RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGPAT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169692

Ensembl transcript IDs: ENST00000371694.7, ENST00000371696.7, ENST00000470861.1, ENST00000472820.1, ENST00000538402.1

Found 192 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTCCTCCCATCTaGTCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGG +
Preference number: 1 (lower is better)
Translates to: QRARTVCVWPRGPPI*SWAIGGLVAQPTSG
Trigger: CCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCAGATGGGAGGACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
3UTR CCA 90 bp GCTCGGACAGTGTGCGTCTGGCCTCGGGGTCCTCCCATCTGCTCCTaGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAG +
Preference number: 1 (lower is better)
Translates to: ARTVCVWPRGPPICS*AIGGLVAQPTSGPQ
Trigger: CTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCAGATGGGAGGACCCCGAGGCCAGACGCACACTGTCCGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
3UTR CCA 90 bp GGTGGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTaGCCTCGGGGTCCTCCCATCTGCTCCTGGGCCATCGGGGGCCTT +
Preference number: 1 (lower is better)
Translates to: GGSQAAEQRARTVCV*PRGPPICSWAIGGL
Trigger: AAGGCCCCCGATGGCCCAGGAGCAGATGGGAGGACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCCACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
3UTR GCA 90 bp GGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTaGCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAG +
Preference number: 1 (lower is better)
Translates to: GHSRKPHLYHPSSQR*RGRESLPSSPGRVQ
Trigger: CTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR CCA 90 bp CAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTaGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAG +
Preference number: 1 (lower is better)
Translates to: QPQASSLSSQLPEVP*ARVPALEPGEGPAE
Trigger: CTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR GCA 90 bp GGGAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTaGCCATCCTCCAGCCATCGGCTTCCACCTGCCCTCCCCAGGTCA +
Preference number: 1 (lower is better)
Translates to: GSRTEWYLEAGRSPL*PSSSHRLPPALPRS
Trigger: TGACCTGGGGAGGGCAGGTGGAAGCCGATGGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR CCA 90 bp TTCCTGCTTCCCGGGCTGAGTGAGAGCTGGGGGAGCCGGACAGAGTaGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: FLLPGLSESWGSRTE*YLEAGRSPLCPSSS
Trigger: GCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCCCCCAGCTCTCACTCAGCCCGGGAAGCAGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR TCA 90 bp TGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCCTCCTGCTTCCCGGGCTaGGTGAGAGCTGGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: CRGRESLPSSPGRVQLSPSCFPG*VRAGGA
Trigger: GGCTCCCCCAGCTCTCACTCAGCCCGGGAAGCAGGA...GGGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR TCA 90 bp CAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTTCCTGCTTCCCGGGCTaGGTGAGAGCTGGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: QLPEVPWARVPALEPGEGSCFPG*VRAGGA
Trigger: GGCTCCCCCAGCTCTCACTCAGCCCGGGAAGCAGGA...ACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR GCA 90 bp TGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCCCATCGGCTTCCACCTaGCCTCCCCAGGTCATGCCC +
Preference number: 2 (lower is better)
Translates to: WAIGGLVAQPTSGPQPQAPSAST*PPQVMP
Trigger: GGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGG...GGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR GCA 90 bp GGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTCCATCGGCTTCCACCTaGCCTCCCCAGGTCATGCCC +
Preference number: 2 (lower is better)
Translates to: GSQAAEQRARTVCVWPRGPSAST*PPQVMP
Trigger: GGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGG...ACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
3UTR-3UTR CCA 90 bp TGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCGGGAGCCGGACAGAGTaGTATTTGGAAGCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: WAIGGLVAQPTSGPQPQAGSRTE*YLEAGR
Trigger: CCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCCC...GGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR CCA 90 bp GGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCTGGGAGCCGGACAGAGTaGTATTTGGAAGCCGGGAGG +
Preference number: 2 (lower is better)
Translates to: GPSGALWLSPPAGHSRKPGSRTE*YLEAGR
Trigger: CCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCCC...AGGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR CCA 90 bp TGCTCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGGGACAGAGTGGTATTTaGAAGCCGGGAGGAGTCCCC +
Preference number: 2 (lower is better)
Translates to: CSWAIGGLVAQPTSGPQPGQSGI*KPGGVP
Trigger: GGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC...CGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR CAA 90 bp CTTCCCGGGCTGAGTGAGAGCTGGGGGAGCCGGACAGAGTGGTATTaGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCATCGG +
Preference number: 2 (lower is better)
Translates to: LPGLSESWGSRTEWY*EAGRSPLCPSSSHR
Trigger: CCGATGGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCCCCCAGCTCTCACTCAGCCCGGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR TCA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGTCCTGCTTCCCGGGCTaGGTGAGAGCTGGGGGAGCC +
Preference number: 2 (lower is better)
Translates to: PTSGPQPQASSLSSQLPESCFPG*VRAGGA
Trigger: GGCTCCCCCAGCTCTCACTCAGCCCGGGAAGCAGGA...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR GCA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGCCATCGGCTTCCACCTaGCCTCCCCAGGTCATGCCC +
Preference number: 2 (lower is better)
Translates to: PTSGPQPQASSLSSQLPEPSAST*PPQVMP
Trigger: GGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGG...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR CCA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGGACAGAGTGGTATTTaGAAGCCGGGAGGAGTCCCC +
Preference number: 2 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRGQSGI*KPGGVP
Trigger: GGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR CCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGGACAGAGTGGTATTTaGAAGCCGGGAGGAGTCCCC +
Preference number: 2 (lower is better)
Translates to: HQRATAASLIFIIPAPRGGQSGI*KPGGVP
Trigger: GGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR CAA 90 bp TGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCCCGGACAGAGTGGTATTaGGAAGCCGGGAGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: CRGRESLPSSPGRVQLSPRTEWY*EAGRSP
Trigger: GGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCG...GGGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR GCA 72 bp CGGACAGTGTGCGTCTGGCCTCGGGGTCCTCCCATCTaGTCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: RTVCVWPRGPPI*SWAIGGLVAQP
Trigger: GGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCAGATGGGAGGACCCCGAGGCCAGACGCACACTGTCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
3UTR CCA 72 bp CAGCAGGAGCAGCAGGCCCCGATTCCCGGCTCCCTGTaGCCCAGGGTGCGTGAGTCTGGGACTCCTGGCCTC +
