RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGO4 (Homo sapiens)

Ensembl gene IDs: ENSG00000134698

Ensembl transcript IDs: ENST00000373210.4, ENST00000496257.1

Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCTTCTTCTGTGCGTTATTAATAAGCAAGCCCGAGGCACTCAAGTaGAGGTGTGGTGCCCGCTGGCCAGCCAGCCAGTCACCAAGAGTT +
Preference number: 1 (lower is better)
Translates to: CFFCALLISKPEALK*RCGARWPASQSPRV
Trigger: AACTCTTGGTGACTGGCTGGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAATAACGCACAGAAGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 90 bp CTGTGCGTTATTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTaGTGCCCGCTGGCCAGCCAGCCAGTCACCAAGAGTTCTTCACAT +
Preference number: 1 (lower is better)
Translates to: LCVINKQARGTQVQV*CPLASQPVTKSSSH
Trigger: ATGTGAAGAACTCTTGGTGACTGGCTGGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAATAACGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 90 bp GACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAGGCATTTaGAACATTTTGAGGCTGCATGGGGTGCCAAATTGGTTGAGTTCT +
Preference number: 1 (lower is better)
Translates to: DHLKSTWLDLEAVGI*NILRLHGVPNWLSS
Trigger: AGAACTCAACCAATTTGGCACCCCATGCAGCCTCAAAATGTTTCAAATGCCTACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 90 bp ATAGCCTTGCTCCCTGCTCCATACATGCCAGGAGATGGTGAGAAGTaGTGCTTCTTCTGTGCGTTATTAATAAGCAAGCCCGAGGCACTC +
Preference number: 1 (lower is better)
Translates to: IALLPAPYMPGDGEK*CFFCALLISKPEAL
Trigger: GAGTGCCTCGGGCTTGCTTATTAATAACGCACAGAAGAAGCATCACTTCTCACCATCTCCTGGCATGTATGGAGCAGGGAGCAAGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 90 bp CGGGAACATAGCCTTGCTCCCTGCTCCATACATGCCAGGAGATGGTaGGAAGTGATGCTTCTTCTGTGCGTTATTAATAAGCAAGCCCGA +
Preference number: 1 (lower is better)
Translates to: REHSLAPCSIHARRW*EVMLLLCVINKQAR
Trigger: TCGGGCTTGCTTATTAATAACGCACAGAAGAAGCATCACTTCTCACCATCTCCTGGCATGTATGGAGCAGGGAGCAAGGCTATGTTCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 90 bp GCTGGGATTTTGAGAAGGCTAGTTTATGAGATTTGGACCGTCTCATaGGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGT +
Preference number: 1 (lower is better)
Translates to: AGILRRLVYEIWTVS*VQANTLHHHFPTSS
Trigger: ACTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTCCAAATCTCATAAACTAGCCTTCTCAAAATCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 90 bp ACAGAACTTGCTTTCATCCCACTATCTGCAGGGATTAAGGACGTCTaGACTCAGCTTAATGAGCAACAGGCCTCGATCGACATAAAACTC +
Preference number: 1 (lower is better)
Translates to: TELAFIPLSAGIKDV*TQLNEQQASIDIKL
Trigger: GAGTTTTATGTCGATCGAGGCCTGTTGCTCATTAAGCTGAGTGCAGACGTCCTTAATCCCTGCAGATAGTGGGATGAAAGCAAGTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 90 bp CTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACTCTaGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACT +
Preference number: 1 (lower is better)
Translates to: LTPDVLDRELQVSKL*AGKHWLVLPRHYVT
Trigger: AGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 90 bp AAACAGCCTAAAACTACTTCTAGAGAATGCACACCTCCCATTGATTaGCACATGCATAACGATTCAGTCAGTCCCGAGGGGGTTACCTAT +
Preference number: 1 (lower is better)
Translates to: KQPKTTSRECTPPID*HMHNDSVSPEGVTY
Trigger: ATAGGTAACCCCCTCGGGACTGACTGAATCGTTATGCATGTGTCAATCAATGGGAGGTGTGCATTCTCTAGAAGTAGTTTTAGGCTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 90 bp CCCTACATTTTAACTGATGCTCGCTTTAGAGCAACTCCCTTTGTTTaGACAAGAAAGGAATCCCATCTCCCTGTGAGTGGAATCCAGAAT +
Preference number: 1 (lower is better)
Translates to: PYILTDARFRATPFV*TRKESHLPVSGIQN
Trigger: ATTCTGGATTCCACTCACAGGGAGATGGGATTCCTTTCTTGTCCAAACAAAGGGAGTTGCTCTAAAGCGAGCATCAGTTAAAATGTAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 90 bp CTGGATAGAGAATTACAAGTCAGTAAACTCTGGGCTGGGAAACACTaGCTGGTGCTACCAAGACACTATGTAACTGTTGTCCATTCACAA +
Preference number: 1 (lower is better)
Translates to: LDRELQVSKLWAGKH*LVLPRHYVTVVHSQ
Trigger: TTGTGAATGGACAACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTTACTGACTTGTAATTCTCTATCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 90 bp AAAACTCTCTCAGAGACCAGTCTCAGCAAACACAGGTGGCGCCGTTaGTCAACAGCACATGGAAATGTAAACTTCAATGTATTTACAAGT +
Preference number: 1 (lower is better)
Translates to: KTLSETSLSKHRWRR*STAHGNVNFNVFTS
Trigger: ACTTGTAAATACATTGAAGTTTACATTTCCATGTGCTGTTGATCAACGGCGCCACCTGTGTTTGCTGAGACTGGTCTCTGAGAGAGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 90 bp CTAAAACTACTTCTAGAGAATGCACACCTCCCATTGATTGACACATaGATAACGATTCAGTCAGTCCCGAGGGGGTTACCTATTCAAATT +
Preference number: 1 (lower is better)
Translates to: LKLLLENAHLPLIDT*ITIQSVPRGLPIQI
Trigger: AATTTGAATAGGTAACCCCCTCGGGACTGACTGAATCGTTATGCATGTGTCAATCAATGGGAGGTGTGCATTCTCTAGAAGTAGTTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 90 bp AAAAACAGTGCTTTATATTGCTGGGATTTTGAGAAGGCTAGTTTATaGGATTTGGACCGTCTCATGAGTTCAAGCAAACACCCTTCACCA +
Preference number: 1 (lower is better)
Translates to: KNSALYCWDFEKASL*DLDRLMSSSKHPSP
Trigger: TGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTCCAAATCTCATAAACTAGCCTTCTCAAAATCCCAGCAATATAAAGCACTGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 90 bp AACTCCCTTTGTTTGGACAAGAAAGGAATCCCATCTCCCTGTGAGTaGAATCCAGAATCTATTAAGAAAAATCAACCTTTTCCACACAGT +
Preference number: 1 (lower is better)
Translates to: NSLCLDKKGIPSPCE*NPESIKKNQPFPHS
Trigger: ACTGTGTGGAAAAGGTTGATTTTTCTTAATAGATTCTGGATTCCACTCACAGGGAGATGGGATTCCTTTCTTGTCCAAACAAAGGGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 90 bp GGAAACATGAGTACTTTTATCATGGCAGTGTTATCTCCGTCACTGTaGCATGCATTACATCTGTTTATGTCACACATTCACAAAAGTCGA +
Preference number: 1 (lower is better)
Translates to: GNMSTFIMAVLSPSL*HALHLFMSHIHKSR
Trigger: TCGACTTTTGTGAATGTGTGACATAAACAGATGTAATGCATGTCACAGTGACGGAGATAACACTGCCATGATAAAAGTACTCATGTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 90 bp CATGAGTACTTTTATCATGGCAGTGTTATCTCCGTCACTGTGACATaGATTACATCTGTTTATGTCACACATTCACAAAAGTCGACCAAA +
Preference number: 1 (lower is better)
Translates to: HEYFYHGSVISVTVT*ITSVYVTHSQKSTK
Trigger: TTTGGTCGACTTTTGTGAATGTGTGACATAAACAGATGTAATGCATGTCACAGTGACGGAGATAACACTGCCATGATAAAAGTACTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 90 bp CGAATTAAAGTAAAACTATGCATTCAGACTTGCTTGCAATCATATTaGTGCAACTCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCC +
Preference number: 1 (lower is better)
Translates to: RIKVKLCIQTCLQSY*CNSDSAVISSKDSP
Trigger: GGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGAGTTGCAGCAATATGATTGCAAGCAAGTCTGAATGCATAGTTTTACTTTAATTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 90 bp TTCAAATTGTCAAGCCGAATTAAAGTAAAACTATGCATTCAGACTTaGTTGCAATCATATTGCTGCAACTCTGATTCTGCAGTGATTAGC +
Preference number: 1 (lower is better)
Translates to: FKLSSRIKVKLCIQT*LQSYCCNSDSAVIS
Trigger: GCTAATCACTGCAGAATCAGAGTTGCAGCAATATGATTGCAAGCAAGTCTGAATGCATAGTTTTACTTTAATTCGGCTTGACAATTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCACTAGAGGGATGCGGTaGACACCACAGCTAGCAAAA +
Preference number: 2 (lower is better)
Translates to: LISKPEALKCRCGARWPATRGMR*TPQLAK
Trigger: TTTTGCTAGCTGTGGTGTTCACCGCATCCCTCTAGT...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCCTGCAAGTAGTCGTGTaGGTTACCTTGATTCCCAGG +
Preference number: 2 (lower is better)
Translates to: LISKPEALKCRCGARWPALQVVV*VTLIPR
Trigger: CCTGGGAATCAAGGTAACTCACACGACTACTTGCAG...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCATGGCTCAATTTTGTTaGCGCATCAGACAGTGCTGC +
Preference number: 2 (lower is better)
Translates to: LISKPEALKCRCGARWPAMAQFC*RIRQCC
Trigger: GCAGCACTGTCTGATGCGTCAACAAAATTGAGCCAT...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR GCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGCTGTCAGCATGTACTTaGACCAGCACAAGTCTGCAG +
Preference number: 2 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQLSACT*TSTSLQ
Trigger: CTGCAGACTTGTGCTGGTGCAAGTACATGCTGACAG...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR GCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCTCATTTTACAGAACTTaGTTTCATCCCACTATCTGC +
Preference number: 2 (lower is better)
Translates to: LISKPEALKCRCGARWPASFYRT*FHPTIC
Trigger: GCAGATAGTGGGATGAAAGCAAGTTCTGTAAAATGA...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGAATCCCATCTCCCTGTaGGTGGAATCCAGAATCTAT +
Preference number: 2 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQNPISL*VESRIY
Trigger: ATAGATTCTGGATTCCACTCACAGGGAGATGGGATT...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 90 bp ATTTACCCCAGTGTACCAGGACTGACTGAGGTCTTACAAGCTGTATaGTTCGAGGTCGAGCGTAGAGCAAGACAAGCTAATCAGGGCTTT +
Preference number: 2 (lower is better)
Translates to: IYPSVPGLTEVLQAV*FEVERRARQANQGF
Trigger: AAAGCCCTGATTAGCTTGTCTTGCTCTACGCTCGACCTCGAACAATACAGCTTGTAAGACCTCAGTCAGTCCTGGTACACTGGGGTAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCACCAGAGTGGCCATGCTaGAGGGTATTCTCTGTGCTC +
