RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGO3 (Homo sapiens)

Ensembl gene IDs: ENSG00000126070

Ensembl transcript IDs: ENST00000246314.10, ENST00000324350.9, ENST00000373191.9, ENST00000397828.3, ENST00000471099.1, ENST00000491443.2, ENST00000634486.1

Found 681 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGTGTTGCTACTGTCCGATTCCGTCCTCCATACTGGAGCATAGGTaGTGGAAGTACGCGTCCAGTTACATGAGCCATTTCATCCCGAAC +
Preference number: 1 (lower is better)
Translates to: RCCYCPIPSSILEHR*WKYASSYMSHFIPN
Trigger: GTTCGGGATGAAATGGCTCATGTAACTGGACGCGTACTTCCAGCACCTATGCTCCAGTATGGAGGACGGAATCGGACAGTAGCAACACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 90 bp CTGGCATGCTTAGCGCTCACCCTTTCCTTGAACACAGAGATCCGCTaGCAGTCATTCCTGCTGAAGGGCAAGTCAGGTTTTATTTCCCTA +
Preference number: 1 (lower is better)
Translates to: LACLALTLSLNTEIR*QSFLLKGKSGFISL
Trigger: TAGGGAAATAAAACCTGACTTGCCCTTCAGCAGGAATGACTGGCAGCGGATCTCTGTGTTCAAGGAAAGGGTGAGCGCTAAGCATGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 90 bp AGTGGCTCAGGCAAGGTCCGTCCTGTCAGTACTTCATGCAGTAGGTaGCAACTCACCCGAGAGACAAATTTGATTGACACCTTGAAAGGT +
Preference number: 1 (lower is better)
Translates to: SGSGKVRPVSTSCSR*QLTRETNLIDTLKG
Trigger: ACCTTTCAAGGTGTCAATCAAATTTGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGTACTGACAGGACGGACCTTGCCTGAGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 90 bp TCTAATTCCAGTGGCTCAGGCAAGGTCCGTCCTGTCAGTACTTCATaGAGTAGGTGCCAACTCACCCGAGAGACAAATTTGATTGACACC +
Preference number: 1 (lower is better)
Translates to: SNSSGSGKVRPVSTS*SRCQLTRETNLIDT
Trigger: GGTGTCAATCAAATTTGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGTACTGACAGGACGGACCTTGCCTGAGCCACTGGAATTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 90 bp GTGTATTTCATGGAGGGCAGATGTCGTAGCACCACATCAACGGCATaGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCAGTGGCTCA +
Preference number: 1 (lower is better)
Translates to: VYFMEGRCRSTTSTA*TGLVLIGLSNSSGS
Trigger: TGAGCCACTGGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCTACGACATCTGCCCTCCATGAAATACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 90 bp AATTACAGGTTGTGCTTTGTAGAAGGCAGTGGCAGAAATCAGACTTaGGGGATGGCTGGATTGGGGGAGAAGGGTGTCAAACACTGCTTC +
Preference number: 1 (lower is better)
Translates to: NYRLCFVEGSGRNQT*GMAGLGEKGVKHCF
Trigger: GAAGCAGTGTTTGACACCCTTCTCCCCCAATCCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAGCACAACCTGTAATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 90 bp TGTTGCTACTGTCCGATTCCGTCCTCCATACTGGAGCATAGGTGCTaGAAGTACGCGTCCAGTTACATGAGCCATTTCATCCCGAACTTT +
Preference number: 1 (lower is better)
Translates to: CCYCPIPSSILEHRC*KYASSYMSHFIPNF
Trigger: AAAGTTCGGGATGAAATGGCTCATGTAACTGGACGCGTACTTCCAGCACCTATGCTCCAGTATGGAGGACGGAATCGGACAGTAGCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 90 bp AAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTaGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGT +
Preference number: 1 (lower is better)
Translates to: KDQTLAPTQCWFLYG*RCPYSIDFTGNIRC
Trigger: ACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR TCA 90 bp GACAGGGAAGGTGCGGGTACTTCAGCTGAAGAGTATACTTTTCTCTaGAATACTGCGCTACTGTTCTCTCCACAGTTTGGCCGTTTTCTA +
Preference number: 1 (lower is better)
Translates to: DREGAGTSAEEYTFL*NTALLFSPQFGRFL
Trigger: TAGAAAACGGCCAAACTGTGGAGAGAACAGTAGCGCAGTATTTCAGAGAAAAGTATACTCTTCAGCTGAAGTACCCGCACCTTCCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 90 bp AGGCTGAGAATCCCTGTGCTGGAAAGCAGAGATGCCTCTATCAAGTaGCTTCCAAAACACTCAGTAATTCCTACTAGAATCCCTGCTAGA +
Preference number: 1 (lower is better)