Preference number: 3 (lower is better)
Translates to: QQEQQAPIPGSL*PRVRESGTPGL
Trigger: GAGGCCAGGAGTCCCAGACTCACGCACCCTGGGCCACAGGGAGCCGGGAATCGGGGCCTGCTGCTCCTGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538402.1
3UTR-3UTR CAA 90 bp TGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCCGGACAGAGTGGTATTaGGAAGCCGGGAGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: WAIGGLVAQPTSGPQPQARTEWY*EAGRSP
Trigger: GGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCG...GGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR CCA 72 bp GCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTaGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: ASSLSSQLPEVP*ARVPALEPGEG
Trigger: ACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
3UTR-3UTR CAA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGCGGACAGAGTGGTATTaGGAAGCCGGGAGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: PTSGPQPQASSLSSQLPERTEWY*EAGRSP
Trigger: GGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCG...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp GTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCCCCAGCTCCCAGAGGTaGCGTGGGCGCGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: VPWARVPALEPGEGPAEPPSSQR*RGRESL
Trigger: CAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGG...GGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCAC
76% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp TGCTCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGGGACGTCCGCCGCAGTaGGGCCGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: CSWAIGGLVAQPTSGPQPGRPPQ*GRWWGW
Trigger: CCATCCCCACCAGCGGCCTCACTGCGGCGGACGTCC...CGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTGGCTACTGGGCCGGCTaGACGCCAGACCCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: QLPEVPWARVPALEPGEGGYWAG*TPDPAV
Trigger: CACTGCGGGGTCTGGCGTGCAGCCGGCCCAGTAGCC...ACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCCGTGGTCTGGGCTACTaGGCCGGCTGCACGCCAGAC +
Preference number: 4 (lower is better)
Translates to: VPWARVPALEPGEGPAEPRGLGY*AGCTPD
Trigger: GTCTGGCGTGCAGCCGGCCCAGTAGCCCAGACCACG...GGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp TGCTCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGGGCTACTGGGCCGGCTaGACGCCAGACCCCGCAGTG +
Preference number: 4 (lower is better)
Translates to: CSWAIGGLVAQPTSGPQPGYWAG*TPDPAV
Trigger: CACTGCGGGGTCTGGCGTGCAGCCGGCCCAGTAGCC...CGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp AGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCACGGCGGACACCGTaGAGCACAGCGCGCAGTACA +
Preference number: 4 (lower is better)
Translates to: RCRGRESLPSSPGRVQLSPRRTP*STARST
Trigger: TGTACTGCGCGCTGTGCTTCACGGTGTCCGCCGTGG...GCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp TGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCTCCTGCTTCCCGGGCTaGGTGAGAGCTGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: WAIGGLVAQPTSGPQPQASCFPG*VRAGGA
Trigger: GGCTCCCCCAGCTCTCACTCAGCCCGGGAAGCAGGA...GGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp TGCTCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGGCCCTCCCCAGGTCATaGCCTGCCGTGGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: CSWAIGGLVAQPTSGPQPALPRS*PAVVWA
Trigger: AGCCCAGACCACGGCAGGGCATGACCTGGGGAGGGC...CGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp GGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTCGGGGTCCTCCCATCTaGTCCTGGGCCATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GSQAAEQRARTVCVWPRGRGPPI*SWAIGG
Trigger: GCCCCCGATGGCCCAGGAGCAGATGGGAGGACCCCG...ACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR CCA 90 bp GTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCAGAGCAGCTCCCGCTTaGCGATCTGCACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: VPWARVPALEPGEGPAEPRAAPA*RSARSA
Trigger: AGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCT...GGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp AGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCGGCCGCTGGTGGGGATaGCTTCCAGCACCTGCACTG +
Preference number: 4 (lower is better)
Translates to: RCRGRESLPSSPGRVQLSGRWWG*LPAPAL
Trigger: CAGTGCAGGTGCTGGAAGCCATCCCCACCAGCGGCC...GCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCTTGCCCTGCCGTGGTCTaGGCTACTGGGCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GPSGALWLSPPAGHSRKPCPAVV*ATGPAA
Trigger: TGCAGCCGGCCCAGTAGCCCAGACCACGGCAGGGCA...AGGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCTGGTCATGCCCTGCCGTaGTCTGGGCTACTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GPSGALWLSPPAGHSRKPGHALP*SGLLGR
Trigger: CCGGCCCAGTAGCCCAGACCACGGCAGGGCATGACC...AGGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp TCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAACCATCGGGGGCCTTGTaGCTCAGCCCACCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SWAIGGLVAQPTSGPQPQPSGAL*LSPPAG
Trigger: GCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGG...TTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CCTGGTGGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTGTGGCCCAGGGTGCGTaGGTCTGGGACTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PGGSQAAEQRARTVCVWPVAQGA*VWDSWP
Trigger: GGGCCAGGAGTCCCAGACTCACGCACCCTGGGCCAC...AGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCCACCAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR GCA 90 bp GGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCTCCCCAGGTCATGCCCTaGCGTGGTCTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: GPSGALWLSPPAGHSRKPPQVMP*RGLGYW
Trigger: CCAGTAGCCCAGACCACGGCAGGGCATGACCTGGGG...AGGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp TGCTCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCCATCGGCTTCCACCTaGCCTCCCCAGGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: CSWAIGGLVAQPTSGPQPPSAST*PPQVMP
Trigger: GGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGG...CGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp TGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCGTCCTCATGGCCCGGTaGCAGGTGTCCACGAGCGCA +
Preference number: 4 (lower is better)
Translates to: WAIGGLVAQPTSGPQPQAVLMAR*QVSTSA
Trigger: TGCGCTCGTGGACACCTGCCACCGGGCCATGAGGAC...GGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTGGAAGGTGGTCCTCATaGCCCGGTGGCAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QLPEVPWARVPALEPGEGGRWSS*PGGRCP
Trigger: TGGACACCTGCCACCGGGCCATGAGGACCACCTTCC...ACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp AGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCGGAAGGTGGTCCTCATaGCCCGGTGGCAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RCRGRESLPSSPGRVQLSGRWSS*PGGRCP
Trigger: TGGACACCTGCCACCGGGCCATGAGGACCACCTTCC...GCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp TGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCCAGATGTGGAGGAAGGTaGTCCTCATGGCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: CRGRESLPSSPGRVQLSPRCGGR*SSWPGG
