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGCGCGCGTGGAGATGCTaGGACCCTGCGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGRAWRC*DPALWE
Trigger: CTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCG...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GCCTTGAAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCCGTGGGATCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCG +
Preference number: 4 (lower is better)
Translates to: ALKSAIGRMASKETEPVGSHGRA*RCWDPA
Trigger: CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGA...TCCCACGGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGGAGCTTTAGGTGCATaGAGAACTCTGCATTTCACT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALGALGA*RTLHFT
Trigger: AGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCC...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGGGAGCTTTAGGTGCATaGAGAACTCTGCATTTCACT +
Preference number: 4 (lower is better)
Translates to: LERRRPREASPAGPTSHGGALGA*RTLHFT
Trigger: AGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCC...CCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACTGGGCGCTCAGGGGTaGCCGGGCCACAGTGACACC +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGLGAQG*PGHSDT
Trigger: GGTGTCACTGTGGCCCGGCCACCCCTGAGCGCCCAG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGATCCCTCGCTCGGCGTaGGCCAGGGGCTCGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEIPRSA*ARGSLQ
Trigger: TTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGAT...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAACTCATCTGGTTTCGTTaGTCTGCCCCTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKLIWFR*SAPSPL
Trigger: CAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAG...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGCAAGCGTGTCTCGCATaGTGTCGTTGGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPQACLA*CRWSHL
Trigger: CAGATGAGACCAACGACACCATGCGAGACACGCTTG...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGGCCCGAGTGGGCGGGTaGAGGGATGAGATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRARVGG*RDEISD
Trigger: ATCTGAAATCTCATCCCTCCACCCGCCCACTCGGGC...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTGCCCAGCTCCGCCATaGCTCAGTGCAGAATTTATA +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGCPAPP*LSAEFI
Trigger: TATAAATTCTGCACTGAGCCATGGCGGAGCTGGGCA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGTGGGAGCCTCCAGTGTaGCGCCTGGCTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEWEPPV*RLALGG
Trigger: CCCACCCAGAGCCAGGCGCCACACTGGAGGCTCCCA...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCATAGGGTGCGCGTCTaGTACACTGTCGCCGAGTAC +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRHRVRV*YTVAEY
Trigger: GTACTCGGCGACAGTGTACCAGACGCGCACCCTATG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGCAGGCATGGACAGCCTaGCAACAGCTACTCAATTGC +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPQAWTA*QQLLNC
Trigger: GCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCCTG...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCAGTGCCTGGTGGCCCTaGTTTCCCCTTGGAGACATC +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFSAWWP*FPLGDI
Trigger: GATGTCTCCAAGGGGAAACCAGGGCCACCAGGCACT...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCAGGAAACAGAGCCCGTaGGAGTGGGCTCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFRKQSP*EWALKV
Trigger: CACCTTCAGAGCCCACTCCCACGGGCTCTGTTTCCT...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGATGCACGGCCCCTCGCTaGGGACAGCCGTCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGCTAPR*GQPSKA
Trigger: TGCCTTGGACGGCTGTCCTCAGCGAGGGGCCGTGCA...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398061.5
CDS-3UTR TCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGGTAGAGCTGCTTGCTaGCCGGCCAGAGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGGRAAC*PARAPA
Trigger: CGCTGGCGCTCTGGCCGGTCAGCAAGCAGCTCTACC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGGAAACATGCCCTTCTaGTTATATATCTCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAGNMPF*LYISWS
Trigger: GCTCCAGGAGATATATAATCAGAAGGGCATGTTTCC...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGATGGGAGCCAAGGTGCTaGGCCGAGCGATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGWEPRC*AERCSR
Trigger: CCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCA...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAAACTCTGCATTTCACTaGGTTCTCAGGGGCCCATCC +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKNSAFH*VLRGPS
Trigger: GGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTT...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAAGATGAGGGCGCTGTaGCTTAGAACAAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPKMRAL*LRTSKS
Trigger: CGACTTGCTTGTTCTAAGTCACAGCGCCCTCATCTT...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGCGAGGAGCCGTGCTCTaGGCAGGTGTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGRGAVL*AGVHRW
Trigger: CCACCTGTGCACACCTGCTCAGAGCACGGCTCCTCG...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGCGAGGAGCCGTGCTCTaGGCAGGTGTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSERGAVL*AGVHRW
Trigger: CCACCTGTGCACACCTGCTCAGAGCACGGCTCCTCG...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCTTAAAGACTTGGTGTTaGGAAGCACAAGCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGLKTWC*EAQAKL
Trigger: CAGCTTAGCTTGTGCTTCTCAACACCAAGTCTTTAA...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTTTAAAGACTTGGTGTTaGGAAGCACAAGCTAAGCTG +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDALKTWC*EAQAKL
Trigger: CAGCTTAGCTTGTGCTTCTCAACACCAAGTCTTTAA...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTTGCTGGCGATCTTGCTaGTTAAAAGGCCAGTTGAAT +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCACWRSC*LKGQLN
Trigger: ATTCAACTGGCCTTTTAATCAGCAAGATCGCCAGCA...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGAGCCACCCAGCTCTCTaGGCTCCAGAATTTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRSHPAL*APEFVS
Trigger: GGAGACAAATTCTGGAGCTCAGAGAGCTGGGTGGCT...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR GCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGGCAGGCCCATGGCGCTaGTCAGGAGCGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRAGPWR*SGAGAR
Trigger: CCGTGCACCCGCTCCTGAGCAGCGCCATGGGCCTGC...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGCCTCCCACTTCCGCTTaGAGAACACAATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKPPTSA*RTQSPE
Trigger: TTCTGGAGATTGTGTTCTGCAAGCGGAAGTGGGAGG...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGATGAAGCCACTGAGCTaGTTCCTTTTCATCCAGCGG +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKMKPLS*FLFIQR
Trigger: CCGCTGGATGAAAAGGAAGCAGCTCAGTGGCTTCAT...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CTGAAGGTGGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTCGGGCAGGCTTAAACTaGTCCCCTGGAAACATGCCC +
Preference number: 4 (lower is better)
Translates to: LKVGGPMGQECLVALVSPRAGLN*SPGNMP
Trigger: GGGCATGTTTCCAGGGGAGCAGTTTAAGCCTGCCCG...AGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR GCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCGGGCCAGGGGCTCGCTaGAAGGCCAAGGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFGPGAR*KAKGAS
Trigger: GCTGGCTCCCTTGGCCTTGCAGCGAGCCCCTGGCCC...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGATGCCCACGGCACAGCTaGCCGAGTGGGCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRCPRHS*PSGRVE
Trigger: CTCCACCCGCCCACTCGGGCAGCTGTGCCGTGGGCA...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGGGAGAATCTCTGGGGTaGTCAGCCAGGGGAGCGCAT +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEGESLG*SARGAH