Preference number: 2 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPPEWPC*RVFSVL
Trigger: GAGCACAGAGAATACCCTTCAGCATGGCCACTCTGG...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTATGGGCTGGGAAACACTaGCTGGTGCTACCAAGACAC +
Preference number: 2 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALWAGKH*LVLPRH
Trigger: GTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCA...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTTCAGCCTTTGCACATTaGGGTAAAAATTCAGTCCAG +
Preference number: 2 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVSAFAH*GKNSVQ
Trigger: CTGGACTGAATTTTTACCTCAATGTGCAAAGGCTGA...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCACAAGTCAGTAAACTCTaGGCTGGGAAACACTGGCTG +
Preference number: 2 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPQVSKL*AGKHWL
Trigger: CAGCCAGTGTTTCCCAGCCCAGAGTTTACTGACTTG...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 90 bp AAACCAAACAGCCTAAAACTACTTCTAGAGAATGCACACCTCCCATaGATTGACACATGCATAACGATTCAGTCAGTCCCGAGGGGGTTA +
Preference number: 2 (lower is better)
Translates to: KPNSLKLLLENAHLP*IDTCITIQSVPRGL
Trigger: TAACCCCCTCGGGACTGACTGAATCGTTATGCATGTGTCAATCAATGGGAGGTGTGCATTCTCTAGAAGTAGTTTTAGGCTGTTTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACGAGGCGGTAGGCATTTaGAACATTTTGAGGCTGCAT +
Preference number: 2 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNEAVGI*NILRLH
Trigger: ATGCAGCCTCAAAATGTTTCAAATGCCTACCGCCTC...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACACTGGGAAACACTGGCTaGTGCTACCAAGACACTATG +
Preference number: 2 (lower is better)
Translates to: EINICHLFTPGYVVLHFTLGNTG*CYQDTM
Trigger: CATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAG...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTAGGGTGCCAAATTGGTTaGGTTCTTTTTCTGAGACTC +
Preference number: 2 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALGCQIG*VLFLRL
Trigger: GAGTCTCAGAAAAAGAACTCAACCAATTTGGCACCC...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTATGTACCAGGACTGACTaGGGTCTTACAAGCTGTATT +
Preference number: 2 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALCTRTD*GLTSCI
Trigger: AATACAGCTTGTAAGACCTCAGTCAGTCCTGGTACA...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACTCGTGTGAGTTACCTTaGTTCCCAGGAAAAGAAATT +
Preference number: 2 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNSCELP*FPGKEI
Trigger: AATTTCTTTTCCTGGGAATCAAGGTAACTCACACGA...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR GCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAGGGATTAAGGACGTCTaGACTCAGCTTAATGAGCAA +
Preference number: 2 (lower is better)
Translates to: EINICHLFTPGYVVLHFTGIKDV*TQLNEQ
Trigger: TTGCTCATTAAGCTGAGTGCAGACGTCCTTAATCCC...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTACATGGGGTGCCAAATTaGTTGAGTTCTTTTTCTGAG +
Preference number: 2 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALHGVPN*LSSFSE
Trigger: CTCAGAAAAAGAACTCAACCAATTTGGCACCCCATG...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACTTGTACCTTAAGGACTaGCAAAGCCTTTCCAATAAG +
Preference number: 2 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNLYLKD*QSLSNK
Trigger: CTTATTGGAAAGGCTTTGCCAGTCCTTAAGGTACAA...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 90 bp AGAAATTTTAAATGCTGGTACATTTGCAAGTTGCAGCATCACTCATaGTACCTTAAGGACTGGCAAAGCCTTTCCAATAAGGAAGCATCC +
Preference number: 2 (lower is better)
Translates to: RNFKCWYICKLQHHS*YLKDWQSLSNKEAS
Trigger: GGATGCTTCCTTATTGGAAAGGCTTTGCCAGTCCTTAAGGTACAATGAGTGATGCTGCAACTTGCAAATGTACCAGCATTTAAAATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR TCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAATTATCTCCGTCACTGTaGCATGCATTACATCTGTTT +
Preference number: 2 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKLSPSL*HALHLF
Trigger: AAACAGATGTAATGCATGTCACAGTGACGGAGATAA...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 90 bp ATGTCACACATTCACAAAAGTCGACCAAATAAGAGAACTGCCTATTaGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTA +
Preference number: 2 (lower is better)
Translates to: MSHIHKSRPNKRTAY*NLQPNIVQIACQHV
Trigger: TACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCAGTTCTCTTATTTGGTCGACTTTTGTGAATGTGTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAAGTGCTTTATATTGCTaGGATTTTGAGAAGGCTAGT +
Preference number: 2 (lower is better)
Translates to: EINICHLFTPGYVVLHFTSALYC*DFEKAS
Trigger: ACTAGCCTTCTCAAAATCCCAGCAATATAAAGCACT...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 90 bp AAATTGTCAAGCCGAATTAAAGTAAAACTATGCATTCAGACTTGCTaGCAATCATATTGCTGCAACTCTGATTCTGCAGTGATTAGCTCT +
Preference number: 2 (lower is better)
Translates to: KLSSRIKVKLCIQTC*QSYCCNSDSAVISS
Trigger: AGAGCTAATCACTGCAGAATCAGAGTTGCAGCAATATGATTGCAAGCAAGTCTGAATGCATAGTTTTACTTTAATTCGGCTTGACAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 90 bp ACCATGTATGTTGCCATTACAGTGTACTGCATACTTATTAGACAATaGACAGGAAAAACAACTTTTGGCACAAGAATGCCAATTTATTCC +
Preference number: 2 (lower is better)
Translates to: TMYVAITVYCILIRQ*TGKTTFGTRMPIYS
Trigger: GGAATAAATTGGCATTCTTGTGCCAAAAGTTGTTTTTCCTGTCAATTGTCTAATAAGTATGCAGTACACTGTAATGGCAACATACATGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 72 bp TGTGCGTTATTAATAAGCAAGCCCGAGGCACTCAAGTaGAGGTGTGGTGCCCGCTGGCCAGCCAGCCAGTCA +
Preference number: 3 (lower is better)
Translates to: CALLISKPEALK*RCGARWPASQS
Trigger: TGACTGGCTGGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAATAACGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 72 bp ATTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTaGTGCCCGCTGGCCAGCCAGCCAGTCACCAAGAGT +
Preference number: 3 (lower is better)
Translates to: INKQARGTQVQV*CPLASQPVTKS
Trigger: ACTCTTGGTGACTGGCTGGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CAA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCTTAGAGCAACTCCCTTaGTTTGGACAAGAAAGGAAT +
Preference number: 3 (lower is better)
Translates to: LISKPEALKCRCGARWPALEQLP*FGQERN
Trigger: ATTCCTTTCTTGTCCAAACAAAGGGAGTTGCTCTAA...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp CACCACACTGATTTACCCCAGTGTACCAGGACTGACTaGGGTCTTACAAGCTGTATTGTTCGAGGTCGAGCG +
Preference number: 3 (lower is better)
Translates to: HHTDLPQCTRTD*GLTSCIVRGRA
Trigger: CGCTCGACCTCGAACAATACAGCTTGTAAGACCTCAGTCAGTCCTGGTACACTGGGGTAAATCAGTGTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 72 bp GCTTTCATCCCACTATCTGCAGGGATTAAGGACGTCTaGACTCAGCTTAATGAGCAACAGGCCTCGATCGAC +
Preference number: 3 (lower is better)
Translates to: AFIPLSAGIKDV*TQLNEQQASID
Trigger: GTCGATCGAGGCCTGTTGCTCATTAAGCTGAGTGCAGACGTCCTTAATCCCTGCAGATAGTGGGATGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CAA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTCCTGTCAGCATGTACTaGCACCAGCACAAGTCTGCA +
Preference number: 3 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVPVSMY*HQHKSA
Trigger: TGCAGACTTGTGCTGGTGCAAGTACATGCTGACAGG...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp AAGTCAACGTGGCTCGATCTAGAGGCGGTAGGCATTTaGAACATTTTGAGGCTGCATGGGGTGCCAAATTGG +
Preference number: 3 (lower is better)
Translates to: KSTWLDLEAVGI*NILRLHGVPNW
Trigger: CCAATTTGGCACCCCATGCAGCCTCAAAATGTTTCAAATGCCTACCGCCTCTAGATCGAGCCACGTTGACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CAA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGGGGGTGCCAAATTGGTaGAGTTCTTTTTCTGAGACT +
Preference number: 3 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQGVPNW*SSFSET
Trigger: AGTCTCAGAAAAAGAACTCAACCAATTTGGCACCCC...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp CTCCCTGCTCCATACATGCCAGGAGATGGTGAGAAGTaGTGCTTCTTCTGTGCGTTATTAATAAGCAAGCCC +
Preference number: 3 (lower is better)
Translates to: LPAPYMPGDGEK*CFFCALLISKP
Trigger: GGGCTTGCTTATTAATAACGCACAGAAGAAGCATCACTTCTCACCATCTCCTGGCATGTATGGAGCAGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp TCAGAGACCAGTCTCAGCAAACACAGGTGGCGCCGTTaGTCAACAGCACATGGAAATGTAAACTTCAATGTA +
Preference number: 3 (lower is better)
Translates to: SETSLSKHRWRR*STAHGNVNFNV
Trigger: TACATTGAAGTTTACATTTCCATGTGCTGTTGATCAACGGCGCCACCTGTGTTTGCTGAGACTGGTCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp AAAACTACTTCTAGAGAATGCACACCTCCCATTGATTaGCACATGCATAACGATTCAGTCAGTCCCGAGGGG +
Preference number: 3 (lower is better)
Translates to: KTTSRECTPPID*HMHNDSVSPEG
Trigger: CCCCTCGGGACTGACTGAATCGTTATGCATGTGTCAATCAATGGGAGGTGTGCATTCTCTAGAAGTAGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 72 bp TGCAAGTTGCAGCATCACTCATTGTACCTTAAGGACTaGCAAAGCCTTTCCAATAAGGAAGCATCCTGGTTC +
Preference number: 3 (lower is better)
Translates to: CKLQHHSLYLKD*QSLSNKEASWF