Trigger: GCCACCGGGCCATGAGGACCACCTTCCTCCACATCT...GGGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTGTGGCCCCGTTCTCCTaGGGGGTCTTGGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: QLPEVPWARVPALEPGEGVAPFS*GVLEMW
Trigger: CCACATCTCCAAGACCCCCCAGGAGAACGGGGCCAC...ACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTTGCCCTGCCGTGGTCTaGGCTACTGGGCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GSQAAEQRARTVCVWPRGCPAVV*ATGPAA
Trigger: TGCAGCCGGCCCAGTAGCCCAGACCACGGCAGGGCA...ACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR CCA 90 bp GGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTGGTCATGCCCTGCCGTaGTCTGGGCTACTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: GSQAAEQRARTVCVWPRGGHALP*SGLLGR
Trigger: CCGGCCCAGTAGCCCAGACCACGGCAGGGCATGACC...ACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR CCA 90 bp GTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCGGGAGCCGGACAGAGTaGTATTTGGAAGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: VPWARVPALEPGEGPAEPGSRTE*YLEAGR
Trigger: CCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCCC...GGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCGGAAGGACCTCCATaGGGCCCATCATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QLPEVPWARVPALEPGEGPEGPP*GPSCPG
Trigger: TCCTGGACATGATGGGCCTCATGGAGGTCCTTCCGG...ACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp GGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTTCCCGCTTGGCGATCTaGACGCAGCGCTCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: GSQAAEQRARTVCVWPRGSRLAI*TQRSGR
Trigger: CCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGA...ACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR GCA 90 bp GCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTCCTCCCATCGCCCTCCCCAGGTCATaGCCTGCCGTGGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AAEQRARTVCVWPRGPPIALPRS*PAVVWA
Trigger: AGCCCAGACCACGGCAGGGCATGACCTGGGGAGGGC...GATGGGAGGACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR GCA 90 bp GCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTCCTCCCATCACCCTGGAGCCCAGCTaGACCCTGGTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: AAEQRARTVCVWPRGPPITLEPS*TLVGPR
Trigger: CCTGGGACCCACCAGGGTGCAGCTGGGCTCCAGGGT...GATGGGAGGACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR CCA 90 bp CCTGGTGGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGTGGTCTGGGCTACTaGGCCGGCTGCACGCCAGAC +
Preference number: 4 (lower is better)
Translates to: PGGSQAAEQRARTVCVWPRGLGY*AGCTPD
Trigger: GTCTGGCGTGCAGCCGGCCCAGTAGCCCAGACCACG...AGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCCACCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR TCA 90 bp TCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGGTGGTTGGAGACGATaGCACAGGGACGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SWAIGGLVAQPTSGPQPQGGWRR*HRDGPP
Trigger: AGGAGGCCCGTCCCTGTGTCATCGTCTCCAACCACC...TTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp GTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCAACGGAGTACAGTGCTaGCCCCACAGAGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VPWARVPALEPGEGPAEPNGVQC*PHRVFQ
Trigger: CTGGAAGACTCTGTGGGGTCAGCACTGTACTCCGTT...GGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp TCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAAGTACAGGGCGACCTTaGCGTAGAACTCGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: SWAIGGLVAQPTSGPQPQSTGRP*RRTRPR
Trigger: GCGCGGCCGAGTTCTACGCCAAGGTCGCCCTGTACT...TTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp TCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAACACCACGGGGACGATaGGCACCTGTGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: SWAIGGLVAQPTSGPQPQTPRGR*APVPGL
Trigger: CAGTCCAGGCACAGGTGCCCATCGTCCCCGTGGTGT...TTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp AGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCGGACGTCCGCCGCAGTaGGGCCGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SRTEWYLEAGRSPLCPSSGRPPQ*GRWWGW
Trigger: CCATCCCCACCAGCGGCCTCACTGCGGCGGACGTCC...GGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGGACGTCCGCCGCAGTaGGGCCGCTGGTGGGGATGG +
Preference number: 4 (lower is better)
Translates to: PTSGPQPQASSLSSQLPEGRPPQ*GRWWGW
Trigger: CCATCCCCACCAGCGGCCTCACTGCGGCGGACGTCC...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTGCAGTGCTAGAGCGCTaGCGGTTGATGAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: QLPEVPWARVPALEPGEGAVLER*RLMKKT
Trigger: CGTCTTCTTCATCAACCGGCAGCGCTCTAGCACTGC...ACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCACCGTCCGGCCGCCGTaGCGCAGCAGGCAGACGAGC +
Preference number: 4 (lower is better)
Translates to: GQSGIWKPGGVPSAHPPATVRPP*RSRQTS
Trigger: GCTCGTCTGCCTGCTGCGCCACGGCGGCCGGACGGT...GGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CCTGGTGGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCCGGAAGGACCTCCATaGGGCCCATCATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PGGSQAAEQRARTVCVWPPEGPP*GPSCPG
Trigger: TCCTGGACATGATGGGCCTCATGGAGGTCCTTCCGG...AGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCCACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR TCA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGGTGGCCCAGGGTGCGTaGGTCTGGGACTCCTGGCCC +
Preference number: 4 (lower is better)
Translates to: PDRVVFGSREESPLPILQVAQGA*VWDSWP
Trigger: GGGCCAGGAGTCCCAGACTCACGCACCCTGGGCCAC...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR GCA 90 bp AGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCATCATGTCCAGGATaGTCTGGTGGTTGGAGACGA +
Preference number: 4 (lower is better)
Translates to: RCRGRESLPSSPGRVQLSPSCPG*SGGWRR
Trigger: TCGTCTCCAACCACCAGAGCATCCTGGACATGATGG...GCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp TGCTCCTGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGGCAGTGCTAGAGCGCTaGCGGTTGATGAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: CSWAIGGLVAQPTSGPQPAVLER*RLMKKT
Trigger: CGTCTTCTTCATCAACCGGCAGCGCTCTAGCACTGC...CGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCAGGAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCCCCAGCTCCCAGAGGTaGCGTGGGCGCGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRPSSQR*RGRESL
Trigger: CAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGG...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGACCCAGCTCCCAGAGGTaGCGTGGGCGCGAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRPSSQR*RGRESL
Trigger: CAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGG...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp GGAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCGGGGTCCTCCCATCTaGTCCTGGGCCATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: GAGQSGIWKPGGVPSAHPRGPPI*SWAIGG
Trigger: GCCCCCGATGGCCCAGGAGCAGATGGGAGGACCCCG...AGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGCGGGGTCCTCCCATCTaGTCCTGGGCCATCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PTSGPQPQASSLSSQLPERGPPI*SWAIGG