Trigger: ATGCGCTCCCCTGGCTGAGCACCCCAGAGATTCTCC...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGTCCAGGTCACATATGTaGATGGTCGTACCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPSRSHM*MVVPFS
Trigger: GCTGAAGGGTACGACCATGCACATATGTGACCTGGA...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGATGAGGTGTGACCCCTaGGCCTGGGCCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEMRCDP*AWASVS
Trigger: GGAGACGGAGGCCCAGGCGCAGGGGTCACACCTCAT...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAAAGCCAGTGGCTGTCATaGGCACTCAGGTCAATGGTT +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKSQWLS*ALRSMV
Trigger: AACCATTGACCTGAGTGCGCATGACAGCCACTGGCT...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGTCGATCTCGAAGTTGTaGTTGAGGATGATGACTGCG +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGSISKL*LRMMTA
Trigger: CGCAGTCATCATCCTCAACCACAACTTCGAGATCGA...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCTTAAACTGCTCCCCTaGAAACATGCCCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCALKLLP*KHALLI
Trigger: AATCAGAAGGGCATGTTTCCAGGGGAGCAGTTTAAG...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCTTGGTTTCCGTAGCTaGAGCCTTTTTCTATCTCAG +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCALGFRS*SLFLSQ
Trigger: CTGAGATAGAAAAAGGCTCCAGCTACGGAAACCAAG...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGACGCGCGTGGAGATGCTaGGACCCTGCGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGRAWRC*DPALWE
Trigger: CTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCG...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCTCCCACGGGCGCGCGTaGAGATGCTGGGACCCTGCG +
Preference number: 4 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSSHGRA*RCWDPA
Trigger: CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGA...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCCAAAGGCTCCCTCTTaGAAGCGGAGTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRPKAPS*KRSSGE
Trigger: CTCTCCAGAACTCCGCTTCCAAGAGGGAGCCTTTGG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGGGAGCTTTAGGTGCATaGAGAACTCTGCATTTCACT +
Preference number: 4 (lower is better)
Translates to: SPAGPTSHGRAWRCWDPAGALGA*RTLHFT
Trigger: AGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCC...CGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCTGGGCGCTCAGGGGTaGCCGGGCCACAGTGACACC +
Preference number: 4 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFLGAQG*PGHSDT
Trigger: GGTGTCACTGTGGCCCGGCCACCCCTGAGCGCCCAG...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGCAGGTGTGCACAGGTaGCGTCCCGCACACGCCCTG +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGAGVHR*RPAHAL
Trigger: CAGGGCGTGTGCGGGACGCCACCTGTGCACACCTGC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCGGATCTAAACACACATaGAGACGGATGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTGSKHT*RRMSSV
Trigger: CACGCTGCTCATCCGTCTCCATGTGTGTTTAGATCC...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGGTCACATATGTGCATaGTCGTACCCTTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCGHICA*SYPSAF
Trigger: AAAAGCTGAAGGGTACGACCATGCACATATGTGACC...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCGCATCCTTGGGAAGATaGGCAGGAGACCCCATGACA +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFASLGR*AGDPMT
Trigger: TGTCATGGGGTCTCCTGCCCATCTTCCCAAGGATGC...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCAGTGAAACACACAGCTaGGTCCAACCACGGCTTTTC +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTSETHS*VQPRLF
Trigger: GAAAAGCCGTGGTTGGACCCAGCTGTGTGTTTCACT...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGACATCTATGCAGACTaGAAACGAAGAAACAGAAGG +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGDIYAD*KRRNRR
Trigger: CCTTCTGTTTCTTCGTTTCCAGTCTGCATAGATGTC...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGTGGGACAGGAGTGCCTaGTGGCCCTGGTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEWDRSA*WPWFPL
Trigger: AAGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCA...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR TCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGGTTCTTGTTTCCTCTaGAGTTCAGGGTTACATCAT +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCGSCFL*SSGLHH
Trigger: ATGATGTAACCCTGAACTTCAGAGGAAACAAGAACC...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGCAGGACAGGGCAGAGTaGGGGCTCCGACTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGQDRAE*GLRLRG
Trigger: TCCTCGAAGTCGGAGCCCTCACTCTGCCCTGTCCTG...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCAAATGCAGGTGGGCTaGTGGTACCGCAACCAAGTT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRQMQVG*WYRNQV
Trigger: AACTTGGTTGCGGTACCATCAGCCCACCTGCATTTG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAACCGCAACGAACAGCGTaGGGAAAGATTCTCATGCCA +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQPQRTA*GKILMP
Trigger: TGGCATGAGAATCTTTCCTCACGCTGTTCGTTGCGG...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTTCCAGCAGATCAGTGTaGCATCTTTTACGCAAAAAT +
Preference number: 4 (lower is better)
Translates to: RGRPLRPDPPPTGARGDASSRSV*HLLRKN
Trigger: ATTTTTGCGTAAAAGATGTCACACTGATCTGCTGGA...AGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGAAGCCGACCAGCAGGTaGAGCACGAACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEKPTSR*STNWVF
Trigger: GAAGACCCAGTTCGTGCTGCACCTGCTGGTCGGCTT...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGTCCATGCTAACGCGGTaGTTGGTCTCCGTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGESMLTR*LVSVKR
Trigger: GCGCTTCACGGAGACCAAGCACCGCGTTAGCATGGA...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCCCCTGGAAACATaGCCTTCTGATTATATATCT +
Preference number: 4 (lower is better)
Translates to: LSGRTHLPRARVEMLGPCAPLET*PSDYIS
Trigger: AGATATATAATCAGAAGGGCATGTTTCCAGGGGAGC...GCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCAAAGGAGCTTTAGGTaGATGGAGAACTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCAQRSFR*MENSAF
Trigger: AAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTG...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGTGCTCTGAGCAGGTGTaGACAGGTGGCGTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSECSEQV*TGGVPH
Trigger: GTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCA...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAATCCAGGTCACATATGTaGATGGTCGTACCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKSRSHM*MVVPFS
Trigger: GCTGAAGGGTACGACCATGCACATATGTGACCTGGA...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGTCCAGGTCACATATGTaGATGGTCGTACCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGSRSHM*MVVPFS
Trigger: GCTGAAGGGTACGACCATGCACATATGTGACCTGGA...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGCAGGGAGGAGGACTCTaGCCTCTTCCCCGCATGACC +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGQGGGL*PLPRMT
Trigger: GGTCATGCGGGGAAGAGGGCAGAGTCCTCCTCCCTG...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR CCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGAGGCCAGCAGGCCCATaGCGCTGCTCAGGAGCGGGT +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRRPAGP*RCSGAG
Trigger: ACCCGCTCCTGAGCAGCGCCATGGGCCTGCTGGCCT...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCCTCTATTCAGAACGCTaGTTTCAAGATATCAGAGAT +
Preference number: 4 (lower is better)
Translates to: ERRRPREASPAGPTSHGRLYSER*FQDIRD
Trigger: ATCTCTGATATCTTGAAACCAGCGTTCTGAATAGAG...GCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGGCAGGTGTGCACAGGTaGCGTCCCGCACACGCCCTG +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRAGVHR*RPAHAL
Trigger: CAGGGCGTGTGCGGGACGCCACCTGTGCACACCTGC...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCGACCACGGCCCAGGCTaGGAGCTTGACCGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSDHGPG*ELDRPD