Trigger: GAACCAGGATGCTTCCTTATTGGAAAGGCTTTGCCAGTCCTTAAGGTACAATGAGTGATGCTGCAACTTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 72 bp GAATTACAAGTCAGTAAACTCTGGGCTGGGAAACACTaGCTGGTGCTACCAAGACACTATGTAACTGTTGTC +
Preference number: 3 (lower is better)
Translates to: ELQVSKLWAGKH*LVLPRHYVTVV
Trigger: GACAACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTTACTGACTTGTAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp TTGAGAAGGCTAGTTTATGAGATTTGGACCGTCTCATaGGTTCAAGCAAACACCCTTCACCATCATTTCCCC +
Preference number: 3 (lower is better)
Translates to: LRRLVYEIWTVS*VQANTLHHHFP
Trigger: GGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTCCAAATCTCATAAACTAGCCTTCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp CATTCACAAAAGGTCGTTAGGACAGGGTGGAGAGGGTaGGCCTTGTTAAACAGTGGATTATATTTTCCCACT +
Preference number: 3 (lower is better)
Translates to: HSQKVVRTGWRG*ALLNSGLYFPT
Trigger: AGTGGGAAAATATAATCCACTGTTTAACAAGGCTCACCCTCTCCACCCTGTCCTAACGACCTTTTGTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 72 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTaGCTGTCAGCATGTACTTGCACCAGCACAAGTCTG +
Preference number: 3 (lower is better)
Translates to: CLFESAAKYSAN*LSACTCTSTSL
Trigger: CAGACTTGTGCTGGTGCAAGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CAA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTAAATGGCTCAATTTTGTaGACGCATCAGACAGTGCTG +
Preference number: 3 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALNGSIL*THQTVL
Trigger: CAGCACTGTCTGATGCGTCAACAAAATTGAGCCATT...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp GCTTGCAATCATATTGCTGCAACTCTGATTCTGCAGTaGTTAGCTCTAAAGATTCACCCCTCAGCAAGTTTT +
Preference number: 3 (lower is better)
Translates to: ACNHIAATLILQ*LALKIHPSASF
Trigger: AAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGAGTTGCAGCAATATGATTGCAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CAA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAAAAAATGGCTCAATTTaGTTGACGCATCAGACAGTG +
Preference number: 3 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPKNGSI*LTHQTV
Trigger: CACTGTCTGATGCGTCAACAAAATTGAGCCATTTTT...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CAA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAATCACTCCTGGCTATGTaGTGCTTCATTTTACAGAAC +
Preference number: 3 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKSLLAM*CFILQN
Trigger: GTTCTGTAAAATGAAGCACAACATAGCCAGGAGTGA...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CAA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACACAGGCTGATCAGCCTTaGCACATTGAGGTAAAAATT +
Preference number: 3 (lower is better)
Translates to: EINICHLFTPGYVVLHFTQADQP*HIEVKI
Trigger: AATTTTTACCTCAATGTGCAAAGGCTGATCAGCCTG...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR-3UTR CAA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAATTGTTTTCACCCCATaGTGTCTATCTCTTTCCCTA +
Preference number: 3 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKIVFTP*CLSLSL
Trigger: TAGGGAAAGAGATAGACACAATGGGGTGAAAACAAT...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp AGTACTTTTATCATGGCAGTGTTATCTCCGTCACTGTaGCATGCATTACATCTGTTTATGTCACACATTCAC +
Preference number: 3 (lower is better)
Translates to: STFIMAVLSPSL*HALHLFMSHIH
Trigger: GTGAATGTGTGACATAAACAGATGTAATGCATGTCACAGTGACGGAGATAACACTGCCATGATAAAAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CCA 72 bp CAGCAAACACAGGTGGCGCCGTTGATCAACAGCACATaGAAATGTAAACTTCAATGTATTTACAAGTTTATT +
Preference number: 3 (lower is better)
Translates to: QQTQVAPLINST*KCKLQCIYKFI
Trigger: AATAAACTTGTAAATACATTGAAGTTTACATTTCCATGTGCTGTTGATCAACGGCGCCACCTGTGTTTGCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 72 bp GTAAAACTATGCATTCAGACTTGCTTGCAATCATATTaGTGCAACTCTGATTCTGCAGTGATTAGCTCTAAA +
Preference number: 3 (lower is better)
Translates to: VKLCIQTCLQSY*CNSDSAVISSK
Trigger: TTTAGAGCTAATCACTGCAGAATCAGAGTTGCAGCAATATGATTGCAAGCAAGTCTGAATGCATAGTTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR GCA 72 bp TCAAGCCGAATTAAAGTAAAACTATGCATTCAGACTTaGTTGCAATCATATTGCTGCAACTCTGATTCTGCA +
Preference number: 3 (lower is better)
Translates to: SSRIKVKLCIQT*LQSYCCNSDSA
Trigger: TGCAGAATCAGAGTTGCAGCAATATGATTGCAAGCAAGTCTGAATGCATAGTTTTACTTTAATTCGGCTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR TCA 72 bp TTGCAAAATTTAAACGACCATCATCTTATCTCAACATaGGGATACAACCCCTCCCTTAATAGTTTAGAAAGT +
Preference number: 3 (lower is better)
Translates to: LQNLNDHHLIST*GYNPSLNSLES
Trigger: ACTTTCTAAACTATTAAGGGAGGGGTTGTATCCTCATGTTGAGATAAGATGATGGTCGTTTAAATTTTGCAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCCCGCCGCGTAACGCTTaGTCTCCGGAATATTGGCGC +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPAPPRNA*SPEYWR
Trigger: GCGCCAATATTCCGGAGATCAAGCGTTACGCGGCGG...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAGCCTTAGCCAAGGCCTaGGGATCCCGGCCGTTGCTC +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVALAKA*GSRPLL
Trigger: GAGCAACGGCCGGGATCCTCAGGCCTTGGCTAAGGC...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCGCACCGTCCACCTCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPAAPSTS*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGAGGTGGACGGTGC...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCCTACTACCTCCCTGTTaGCTCTACGAGGCCGTTTTT +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPALLPPC*LYEAVF
Trigger: AAAAACGGCCTCGTAGAGTCAACAGGGAGGTAGTAG...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCAGGCTCCACACTGTCTaGACCTTGTGCATACTTGCA +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPARLHTV*TLCILA
Trigger: TGCAAGTATGCACAAGGTGCAGACAGTGTGGAGCCT...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAAGGAAGATGACAGGCTaGTGGAACACCGAGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVRKMTG*WNTEGL
Trigger: AAGGCCCTCGGTGTTCCAGCAGCCTGTCATCTTCCT...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCAGCTCTGATAGAGGCTaGGCACCAGATCCTAAAACA +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPASSDRG*APDPKT
Trigger: TGTTTTAGGATCTGGTGCCCAGCCTCTATCAGAGCT...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGAAAGGAACGGCCCACTaGGGTGTACCTCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQKGTAH*GVPHGG
Trigger: CCCTCCATGAGGTACACCCCAGTGGGCCGTTCCTTT...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCTCTTCAGGCAAAGATTaGAAAGGGTTTGAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPASSGKD*KGFEVR
Trigger: CCTCACCTCAAACCCTTTCCAATCTTTGCCTGAAGA...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTACACCTGAAGTCAACGTaGCTCGATCTAGAGGCGGTA +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVHLKST*LDLEAV
Trigger: TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTG...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAGTCCTGACACATGACTaGCTTCCGCACTGTCATGAT +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVVLTHD*LPHCHD
Trigger: ATCATGACAGTGCGGAAGGCAGTCATGTGTCAGGAC...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCGCAAAATACATCGTGTaGTGGGTATCATGGTGGATT +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPAAKYIV*WVSWWI
Trigger: AATCCACCATGATACCCAGCACACGATGTATTTTGC...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCGACACTTTAAATGTTTaGTCTTTACCCTCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPADTLNV*SLPSPG
Trigger: TCCAGGCGAGGGTAAAGACCAAACATTTAAAGTGTC...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTATGCTGGGTATCATGGTaGATTTGCACAGCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVCWVSW*ICTALA
Trigger: GGCTAAGGCTGTGCAAATCCACCATGATACCCAGCA...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 72 bp CAAGACAAGCTAATCAGGGCTTTCGGGAACATAGCCTaGCTCCCTGCTCCATACATGCCAGGAGATGGTGAG +
Preference number: 4 (lower is better)
Translates to: QDKLIRAFGNIA*LPAPYMPGDGE
Trigger: CTCACCATCTCCTGGCATGTATGGAGCAGGGAGCAAGGCTATGTTCCCGAAAGCCCTGATTAGCTTGTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCTTATCTCCGTCACTGTaGCATGCATTACATCTGTTT +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPALSPSL*HALHLF
Trigger: AAACAGATGTAATGCATGTCACAGTGACGGAGATAA...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGCACAGGTGGCGCCGTTaGTCAACAGCACATGGAAAT +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQHRWRR*STAHGN
Trigger: ATTTCCATGTGCTGTTGATCAACGGCGCCACCTGTG...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAGGAGATGGTGAGAAGTaGTGCTTCTTCTGTGCGTTA +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVGDGEK*CFFCAL
Trigger: TAACGCACAGAAGAAGCATCACTTCTCACCATCTCC...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGCCAGTGTACCAGGACTaGCTGAGGTCTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQPVYQD*LRSYKL
Trigger: CAGCTTGTAAGACCTCAGTCAGTCCTGGTACACTGG...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCAAATGCTGGTACATTTaGAAGTTGCAGCATCACTCA +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPAKCWYI*KLQHHS