Trigger: GCCCCCGATGGCCCAGGAGCAGATGGGAGGACCCCG...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp TGGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCGGTCCCCATTGTCGTTaGGAGTACCCTCGGGATAGA +
Preference number: 4 (lower is better)
Translates to: WAIGGLVAQPTSGPQPQAGPHCR*EYPRDR
Trigger: TCTATCCCGAGGGTACTCGCAACGACAATGGGGACC...GGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTACCGTCCGGCCGCCGTaGCGCAGCAGGCAGACGAGC +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGTVRPP*RSRQTS
Trigger: GCTCGTCTGCCTGCTGCGCCACGGCGGCCGGACGGT...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp TGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCCATGTCCAGGATGCTCTaGTGGTTGGAGACGATGACA +
Preference number: 4 (lower is better)
Translates to: CRGRESLPSSPGRVQLSPMSRML*WLETMT
Trigger: TGTCATCGTCTCCAACCACCAGAGCATCCTGGACAT...GGGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCCTCCCAGAGGTGCCGTaGGCGCGAGTCCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRLPEVP*ARVPAL
Trigger: GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAG...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp TCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCCTCCCAGAGGTGCCGTaGGCGCGAGTCCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: SSLSSQLPEVPWARVPALLPEVP*ARVPAL
Trigger: GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAG...GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGCTCCCAGAGGTGCCGTaGGCGCGAGTCCCTGCCCTC +
Preference number: 4 (lower is better)
Translates to: PTSGPQPQASSLSSQLPELPEVP*ARVPAL
Trigger: GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAG...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCCATCGGGGGCCTTGTaGCTCAGCCCACCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LIFIIPAPRGAVGASPCPPSGAL*LSPPAG
Trigger: GCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGG...AGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp TCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCCCATCGGGGGCCTTGTaGCTCAGCCCACCAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SSLSSQLPEVPWARVPALPSGAL*LSPPAG
Trigger: GCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGG...GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCTCCTGCTTCCCGGGCTaGGTGAGAGCTGGGGGAGCC +
Preference number: 4 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRSCFPG*VRAGGA
Trigger: GGCTCCCCCAGCTCTCACTCAGCCCGGGAAGCAGGA...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp GGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCTGGGTCCCAGGCGGCTaGGCAGAGGGCTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: GQSGIWKPGGVPSAHPPAWVPGG*AEGSDS
Trigger: ACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCCA...GGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR TCA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGTGGGTCCCAGGCGGCTaGGCAGAGGGCTCGGACAGT +
Preference number: 4 (lower is better)
Translates to: PTSGPQPQASSLSSQLPEWVPGG*AEGSDS
Trigger: ACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCCA...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR GCA 90 bp AGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCGCCCTCCCCAGGTCATaGCCTGCCGTGGTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SRTEWYLEAGRSPLCPSSALPRS*PAVVWA
Trigger: AGCCCAGACCACGGCAGGGCATGACCTGGGGAGGGC...GGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp GAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCACCCTGGAGCCCAGCTaGACCCTGGTGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EPDRVVFGSREESPLPILTLEPS*TLVGPR
Trigger: CCTGGGACCCACCAGGGTGCAGCTGGGCTCCAGGGT...GAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR CCA 90 bp TCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCTGCCCTGCCGTGGTCTaGGCTACTGGGCCGGCTGCA +
Preference number: 4 (lower is better)
Translates to: SSLSSQLPEVPWARVPALCPAVV*ATGPAA
Trigger: TGCAGCCGGCCCAGTAGCCCAGACCACGGCAGGGCA...GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp AGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCGGTCATGCCCTGCCGTaGTCTGGGCTACTGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRTEWYLEAGRSPLCPSSGHALP*SGLLGR
Trigger: CCGGCCCAGTAGCCCAGACCACGGCAGGGCATGACC...GGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTCCTCCCATCGGACAGAGTGGTATTTaGAAGCCGGGAGGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: AAEQRARTVCVWPRGPPIGQSGI*KPGGVP
Trigger: GGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC...GATGGGAGGACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR TCA 90 bp CGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGCCACGGCGGACACCGTaGAGCACAGCGCGCAGTACA +
Preference number: 4 (lower is better)
Translates to: RATAASLIFIIPAPRGAVPRRTP*STARST
Trigger: TGTACTGCGCGCTGTGCTTCACGGTGTCCGCCGTGG...CACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp TCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCTGGGCACGTTCTCCCTaGCCATGCGCTCGCCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSLSSQLPEVPWARVPALWARSP*PCARPG
Trigger: ACCTGGGCGAGCGCATGGTCAGGGAGAACGTGCCCA...GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371694.7
CDS-3UTR TCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGTGGCCCAGGGTGCGTaGGTCTGGGACTCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGVAQGA*VWDSWP
Trigger: AGGCCAGGAGTCCCAGACTCACGCACCCTGGGCCAC...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538402.1
CDS-3UTR GCA 90 bp CGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGTCCCGCTTGGCGATCTaGACGCAGCGCTCCGGAAGG +
Preference number: 4 (lower is better)
Translates to: RATAASLIFIIPAPRGAVSRLAI*TQRSGR
Trigger: CCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGA...CACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp GGGCCATCGGGGGCCTTGTGGCTCAGCCCACCAGCGGGCCACAGCCGCAAGCCTATGGCTTCCAGCACCTaGACTGTGACTGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GPSGALWLSPPAGHSRKPMASST*TVTVPE
Trigger: TTCAGGAACAGTCACAGTGCAGGTGCTGGAAGCCAT...AGGCTTGCGGCTGTGGCCCGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCCCAGGTCATGCCCTaGCGTGGTCTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: PDRVVFGSREESPLPILQPQVMP*RGLGYW
Trigger: CCAGTAGCCCAGACCACGGCAGGGCATGACCTGGGG...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp AGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCCCCCAGGTCATGCCCTaGCGTGGTCTGGGCTACTGG +
Preference number: 4 (lower is better)
Translates to: SRTEWYLEAGRSPLCPSSPQVMP*RGLGYW
Trigger: CCAGTAGCCCAGACCACGGCAGGGCATGACCTGGGG...GGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCATCGGCTTCCACCTaGCCTCCCCAGGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: PDRVVFGSREESPLPILQPSAST*PPQVMP
Trigger: GGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGG...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAAGGGCTCGGACAGTGTaGGTCTGGCCTCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRRARTV*VWPRGP
Trigger: AGGACCCCGAGGCCAGACGCACACTGTCCGAGCCCT...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR GCA 90 bp GGAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTAGGGCTCGGACAGTGTaGGTCTGGCCTCGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: GAGQSGIWKPGGVPSAHPRARTV*VWPRGP