Trigger: GTCTGGCCGGTCAAGCTCCCAGCCTGGGCCGTGGTC...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTTAACAAGCAGCCAGTaGCGAGTGTTCATGATAAAA +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRLTSSQ*RVFMIK
Trigger: TTTTATCATGAACACTCGCCACTGGCTGCTTGTTAA...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGCAAAAAGTTAAGAAATaGAGACGAACTCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: AGGLSGRTHLPRARVEMLQKVKK*RRTPGD
Trigger: GTCACCTGGAGTTCGTCTCCATTTCTTAACTTTTTG...CAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAGCCCTGGTTTCCCCTTaGAGACATCTATGCAGACTG +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQALVSP*RHLCRL
Trigger: CAGTCTGCATAGATGTCTCCAAGGGGAAACCAGGGC...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAACTCAGGGCTTCCGGCTaGACAAGCCTGAAAGTGAAA +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQLRASG*TSLKVK
Trigger: TTTCACTTTCAGGCTTGTCCAGCCGGAAGCCCTGAG...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327505.6
CDS-3UTR CCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGAGCCAGCAGCATGGCTaGGAGCAACCACAGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGSQQHG*EQPQEG
Trigger: GCCCTCCTGTGGTTGCTCCCAGCCATGCTGCTGGCT...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR TCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCAAGATGAGGGCGCTGTaGCTTAGAACAAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFKMRAL*LRTSKS
Trigger: CGACTTGCTTGTTCTAAGTCACAGCGCCCTCATCTT...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGAAGATGAGGGCGCTGTaGCTTAGAACAAGCAAGTCG +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRKMRAL*LRTSKS
Trigger: CGACTTGCTTGTTCTAAGTCACAGCGCCCTCATCTT...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAGCACAAGCTAAGCTGTaGGATGGGAAGGAAACCAGA +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQAQAKL*DGKETR
Trigger: TCTGGTTTCCTTCCCATCTCACAGCTTAGCTTGTGC...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCTACAATGGGTCCCTTTaGAACTGGCCAACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFYNGSL*NWPTVS
Trigger: GCTGACTGTTGGCCAGTTTCAAAGGGACCCATTGTA...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR GCA 90 bp CCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGCTAATTGTCTTTTCCTaGACTCTGTGTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PAGPTSHGRAWRCWDPALLIVFS*TLCVGF
Trigger: AAAACCAACACACAGAGTGCAGGAAAAGACAATTAG...CAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGGTGCATGGAGAACTCTaGATTTCACTGAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPVHGEL*ISLSSQ
Trigger: CTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCAC...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACCGAGCGCTGCCCTCTaGTCTGCCTGGACTCTCAGA +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGPSAAL*SAWTLR
Trigger: TCTGAGAGTCCAGGCAGAGCAGAGGGCAGCGCTCGG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAAAGTCGAAAGCCAAATaGAGGTGGGCTGATGGTACC +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQKSKAK*RWADGT
Trigger: GGTACCATCAGCCCACCTGCATTTGGCTTTCGACTT...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCAGCGCCTCCATCATaGAGAACGCTGCCGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGAAPPS*RTLPSP
Trigger: AGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGCAAAACAACAGTGTCTaGAAGCGTGTCTCGCATGGT +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGQNNSV*KRVSHG
Trigger: ACCATGCGAGACACGCTTGCAGACACTGTTGTTTTG...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCCGCCATGGCTCAGTaGAGAATTTATACATTATAT +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRSAMAQ*RIYTLY
Trigger: ATATAATGTATAAATTCTGCACTGAGCCATGGCGGA...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACACAGGCCAGAGGCCTaGAGCGGGAGTCTACGCATG +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGHRPEA*SGSLRM
Trigger: CATGCGTAGACTCCCGCTGCAGGCCTCTGGCCTGTG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGTTTCCCCTGTGTTTTTaGCAGGTGACCGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRFPLCF*QVTALL
Trigger: AAGGAGAGCGGTCACCTGGCAAAAACACAGGGGAAA...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGGCCAGCGTGCACAGCTaGACGAAGTTGATGACCAGA +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEASVHS*TKLMTR
Trigger: TCTGGTCATCAACTTCGTCCAGCTGTGCACGCTGGC...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCGAAGCGCTCACACATaGTCCACCCACAGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGERSAHT*STHRGS
Trigger: ACTTCCTCTGTGGGTGGACCATGTGTGAGCGCTTCG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp ATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGCTTGGTTTCCGTAGCTaGAGCCTTTTTCTATCTCAG +
Preference number: 4 (lower is better)
Translates to: ITTGALHGAPTGSQGAEPLGFRS*SLFLSQ
Trigger: CTGAGATAGAAAAAGGCTCCAGCTACGGAAACCAAG...CGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGCCCCAGCACCCAGTGTaGAGGGACCAGGATCTGACA +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEPQHPV*RDQDLT
Trigger: TGTCAGATCCTGGTCCCTCCACACTGGGTGCTGGGG...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCCTGTTCTCCCTCCTTaGCTCCTGATCTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEPVLPP*LLICGM
Trigger: CATCCCACAGATCAGGAGCCAAGGAGGGAGAACAGG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCCTCTATTCAGAACGCTaGTTTCAAGATATCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LRPDPPPTGARGDAGTLRLYSER*FQDIRD
Trigger: ATCTCTGATATCTTGAAACCAGCGTTCTGAATAGAG...GCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCGCAGGTGTGCACAGGTaGCGTCCCGCACACGCCCTG +
Preference number: 4 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGAGVHR*RPAHAL
Trigger: CAGGGCGTGTGCGGGACGCCACCTGTGCACACCTGC...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCCTCGCATGGTGTCGTTaGTCTCATCTGGTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFLAWCR*SHLVSL
Trigger: CAACGAAACCAGATGAGACCAACGACACCATGCGAG...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGGTGCAGGAGAATCTCTaGGGTGCTCAGCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSEVQENL*GAQPGE
Trigger: CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCAC...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGGTGCAGGAGAATCTCTaGGGTGCTCAGCCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGVQENL*GAQPGE
Trigger: CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCAC...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAAGCGGAGTTCTGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCGGTCACATATGTGCATaGTCGTACCCTTCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: WKRSSGETASAGGLSGRTGHICA*SYPSAF
Trigger: AAAAGCTGAAGGGTACGACCATGCACATATGTGACC...GGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGAGAGACGGCGTCCGCGGGAGGCCTCTCCGGCCGGACCCACCTCCCACGGGCTGGAGAGATTATACTTaGCTTGTTGTAGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: WRDGVRGRPLRPDPPPTGWRDYT*LVVEVS
Trigger: AGACACTTCTACAACAAGCCAAGTATAATCTCTCCA...GCCCGTGGGAGGTGGGTCCGGCCGGAGAGGCCTCCCGCGGACGCCGTCTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CTCCACGGGGCCCCCACTGGGAGCCAAGGTGCTGAGCCGAGCGATGCTCCCGGGGCCAACAGTCAGCGATaGCAGATTTTCAATCATAGA +
Preference number: 4 (lower is better)
Translates to: LHGAPTGSQGAEPSDAPGANSQR*QIFNHR
Trigger: TCTATGATTGAAAATCTGCCATCGCTGACTGTTGGC...CCCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCAGTGGGGGCCCCGTGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGCAGAGCCCGTGGGAGTaGGCTCTGAAGGTGGGTGGC +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRQSPWE*ALKVGG
Trigger: GCCACCCACCTTCAGAGCCCACTCCCACGGGCTCTG...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CAA 72 bp GCCAAATGCAGGTGGGCTGATGGTACCGCAACCAAGTaGAGCGTTCTACCACTGCCATTGCCCCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: AKCRWADGTATK*SVLPLPLPQGP
Trigger: GGGCCCCTGGGGCAATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTACCATCAGCCCACCTGCATTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGAGGCGAGGCGGCAGTTaGGGCGGCGGTAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVRRGGS*GGGRAA
Trigger: AGCAGCTCTACCGCCGCCTCAACTGCCGCCTCGCCT...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGAACCACGTCCAGCCGATaGGGGGCACGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRTTSSR*GARRAA
Trigger: AGCTGCTCTACGTGCCCCTCATCGGCTGGACGTGGT...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCAGGTGCTTGGTCTCCGTaGAGCGCGTCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSGAWSP*SASPRS
Trigger: ACTGCGAGGGGACGCGCTTCACGGAGACCAAGCACC...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGGGGTGCAGAAGAGGTaGGGGGCCAGGTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGGVQKR*GARLSS
Trigger: GGAACTTAACCTGGCCCCTCACCTCTTCTGCACCCC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGGGAGCCAAGGTGCTaGGCCGAGCGATGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVWEPRC*AERCSR
Trigger: CCGGGAGCATCGCTCGGCTCAGCACCTTGGCTCCCA...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGAACTCTGCATTTCACTaGGTTCTCAGGGGCCCATCC +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGENSAFH*VLRGPS
Trigger: GGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTT...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGTGGGAGGCTGAAGACTTCACCTGACAGGCCTTCTGAATTCTTTACTCTTGGCGTGGCCGGGCCACAGTaGCACCGGCCAGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: CGRLKTSPDRPSEFFTLGVAGPQ*HRPGWG
Trigger: CCCCCATCCTGGCCGGTGTCACTGTGGCCCGGCCAC...GCCAAGAGTAAAGAATTCAGAAGGCCTGTCAGGTGAAGTCTTCAGCCTCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCACCAAGGGAGCCAGCATaGCCGGCCGAGCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSPREPA*PAERCP
Trigger: AGGGCAGCGCTCGGCCGGTCATGCTGGCTCCCTTGG...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGAGCAGCGTGCGGCATaGGGAAGGTGCAGGAGAATC +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGEQRAA*GRCRRI
Trigger: GATTCTCCTGCACCTTCCTCATGCCGCACGCTGCTC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGGGAAGGAAACCAGATaGGGTGTGACCCCTGCGCCT +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGGKETR*GVTPAP
Trigger: AGGCGCAGGGGTCACACCTCATCTGGTTTCCTTCCC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCTCTGGTCCATCACCTaGACCTCTGGGCTAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGELWSIT*TSGLES
Trigger: ACTTTCTAGCCCAGAGGTTCAGGTGATGGACCAGAG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398058.5
CDS-3UTR TCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCGCCCTCTTCCCCGCATaGCCCAGAGTCTCTGCAAGC +
Preference number: 4 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFALFPA*PRVSAS
Trigger: GCTTGCAGAGACTCTGGGTCATGCGGGGAAGAGGGC...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR GCA 90 bp CTGAAGGTGGGTGGCCCCATGGGACAGGAGTGCCTGGTGGCCCTGGTTTCCCCTATGAAGCCACTGAGCTaGTTCCTTTTCATCCAGCGG +
Preference number: 4 (lower is better)
Translates to: LKVGGPMGQECLVALVSPMKPLS*FLFIQR
Trigger: CCGCTGGATGAAAAGGAAGCAGCTCAGTGGCTTCAT...AGGGGAAACCAGGGCCACCAGGCACTCCTGTCCCATGGGGCCACCCACCTTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR GCA 90 bp TCCGGCCGGACCCACCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTCTAATTGTCTTTTCCTaGACTCTGTGTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SGRTHLPRARVEMLGPCALIVFS*TLCVGF
Trigger: AAAACCAACACACAGAGTGCAGGAAAAGACAATTAG...AGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGGTGGGTCCGGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCTGCTCTGAGCAGGTGTaGACAGGTGGCGTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSCSEQV*TGGVPH
Trigger: GTGCGGGACGCCACCTGTGCACACCTGCTCAGAGCA...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGCCCTGCGAGGAGCCGTaGTCTGAGCAGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRPCEEP*SEQVCT
Trigger: TGTGCACACCTGCTCAGAGCACGGCTCCTCGCAGGG...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCCTGCGAGGAGCCGTaGTCTGAGCAGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFPCEEP*SEQVCT
Trigger: TGTGCACACCTGCTCAGAGCACGGCTCCTCGCAGGG...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCCTGCCCCTTCACCCCTaGGAGGAGCCGTGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGLPLHP*EEPCSE
Trigger: CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAG...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCAAAACAACAGTGTCTaGAAGCGTGTCTCGCATGGT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRQNNSV*KRVSHG
Trigger: ACCATGCGAGACACGCTTGCAGACACTGTTGTTTTG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGGCCAGGCCTAGAATGTaGCTCACCCCGACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRARPRM*LTPTVA
Trigger: GGCCACTGTCGGGGTGAGGCACATTCTAGGCCTGGC...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp TCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCTCTGAGCGCTCTACCGTGGCCTaGTCCGTGAACAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: SSGFVGLPLHPCEEPCSERSTVA*SVNSVH
Trigger: GTGTACACTGTTCACGGACCAGGCCACGGTAGAGCG...CTCAGAGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCCGCGCGTGGAGATGCTaGGACCCTGCGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GMDSLATATQLHVSETHSRAWRC*DPALWE
Trigger: CTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCG...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGTGTGACCCCTGCGCCTaGGCCTCCGTCTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRCDPCA*ASVSTL
Trigger: TAGAGTGGAGACGGAGGCCCAGGCGCAGGGGTCACA...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCTCCAGTGTGGCGCCTaGCTCTGGGTGGGTAACAGG +
Preference number: 4 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFLQCGA*LWVGNR
Trigger: CCTGTTACCCACCCAGAGCCAGGCGCCACACTGGAG...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GACTGTGGGCTACAGAGTTGCTTCAGCCTGAGCACTCAGCCTGAATTTGGACATCACCTGGGCCTAAGCTaGGAGGCCAGCGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: DCGLQSCFSLSTQPEFGHHLGLS*EASGVP
Trigger: GGGGACGCCGCTGGCCTCCCAGCTTAGGCCCAGGTG...ATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCTCCCACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGGAGAAAGGGGTTCCTTaGTTTTCTCCACAGATGAAT +
Preference number: 4 (lower is better)
Translates to: PPTGARGDAGTLRCGRLKEKGVP*FSPQMN
Trigger: ATTCATCTGTGGAGAAAACCAAGGAACCCCTTTCTC...CTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
3UTR CAA 72 bp TGTCTCGCATGGTGTCGTTGGTCTCATCTGGTTTCGTaGGTCTGCCCCTTCACCCCTGCGAGGAGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: CLAWCRWSHLVS*VCPFTPARSRA
Trigger: AGCACGGCTCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACCATGCGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGCAGTTGGCTCCAGAGTaGGTAGGCGAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRQLAPE*VGEAAV
Trigger: AACTGCCGCCTCGCCTACTCACTCTGGAGCCAACTG...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCAGTTGGCTCCAGAGTaGGTAGGCGAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFQLAPE*VGEAAV
Trigger: AACTGCCGCCTCGCCTACTCACTCTGGAGCCAACTG...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAACCACTCCAGCAGCATaGCCAGTTGGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGTTPAA*PVGSRV
Trigger: CACTCTGGAGCCAACTGGTCATGCTGCTGGAGTGGT...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGGGTGCTTGGTCTCCGTaGAGCGCGTCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVGAWSP*SASPRS
Trigger: ACTGCGAGGGGACGCGCTTCACGGAGACCAAGCACC...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCACAGGGCTCTAGAAAGTaGGGTGGGGCGTTCGCCCTC +
Preference number: 4 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSQGSRK*GGAFAL