Trigger: TGAGTGATGCTGCAACTTGCAAATGTACCAGCATTT...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCCCATTGATTGACACATaGATAACGATTCAGTCAGTC +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPAPLIDT*ITIQSV
Trigger: GACTGACTGAATCGTTATGCATGTGTCAATCAATGG...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGGCCCAGAACGCTGGCTaGATTAAGCCAGCTAGTTCA +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQAQNAG*IKPASS
Trigger: TGAACTAGCTGGCTTAATGCAGCCAGCGTTCTGGGC...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCAAATTCTTTAAGGTATaGATCAGGTCCACCCACCAT +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPAKFFKV*IRSTHH
Trigger: ATGGTGGGTGGACCTGATCCATACCTTAAAGAATTT...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCTGGGGGTATTTCAGTTaGAGACTATACTTTTGCTTA +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPAWGYFS*RLYFCL
Trigger: TAAGCAAAAGTATAGTCTGCAACTGAAATACCCCCA...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAATCCACTGTAGTGCCTaGTGGTACATTGCCACTTTT +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVIHCSA*WYIATF
Trigger: AAAAGTGGCAATGTACCAGCAGGCACTACAGTGGAT...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTACCCGAGGCACTCAAGTaGAGGTGTGGTGCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALPEALK*RCGARW
Trigger: CCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGG...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAGCCAGGACGACGAGGTaGCTGAAACAGGCTAGCCGG +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPARTTR*LKQASR
Trigger: CCGGCTAGCCTGTTTCAGCCACCTCGTCGTCCTGGC...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCGAACCTGAAAATGATTaGCTAACAGTCGAATTGGTT +
Preference number: 4 (lower is better)
Translates to: LISKPEALKCRCGARWPAEPEND*LTVELV
Trigger: AACCAATTCGACTGTTAGCCAATCATTTTCAGGTTC...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGGTCTTTACCCTCGCCTaGAAGAGTCACCTCCATATC +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQVFTLA*KSHLHI
Trigger: GATATGGAGGTGACTCTTCCAGGCGAGGGTAAAGAC...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGCACCTCCGCATATACTaGTGTCTTTCCAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQHLRIY*CLSRQD
Trigger: ATCCTGCCTGGAAAGACACCAGTATATGCGGAGGTG...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACACTCAAGTGCAGGTGTaGTGCCCGCTGGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNTQVQV*CPLASQ
Trigger: CTGGCTGGCCAGCGGGCACCACACCTGCACTTGAGT...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGGCTTCTAAAAGCAACTaGAGGCTCACAACTGACACC +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQASKSN*RLTTDT
Trigger: GGTGTCAGTTGTGAGCCTTCAGTTGCTTTTAGAAGC...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGATATTGCAGCATTGGTaGTGGAAGTACCCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQILQHW*WKYPAC
Trigger: ACAGGCAGGGTACTTCCAGCACCAATGCTGCAATAT...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAGTAAATTTGACACGCTaGGAGTCTGTTAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVVNLTR*ESVRGL
Trigger: CAAACCTCTAACAGACTCCCAGCGTGTCAAATTTAC...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTACCATCTCTTCACTCCTaGCTATGTTGTGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVPSLHS*LCCASF
Trigger: AAATGAAGCACAACATAGCCAGGAGTGAAGAGATGG...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAGGACGACGAGGTGGCTaGAACAGGCTAGCCGGAGGT +
Preference number: 4 (lower is better)
Translates to: EINICHLFTPGYVVLHFTGRRGG*NRLAGG
Trigger: ACCTCCGGCTAGCCTGTTTCAGCCACCTCGTCGTCC...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGCAAGACCTGGTAATGTaGGGGACGGCTGGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRQDLVM*GTAGSL
Trigger: CAGGGAACCAGCCGTCCCTCACATTACCAGGTCTTG...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTGCCGTTGCTCTGTCCTaGCACATGACTGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTAVALS*HMTAFR
Trigger: GCGGAAGGCAGTCATGTGTCAGGACAGAGCAACGGC...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTAAGCCGGGCATAATATaGAGGGGCTGGAATAGAGAC +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVKPGII*RGWNRD
Trigger: GTCTCTATTCCAGCCCCTGCATATTATGCCCGGCTT...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACGAGGATCCCGGCCGTTaGTCTGTCCTGACACATGAC +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNEDPGR*SVLTHD
Trigger: GTCATGTGTCAGGACAGAGCAACGGCCGGGATCCTC...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAGTAACCTTCCGGGGGTaGGAAAAAGGAACGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKVTFRG*EKGTAH
Trigger: GTGGGCCGTTCCTTTTTCTCACCCCCGGAAGGTTAC...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTGAGGCGGTAGGCATTTaGAACATTTTGAGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVEAVGI*NILRLH
Trigger: ATGCAGCCTCAAAATGTTTCAAATGCCTACCGCCTC...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTATCCTTTTGTCCAAAATaGCAGCATTGCACCTTTAAT +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVSFCPK*QHCTFN
Trigger: ATTAAAGGTGCAATGCTGTCATTTTGGACAAAAGGA...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAATCTTGGGAGATCTCCTaGCGGGAAGTCTGCACCCGA +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKSWEIS*REVCTR
Trigger: TCGGGTGCAGACTTCCCGGCAGGAGATCTCCCAAGA...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTTGCCTGCTGGTACATTaGCACTTTTCCCTACCCTTT +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVCLLVH*HFSLPF
Trigger: AAAGGGTAGGGAAAAGTGGCAATGTACCAGCAGGCA...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAAAAGTCAAACTCAGATaGATGTGTGATGGTACTATC +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVKVKLR*MCDGTI
Trigger: GATAGTACCATCACACATCCATCTGAGTTTGACTTT...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACTGGGCTGGGAAACACTaGCTGGTGCTACCAAGACAC +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNWAGKH*LVLPRH
Trigger: GTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCA...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAAATTGGTTCAACATTTaGGTCATCACCACTCTCTTA +
Preference number: 4 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVNWFNI*VITTLL
Trigger: TAAGAGAGTGGTGATGACCCAAATGTTGAACCAATT...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAGGCTGGAATAGAGACTaGGCGAGTGCACCTCACATA +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPGWNRD*ASAPHI
Trigger: TATGTGAGGTGCACTCGCTCAGTCTCTATTCCAGCC...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTCTCTGTCCTGACACATaGCTGCCTTCCGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTLCPDT*LPSALS
Trigger: TGACAGTGCGGAAGGCAGTCATGTGTCAGGACAGAG...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGTCGTGTGAGTTACCTTaGTTCCCAGGAAAAGAAATT +
Preference number: 4 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQSCELP*FPGKEI
Trigger: AATTTCTTTTCCTGGGAATCAAGGTAACTCACACGA...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTATTTGGACCGTCTCATaGGTTCAAGCAAACACCCTT +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVIWTVS*VQANTL
Trigger: AAGGGTGTTTGCTTGAACTCATGAGACGGTCCAAAT...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAACCAGAGTGGCCATGCTaGAGGGTATTCTCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKPEWPC*RVFSVL
Trigger: GAGCACAGAGAATACCCTTCAGCATGGCCACTCTGG...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGCTTCCACCACCACACTaGTTTACCCCAGTGTACCAG +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRLPPPH*FTPVYQ
Trigger: CTGGTACACTGGGGTAAATCAGTGTGGTGGTGGAAG...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCACATAGCCTTGCTCCCTaGTCCATACATGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPHSLAP*SIHARR
Trigger: TCTCCTGGCATGTATGGAGCAGGGAGCAAGGCTATG...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCATGTTCTTGTCCCACTTaGAGACAGGGAAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPCSCPT*RQGRWG
Trigger: CCCCCATCTTCCCTGTCTCCAAGTGGGACAAGAACA...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACTTGCAGCATTGGTGCTaGAAGTACCCTGCCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNLQHWC*KYPACE
Trigger: CTCACAGGCAGGGTACTTCCAGCACCAATGCTGCAA...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGCACCCTGGTTGGGTGTaGCTACTGTTTTATTCCGGC +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRHPGWV*LLFYSG
Trigger: GCCGGAATAAAACAGTAGCCACACCCAACCAGGGTG...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAGGGGTTTCACCATGTTaGTCAGACTGGCCTCGAACT +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPGVSPC*SDWPRT
Trigger: AGTTCGAGGCCAGTCTGACCAACATGGTGAAACCCC...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 72 bp CTCAGAGACCAGTCTCAGCAAACACAGGTGGCGCCGTaGATCAACAGCACATGGAAATGTAAACTTCAATGT +
Preference number: 4 (lower is better)
Translates to: LRDQSQQTQVAP*INSTWKCKLQC