Trigger: AGGACCCCGAGGCCAGACGCACACTGTCCGAGCCCT...AGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR CCA 90 bp GGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCGGCCGCTGGTGGGGATaGCTTCCAGCACCTGCACTG +
Preference number: 4 (lower is better)
Translates to: GQSGIWKPGGVPSAHPPAGRWWG*LPAPAL
Trigger: CAGTGCAGGTGCTGGAAGCCATCCCCACCAGCGGCC...GGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGTCCTCATGGCCCGGTaGCAGGTGTCCACGAGCGCA +
Preference number: 4 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRVLMAR*QVSTSA
Trigger: TGCGCTCGTGGACACCTGCCACCGGGCCATGAGGAC...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGTCCTCATGGCCCGGTaGCAGGTGTCCACGAGCGCA +
Preference number: 4 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRVLMAR*QVSTSA
Trigger: TGCGCTCGTGGACACCTGCCACCGGGCCATGAGGAC...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCGGACAGTGTGCGTCTaGCCTCGGGGTCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: EPDRVVFGSREESPLPILRTVCV*PRGPPI
Trigger: GATGGGAGGACCCCGAGGCCAGACGCACACTGTCCG...GAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR CCA 90 bp CTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGGACAGTGTGCGTCTaGCCTCGGGGTCCTCCCATC +
Preference number: 4 (lower is better)
Translates to: LIFIIPAPRGAVGASPCPRTVCV*PRGPPI
Trigger: GATGGGAGGACCCCGAGGCCAGACGCACACTGTCCG...AGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR TCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTCCACGGCGGACACCGTaGAGCACAGCGCGCAGTACA +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGPRRTP*STARST
Trigger: TGTACTGCGCGCTGTGCTTCACGGTGTCCGCCGTGG...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGGTGGTTGGAGACGATaGCACAGGGACGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: PTSGPQPQASSLSSQLPEGGWRR*HRDGPP
Trigger: AGGAGGCCCGTCCCTGTGTCATCGTCTCCAACCACC...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp TCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGGTGGTTGGAGACGATaGCACAGGGACGGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSLSSQLPEVPWARVPALGGWRR*HRDGPP
Trigger: AGGAGGCCCGTCCCTGTGTCATCGTCTCCAACCACC...GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTAGTACAGGGCGACCTTaGCGTAGAACTCGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: LIFIIPAPRGAVGASPCPSTGRP*RRTRPR
Trigger: GCGCGGCCGAGTTCTACGCCAAGGTCGCCCTGTACT...AGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTAGAGCAGCTCCCGCTTaGCGATCTGCACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: LIFIIPAPRGAVGASPCPRAAPA*RSARSA
Trigger: AGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCT...AGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGAGAGCAGCTCCCGCTTaGCGATCTGCACGCAGCGCT +
Preference number: 4 (lower is better)
Translates to: RATAASLIFIIPAPRGAVRAAPA*RSARSA
Trigger: AGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCT...CACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGGCCGCTGGTGGGGATaGCTTCCAGCACCTGCACTG +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGGRWWG*LPAPAL
Trigger: CAGTGCAGGTGCTGGAAGCCATCCCCACCAGCGGCC...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCGGAAGGTGGTCCTCATaGCCCGGTGGCAGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GQSGIWKPGGVPSAHPPAGRWSS*PGGRCP
Trigger: TGGACACCTGCCACCGGGCCATGAGGACCACCTTCC...GGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCGTGGCCCCGTTCTCCTaGGGGGTCTTGGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: GQSGIWKPGGVPSAHPPAVAPFS*GVLEMW
Trigger: CCACATCTCCAAGACCCCCCAGGAGAACGGGGCCAC...GGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGGCCCCGTTCTCCTaGGGGGTCTTGGAGATGTGG +
Preference number: 4 (lower is better)
Translates to: PTSGPQPQASSLSSQLPEVAPFS*GVLEMW
Trigger: CCACATCTCCAAGACCCCCCAGGAGAACGGGGCCAC...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAATTCCCGGCTCCCTGTaGCCCAGGGTGCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRIPGSL*PRVRES
Trigger: AGACTCACGCACCCTGGGCCACAGGGAGCCGGGAAT...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GGAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTATTCCCGGCTCCCTGTaGCCCAGGGTGCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GAGQSGIWKPGGVPSAHPIPGSL*PRVRES
Trigger: AGACTCACGCACCCTGGGCCACAGGGAGCCGGGAAT...AGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCATTCCCGGCTCCCTGTaGCCCAGGGTGCGTGAGTCT +
Preference number: 4 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRIPGSL*PRVRES
Trigger: AGACTCACGCACCCTGGGCCACAGGGAGCCGGGAAT...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCACACCACGGGGACGATaGGCACCTGTGCCTGGACTG +
Preference number: 4 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRTPRGR*APVPGL
Trigger: CAGTCCAGGCACAGGTGCCCATCGTCCCCGTGGTGT...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCGGAAGGACCTCCATaGGGCCCATCATGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: PDRVVFGSREESPLPILQPEGPP*GPSCPG
Trigger: TCCTGGACATGATGGGCCTCATGGAGGTCCTTCCGG...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCACTGTGACTGTTCCTaGAGTGAAGAACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: QLPEVPWARVPALEPGEGHCDCS*SEELLL
Trigger: AAGAAGAAGTTCTTCACTTCAGGAACAGTCACAGTG...ACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp TCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCCTCTCCCAGAGAGCCTaGTGCAGCTTGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SSLSSQLPEVPWARVPALLSQRA*CSLWAG
Trigger: TCCAGCCCACAAGCTGCATCAGGCTCTCTGGGAGAG...GAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR TCA 90 bp AGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCCTCTCCCAGAGAGCCTaGTGCAGCTTGTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRTEWYLEAGRSPLCPSSLSQRA*CSLWAG
Trigger: TCCAGCCCACAAGCTGCATCAGGCTCTCTGGGAGAG...GGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS-3UTR GCA 90 bp AGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCCACCTGTGCCTGGACTaGCAGGTAGAAGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: SRTEWYLEAGRSPLCPSSHLCLD*QVEGAL
Trigger: AAGGGCGCCTTCTACCTGGCAGTCCAGGCACAGGTG...GGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp GGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCCACCTGTGCCTGGACTaGCAGGTAGAAGGCGCCCTT +
Preference number: 4 (lower is better)
Translates to: GQSGIWKPGGVPSAHPPAHLCLD*QVEGAL
Trigger: AAGGGCGCCTTCTACCTGGCAGTCCAGGCACAGGTG...GGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTAGTACAGGGCGACCTTaGCGTAGAACTCGGCCGCGC +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGSTGRP*RRTRPR
Trigger: GCGCGGCCGAGTTCTACGCCAAGGTCGCCCTGTACT...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCAGATGTGGAGGAAGGTaGTCCTCATGGCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: EPDRVVFGSREESPLPILRCGGR*SSWPGG
Trigger: GCCACCGGGCCATGAGGACCACCTTCCTCCACATCT...GAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCAGATGTGGAGGAAGGTaGTCCTCATGGCCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRRCGGR*SSWPGG