Trigger: GAGGGCGAACGCCCCACCTCACTTTCTAGAGCCCTG...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAAACCTTGCTAAAAAGATaGGGGCGCTGTGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQTLLKR*GRCDLE
Trigger: TTCTAAGTCACAGCGCCCTCATCTTTTTAGCAAGGT...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGACCTTGCTAAAAAGATaGGGGCGCTGTGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRTLLKR*GRCDLE
Trigger: TTCTAAGTCACAGCGCCCTCATCTTTTTAGCAAGGT...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGTCAATTGCACGTGAGTaGAACACACAGCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGESIARE*NTQLGP
Trigger: TGGACCCAGCTGTGTGTTTCACTCACGTGCAATTGA...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGATTCGGGCTGGCCGTTTaGACCCTGAGCCTAGGTGCA +
Preference number: 4 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRFGLAV*TLSLGA
Trigger: TGCACCTAGGCTCAGGGTTCAAACGGCCAGCCCGAA...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGCAACTCAATGATCTTTaGAAAGCGTACGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGQLNDL*KAYAAV
Trigger: AACAGCAGCGTACGCTTTTCAAAGATCATTGAGTTG...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAGACGTGCTCCCTCGCTaGAGGCCACCTGCCCGGATC +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSDVLPR*RPPARI
Trigger: GATCCGGGCAGGTGGCCTTCAGCGAGGGAGCACGTC...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGATCCATGCTAACGCGGTaGTTGGTCTCCGTGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGSMLTR*LVSVKR
Trigger: GCGCTTCACGGAGACCAAGCACCGCGTTAGCATGGA...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCGTGCATGGAGAACTCTaGATTTCACTGAGTTCTCAG +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFVHGEL*ISLSSQ
Trigger: CTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCAC...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTGAGTTCTCAGGGGGGGAGCGCATGCCCTaGCCACGGCACAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: DKGALGAWRTLHFTEFSGGERMP*PRHSCP
Trigger: CGGGCAGCTGTGCCGTGGGCAGGGCATGCGCTCCCC...CCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGATGAGGTGTGACCCCTaGGCCTGGGCCTCCGTCTCC +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVMRCDP*AWASVS
Trigger: GGAGACGGAGGCCCAGGCGCAGGGGTCACACCTCAT...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCGCCAGGCCTAGAATGTaGCTCACCCCGACAGTGGCC +
Preference number: 4 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGARPRM*LTPTVA
Trigger: GGCCACTGTCGGGGTGAGGCACATTCTAGGCCTGGC...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGAGCTACAGGCCAGCAATaGCCTTCCTGTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRATGQQ*PSCPRP
Trigger: AGGCCGAGGACAGGAAGGGCATTGCTGGCCTGTAGC...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCACCTCACATAGGGTaGGCGTCTGGTACACTGTCG +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGAPHIG*ASGTLS
Trigger: CGACAGTGTACCAGACGCGCACCCTATGTGAGGTGC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GCCTTGAAAAGTGCCATCGGCAGGATGGCCTCCAAGGAAACAGAGCCCGTGGGAAGGTGCAGCACGAACTaGGTCTTCAGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: ALKSAIGRMASKETEPVGRCSTN*VFRKAS
Trigger: GCTGGCCTTCCTGAAGACCCAGTTCGTGCTGCACCT...TCCCACGGGCTCTGTTTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAAGGTGCAGCACGAACTaGGTCTTCAGGAAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGRCSTN*VFRKAS
Trigger: GCTGGCCTTCCTGAAGACCCAGTTCGTGCTGCACCT...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGGTCCGCGGCAGCAGGTaGTACTTGAGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRVRGSR*YLRTGS
Trigger: GCTTCCTGTCCTCAAGTACCACCTGCTGCCGCGGAC...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGCTCATCTGGTTTCGTTaGTCTGCCCCTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGLIWFR*SAPSPL
Trigger: CAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAG...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGGCCAGCACGGACTGTaGGCTACAGAGTTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGGQHGL*ATELLQ
Trigger: CTGAAGCAACTCTGTAGCCCACAGTCCGTGCTGGCC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCAGACCCCATGACACCTaGCACCTGGGCCTAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSRPHDT*HLGLSW
Trigger: CCAGCTTAGGCCCAGGTGCCAGGTGTCATGGGGTCT...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCAGTGAGCAGCAGGAGGTaGCAGAAGTGTGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSVSSRR*QKCGAL
Trigger: CAGGGCCCCACACTTCTGCCACCTCCTGCTGCTCAC...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR TCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCCCGTGGCCTGGTCCGTaGACAGTGTACACTCCGTGC +
Preference number: 4 (lower is better)
Translates to: GMDSLATATQLHVSETHSPWPGP*TVYTPC
Trigger: GCACGGAGTGTACACTGTTCACGGACCAGGCCACGG...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp AAGAAGCCAGTGGCTGTCATGCGCACTCAGGTCAATGGTTTGTGTGGGTTCTCCACCACGTCCAGCCGATaGGGGGCACGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: KKPVAVMRTQVNGLCGFSTTSSR*GARRAA
Trigger: AGCTGCTCTACGTGCCCCTCATCGGCTGGACGTGGT...GGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR TCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGCAAATGCAGGTGGGCTaGTGGTACCGCAACCAAGTT +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGQMQVG*WYRNQV
Trigger: AACTTGGTTGCGGTACCATCAGCCCACCTGCATTTG...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGAAACCAGATGAGGTGTaGCCCCTGCGCCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVKPDEV*PLRLGL
Trigger: GAGGCCCAGGCGCAGGGGTCACACCTCATCTGGTTT...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCATCCGTGGCTGCTGAGTaGCCCCCACGGCATGGACGT +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSSVAAE*PPRHGR
Trigger: ACGTCCATGCCGTGGGGGTCACTCAGCAGCCACGGA...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR GCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAACAGTGTACACTCCGTaGAGGACCACCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGTVYTP*RTTTPA
Trigger: TGCTGGAGTGGTGGTCCTGCACGGAGTGTACACTGT...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CAGTGGCGAGTGTTCATGATAAAACTGAATTCATGTGTCCACCCCACTCCAGCAGGGCGCGCGTGGAGATaGTGGGACCCTGCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QWRVFMIKLNSCVHPTPAGRAWR*WDPALW
Trigger: CCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCC...TGCTGGAGTGGGGTGGACACATGAATTCAGTTTTATCATGAACACTCGCCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGCAAAGGAGCTTTAGGTaGATGGAGAACTCTGCATTT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRQRSFR*MENSAF
Trigger: AAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTG...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCACTGGTTTCGTTGGTCTaGCCCTTCACCCCTGCGAGG +
Preference number: 4 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSLVSLV*PFTPAR
Trigger: CCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAG...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp GACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTGAGTTCTCAGGGTGCCCACGGCACAGCTaGCCGAGTGGGCGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: DKGALGAWRTLHFTEFSGCPRHS*PSGRVE
Trigger: CTCCACCCGCCCACTCGGGCAGCTGTGCCGTGGGCA...CCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGTGGGAGGCTGAAGACTTCACCTGACAGGCCTTCTGAATTCTTTACTCTTGGCACGGAGCCGGATGTCTaGATCCCCCAGGTCGGCCCC +
Preference number: 4 (lower is better)
Translates to: CGRLKTSPDRPSEFFTLGTEPDV*IPQVGP
Trigger: GGGGCCGACCTGGGGGATGCAGACATCCGGCTCCGT...GCCAAGAGTAAAGAATTCAGAAGGCCTGTCAGGTGAAGTCTTCAGCCTCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGCCAGCGTGCACAGCTaGACGAAGTTGATGACCAGA +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGASVHS*TKLMTR
Trigger: TCTGGTCATCAACTTCGTCCAGCTGTGCACGCTGGC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGCGCTCTACCGTGGCCTaGTCCGTGAACAGTGTACAC +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRRSTVA*SVNSVH