Trigger: ACATTGAAGTTTACATTTCCATGTGCTGTTGATCAACGGCGCCACCTGTGTTTGCTGAGACTGGTCTCTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTACTGAAGGCTCACAACTaGCACCCACTGAACAGACAC +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALLKAHN*HPLNRH
Trigger: GTGTCTGTTCAGTGGGTGTCAGTTGTGAGCCTTCAG...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTATCAAGTGCTTGTACTaGGTCATCTGGGACTTCATT +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVIKCLY*VIWDFI
Trigger: AATGAAGTCCCAGATGACTCAGTACAAGCACTTGAT...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTGTACATTCCATAGCTTaGCCGTTTTCTAGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVVHSIA*PFSSCK
Trigger: TTTGCAGCTAGAAAACGGTCAAGCTATGGAATGTAC...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTTCTTTATCCACCAGATaGTACCTTGCCCTAAATGCT +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVSLSTR*YLALNA
Trigger: AGCATTTAGGGCAAGGTATCATCTGGTGGATAAAGA...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACACTAGAGGGATGCGGTaGACACCACAGCTAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNTRGMR*TPQLAK
Trigger: TTTTGCTAGCTGTGGTGTTCACCGCATCCCTCTAGT...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAACAGGGTGGAGAGGGTaGGCCTTGTTAAACAGTGGA +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKTGWRG*ALLNSG
Trigger: TCCACTGTTTAACAAGGCTCACCCTCTCCACCCTGT...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACGTATCATGGTGGATTTaGACAGCCTTAGCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNVSWWI*TALAKA
Trigger: GGCCTTGGCTAAGGCTGTGCAAATCCACCATGATAC...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGCAGCCATATAGAGTGTaGCTCCAGGCCTTTTATCCC +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRQPYRV*LQAFYP
Trigger: GGGATAAAAGGCCTGGAGCCACACTCTATATGGCTG...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACATGGCTCAATTTTGTTaGCGCATCAGACAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNMAQFC*RIRQCC
Trigger: GCAGCACTGTCTGATGCGTCAACAAAATTGAGCCAT...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTCTGCAAGTAGTCGTGTaGGTTACCTTGATTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTLQVVV*VTLIPR
Trigger: CCTGGGAATCAAGGTAACTCACACGACTACTTGCAG...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTATCTTTCACACCACATaGCAGTGCCTCAACAGGCTG +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTIFHTT*QCLNRL
Trigger: CAGCCTGTTGAGGCACTGTCATGTGGTGTGAAAGAT...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTACTGTCAGCATGTACTTaGACCAGCACAAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALLSACT*TSTSLQ
Trigger: CTGCAGACTTGTGCTGGTGCAAGTACATGCTGACAG...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTTCCCTGCTCCATACATaGCAGGAGATGGTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTSLLHT*QEMVRS
Trigger: ACTTCTCACCATCTCCTGGCATGTATGGAGCAGGGA...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAATGAATATGTTCTGCTaGCCAGAACGCTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPMNMFC*PERWLH
Trigger: ATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCAT...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTATTACAGACCTCGAGTaGCAAGTATGTATGCTTTTG +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVITDLE*QVCMLL
Trigger: CAAAAGCATACATACTTGCCACTCGAGGTCTGTAAT...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTACCCAGACACCCTGGTTaGGTGTGGCTACTGTTTTAT +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALPRHPG*VWLLFY
Trigger: ATAAAACAGTAGCCACACCCAACCAGGGTGTCTGGG...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAAATGTGAGGGACGGCTaGTTCCCTGAATTCCTGCAT +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKNVRDG*FPEFLH
Trigger: ATGCAGGAATTCAGGGAACCAGCCGTCCCTCACATT...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGGTGTGCTGGGTATCATaGTGGATTTGCACAGCCTTA +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRVCWVS*WICTAL
Trigger: TAAGGCTGTGCAAATCCACCATGATACCCAGCACAC...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAACAAGTCAGTAAACTCTaGGCTGGGAAACACTGGCTG +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKQVSKL*AGKHWL
Trigger: CAGCCAGTGTTTCCCAGCCCAGAGTTTACTGACTTG...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 72 bp AGCCTAAAACTACTTCTAGAGAATGCACACCTCCCATaGATTGACACATGCATAACGATTCAGTCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: SLKLLLENAHLP*IDTCITIQSVP
Trigger: CGGGACTGACTGAATCGTTATGCATGTGTCAATCAATGGGAGGTGTGCATTCTCTAGAAGTAGTTTTAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACTGTACCAGGACTGACTaGGGTCTTACAAGCTGTATT +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNCTRTD*GLTSCI
Trigger: AATACAGCTTGTAAGACCTCAGTCAGTCCTGGTACA...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGCATCTTATCTCAACATaGGGATACAACCCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRHLIST*GYNPSL
Trigger: AAGGGAGGGGTTGTATCCTCATGTTGAGATAAGATG...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGGGGATTAAGGACGTCTaGACTCAGCTTAATGAGCAA +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRGIKDV*TQLNEQ
Trigger: TTGCTCATTAAGCTGAGTGCAGACGTCCTTAATCCC...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAGAAGTACCCTGCCTGTaGGCTCTGTCATTTCATTGT +
Preference number: 4 (lower is better)
Translates to: EINICHLFTPGYVVLHFTEVPCL*ALSFHC
Trigger: ACAATGAAATGACAGAGCTCACAGGCAGGGTACTTC...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAGGGTGCCAAATTGGTTaGGTTCTTTTTCTGAGACTC +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKGCQIG*VLFLRL
Trigger: GAGTCTCAGAAAAAGAACTCAACCAATTTGGCACCC...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTAAATCCCATCTCCCTGTaGGTGGAATCCAGAATCTAT +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALNPISL*VESRIY
Trigger: ATAGATTCTGGATTCCACTCACAGGGAGATGGGATT...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGACACCTCCCATTGATTaGCACATGCATAACGATTCA +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRTPPID*HMHNDS
Trigger: TGAATCGTTATGCATGTGTCAATCAATGGGAGGTGT...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCACTACCACCTTGCTATTaGGCAAGAAAATATCACAGC +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPLPPCY*ARKYHS
Trigger: GCTGTGATATTTTCTTGCTCAATAGCAAGGTGGTAG...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAGAGTTGCAACAGTATTaGTACAATGCCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EINICHLFTPGYVVLHFTELQQY*YNALSL
Trigger: GAGGCTGAGGGCATTGTATCAATACTGTTGCAACTC...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTATGTACATGTTTCTTTTaGCATCATACCCAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALCTCFF*HHTQAA
Trigger: GGCAGCCTGGGTATGATGGCAAAAGAAACATGTACA...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACCCGGTAGAAAGCAGTTaGAGATACATCAATGTTGAG +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNPVESS*RYINVE
Trigger: CTCAACATTGATGTATCTGCAACTGCTTTCTACCGG...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACACATTGTTTCTGAGGTaGAAAACAAGCAACTGCCCA +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNTLFLR*KTSNCP
Trigger: TGGGCAGTTGCTTGTTTTGCACCTCAGAAACAATGT...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACATACCTTGCCCTAAATaGTACAAGCCGGGCATAATA +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNIPCPK*YKPGII
Trigger: TATTATGCCCGGCTTGTAGCATTTAGGGCAAGGTAT...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAGGTACATTTGCAAGTTaGAGCATCACTCATTGTACC +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPGTFAS*SITHCT
Trigger: GGTACAATGAGTGATGCTGCAACTTGCAAATGTACC...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGCATGGGGTGCCAAATTaGTTGAGTTCTTTTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRHGVPN*LSSFSE
Trigger: CTCAGAAAAAGAACTCAACCAATTTGGCACCCCATG...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTACAAGGAAAACTTCTTaGAGTTGCAACAGTATTGAT +
Preference number: 4 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVTRKTS*SCNSID
Trigger: ATCAATACTGTTGCAACTCCAAGAAGTTTTCCTTGT...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 72 bp CGATTCAGTCAGTCCCGAGGGGGTTACCTATTCAAATaGTCAAGCCGAATTAAAGTAAAACTATGCATTCAG +
Preference number: 4 (lower is better)
Translates to: RFSQSRGGYLFK*SSRIKVKLCIQ
Trigger: CTGAATGCATAGTTTTACTTTAATTCGGCTTGACAATTTGAATAGGTAACCCCCTCGGGACTGACTGAATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGCAAATATTTGCATCTTaGAGTGCCGCACCATTGTAT +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRQIFAS*SAAPLY
Trigger: ATACAATGGTGCGGCACTTCAAGATGCAAATATTTG...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAACAACTGACACCCACTaGACAGACACTTTAAATGTT +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPTTDTH*TDTLNV
Trigger: AACATTTAAAGTGTCTGTTCAGTGGGTGTCAGTTGT...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTATCATTGTGGAAGTCTaGTTGTCTGTGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTIIVEV*LSVSFL