Trigger: GCCACCGGGCCATGAGGACCACCTTCCTCCACATCT...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCGGGAGCCGGACAGAGTaGTATTTGGAAGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: EPDRVVFGSREESPLPILGSRTE*YLEAGR
Trigger: CCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCCC...GAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCGGGAGCCGGACAGAGTaGTATTTGGAAGCCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GQSGIWKPGGVPSAHPPAGSRTE*YLEAGR
Trigger: CCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCCC...GGCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGAGACGATGGGCACCTGTaGCTGGACTGCCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRDDGHL*LDCQVE
Trigger: TTCTACCTGGCAGTCCAGGCACAGGTGCCCATCGTC...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGACGATGGGCACCTGTaGCTGGACTGCCAGGTAGAA +
Preference number: 4 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRDDGHL*LDCQVE
Trigger: TTCTACCTGGCAGTCCAGGCACAGGTGCCCATCGTC...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp GAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCGGACAGAGTGGTATTTaGAAGCCGGGAGGAGTCCCC +
Preference number: 4 (lower is better)
Translates to: EPDRVVFGSREESPLPILGQSGI*KPGGVP
Trigger: GGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCC...GAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCAACGGAGTACAGTGCTaGCCCCACAGAGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: RTEWYLEAGRSPLCPSSSNGVQC*PHRVFQ
Trigger: CTGGAAGACTCTGTGGGGTCAGCACTGTACTCCGTT...GCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCGCAGTGCTAGAGCGCTaGCGGTTGATGAAGAAGACG +
Preference number: 4 (lower is better)
Translates to: RTEWYLEAGRSPLCPSSSAVLER*RLMKKT
Trigger: CGTCTTCTTCATCAACCGGCAGCGCTCTAGCACTGC...GCTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGGGTCCCCATTGTCGTTaGGAGTACCCTCGGGATAGA +
Preference number: 4 (lower is better)
Translates to: PDRVVFGSREESPLPILQGPHCR*EYPRDR
Trigger: TCTATCCCGAGGGTACTCGCAACGACAATGGGGACC...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp GGAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTGCCCGTAAAAGTACTTaGAGCTTCGCACGAACCAGC +
Preference number: 4 (lower is better)
Translates to: GAGQSGIWKPGGVPSAHPARKST*SFARTS
Trigger: GCTGGTTCGTGCGAAGCTTCAAGTACTTTTACGGGC...AGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGACCATCATGTCCAGGATaGTCTGGTGGTTGGAGACGA +
Preference number: 4 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRPSCPG*SGGWRR
Trigger: TCGTCTCCAACCACCAGAGCATCCTGGACATGATGG...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCCGTAAAAGTACTTaGAGCTTCGCACGAACCAGC +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGARKST*SFARTS
Trigger: GCTGGTTCGTGCGAAGCTTCAAGTACTTTTACGGGC...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTCCATCATGTCCAGGATaGTCTGGTGGTTGGAGACGA +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGPSCPG*SGGWRR
Trigger: TCGTCTCCAACCACCAGAGCATCCTGGACATGATGG...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp GGAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTATGGCTTCCAGCACCTaGACTGTGACTGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GAGQSGIWKPGGVPSAHPMASST*TVTVPE
Trigger: TTCAGGAACAGTCACAGTGCAGGTGCTGGAAGCCAT...AGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR GCA 90 bp CGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGATGGCTTCCAGCACCTaGACTGTGACTGTTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RATAASLIFIIPAPRGAVMASST*TVTVPE
Trigger: TTCAGGAACAGTCACAGTGCAGGTGCTGGAAGCCAT...CACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGATGTCCAGGATGCTCTaGTGGTTGGAGACGATGACA +
Preference number: 4 (lower is better)
Translates to: PDRVVFGSREESPLPILQMSRML*WLETMT
Trigger: TGTCATCGTCTCCAACCACCAGAGCATCCTGGACAT...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTATGTCCAGGATGCTCTaGTGGTTGGAGACGATGACA +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGMSRML*WLETMT
Trigger: TGTCATCGTCTCCAACCACCAGAGCATCCTGGACAT...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCACTGTGACTGTTCCTaGAGTGAAGAACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LIFIIPAPRGAVGASPCPHCDCS*SEELLL
Trigger: AAGAAGAAGTTCTTCACTTCAGGAACAGTCACAGTG...AGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR TCA 90 bp CACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTCACTGTGACTGTTCCTaGAGTGAAGAACTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: HQRATAASLIFIIPAPRGHCDCS*SEELLL
Trigger: AAGAAGAAGTTCTTCACTTCAGGAACAGTCACAGTG...ACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp GTGCCGTGGGCGCGAGTCCCTGCCCTCGAGCCCGGGGAGGGTCCAGCTGAGCCCGGGCCATCGGGGGCCTaGTGGCTCAGCCCACCAGCG +
Preference number: 5 (lower is better)
Translates to: VPWARVPALEPGEGPAEPGPSGA*WLSPPA
Trigger: CGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCC...GGGCTCAGCTGGACCCTCCCCGGGCTCGAGGGCAGGGACTCGCGCCCACGGCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp GGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTGGGCCATCGGGGGCCTaGTGGCTCAGCCCACCAGCG +
Preference number: 5 (lower is better)
Translates to: GSQAAEQRARTVCVWPRGGPSGA*WLSPPA
Trigger: CGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCC...ACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS CCA 90 bp CCAGCCATCGGCTTCCACCTGCCCTCCCCAGGTCATGCCCTGCCGTaGTCTGGGCTACTGGGCCGGCTGCACGCCAGACCCCGCAGTGGC +
Preference number: 5 (lower is better)
Translates to: PAIGFHLPSPGHALP*SGLLGRLHARPRSG
Trigger: GCCACTGCGGGGTCTGGCGTGCAGCCGGCCCAGTAGCCCAGACCACGGCAGGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp GCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGGGTCCTCCCATCGGGCCATCGGGGGCCTaGTGGCTCAGCCCACCAGCG +
Preference number: 5 (lower is better)
Translates to: AAEQRARTVCVWPRGPPIGPSGA*WLSPPA
Trigger: CGCTGGTGGGCTGAGCCACAAGGCCCCCGATGGCCC...GATGGGAGGACCCCGAGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS TCA 90 bp CGCCGTGGCGCAGCAGGCAGACGAGCGAGGCCACGGCGGACACCGTaGAGCACAGCGCGCAGTACAGGGCGACCTTGGCGTAGAACTCGG +
Preference number: 5 (lower is better)
Translates to: RRGAAGRRARPRRTP*STARSTGRPWRRTR
Trigger: CCGAGTTCTACGCCAAGGTCGCCCTGTACTGCGCGCTGTGCTTCACGGTGTCCGCCGTGGCCTCGCTCGTCTGCCTGCTGCGCCACGGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000470861.1
ENST00000538402.1
CDS GCA 90 bp ATCCTCCAGCCATCGGCTTCCACCTGCCCTCCCCAGGTCATGCCCTaGCGTGGTCTGGGCTACTGGGCCGGCTGCACGCCAGACCCCGCA +
Preference number: 5 (lower is better)
Translates to: ILQPSASTCPPQVMP*RGLGYWAGCTPDPA
Trigger: TGCGGGGTCTGGCGTGCAGCCGGCCCAGTAGCCCAGACCACGGCAGGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGGCTGGAGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS GCA 90 bp CGGGAGGAGTCCCCTCTGCCCATCCTCCAGCCATCGGCTTCCACCTaGCCTCCCCAGGTCATGCCCTGCCGTGGTCTGGGCTACTGGGCC +
Preference number: 5 (lower is better)
Translates to: REESPLPILQPSAST*PPQVMPCRGLGYWA