Trigger: GTGTACACTGTTCACGGACCAGGCCACGGTAGAGCG...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGGAGAGGTGATCCGCTaGCAAAGACGCCCAAGACAA +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGGEVIR*QRRPRQ
Trigger: TTGTCTTGGGCGTCTTTGCCAGCGGATCACCTCTCC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCTTGGAAGCGGAGTTCTaGAGAGACGGCGTCCGCGGG +
Preference number: 4 (lower is better)
Translates to: GMDSLATATQLHVSETHSLEAEF*RDGVRG
Trigger: CCCGCGGACGCCGTCTCTCCAGAACTCCGCTTCCAA...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTGAGTTCTCAGGGCTGGGCGCTCAGGGGTaGCCGGGCCACAGTGACACC +
Preference number: 4 (lower is better)
Translates to: DKGALGAWRTLHFTEFSGLGAQG*PGHSDT
Trigger: GGTGTCACTGTGGCCCGGCCACCCCTGAGCGCCCAG...CCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCGCCCTCTGCTCTGCCTaGACTCTCAGAGACGTCCAG +
Preference number: 4 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGALCSA*TLRDVQ
Trigger: CTGGACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGC...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCAGCCATGCCGGGGGAGTaGACATGCTGTAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSAMPGE*TCCREK
Trigger: CTTCTCCCTACAGCATGTCCACTCCCCCGGCATGGC...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACTCATCTGGTTTCGTTaGTCTGCCCCTTCACCCCTG +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGLIWFR*SAPSPL
Trigger: CAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCGCCCGAGTGGGCGGGTaGAGGGATGAGATTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSARVGG*RDEISD
Trigger: ATCTGAAATCTCATCCCTCCACCCGCCCACTCGGGC...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCGCGCCTGGCTCTGGGTaGGTAACAGGAGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: GMDSLATATQLHVSETHSAPGSG*VTGATG
Trigger: GCCTGTAGCTCCTGTTACCCACCCAGAGCCAGGCGC...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGCTGGGCCCTCCCGCCTaGGAGCCTCCAGTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVLGPPA*EPPVWR
Trigger: GCGCCACACTGGAGGCTCCCAGGCGGGAGGGCCCAG...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCTACGCTGCTGTTGCCTaGGCCGGCGACACCAATGTC +
Preference number: 4 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGYAAVA*AGDTNV
Trigger: GACATTGGTGTCGCCGGCCCAGGCAACAGCAGCGTA...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAAGGTGGGTGGCCCCATaGGACAGGAGTGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSRWVAP*DRSAWW
Trigger: CCACCAGGCACTCCTGTCCCATGGGGCCACCCACCT...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGCCCACGCCTGCCCTCTaGCACATGTTTCTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVPTPAL*HMFLLA
Trigger: GGCCAGGAGAAACATGTGCCAGAGGGCAGGCGTGGG...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR CCA 90 bp GTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAGTCACAGAATCCCATGGCATCTaGCCCAGCCGGTCCAGCGCG +
Preference number: 4 (lower is better)
Translates to: VGFELTGYHRQGRVCSVTESHGI*PSRSSA
Trigger: CGCGCTGGACCGGCTGGGCCAGATGCCATGGGATTC...TGTGACTGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
3UTR CAA 72 bp CCCTCCCAGAAAGCAACTCGTAGGGAAGGGAGGGCCTaGAAAAGTGCCATCGGCAGGATGGCCTCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: PSQKATRREGRA*KSAIGRMASKE
Trigger: TTCCTTGGAGGCCATCCTGCCGATGGCACTTTTCAAGGCCCTCCCTTCCCTACGAGTTGCTTTCTGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR TCA 90 bp GTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAGTCACAACCACGTCCAGCCGATaGGGGGCACGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: VGFELTGYHRQGRVCSVTTTSSR*GARRAA
Trigger: AGCTGCTCTACGTGCCCCTCATCGGCTGGACGTGGT...TGTGACTGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGCAGGATCAGGAGAGGTaGTCCGCTGGCAAAGACGCC +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVQDQER*SAGKDA
Trigger: GGCGTCTTTGCCAGCGGATCACCTCTCCTGATCCTG...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGGGGGTGCAGAAGAGGTaGGGGGCCAGGTTAAGTTCC +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVGVQKR*GARLSS
Trigger: GGAACTTAACCTGGCCCCTCACCTCTTCTGCACCCC...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGACAAATGCAGGTGGGCTaGTGGTACCGCAACCAAGTT +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGQMQVG*WYRNQV
Trigger: AACTTGGTTGCGGTACCATCAGCCCACCTGCATTTG...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGACCTTGCTAAAAAGATaGGGGCGCTGTGACTTAGAA +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGETLLKR*GRCDLE
Trigger: TTCTAAGTCACAGCGCCCTCATCTTTTTAGCAAGGT...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGACACATGGAGACGGATaGGCAGCGTGCGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVTHGDG*AACGMR
Trigger: CCTCATGCCGCACGCTGCTCATCCGTCTCCATGTGT...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGCACGGGGGAAGACGATaGAGACAGCAATGGCATCCT +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRHGGRR*RQQWHP
Trigger: AGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTG...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGGCCGGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCACAGTGTACACTCCGTaGAGGACCACCACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WAGDTNVPGNFLGSLKVFTVYTP*RTTTPA
Trigger: TGCTGGAGTGGTGGTCCTGCACGGAGTGTACACTGT...GAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCCGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: GMDSLATATQLHVSETHSTFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCCATCATGCAGAACGCTaGCGTCCCCTCCAATCTCCC +
Preference number: 4 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGHHAER*RPLQSP
Trigger: GGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATG...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAGGGGAGCGCATGCCCTaGCCACGGCACAGCTGCCCG +
Preference number: 4 (lower is better)
Translates to: FLQININAQQYRNEQREEGERMP*PRHSCP
Trigger: CGGGCAGCTGTGCCGTGGGCAGGGCATGCGCTCCCC...TTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp GTTCGTGCCGGTGTGCTTATCACTACGGGCGCCCTCCACGGGGCCCCCACTGGGTCCGCCATGGCTCAGTaGAGAATTTATACATTATAT +
Preference number: 4 (lower is better)
Translates to: VRAGVLITTGALHGAPTGSAMAQ*RIYTLY
Trigger: ATATAATGTATAAATTCTGCACTGAGCCATGGCGGA...CCCAGTGGGGGCCCCGTGGAGGGCGCCCGTAGTGATAAGCACACCGGCACGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CGATGCTCCCGGGGGACGGGACCCGGCCGTCCACTCCCAGGAGGACAGCAGAAATCCGCCATGGCTCAGTaGAGAATTTATACATTATAT +
Preference number: 4 (lower is better)
Translates to: RCSRGTGPGRPLPGGQQKSAMAQ*RIYTLY
Trigger: ATATAATGTATAAATTCTGCACTGAGCCATGGCGGA...TTTCTGCTGTCCTCCTGGGAGTGGACGGCCGGGTCCCGTCCCCCGGGAGCATCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TCTCACACGGGGGAAGACGATGAAGACAGCAATGGCATCCTTGGGAAGATGGGCGCACCTCACATAGGGTaGGCGTCTGGTACACTGTCG +
Preference number: 4 (lower is better)
Translates to: SHTGEDDEDSNGILGKMGAPHIG*ASGTLS
Trigger: CGACAGTGTACCAGACGCGCACCCTATGTGAGGTGC...GCCCATCTTCCCAAGGATGCCATTGCTGTCTTCATCGTCTTCCCCCGTGTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp CCAAATCTGACCCCAACCGGTAGTCACAACAGGCATGGACAGCCTGGCAACAGCAACCCTGAGCCTAGGTaGAGTGCAAGGGCTAGAAGC +
Preference number: 4 (lower is better)
Translates to: PNLTPTGSHNRHGQPGNSNPEPR*SARARS
Trigger: GCTTCTAGCCCTTGCACTGCACCTAGGCTCAGGGTT...GCTGTTGCCAGGCTGTCCATGCCTGTTGTGACTACCGGTTGGGGTCAGATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGCTTAAACTGCTCCCCTaGAAACATGCCCTTCTGATT +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGELKLLP*KHALLI
Trigger: AATCAGAAGGGCATGTTTCCAGGGGAGCAGTTTAAG...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCTGGGACCCTGCGCTGTaGGAGGCTGAAGACTTCACC +
Preference number: 4 (lower is better)
Translates to: GMDSLATATQLHVSETHSWDPAL*EAEDFT
Trigger: GGTGAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCA...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTGAGTTCTCAGGGCGCGCGTGGAGATGCTaGGACCCTGCGCTGTGGGAG +