Trigger: CAAGAAGCTCACAGACAATCAGACTTCCACAATGAT...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACACGATCACCAAATATTTaGATCTTGAAGTGCCGCACC +
Preference number: 4 (lower is better)
Translates to: EINICHLFTPGYVVLHFTRSPNI*ILKCRT
Trigger: GGTGCGGCACTTCAAGATGCAAATATTTGGTGATCG...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTACCTTTCTGTTTTATCTaGACAGAAGAGTCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALPFCFI*TEESCV
Trigger: CACACACGACTCTTCTGTGCAGATAAAACAGAAAGG...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACCTATGCATTCAGACTTaGTTGCAATCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNLCIQT*LQSYCC
Trigger: GCAGCAATATGATTGCAAGCAAGTCTGAATGCATAG...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAACAGTATTGATACAATaGCCTCAGCCTCCACTTTCT +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKTVLIQ*PQPPLS
Trigger: AGAAAGTGGAGGCTGAGGGCATTGTATCAATACTGT...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAAAATACATCGTGTGCTaGGTATCATGGTGGATTTGC +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKKYIVC*VSWWIC
Trigger: GCAAATCCACCATGATACCCAGCACACGATGTATTT...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTAGCAACTCCCTTTGTTTaGACAAGAAAGGAATCCCAT +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALATPFV*TRKESH
Trigger: ATGGGATTCCTTTCTTGTCCAAACAAAGGGAGTTGC...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGTCACTCCTGATGTCCTaGATAGAGAATTACAAGTCA +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRSLLMS*IENYKS
Trigger: TGACTTGTAATTCTCTATCCAGGACATCAGGAGTGA...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAACAGATACATCAATGTTaGGCATCATATTCCACATGG +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKQIHQC*ASYSTW
Trigger: CCATGTGGAATATGATGCTCAACATTGATGTATCTG...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGTGTTCATTGATGTTCTaGATGTCTAAAACCTCACAC +
Preference number: 4 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRCSLMF*MSKTSH
Trigger: GTGTGAGGTTTTAGACATTCAGAACATCAATGAACA...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTATACGCAGCTGGTCAGTaGAACTCTTTAGTAAATCTT +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALYAAGQ*NSLVNL
Trigger: AAGATTTACTAAAGAGTTTCACTGACCAGCTGCGTA...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAGGAAAGGGTTTGAGGTaGGGTCTTCACTACATTTTT +
Preference number: 4 (lower is better)
Translates to: EINICHLFTPGYVVLHFTGKGLR*GLHYIF
Trigger: AAAAATGTAGTGAAGACCTCACCTCAAACCCTTTCC...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR TCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACATCAGCCTTTGCACATTaGGGTAAAAATTCAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EINICHLFTPGYVVLHFTSAFAH*GKNSVQ
Trigger: CTGGACTGAATTTTTACCTCAATGTGCAAAGGCTGA...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCATCATTTTACAGAACTTaGTTTCATCCCACTATCTGC +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPSFYRT*FHPTIC
Trigger: GCAGATAGTGGGATGAAAGCAAGTTCTGTAAAATGA...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTCTCCTGGCTATGTTGTaGTTCATTTTACAGAACTTG +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTLLAML*FILQNL
Trigger: CAAGTTCTGTAAAATGAAGCACAACATAGCCAGGAG...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTTTGCAATCATATTGCTaGAACTCTGATTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTLQSYC*NSDSAV
Trigger: CACTGCAGAATCAGAGTTGCAGCAATATGATTGCAA...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAGCATTCAGACTTGCTTaGAATCATATTGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKAFRLA*NHIAAT
Trigger: AGTTGCAGCAATATGATTGCAAGCAAGTCTGAATGC...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTAGAGATTTTACGCAGCTaGTCAGTGAAACTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALEILRS*SVKLFS
Trigger: ACTAAAGAGTTTCACTGACCAGCTGCGTAAAATCTC...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAATTGTACCTTAAGGACTaGCAAAGCCTTTCCAATAAG +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKLYLKD*QSLSNK
Trigger: CTTATTGGAAAGGCTTTGCCAGTCCTTAAGGTACAA...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAATTTGCATCTTGAAGTaGCGCACCATTGTATCTACT +
Preference number: 4 (lower is better)
Translates to: EINICHLFTPGYVVLHFTICILK*RTIVST
Trigger: AGTAGATACAATGGTGCGGCACTTCAAGATGCAAAT...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACATGCTTGCAATCATATTaGTGCAACTCTGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: EINICHLFTPGYVVLHFTCLQSY*CNSDSA
Trigger: TGCAGAATCAGAGTTGCAGCAATATGATTGCAAGCA...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAGCCATTACAGTGTACTaGATACTTATTAGACAATTG +
Preference number: 4 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPAITVY*ILIRQL
Trigger: CAATTGTCTAATAAGTATGCAGTACACTGTAATGGC...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACAATATAAGTTATTCCTaGCCGGTAATCTTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNNISYS*PVIFFQ
Trigger: TTGGAAGAAGATTACCGGCCAGGAATAACTTATATT...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAAGTGCTTTATATTGCTaGGATTTTGAGAAGGCTAGT +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKSALYC*DFEKAS
Trigger: ACTAGCCTTCTCAAAATCCCAGCAATATAAAGCACT...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CCA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAACCACCAAAACATAATTaGTTCAACATTTGGGTCATC +
Preference number: 4 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKPPKHN*FNIWVI
Trigger: GATGACCCAAATGTTGAACCAATTATGTTTTGGTGG...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373210.4
3UTR CAA 72 bp AGCCGAATTAAAGTAAAACTATGCATTCAGACTTGCTaGCAATCATATTGCTGCAACTCTGATTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: SRIKVKLCIQTC*QSYCCNSDSAV
Trigger: CACTGCAGAATCAGAGTTGCAGCAATATGATTGCAAGCAAGTCTGAATGCATAGTTTTACTTTAATTCGGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR GCA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTAATTCCTCCAAGTTTTaGATTTATCTTCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: CLFESAAKYSANCLSACTNSSKF*IYLQAK
Trigger: CTTTGCCTGAAGATAAATGCAAAACTTGGAGGAATT...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS TCA 90 bp CCGCTCCGGGCCCCGCCGCCGCCGCCGCCGCCGCCGCGTAACGCTTaGTCTCCGGAATATTGGCGCTGGGGTGGCGCCGCGGAGACGCGG +
Preference number: 5 (lower is better)
Translates to: PLRAPPPPPPPPRNA*SPEYWRWGGAAETR
Trigger: CCGCGTCTCCGCGGCGCCACCCCAGCGCCAATATTCCGGAGATCAAGCGTTACGCGGCGGCGGCGGCGGCGGCGGCGGGGCCCGGAGCGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCTTGTTCTTGTCCCACTaGGAGACAGGGAAGATGGGG +
Preference number: 5 (lower is better)
Translates to: LISKPEALKCRCGARWPALFLSH*ETGKMG
Trigger: CCCCATCTTCCCTGTCTCCAAGTGGGACAAGAACAA...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCGAACACCGAGGGCCTTaGATGAGGCACAAGCACATT +
Preference number: 5 (lower is better)
Translates to: LISKPEALKCRCGARWPAEHRGP*MRHKHI
Trigger: AATGTGCTTGTGCCTCATCAAAGGCCCTCGGTGTTC...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCTCTGCAGTGAAGCAGTaGTCATCCCACAAGACCTGG +
Preference number: 5 (lower is better)
Translates to: LISKPEALKCRCGARWPASAVKQ*SSHKTW
Trigger: CCAGGTCTTGTGGGATGACAACTGCTTCACTGCAGA...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS TCA 90 bp CACAGCCTTAGCCAAGGCCTGAGGATCCCGGCCGTTGCTCTGTCCTaGCACATGACTGCCTTCCGCACTGTCATGATCTTTATCCACCAG +
Preference number: 5 (lower is better)
Translates to: HSLSQGLRIPAVALS*HMTAFRTVMIFIHQ
Trigger: CTGGTGGATAAAGATCATGACAGTGCGGAAGGCAGTCATGTGTCAGGACAGAGCAACGGCCGGGATCCTCAGGCCTTGGCTAAGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCAGCTACCTGTTTCATTaGTCCCTCAGATACCCCTCC +
Preference number: 5 (lower is better)
Translates to: LISKPEALKCRCGARWPASYLFH*SLRYPS
Trigger: GGAGGGGTATCTGAGGGACAAATGAAACAGGTAGCT...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCGTCTTACAAGCTGTATaGTTCGAGGTCGAGCGTAGA +
Preference number: 5 (lower is better)
Translates to: LISKPEALKCRCGARWPAVLQAV*FEVERR
Trigger: TCTACGCTCGACCTCGAACAATACAGCTTGTAAGAC...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTATCCCAGACACCCTGGTaGGGTGTGGCTACTGTTTTA +
Preference number: 5 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVSQTPW*GVATVL
Trigger: TAAAACAGTAGCCACACCCAACCAGGGTGTCTGGGA...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCCCAAATATTTGCATCTaGAAGTGCCGCACCATTGTA +
Preference number: 5 (lower is better)
Translates to: LISKPEALKCRCGARWPAPNICI*KCRTIV
Trigger: TACAATGGTGCGGCACTTCAAGATGCAAATATTTGG...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TTAATAAGCAAGCCCGAGGCACTCAAGTGCAGGTGTGGTGCCCGCTGGCCAGCCTCACTCCTGGCTATGTaGTGCTTCATTTTACAGAAC +
Preference number: 5 (lower is better)
Translates to: LISKPEALKCRCGARWPASLLAM*CFILQN