Trigger: GGCCCAGTAGCCCAGACCACGGCAGGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGGCTGGAGGATGGGCAGAGGGGACTCCTCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS CCA 90 bp ACGAACCAGCCGATGATGCTCATGTTCTCCACCGTCCGGCCGCCGTaGCGCAGCAGGCAGACGAGCGAGGCCACGGCGGACACCGTGAAG +
Preference number: 5 (lower is better)
Translates to: TNQPMMLMFSTVRPP*RSRQTSEATADTVK
Trigger: CTTCACGGTGTCCGCCGTGGCCTCGCTCGTCTGCCTGCTGCGCCACGGCGGCCGGACGGTGGAGAACATGAGCATCATCGGCTGGTTCGT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000470861.1
ENST00000538402.1
CDS CCA 90 bp ACAGCGTGCGCTGGAAGACAGCTGCTGAGCACCCACAGGCCTGCCTaGCACCCTGCCTTCTCCCTGGCTACCTGGACGGGTCGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: TACAGRQLLSTHRPA*HPAFSLATWTGRVA
Trigger: GGCCACACGACCCGTCCAGGTAGCCAGGGAGAAGGCAGGGTGCCAGGCAGGCCTGTGGGTGCTCAGCAGCTGTCTTCCAGCGCACGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS TCA 90 bp CCGGCCTACCCATCATGTCCAGGATGCTCTGGTGGTTGGAGACGATaGCACAGGGACGGGCCTCCTGCAGCCTGCGCGGGTCCCGCACCT +
Preference number: 5 (lower is better)
Translates to: PAYPSCPGCSGGWRR*HRDGPPAACAGPAP
Trigger: AGGTGCGGGACCCGCGCAGGCTGCAGGAGGCCCGTCCCTGTGTCATCGTCTCCAACCACCAGAGCATCCTGGACATGATGGGTAGGCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470861.1
CDS GCA 90 bp ATGAGGCCCACGGGCCCCAGGAAGAGCAGCTCCCGCTTGGCGATCTaGACGCAGCGCTCCGGAAGGACCTCCATGAGGCCCATCATGTCC +
Preference number: 5 (lower is better)
Translates to: MRPTGPRKSSSRLAI*TQRSGRTSMRPIMS
Trigger: GGACATGATGGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCTTCCTGGGGCCCGTGGGCCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp CCTGGTGGGTCCCAGGCGGCTGAGCAGAGGGCTCGGACAGTGTGCGTCTGGCCTCGGACAGAGTGGTATTaGGAAGCCGGGAGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: PGGSQAAEQRARTVCVWPRTEWY*EAGRSP
Trigger: GGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCG...AGGCCAGACGCACACTGTCCGAGCCCTCTGCTCAGCCGCCTGGGACCCACCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371694.7
ENST00000371696.7
CDS TCA 90 bp GCTCCCGCTTGGCGATCTGCACGCAGCGCTCCGGAAGGACCTCCATaGGGCCTGGGAGACAGAGAGACAGAGACAGAGAGAGAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: APAWRSARSAPEGPP*GLGDRETETEREGE
Trigger: CTCCCCCTCTCTCTCTGTCTCTGTCTCTCTGTCTCCCAGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS-3UTR CAA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGAAGAGCAGCTCCCGCTaGGCGATCTGCACGCAGCGC +
Preference number: 5 (lower is better)
Translates to: PDRVVFGSREESPLPILQKSSSR*AICTQR
Trigger: GCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCTT...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp GAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCAAGAGCAGCTCCCGCTaGGCGATCTGCACGCAGCGC +
Preference number: 5 (lower is better)
Translates to: EPDRVVFGSREESPLPILKSSSR*AICTQR
Trigger: GCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCTT...GAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS GCA 90 bp CGCTCGCCCAGGTCGGCCATCACTGTCATGGCAGTGCTAGAGCGCTaGCGGTTGATGAAGAAGACGCCCCCGAGGTACATGATGAGGCCC +
Preference number: 5 (lower is better)
Translates to: RSPRSAITVMAVLER*RLMKKTPPRYMMRP
Trigger: GGGCCTCATCATGTACCTCGGGGGCGTCTTCTTCATCAACCGGCAGCGCTCTAGCACTGCCATGACAGTGATGGCCGACCTGGGCGAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000472820.1
ENST00000538402.1
CDS GCA 90 bp CTGGGAGACAGAGAGACAGAGACAGAGAGAGAGGGGGAGACAGCGTaGGCTGGAAGACAGCTGCTGAGCACCCACAGGCCTGCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: LGDRETETEREGETA*AGRQLLSTHRPAWH
Trigger: GTGCCAGGCAGGCCTGTGGGTGCTCAGCAGCTGTCTTCCAGCGCACGCTGTCTCCCCCTCTCTCTCTGTCTCTGTCTCTCTGTCTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS-3UTR CAA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGCTAGAGCGCTGCCGGTaGATGAAGAAGACGCCCCCG +
Preference number: 5 (lower is better)
Translates to: PDRVVFGSREESPLPILQLERCR*MKKTPP
Trigger: CGGGGGCGTCTTCTTCATCAACCGGCAGCGCTCTAG...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp AGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCCTAGAGCGCTGCCGGTaGATGAAGAAGACGCCCCCG +
Preference number: 5 (lower is better)
Translates to: SRTEWYLEAGRSPLCPSSLERCR*MKKTPP
Trigger: CGGGGGCGTCTTCTTCATCAACCGGCAGCGCTCTAG...GGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGACTAGAGCGCTGCCGGTaGATGAAGAAGACGCCCCCG +
Preference number: 5 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRLERCR*MKKTPP
Trigger: CGGGGGCGTCTTCTTCATCAACCGGCAGCGCTCTAG...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGGCAGCAGGTCCCCATaGTCGTTGCGAGTACCCTCG +
Preference number: 5 (lower is better)
Translates to: PTSGPQPQASSLSSQLPEGSRSP*SLRVPS
Trigger: CGAGGGTACTCGCAACGACAATGGGGACCTGCTGCC...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp CACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGGCAGCAGGTCCCCATaGTCGTTGCGAGTACCCTCG +
Preference number: 5 (lower is better)
Translates to: HSRKPHLYHPSSQRCRGRGSRSP*SLRVPS
Trigger: CGAGGGTACTCGCAACGACAATGGGGACCTGCTGCC...GCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371696.7
ENST00000538402.1
CDS CCA 90 bp CTTGGCGATCTGCACGCAGCGCTCCGGAAGGACCTCCATGAGGCCTaGGAGACAGAGAGACAGAGACAGAGAGAGAGGGGGAGACAGCGT +
Preference number: 5 (lower is better)
Translates to: LGDLHAALRKDLHEA*ETERQRQRERGRQR
Trigger: ACGCTGTCTCCCCCTCTCTCTCTGTCTCTGTCTCTCTGTCTCCCAGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS-3UTR CAA 90 bp ATCTTTATCATCCCAGCTCCCAGAGGTGCCGTGGGCGCGAGTCCCTGCCCTCGACGGACAGAGTGGTATTaGGAAGCCGGGAGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: IFIIPAPRGAVGASPCPRRTEWY*EAGRSP
Trigger: GGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCG...TCGAGGGCAGGGACTCGCGCCCACGGCACCTCTGGGAGCTGGGATGATAAAGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp GGAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCGGACAGAGTGGTATTaGGAAGCCGGGAGGAGTCCC +
Preference number: 5 (lower is better)
Translates to: GAGQSGIWKPGGVPSAHPRTEWY*EAGRSP
Trigger: GGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCG...AGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp GAGCCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCAGGATGCTCTGGTGGTaGGAGACGATGACACAGGGA +
Preference number: 5 (lower is better)
Translates to: EPDRVVFGSREESPLPILRMLWW*ETMTQG
Trigger: TCCCTGTGTCATCGTCTCCAACCACCAGAGCATCCT...GAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp CCCACCAGCGGGCCACAGCCGCAAGCCTCATCTTTATCATCCCAGCTCCCAGAGAGGATGCTCTGGTGGTaGGAGACGATGACACAGGGA +
Preference number: 5 (lower is better)
Translates to: PTSGPQPQASSLSSQLPERMLWW*ETMTQG
Trigger: TCCCTGTGTCATCGTCTCCAACCACCAGAGCATCCT...CTCTGGGAGCTGGGATGATAAAGATGAGGCTTGCGGCTGTGGCCCGCTGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS-3UTR CAA 90 bp CCGGACAGAGTGGTATTTGGAAGCCGGGAGGAGTCCCCTCTGCCCATCCTCCAGAGGATGCTCTGGTGGTaGGAGACGATGACACAGGGA +
Preference number: 5 (lower is better)
Translates to: PDRVVFGSREESPLPILQRMLWW*ETMTQG
Trigger: TCCCTGTGTCATCGTCTCCAACCACCAGAGCATCCT...CTGGAGGATGGGCAGAGGGGACTCCTCCCGGCTTCCAAATACCACTCTGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS GCA 72 bp GTCATGCCCTGCCGTGGTCTGGGCTACTGGGCCGGCTaGACGCCAGACCCCGCAGTGGCCCCGTTCTCCTGG +