Preference number: 4 (lower is better)
Translates to: DKGALGAWRTLHFTEFSGRAWRC*DPALWE
Trigger: CTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCG...CCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGTCGTTGGTCTCATCTaGTTTCGTTGGTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGVVGLI*FRWSAP
Trigger: AGGGGCAGACCAACGAAACCAGATGAGACCAACGAC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACAAGCGTGTCTCGCATaGTGTCGTTGGTCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGQACLA*CRWSHL
Trigger: CAGATGAGACCAACGACACCATGCGAGACACGCTTG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCTTCCTGTCCTCGGCCTaGCTCAAGGACTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GMDSLATATQLHVSETHSFLSSA*LKDWVQ
Trigger: CTGCACCCAGTCCTTGAGCCAGGCCGAGGACAGGAA...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTGAGTTCTCAGGGTGGGAGCCTCCAGTGTaGCGCCTGGCTCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: DKGALGAWRTLHFTEFSGWEPPV*RLALGG
Trigger: CCCACCCAGAGCCAGGCGCCACACTGGAGGCTCCCA...CCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCTGCACCTGGGCCTAAGCTaGGAGGCCAGCGGCGTCCCC +
Preference number: 4 (lower is better)
Translates to: VPVILFPEQFVRMPPLSLHLGLS*EASGVP
Trigger: GGGGACGCCGCTGGCCTCCCAGCTTAGGCCCAGGTG...CAGGGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGAAAGCACATCGCGCCGTaGAGCACTAGTATTGCACGC +
Preference number: 4 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRKHIAP*STSIAR
Trigger: GCGTGCAATACTAGTGCTCCACGGCGCGATGTGCTT...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGTTAACAAGCAGCCAGTaGCGAGTGTTCATGATAAAA +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRLTSSQ*RVFMIK
Trigger: TTTTATCATGAACACTCGCCACTGGCTGCTTGTTAA...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAGTCACAGTGCCCCCGGAACTCTaGCGTCTTGGGTCCAGCTCT +
Preference number: 4 (lower is better)
Translates to: VGFELTGYHRQGRVCSVTVPPEL*RLGSSS
Trigger: AGAGCTGGACCCAAGACGCCAGAGTTCCGGGGGCAC...TGTGACTGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp GTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAGTCACACAGTTGGCTCCAGAGTaGGTAGGCGAGGCGGCAGTT +
Preference number: 4 (lower is better)
Translates to: VGFELTGYHRQGRVCSVTQLAPE*VGEAAV
Trigger: AACTGCCGCCTCGCCTACTCACTCTGGAGCCAACTG...TGTGACTGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp AAGAAGCCAGTGGCTGTCATGCGCACTCAGGTCAATGGTTTGTGTGGGTTCTCCACCACTCCAGCAGCATaGCCAGTTGGCTCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: KKPVAVMRTQVNGLCGFSTTPAA*PVGSRV
Trigger: CACTCTGGAGCCAACTGGTCATGCTGCTGGAGTGGT...GGAGAACCCACACAAACCATTGACCTGAGTGCGCATGACAGCCACTGGCTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR TCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCACAGGATCAGGAGAGGTaGTCCGCTGGCAAAGACGCC +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSQDQER*SAGKDA
Trigger: GGCGTCTTTGCCAGCGGATCACCTCTCCTGATCCTG...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGAACTCTGCATTTCACTaGGTTCTCAGGGGCCCATCC +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRNSAFH*VLRGPS
Trigger: GGATGGGCCCCTGAGAACTCAGTGAAATGCAGAGTT...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp AGTGTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCCAAGGGAGCCAGCATaGCCGGCCGAGCGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SVPVILFPEQFVRMPPLSPREPA*PAERCP
Trigger: AGGGCAGCGCTCGGCCGGTCATGCTGGCTCCCTTGG...GGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CGTCCACTCCCAGGAGGACAGCAGAAATTCATTACGAGACAGTTTCGGGGGCGGGTACCGCAACCAAGTTaGGCGTTCTACCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: RPLPGGQQKFITRQFRGRVPQPS*AFYHCH
Trigger: ATGGCAGTGGTAGAACGCTCAACTTGGTTGCGGTAC...CCGCCCCCGAAACTGTCTCGTAATGAATTTCTGCTGTCCTCCTGGGAGTGGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAACACATGGAGACGGATaGGCAGCGTGCGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSTHGDG*AACGMR
Trigger: CCTCATGCCGCACGCTGCTCATCCGTCTCCATGTGT...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp ATTGTCTTTTCCTGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCCCAGGCTGGGAGCTTaGCCGGCCAGACGCCCGTGG +
Preference number: 4 (lower is better)
Translates to: IVFSCTLCVGFELTGYHRPRLGA*PARRPW
Trigger: CCACGGGCGTCTGGCCGGTCAAGCTCCCAGCCTGGG...ACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCAGGAAAAGACAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp CGAGGCCCGAGGGGGCTTGCCTTTGGTTTGGGGACTAGCTCAGTAGAGAAAGGGGAGACGAACTCCAGGTaGCATTGTCATTACACAGCT +
Preference number: 4 (lower is better)
Translates to: RGPRGLAFGLGTSSVEKGETNSR*HCHYTA
Trigger: AGCTGTGTAATGACAATGTCACCTGGAGTTCGTCTC...CCCTTTCTCTACTGAGCTAGTCCCCAAACCAAAGGCAAGCCCCCTCGGGCCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGAGGAAGCAGGCCCATGGCGCTaGTCAGGAGCGGGTGCACGG +
Preference number: 4 (lower is better)
Translates to: FLQININAQQYRNEQREEAGPWR*SGAGAR
Trigger: CCGTGCACCCGCTCCTGAGCAGCGCCATGGGCCTGC...TTCCTCACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGAAGCCGACCAGCAGGTaGAGCACGAACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVKPTSR*STNWVF
Trigger: GAAGACCCAGTTCGTGCTGCACCTGCTGGTCGGCTT...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGACCTCCCACTTCCGCTTaGAGAACACAATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGPPTSA*RTQSPE
Trigger: TTCTGGAGATTGTGTTCTGCAAGCGGAAGTGGGAGG...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAGTCACACCGGAGGCACTTGACTaGGGTGGTGAAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: VGFELTGYHRQGRVCSVTPEALD*GGEALG
Trigger: ACCAAGGGCTTCACCACCGCAGTCAAGTGCCTCCGG...TGTGACTGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GCGTGCGGCATGAGGAAGGTGCAGGAGAATCTCTGGGGTGCTCAGCCAGGGGAGGCTCCCCTGGAAACATaGCCTTCTGATTATATATCT +
Preference number: 4 (lower is better)
Translates to: ACGMRKVQENLWGAQPGEAPLET*PSDYIS
Trigger: AGATATATAATCAGAAGGGCATGTTTCCAGGGGAGC...CTCCCCTGGCTGAGCACCCCAGAGATTCTCCTGCACCTTCCTCATGCCGCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAACTAATTGTCTTTTCCTaGACTCTGTGTGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQLIVFS*TLCVGF
Trigger: AAAACCAACACACAGAGTGCAGGAAAAGACAATTAG...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAACGTTCGTGCCGGTGTaGTTATCACTACGGGCGCCC +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSTFVPV*LSLRAP
Trigger: GGGCGCCCGTAGTGATAAGCACACCGGCACGAACGT...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCACGCTGCCCTCTGCTCTaGCTGGACTCTCAGAGACGT +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSRCPLL*LDSQRR
Trigger: ACGTCTCTGAGAGTCCAGGCAGAGCAGAGGGCAGCG...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAAAGTCGAAAGCCAAATaGAGGTGGGCTGATGGTACC +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGKSKAK*RWADGT
Trigger: GGTACCATCAGCCCACCTGCATTTGGCTTTCGACTT...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp GTAGGGAGAAGCATCCCTCGCTCGGCGTGGGCCAGGGGCTCGCTGCAAGGCCAATCCGCCATGGCTCAGTaGAGAATTTATACATTATAT +
Preference number: 4 (lower is better)
Translates to: VGRSIPRSAWARGSLQGQSAMAQ*RIYTLY
Trigger: ATATAATGTATAAATTCTGCACTGAGCCATGGCGGA...TTGGCCTTGCAGCGAGCCCCTGGCCCACGCCGAGCGAGGGATGCTTCTCCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp CCCGGCAGCGCCTCCATCATGCAGAACGCTGCCGTCCCCTCCAATCTCCCCAGGTCCGCCATGGCTCAGTaGAGAATTTATACATTATAT +
Preference number: 4 (lower is better)
Translates to: PGSASIMQNAAVPSNLPRSAMAQ*RIYTLY
Trigger: ATATAATGTATAAATTCTGCACTGAGCCATGGCGGA...CCTGGGGAGATTGGAGGGGACGGCAGCGTTCTGCATGATGGAGGCGCTGCCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR GCA 90 bp TGGTACACTGTCGCCGAGTACCAGACAACCAGTGTCTCACACGGGGGAAGACGATGTGGGCTACAGAGTTaGTTCAGCCTGAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: WYTVAEYQTTSVSHGGRRCGLQS*FSLSTQ