Trigger: GTTCTGTAAAATGAAGCACAACATAGCCAGGAGTGA...GGCTGGCCAGCGGGCACCACACCTGCACTTGAGTGCCTCGGGCTTGCTTATTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAGTGTACATGTTTCTTTaGCCATCATACCCAGGCTGC +
Preference number: 5 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVVYMFL*PSYPGC
Trigger: GCAGCCTGGGTATGATGGCAAAAGAAACATGTACAC...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGGTGCCTGCTGGTACATaGCCACTTTTCCCTACCCTT +
Preference number: 5 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQVPAGT*PLFPTL
Trigger: AAGGGTAGGGAAAAGTGGCAATGTACCAGCAGGCAC...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS GCA 90 bp GGGTGTGGCTACTGTTTTATTCCGGCCTCCATATTGCAGCATTGGTaGTGGAAGTACCCTGCCTGTGAGCTCTGTCATTTCATTGTGGAC +
Preference number: 5 (lower is better)
Translates to: GCGYCFIPASILQHW*WKYPACELCHFIVD
Trigger: GTCCACAATGAAATGACAGAGCTCACAGGCAGGGTACTTCCAGCACCAATGCTGCAATATGGAGGCCGGAATAAAACAGTAGCCACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTACAAGTATGTATGCTTTaGTTCTTGTCCCACTTGGAG +
Preference number: 5 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVQVCML*FLSHLE
Trigger: CTCCAAGTGGGACAAGAACAAAAGCATACATACTTG...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTACAGGCTGATCAGCCTTaGCACATTGAGGTAAAAATT +
Preference number: 5 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVQADQP*HIEVKI
Trigger: AATTTTTACCTCAATGTGCAAAGGCTGATCAGCCTG...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAAGAAAGTACCTCGTATaGCTAGAGACATACATCCAG +
Preference number: 5 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVRKYLV*LETYIQ
Trigger: CTGGATGTATGTCTCTAGCAATACGAGGTACTTTCT...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS TCA 90 bp CACCAACTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAGGCATTTaGAACATTTTGAGGCTGCATGGGGTGCCAAATTGGTTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: HQLKSTWLDLEAVGI*NILRLHGVPNWLSS
Trigger: AGAACTCAACCAATTTGGCACCCCATGCAGCCTCAAAATGTTTCAAATGCCTACCGCCTCTAGATCGAGCCACGTTGACTTCAGTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496257.1
CDS CCA 90 bp TGTGGCTACTGTTTTATTCCGGCCTCCATATTGCAGCATTGGTGCTaGAAGTACCCTGCCTGTGAGCTCTGTCATTTCATTGTGGACAAC +
Preference number: 5 (lower is better)
Translates to: CGYCFIPASILQHWC*KYPACELCHFIVDN
Trigger: GTTGTCCACAATGAAATGACAGAGCTCACAGGCAGGGTACTTCCAGCACCAATGCTGCAATATGGAGGCCGGAATAAAACAGTAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGAGACACTTTAAATGTTaGGTCTTTACCCTCGCCTGG +
Preference number: 5 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQRHFKC*VFTLAW
Trigger: CCAGGCGAGGGTAAAGACCAAACATTTAAAGTGTCT...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAATGGGGGTATTTCAGTaGCAGACTATACTTTTGCTT +
Preference number: 5 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVMGVFQ*QTILLL
Trigger: AAGCAAAAGTATAGTCTGCAACTGAAATACCCCCAT...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTTTGTCTGTGAGCTTCTaGATACATCGCTGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVLSVSF*IHRCPA
Trigger: GGCAGGACAGCGATGTATCAAGAAGCTCACAGACAA...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTAATTGTTTTCACCCCATaGTGTCTATCTCTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVIVFTP*CLSLSL
Trigger: TAGGGAAAGAGATAGACACAATGGGGTGAAAACAAT...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAGCTGCTGGTAGAAGACCACCTGAAGTCAACGTGGCTCGATCTAGAGGCGGTATATATTGCTGGGATTTaGAGAAGGCTAGTTTATGAG +
Preference number: 5 (lower is better)
Translates to: ELLVEDHLKSTWLDLEAVYIAGI*RRLVYE
Trigger: CTCATAAACTAGCCTTCTCAAAATCCCAGCAATATA...TACCGCCTCTAGATCGAGCCACGTTGACTTCAGGTGGTCTTCTACCAGCAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGAAGCAACCATGTATGTaGCCATTACAGTGTACTGCA +
Preference number: 5 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQKQPCM*PLQCTA
Trigger: TGCAGTACACTGTAATGGCAACATACATGGTTGCTT...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACCCCTATCCCGTCCAATaGGTAGTGGATGTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNPYPVQ*VVDVLC
Trigger: ACACAGCACATCCACTACCAATTGGACGGGATAGGG...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTTGGGTCACCTCAACTTaGAGACCTCTGATTTCTTTG +
Preference number: 5 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVWVTST*RPLISL
Trigger: CAAAGAAATCAGAGGTCTCAAAGTTGAGGTGACCCA...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAACTGTAGAGGAGCTCTaGGGAGATCTCCTGCCGGGA +
Preference number: 5 (lower is better)
Translates to: EINICHLFTPGYVVLHFTTVEEL*GDLLPG
Trigger: TCCCGGCAGGAGATCTCCCAAGAGCTCCTCTACAGT...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GACCGTCTCATGAGTTCAAGCAAACACCCTTCACCATCATTTCCCCACCAGCAGAAAAATGGCTCAATTTaGTTGACGCATCAGACAGTG +
Preference number: 5 (lower is better)
Translates to: DRLMSSSKHPSPSFPHQQKNGSI*LTHQTV
Trigger: CACTGTCTGATGCGTCAACAAAATTGAGCCATTTTT...CTGCTGGTGGGGAAATGATGGTGAAGGGTGTTTGCTTGAACTCATGAGACGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCACCTGTCAGCATGTACTaGCACCAGCACAAGTCTGCA +
Preference number: 5 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPPVSMY*HQHKSA
Trigger: TGCAGACTTGTGCTGGTGCAAGTACATGCTGACAGG...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACACACAGGTGGCGCCGTaGATCAACAGCACATGGAAA +
Preference number: 5 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNTQVAP*INSTWK
Trigger: TTTCCATGTGCTGTTGATCAACGGCGCCACCTGTGT...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CCA 90 bp ATTGGTGCTGGAAGTACCCTGCCTGTGAGCTCTGTCATTTCATTGTaGACAACAATACCAAATTCTTTAAGGTATGGATCAGGTCCACCC +
Preference number: 5 (lower is better)
Translates to: IGAGSTLPVSSVISL*TTIPNSLRYGSGPP
Trigger: GGGTGGACCTGATCCATACCTTAAAGAATTTGGTATTGTTGTCCACAATGAAATGACAGAGCTCACAGGCAGGGTACTTCCAGCACCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTAGACCTCTGATTTCTTaGGTAAATTTGACACGCTGG +
Preference number: 5 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVRPLIS*VNLTRW
Trigger: CCAGCGTGTCAAATTTACCAAAGAAATCAGAGGTCT...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAACCACCCACCATACTGTaGCTCTTCACCAGTCTACTG +
Preference number: 5 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKPPTIL*LFTSLL
Trigger: CAGTAGACTGGTGAAGAGCAACAGTATGGTGGGTGG...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTGGTATCATGGTGGATTaGCACAGCCTTAGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: CLFESAAKYSANCLSACTGIMVD*HSLSQG
Trigger: GCCTTGGCTAAGGCTGTGCAAATCCACCATGATACC...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AAACTCTGGGCTGGGAAACACTGGCTGGTGCTACCAAGACACTATGTAACTGTTTGCATTCAGACTTGCTaGCAATCATATTGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: KLWAGKHWLVLPRHYVTVCIQTC*QSYCCN
Trigger: GTTGCAGCAATATGATTGCAAGCAAGTCTGAATGCA...AACAGTTACATAGTGTCTTGGTAGCACCAGCCAGTGTTTCCCAGCCCAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTATCTACTACCTCCCTGTaGACTCTACGAGGCCGTTTT +
Preference number: 5 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALSTTSL*TLRGRF
Trigger: AAAACGGCCTCGTAGAGTCAACAGGGAGGTAGTAGA...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAGTCCTGGATGACCTCTaGACTGTAGAGGAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: EINICHLFTPGYVVLHFTVLDDL*TVEELL
Trigger: CAAGAGCTCCTCTACAGTCAAGAGGTCATCCAGGAC...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACATTCGGGAACATAGCCTaGCTCCCTGCTCCATACATG +
Preference number: 5 (lower is better)
Translates to: EINICHLFTPGYVVLHFTFGNIA*LPAPYM
Trigger: CATGTATGGAGCAGGGAGCAAGGCTATGTTCCCGAA...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGCCCCTCAGCAAGTTTTaGCCAATAATCCCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRPLSKF*PIIPAL
Trigger: AAGAGCTGGGATTATTGGCAAAAACTTGCTGAGGGG...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAACCGATCACCAAATATTaGCATCTTGAAGTGCCGCAC +
Preference number: 5 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKPITKY*HLEVPH
Trigger: GTGCGGCACTTCAAGATGCAAATATTTGGTGATCGG...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACACTGCAAAGGAAAAGTTaGATGACTGGCTGGCCGTCT +
Preference number: 5 (lower is better)
Translates to: EINICHLFTPGYVVLHFTLQRKS*MTGWPS
Trigger: AGACGGCCAGCCAGTCATCAAACTTTTCCTTTGCAG...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp CTTTTCCATCCCTCACTCCTGATGTCCTGGATAGAGAATTACAAGTCAGTAAACGGGGTGCCAAATTGGTaGAGTTCTTTTTCTGAGACT +
Preference number: 5 (lower is better)
Translates to: LFHPSLLMSWIENYKSVNGVPNW*SSFSET
Trigger: AGTCTCAGAAAAAGAACTCAACCAATTTGGCACCCC...GTTTACTGACTTGTAATTCTCTATCCAGGACATCAGGAGTGAGGGATGGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CCA 90 bp CTCTGTCATTTCATTGTGGACAACAATACCAAATTCTTTAAGGTATaGATCAGGTCCACCCACCATACTGTTGCTCTTCACCAGTCTACT +
Preference number: 5 (lower is better)
Translates to: LCHFIVDNNTKFFKV*IRSTHHTVALHQST