Preference number: 6 (lower is better)
Translates to: VMPCRGLGYWAG*TPDPAVAPFSW
Trigger: CCAGGAGAACGGGGCCACTGCGGGGTCTGGCGTGCAGCCGGCCCAGTAGCCCAGACCACGGCAGGGCATGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000472820.1
ENST00000538402.1
CDS CCA 72 bp GGCTTCCACCTGCCCTCCCCAGGTCATGCCCTGCCGTaGTCTGGGCTACTGGGCCGGCTGCACGCCAGACCC +
Preference number: 6 (lower is better)
Translates to: GFHLPSPGHALP*SGLLGRLHARP
Trigger: GGGTCTGGCGTGCAGCCGGCCCAGTAGCCCAGACCACGGCAGGGCATGACCTGGGGAGGGCAGGTGGAAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS TCA 72 bp GGCAGGTGTCCACGAGCGCAGGGACGTCCGCCGCAGTaGGGCCGCTGGTGGGGATGGCTTCCAGCACCTGCA +
Preference number: 6 (lower is better)
Translates to: GRCPRAQGRPPQ*GRWWGWLPAPA
Trigger: TGCAGGTGCTGGAAGCCATCCCCACCAGCGGCCTCACTGCGGCGGACGTCCCTGCGCTCGTGGACACCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000472820.1
ENST00000538402.1
CDS GCA 72 bp CCATCGGCTTCCACCTGCCCTCCCCAGGTCATGCCCTaGCGTGGTCTGGGCTACTGGGCCGGCTGCACGCCA +
Preference number: 6 (lower is better)
Translates to: PSASTCPPQVMP*RGLGYWAGCTP
Trigger: TGGCGTGCAGCCGGCCCAGTAGCCCAGACCACGGCAGGGCATGACCTGGGGAGGGCAGGTGGAAGCCGATGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS CCA 72 bp CCGATGATGCTCATGTTCTCCACCGTCCGGCCGCCGTaGCGCAGCAGGCAGACGAGCGAGGCCACGGCGGAC +
Preference number: 6 (lower is better)
Translates to: PMMLMFSTVRPP*RSRQTSEATAD
Trigger: GTCCGCCGTGGCCTCGCTCGTCTGCCTGCTGCGCCACGGCGGCCGGACGGTGGAGAACATGAGCATCATCGG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000470861.1
ENST00000538402.1
CDS TCA 72 bp GCAGCAGGCAGACGAGCGAGGCCACGGCGGACACCGTaGAGCACAGCGCGCAGTACAGGGCGACCTTGGCGT +
Preference number: 6 (lower is better)
Translates to: AAGRRARPRRTP*STARSTGRPWR
Trigger: ACGCCAAGGTCGCCCTGTACTGCGCGCTGTGCTTCACGGTGTCCGCCGTGGCCTCGCTCGTCTGCCTGCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000470861.1
ENST00000538402.1
CDS GCA 72 bp TGGTGGTTGGAGACGATGACACAGGGACGGGCCTCCTaGAGCCTGCGCGGGTCCCGCACCTCGAAGCGGAGC +
Preference number: 6 (lower is better)
Translates to: WWLETMTQGRAS*SLRGSRTSKRS
Trigger: GCTCCGCTTCGAGGTGCGGGACCCGCGCAGGCTGCAGGAGGCCCGTCCCTGTGTCATCGTCTCCAACCACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000470861.1
ENST00000538402.1
CDS GCA 72 bp ACGGGCCCCAGGAAGAGCAGCTCCCGCTTGGCGATCTaGACGCAGCGCTCCGGAAGGACCTCCATGAGGCCC +
Preference number: 6 (lower is better)
Translates to: TGPRKSSSRLAI*TQRSGRTSMRP
Trigger: GGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCTTCCTGGGGCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS CAA 72 bp ATGAGGCCCACGGGCCCCAGGAAGAGCAGCTCCCGCTaGGCGATCTGCACGCAGCGCTCCGGAAGGACCTCC +
Preference number: 6 (lower is better)
Translates to: MRPTGPRKSSSR*AICTQRSGRTS
Trigger: GGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCTTCCTGGGGCCCGTGGGCCTCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000470861.1
ENST00000472820.1
ENST00000538402.1
CDS GCA 72 bp ACGGGCCCCAGGAAGAGCAGCTCCCGCTTGGCGATCTaGACGCAGCGCTCCGGAAGGACCTCCATGAGGCCT +
Preference number: 6 (lower is better)
Translates to: TGPRKSSSRLAI*TQRSGRTSMRP
Trigger: AGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCTTCCTGGGGCCCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS CAA 90 bp AGGTACATGATGAGGCCCACGGGCCCCAGGAAGAGCAGCTCCCGCTaGGCGATCTGCACGCAGCGCTCCGGAAGGACCTCCATGAGGCCC +
Preference number: 6 (lower is better)
Translates to: RYMMRPTGPRKSSSR*AICTQRSGRTSMRP
Trigger: GGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCTTCCTGGGGCCCGTGGGCCTCATCATGTACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS CCA 72 bp TTGGAGATGTGGAGGAAGGTGGTCCTCATGGCCCGGTaGCAGGTGTCCACGAGCGCAGGGACGTCCGCCGCA +
Preference number: 6 (lower is better)
Translates to: LEMWRKVVLMAR*QVSTSAGTSAA
Trigger: TGCGGCGGACGTCCCTGCGCTCGTGGACACCTGCCACCGGGCCATGAGGACCACCTTCCTCCACATCTCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000472820.1
ENST00000538402.1
CDS CAA 90 bp AGGTACATGATGAGGCCCACGGGCCCCAGGAAGAGCAGCTCCCGCTaGGCGATCTGCACGCAGCGCTCCGGAAGGACCTCCATGAGGCCT +
Preference number: 6 (lower is better)
Translates to: RYMMRPTGPRKSSSR*AICTQRSGRTSMRP
Trigger: AGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCAAGCGGGAGCTGCTCTTCCTGGGGCCCGTGGGCCTCATCATGTACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS CCA 72 bp CCGAGGCCCGGCCTACCCATCATGTCCAGGATGCTCTaGTGGTTGGAGACGATGACACAGGGACGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: PRPGLPIMSRML*WLETMTQGRAS
Trigger: GGAGGCCCGTCCCTGTGTCATCGTCTCCAACCACCAGAGCATCCTGGACATGATGGGTAGGCCGGGCCTCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470861.1
CDS CCA 72 bp CTGCACGCAGCGCTCCGGAAGGACCTCCATGAGGCCTaGGAGACAGAGAGACAGAGACAGAGAGAGAGGGGG +
Preference number: 6 (lower is better)
Translates to: LHAALRKDLHEA*ETERQRQRERG
Trigger: CCCCCTCTCTCTCTGTCTCTGTCTCTCTGTCTCCCAGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS CAA 90 bp CCCAGGTCGGCCATCACTGTCATGGCAGTGCTAGAGCGCTGCCGGTaGATGAAGAAGACGCCCCCGAGGTACATGATGAGGCCCACGGGC +
Preference number: 6 (lower is better)
Translates to: PRSAITVMAVLERCR*MKKTPPRYMMRPTG
Trigger: GCCCGTGGGCCTCATCATGTACCTCGGGGGCGTCTTCTTCATCAACCGGCAGCGCTCTAGCACTGCCATGACAGTGATGGCCGACCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000472820.1
ENST00000538402.1
CDS TCA 72 bp TGGCGATCTGCACGCAGCGCTCCGGAAGGACCTCCATaGGGCCTGGGAGACAGAGAGACAGAGACAGAGAGA +
Preference number: 6 (lower is better)
Translates to: WRSARSAPEGPP*GLGDRETETER
Trigger: TCTCTCTGTCTCTGTCTCTCTGTCTCCCAGGCCTCATGGAGGTCCTTCCGGAGCGCTGCGTGCAGATCGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS GCA 72 bp AGAGAGACAGAGACAGAGAGAGAGGGGGAGACAGCGTaGGCTGGAAGACAGCTGCTGAGCACCCACAGGCCT +
Preference number: 6 (lower is better)
Translates to: RETETEREGETA*AGRQLLSTHRP
Trigger: AGGCCTGTGGGTGCTCAGCAGCTGTCTTCCAGCGCACGCTGTCTCCCCCTCTCTCTCTGTCTCTGTCTCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000470861.1
ENST00000472820.1
CDS CCA 72 bp AGGACCTCCATGAGGCCCATCATGTCCAGGATGCTCTaGTGGTTGGAGACGATGACACAGGGACGGGCCTCC +
Preference number: 6 (lower is better)
Translates to: RTSMRPIMSRML*WLETMTQGRAS
Trigger: GGAGGCCCGTCCCTGTGTCATCGTCTCCAACCACCAGAGCATCCTGGACATGATGGGCCTCATGGAGGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000538402.1
CDS GCA 72 bp AGGTCGGCCATCACTGTCATGGCAGTGCTAGAGCGCTaGCGGTTGATGAAGAAGACGCCCCCGAGGTACATG +
Preference number: 6 (lower is better)
Translates to: RSAITVMAVLER*RLMKKTPPRYM
Trigger: CATGTACCTCGGGGGCGTCTTCTTCATCAACCGGCAGCGCTCTAGCACTGCCATGACAGTGATGGCCGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000472820.1
ENST00000538402.1
CDS CAA 72 bp GCCATCACTGTCATGGCAGTGCTAGAGCGCTGCCGGTaGATGAAGAAGACGCCCCCGAGGTACATGATGAGG +
Preference number: 6 (lower is better)
Translates to: AITVMAVLERCR*MKKTPPRYMMR
Trigger: CCTCATCATGTACCTCGGGGGCGTCTTCTTCATCAACCGGCAGCGCTCTAGCACTGCCATGACAGTGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371694.7
ENST00000371696.7
ENST00000472820.1
ENST00000538402.1