Trigger: CTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACA...TCGTCTTCCCCCGTGTGAGACACTGGTTGTCTGGTACTCGGCGACAGTGTACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TGTGGGAGGCTGAAGACTTCACCTGACAGGCCTTCTGAATTCTTTACTCTTGGCCACAGGCCAGAGGCCTaGAGCGGGAGTCTACGCATG +
Preference number: 4 (lower is better)
Translates to: CGRLKTSPDRPSEFFTLGHRPEA*SGSLRM
Trigger: CATGCGTAGACTCCCGCTGCAGGCCTCTGGCCTGTG...GCCAAGAGTAAAGAATTCAGAAGGCCTGTCAGGTGAAGTCTTCAGCCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp GGCATGGACAGCCTGGCAACAGCTACTCAATTGCACGTGAGTGAAACACACAGCTTGAAAAGCGTACGCTaGTGTTGCCTGGGCCGGCGA +
Preference number: 4 (lower is better)
Translates to: GMDSLATATQLHVSETHSLKSVR*CCLGRR
Trigger: TCGCCGGCCCAGGCAACAGCAGCGTACGCTTTTCAA...GCTGTGTGTTTCACTCACGTGCAATTGAGTAGCTGTTGCCAGGCTGTCCATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGCTCAGGGCTTCCGGCTaGACAAGCCTGCAGCCGCCG +
Preference number: 4 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVLRASG*TSLQPP
Trigger: CGGCGGCTGCAGGCTTGTCCAGCCGGAAGCCCTGAG...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp GTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAGTCACAGTCCGCGGCAGCAGGTaGTACTTGAGGACAGGAAGC +
Preference number: 4 (lower is better)
Translates to: VGFELTGYHRQGRVCSVTVRGSR*YLRTGS
Trigger: GCTTCCTGTCCTCAAGTACCACCTGCTGCCGCGGAC...TGTGACTGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp TGCACTCTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGGGGGAGACAGGAGAATaGTGGCCCAGGACAGGAAGT +
Preference number: 4 (lower is better)
Translates to: CTLCVGFELTGYHRQGRVGETGE*WPRTGS
Trigger: ACTTCCTGTCCTGGGCCACCATTCTCCTGTCTCCCC...CACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAGAGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR CCA 90 bp GACTGTGGGCTACAGAGTTGCTTCAGCCTGAGCACTCAGCCTGAATTTGGACATGCCATGCCGGGGGAGTaGACATGCTGTAGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DCGLQSCFSLSTQPEFGHAMPGE*TCCREK
Trigger: CTTCTCCCTACAGCATGTCCACTCCCCCGGCATGGC...ATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGACTCGCATGGTGTCGTTaGTCTCATCTGGTTTCGTTG +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGLAWCR*SHLVSL
Trigger: CAACGAAACCAGATGAGACCAACGACACCATGCGAG...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGAGGATCTAAACACACATaGAGACGGATGAGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGGSKHT*RRMSSV
Trigger: CACGCTGCTCATCCGTCTCCATGTGTGTTTAGATCC...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGATGCCCAGCTCCGCCATaGCTCAGTGCAGAATTTATA +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGCPAPP*LSAEFI
Trigger: TATAAATTCTGCACTGAGCCATGGCGGAGCTGGGCA...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR CCA 90 bp TGTGGGAGGCTGAAGACTTCACCTGACAGGCCTTCTGAATTCTTTACTCTTGGCGCCTGGCTCAAGGACTaGGTGCAGAGGGCATCAGCG +
Preference number: 4 (lower is better)
Translates to: CGRLKTSPDRPSEFFTLGAWLKD*VQRASA
Trigger: CGCTGATGCCCTCTGCACCCAGTCCTTGAGCCAGGC...GCCAAGAGTAAAGAATTCAGAAGGCCTGTCAGGTGAAGTCTTCAGCCTCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CACGGGCGCGCGTGGAGATGCTGGGACCCTGCGCTGTGGGAGGCTGAAGACTTCTGGAGAGATTATACTTaGCTTGTTGTAGAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: HGRAWRCWDPALWEAEDFWRDYT*LVVEVS
Trigger: AGACACTTCTACAACAAGCCAAGTATAATCTCTCCA...GAAGTCTTCAGCCTCCCACAGCGCAGGGTCCCAGCATCTCCACGCGCGCCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR CCA 90 bp CCAGCACCCAGTGTGGAGGGACCAGGATCTGACAGCCATGAGAGCGACAAAGGAGCACCCTGTATACAATaGGTCCCTTTGAAACTGGCC +
Preference number: 4 (lower is better)
Translates to: PAPSVEGPGSDSHESDKGAPCIQ*VPLKLA
Trigger: GGCCAGTTTCAAAGGGACCCATTGTATACAGGGTGC...TCCTTTGTCGCTCTCATGGCTGTCAGATCCTGGTCCCTCCACACTGGGTGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291572.13
CDS-3UTR CCA 90 bp GTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAGTCACAGGCACATGTTTCTCCTaGCCCGGGTGCCACACAGCA +
Preference number: 4 (lower is better)
Translates to: VGFELTGYHRQGRVCSVTGTCFS*PGCHTA
Trigger: TGCTGTGTGGCACCCGGGCCAGGAGAAACATGTGCC...TGTGACTGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398058.5
ENST00000546158.1
CDS-3UTR TCA 90 bp AGTGTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCAGGCGAGGCGGCAGTTaGGGCGGCGGTAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVPVILFPEQFVRMPPLSRRGGS*GGGRAA
Trigger: AGCAGCTCTACCGCCGCCTCAACTGCCGCCTCGCCT...GGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GACAAAGGAGCTTTAGGTGCATGGAGAACTCTGCATTTCACTGAGTTCTCAGGGACCACGTCCAGCCGATaGGGGGCACGTAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: DKGALGAWRTLHFTEFSGTTSSR*GARRAA
Trigger: AGCTGCTCTACGTGCCCCTCATCGGCTGGACGTGGT...CCCTGAGAACTCAGTGAAATGCAGAGTTCTCCATGCACCTAAAGCTCCTTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
CDS-3UTR TCA 90 bp GGCTTTTCCTTCAAATCAACATCAATGCTCAGCAATACCGCAACGAACAGCGTGGGTGCTTGGTCTCCGTaGAGCGCGTCCCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: GFSFKSTSMLSNTATNSVGAWSP*SASPRS
Trigger: ACTGCGAGGGGACGCGCTTCACGGAGACCAAGCACC...CACGCTGTTCGTTGCGGTATTGCTGAGCATTGATGTTGATTTGAAGGAAAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp TGTGGGAGGCTGAAGACTTCACCTGACAGGCCTTCTGAATTCTTTACTCTTGGCCAGGATCAGGAGAGGTaGTCCGCTGGCAAAGACGCC +
Preference number: 4 (lower is better)
Translates to: CGRLKTSPDRPSEFFTLGQDQER*SAGKDA
Trigger: GGCGTCTTTGCCAGCGGATCACCTCTCCTGATCCTG...GCCAAGAGTAAAGAATTCAGAAGGCCTGTCAGGTGAAGTCTTCAGCCTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR TCA 90 bp GACTGTGGGCTACAGAGTTGCTTCAGCCTGAGCACTCAGCCTGAATTTGGACATTTCGAGGAATGGACCTaGCGTTCGTGCCGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: DCGLQSCFSLSTQPEFGHFEEWT*RSCRCA
Trigger: AGCACACCGGCACGAACGTCAGGTCCATTCCTCGAA...ATGTCCAAATTCAGGCTGAGTGCTCAGGCTGAAGCAACTCTGTAGCCCACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GTTCCCGTCATTCTATTTCCCGAGCAGTTTGTAAGAATGCCACCATTATCCCTGCGAGGAGCCGTGCTCTaGGCAGGTGTGCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: VPVILFPEQFVRMPPLSLRGAVL*AGVHRW
Trigger: CCACCTGTGCACACCTGCTCAGAGCACGGCTCCTCG...CAGGGATAATGGTGGCATTCTTACAAACTGCTCGGGAAATAGAATGACGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR TCA 90 bp GGTGTCGTTGGTCTCATCTGGTTTCGTTGGTCTGCCCCTTCACCCCTGCGAGGATCATCACAGAGACACTaGCCAAGAGGATATGACCAG +
Preference number: 4 (lower is better)
Translates to: GVVGLIWFRWSAPSPLRGSSQRH*PRGYDQ
Trigger: CTGGTCATATCCTCTTGGTCAGTGTCTCTGTGATGA...TCCTCGCAGGGGTGAAGGGGCAGACCAACGAAACCAGATGAGACCAACGACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398063.6
CDS-3UTR GCA 90 bp CTGTGTGTTGGTTTTGAGTTAACTGGATACCACCGTCAGGGCCGCGTGTGTTCAAAGCCGACCAGCAGGTaGAGCACGAACTGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LCVGFELTGYHRQGRVCSKPTSR*STNWVF
Trigger: GAAGACCCAGTTCGTGCTGCACCTGCTGGTCGGCTT...TGAACACACGCGGCCCTGACGGTGGTATCCAGTTAACTCAAAACCAACACACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000291572.13
ENST00000327505.6
ENST00000398058.5
ENST00000398061.5
ENST00000398063.6
ENST00000546158.1
CDS-3UTR GCA 90 bp GGCGACACCAATGTCCCTGGTAACTTCCTGGGCTCCCTAAAAGTGTTCCCGTCAAGGATGATGACTGCGTaGTCCTTCCCAAAGCGCTCT +
Preference number: 4 (lower is better)
Translates to: GDTNVPGNFLGSLKVFPSRMMTA*SFPKRS
Trigger: AGAGCGCTTTGGGAAGGAGCACGCAGTCATCATCCT...TGACGGGAACACTTTTAGGGAGCCCAGGAAGTTACCAGGGACATTGGTGTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291572.13
ENST00000398063.6
CDS-3UTR GCA 90 bp TGTGGGAGGCTGAAGACTTCACCTGACAGGCCTTCTGAATTCTTTACTCTTGGCCCGGAGGCACTTGACTaGGGTGGTGAAGCCCTTGGT +
Preference number: 4 (lower is better)
Translates to: CGRLKTSPDRPSEFFTLGPEALD*GGEALG
Trigger: ACCAAGGGCTTCACCACCGCAGTCAAGTGCCTCCGG...GCCAAGAGTAAAGAATTCAGAAGGCCTGTCAGGTGAAGTCTTCAGCCTCCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.