Trigger: AGTAGACTGGTGAAGAGCAACAGTATGGTGGGTGGACCTGATCCATACCTTAAAGAATTTGGTATTGTTGTCCACAATGAAATGACAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp CTTCTTGTAAAGTCCTTTAGAAAGTTCAGGCTGATCAGCCTTTGCACATTGAGGTGGCTAACAGTCGAATaGGTTTTCCAACAGTTCCAA +
Preference number: 5 (lower is better)
Translates to: LLVKSFRKFRLISLCTLRWLTVE*VFQQFQ
Trigger: TTGGAACTGTTGGAAAACCAATTCGACTGTTAGCCA...CCTCAATGTGCAAAGGCTGATCAGCCTGAACTTTCTAAAGGACTTTACAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCATGGTACATTTGCAAGTaGCAGCATCACTCATTGTAC +
Preference number: 5 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPWYICK*QHHSLY
Trigger: GTACAATGAGTGATGCTGCAACTTGCAAATGTACCA...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAAGAGTTCTTCACATCTaGGATTCCAGCAAGTCCTCC +
Preference number: 5 (lower is better)
Translates to: EINICHLFTPGYVVLHFTRVLHI*DSSKSS
Trigger: GGAGGACTTGCTGGAATCCAAGATGTGAAGAACTCT...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AGAATTTACAGTAAGAATGAATATGTTCTGCTGCCCAGAACGCTGGCTGCATTAAATGCACACCTCCCATaGATTGACACATGCATAACG +
Preference number: 5 (lower is better)
Translates to: RIYSKNEYVLLPRTLAALNAHLP*IDTCIT
Trigger: CGTTATGCATGTGTCAATCAATGGGAGGTGTGCATT...TAATGCAGCCAGCGTTCTGGGCAGCAGAACATATTCATTCTTACTGTAAATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTTACATGCCTTTCGAATaGCTATTAGTTCTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: CLFESAAKYSANCLSACTYMPFE*LLVLAK
Trigger: CTTGGCCAGAACTAATAGCAATTCGAAAGGCATGTA...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TCTGATTCTGCAGTGATTAGCTCTAAAGATTCACCCCTCAGCAAGTTTTTGCCAACTATGCATTCAGACTaGCTTGCAATCATATTGCTG +
Preference number: 5 (lower is better)
Translates to: SDSAVISSKDSPLSKFLPTMHSD*LAIILL
Trigger: CAGCAATATGATTGCAAGCAAGTCTGAATGCATAGT...TGGCAAAAACTTGCTGAGGGGTGAATCTTTAGAGCTAATCACTGCAGAATCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAATTATATTTTCCCACTaGAAGGGTAGGCAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKIIFSH*KGRQLC
Trigger: GCAAAGCTGCCTACCCTTCAAGTGGGAAAATATAAT...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTGCTACCACCTTGCTATaGAGCAAGAAAATATCACAG +
Preference number: 5 (lower is better)
Translates to: CLFESAAKYSANCLSACTATTLL*SKKISQ
Trigger: CTGTGATATTTTCTTGCTCAATAGCAAGGTGGTAGC...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTAGCAGAGCTACCACCTaGCTATTGAGCAAGAAAATA +
Preference number: 5 (lower is better)
Translates to: CLFESAAKYSANCLSACTSRATT*LLSKKI
Trigger: TATTTTCTTGCTCAATAGCAAGGTGGTAGCTCTGCT...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAGAGTCTGTTAGAGGTTaGGTCTGTTCATTGATGTTC +
Preference number: 5 (lower is better)
Translates to: EINICHLFTPGYVVLHFTESVRG*VCSLMF
Trigger: GAACATCAATGAACAGACCAAACCTCTAACAGACTC...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp TGCCTATTTGAATCTGCAGCCAAATATAGTGCAAATTGCCTGTCAGCATGTACTATTTCTTTGGTAAATTaGACACGCTGGGAGTCTGTT +
Preference number: 5 (lower is better)
Translates to: CLFESAAKYSANCLSACTISLVN*TRWESV
Trigger: AACAGACTCCCAGCGTGTCAAATTTACCAAAGAAAT...AGTACATGCTGACAGGCAATTTGCACTATATTTGGCTGCAGATTCAAATAGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAATTAGAGCAACTCCCTTaGTTTGGACAAGAAAGGAAT +
Preference number: 5 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKLEQLP*FGQERN
Trigger: ATTCCTTTCTTGTCCAAACAAAGGGAGTTGCTCTAA...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp GAAATTAACATCTGCCATCTCTTCACTCCTGGCTATGTTGTGCTTCATTTTACAGCAGATACATCAATGTaGAGCATCATATTCCACATG +
Preference number: 5 (lower is better)
Translates to: EINICHLFTPGYVVLHFTADTSM*SIIFHM
Trigger: CATGTGGAATATGATGCTCAACATTGATGTATCTGC...TGTAAAATGAAGCACAACATAGCCAGGAGTGAAGAGATGGCAGATGTTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS-3UTR CAA 90 bp AGCCCCTCACCAACATGTCCTGATTTGTATTATCCAAGTGAGGTATTTGCAAAAAGCTCTGTCATTTCATaGTGGACAACAATACCAAAT +
Preference number: 5 (lower is better)
Translates to: SPSPTCPDLYYPSEVFAKSSVIS*WTTIPN
Trigger: ATTTGGTATTGTTGTCCACAATGAAATGACAGAGCT...TTTTGCAAATACCTCACTTGGATAATACAAATCAGGACATGTTGGTGAGGGGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS TCA 72 bp TTTCCAACAGTTCCAAGGCCAGGACGACGAGGTGGCTaGAACAGGCTAGCCGGAGGTCCGGGTCCCAGCGCC +
Preference number: 6 (lower is better)
Translates to: FPTVPRPGRRGG*NRLAGGPGPSA
Trigger: GGCGCTGGGACCCGGACCTCCGGCTAGCCTGTTTCAGCCACCTCGTCGTCCTGGCCTTGGAACTGTTGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS TCA 72 bp AGCCAAGGCCTGAGGATCCCGGCCGTTGCTCTGTCCTaGCACATGACTGCCTTCCGCACTGTCATGATCTTT +
Preference number: 6 (lower is better)
Translates to: SQGLRIPAVALS*HMTAFRTVMIF
Trigger: AAAGATCATGACAGTGCGGAAGGCAGTCATGTGTCAGGACAGAGCAACGGCCGGGATCCTCAGGCCTTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CAA 72 bp GGCAAAATACATCGTGTGCTGGGTATCATGGTGGATTaGCACAGCCTTAGCCAAGGCCTGAGGATCCCGGCC +
Preference number: 6 (lower is better)
Translates to: GKIHRVLGIMVD*HSLSQGLRIPA
Trigger: GGCCGGGATCCTCAGGCCTTGGCTAAGGCTGTGCAAATCCACCATGATACCCAGCACACGATGTATTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373210.4
ENST00000496257.1
CDS CAA 90 bp AGACTCTCAGGCAAAATACATCGTGTGCTGGGTATCATGGTGGATTaGCACAGCCTTAGCCAAGGCCTGAGGATCCCGGCCGTTGCTCTG +
Preference number: 6 (lower is better)
Translates to: RLSGKIHRVLGIMVD*HSLSQGLRIPAVAL
Trigger: CAGAGCAACGGCCGGGATCCTCAGGCCTTGGCTAAGGCTGTGCAAATCCACCATGATACCCAGCACACGATGTATTTTGCCTGAGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373210.4
ENST00000496257.1
CDS CAA 72 bp CTCTCGAACCATGTTAGTCAGGTCCTGGATGACCTCTaGACTGTAGAGGAGCTCTTGGGAGATCTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: LSNHVSQVLDDL*TVEELLGDLLP
Trigger: CGGCAGGAGATCTCCCAAGAGCTCCTCTACAGTCAAGAGGTCATCCAGGACCTGACTAACATGGTTCGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CAA 90 bp AATCAGCAGCTCTCGAACCATGTTAGTCAGGTCCTGGATGACCTCTaGACTGTAGAGGAGCTCTTGGGAGATCTCCTGCCGGGAAGTCTG +
Preference number: 6 (lower is better)
Translates to: NQQLSNHVSQVLDDL*TVEELLGDLLPGSL
Trigger: CAGACTTCCCGGCAGGAGATCTCCCAAGAGCTCCTCTACAGTCAAGAGGTCATCCAGGACCTGACTAACATGGTTCGAGAGCTGCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS GCA 72 bp TACTGTTTTATTCCGGCCTCCATATTGCAGCATTGGTaGTGGAAGTACCCTGCCTGTGAGCTCTGTCATTTC +
Preference number: 6 (lower is better)
Translates to: YCFIPASILQHW*WKYPACELCHF
Trigger: GAAATGACAGAGCTCACAGGCAGGGTACTTCCAGCACCAATGCTGCAATATGGAGGCCGGAATAAAACAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS TCA 72 bp GGGAAGGTGTCTTGTGATAACATCAAGTGCTTGTACTaGGTCATCTGGGACTTCATTCAAGTGCCCAGCCAA +
Preference number: 6 (lower is better)
Translates to: GKVSCDNIKCLY*VIWDFIQVPSQ
Trigger: TTGGCTGGGCACTTGAATGAAGTCCCAGATGACTCAGTACAAGCACTTGATGTTATCACAAGACACCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CCA 72 bp TGTTTTATTCCGGCCTCCATATTGCAGCATTGGTGCTaGAAGTACCCTGCCTGTGAGCTCTGTCATTTCATT +
Preference number: 6 (lower is better)
Translates to: CFIPASILQHWC*KYPACELCHFI
Trigger: AATGAAATGACAGAGCTCACAGGCAGGGTACTTCCAGCACCAATGCTGCAATATGGAGGCCGGAATAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CAA 72 bp GAATCTGAACCTGAAAATGATTGGCTAACAGTCGAATaGGTTTTCCAACAGTTCCAAGGCCAGGACGACGAG +
Preference number: 6 (lower is better)
Translates to: ESEPENDWLTVE*VFQQFQGQDDE
Trigger: CTCGTCGTCCTGGCCTTGGAACTGTTGGAAAACCAATTCGACTGTTAGCCAATCATTTTCAGGTTCAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CAA 72 bp GAAGAGTCACCTCCATATCAACCCTATCCCGTCCAATaGGTAGTGGATGTGCTGTGTACATGTTTCTTTTGC +
Preference number: 6 (lower is better)
Translates to: EESPPYQPYPVQ*VVDVLCTCFFC
Trigger: GCAAAAGAAACATGTACACAGCACATCCACTACCAATTGGACGGGATAGGGTTGATATGGAGGTGACTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CAA 90 bp AGCATTGGTGCTGGAAGTACCCTGCCTGTGAGCTCTGTCATTTCATaGTGGACAACAATACCAAATTCTTTAAGGTATGGATCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: SIGAGSTLPVSSVIS*WTTIPNSLRYGSGP
Trigger: TGGACCTGATCCATACCTTAAAGAATTTGGTATTGTTGTCCACAATGAAATGACAGAGCTCACAGGCAGGGTACTTCCAGCACCAATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CAA 72 bp GCTGGAAGTACCCTGCCTGTGAGCTCTGTCATTTCATaGTGGACAACAATACCAAATTCTTTAAGGTATGGA +
Preference number: 6 (lower is better)
Translates to: AGSTLPVSSVIS*WTTIPNSLRYG
Trigger: TCCATACCTTAAAGAATTTGGTATTGTTGTCCACAATGAAATGACAGAGCTCACAGGCAGGGTACTTCCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS CCA 72 bp TTCATTGTGGACAACAATACCAAATTCTTTAAGGTATaGATCAGGTCCACCCACCATACTGTTGCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: FIVDNNTKFFKV*IRSTHHTVALH
Trigger: GTGAAGAGCAACAGTATGGTGGGTGGACCTGATCCATACCTTAAAGAATTTGGTATTGTTGTCCACAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373210.4
CDS GCA 72 bp TTCCCTACATTGTTTCTGAGGTGCAAAACAAGCAACTaGCCAAACTTTAATTTCAATGCCAGCATAAAACTG +
Preference number: 6 (lower is better)
Translates to: FPTLFLRCKTSN*PNFNFNASIKL
Trigger: CAGTTTTATGCTGGCATTGAAATTAAAGTTTGGGCAGTTGCTTGTTTTGCACCTCAGAAACAATGTAGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373210.4