Translates to: RLRIPVLESRDASIK*LPKHSVIPTRIPAR
Trigger: TCTAGCAGGGATTCTAGTAGGAATTACTGAGTGTTTTGGAAGGCACTTGATAGAGGCATCTCTGCTTTCCAGCACAGGGATTCTCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 90 bp TATATACACACTCATACATATACACACACACACACTCCCCCTCCCTaGTTCCTGGGACTCAGCTTGGCTTTCACTAATCACAGTGTCATT +
Preference number: 1 (lower is better)
Translates to: YIHTHTYTHTHTPPP*FLGLSLAFTNHSVI
Trigger: AATGACACTGTGATTAGTGAAAGCCAAGCTGAGTCCCAGGAAGCAGGGAGGGGGAGTGTGTGTGTGTGTATATGTATGAGTGTGTATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 90 bp TTACGCAGCTGGTCTGTGAAACCCTTCAATATTTCTTCTCTGCACTaGCTCTGTGTGGCAAAACAAGCGATAGCCCACATTTTGATTTCA +
Preference number: 1 (lower is better)
Translates to: LRSWSVKPFNISSLH*LCVAKQAIAHILIS
Trigger: TGAAATCAAAATGTGGGCTATCGCTTGTTTTGCCACACAGAGGCAGTGCAGAGAAGAAATATTGAAGGGTTTCACAGACCAGCTGCGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 90 bp GAACTCATATGGGTGTGTAATGTCTGTATCAACTGTTGTTCCAGCTaGGATATTGCCACTTCTTCCAACCCTTTCTGTCCTATCAGCACA +
Preference number: 1 (lower is better)
Translates to: ELIWVCNVCINCCSS*DIATSSNPFCPIST
Trigger: TGTGCTGATAGGACAGAAAGGGTTGGAAGAAGTGGCAATATCCCAGCTGGAACAACAGTTGATACAGACATTACACACCCATATGAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 90 bp CAACTATCCTCCTGCCTCATCCTCCTGAGAAGTTCGGACTACAGGTaGAAACCACCACATCTGGCTAATATCAACAATAATATTATCACT +
Preference number: 1 (lower is better)
Translates to: QLSSCLILLRSSDYR*KPPHLANINNNIIT
Trigger: AGTGATAATATTATTGTTGATATTAGCCAGATGTGGTGGTTTGCACCTGTAGTCCGAACTTCTCAGGAGGATGAGGCAGGAGGATAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 90 bp CCAAAGCTTCCTTTTGTTAAACTCCCTGGGATCAAACTGTATCCATaGACTGGGTCGGACTGTCTATGCCAAAATTCTTTCTTCATTACA +
Preference number: 1 (lower is better)
Translates to: PKLPFVKLPGIKLYP*TGSDCLCQNSFFIT
Trigger: TGTAATGAAGAAAGAATTTTGGCATAGACAGTCCGACCCAGTTCATGGATACAGTTTGATCCCAGGGAGTTTAACAAAAGGAAGCTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 90 bp GTCTTCTTTTCTGGAAGAATGCTCACCAAATTCACAGGAAAGAAGTaGCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGA +
Preference number: 1 (lower is better)
Translates to: VFFSGRMLTKFTGKK*LGDHLLLFTASWYG
Trigger: TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCCTGTGAATTTGGTGAGCATTCTTCCAGAAAAGAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 90 bp TGCTACTGCTTATATACAAATTGCGCAAATGGTAAATGTATGTTCTaGGTGGGAGGGGAGAGACGCACTCTCACAGAAAGTTATTTTATG +
Preference number: 1 (lower is better)
Translates to: CYCLYTNCANGKCMF*VGGERRTLTESYFM
Trigger: CATAAAATAACTTTCTGTGAGAGTGCGTCTCTCCCCTCCCACTCAGAACATACATTTACCATTTGCGCAATTTGTATATAAGCAGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 90 bp ACAGGTAAGAGAGAAACTAAAGATCTAAATCCATTAGGTTTCACGTaGAGATGGAATTCTGAAAGGCTAACAACAATGCCCACTGGAAAC +
Preference number: 1 (lower is better)
Translates to: TGKRETKDLNPLGFT*RWNSERLTTMPTGN
Trigger: GTTTCCAGTGGGCATTGTTGTTAGCCTTTCAGAATTCCATCTGCACGTGAAACCTAATGGATTTAGATCTTTAGTTTCTCTCTTACCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 90 bp AAAGGGTATCTACAGTCATTCCCTAAAGTTTCCCACATGAATCTGTaGAGCTCCCATGATAAAGGAAGATGTTTTACTCACACTGATCAA +
Preference number: 1 (lower is better)
Translates to: KGYLQSFPKVSHMNL*SSHDKGRCFTHTDQ
Trigger: TTGATCAGTGTGAGTAAAACATCTTCCTTTATCATGGGAGCTGCACAGATTCATGTGGGAAACTTTAGGGAATGACTGTAGATACCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTaGCTGGTTTCATATTGCATAATGATGCTGTGTTCCTTGATGAAG +
Preference number: 1 (lower is better)
Translates to: KTIAILPIGDRTKSS*LVSYCIMMLCSLMK
Trigger: CTTCATCAAGGAACACAGCATCATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR TCA 90 bp CTCTCTATACTTCGTACTGGTTCTGCTTCTCTAGGTTCTGAACCTTaGCTGATATGCCAGGCTTGTAGTTTATTTGCAAAAACAATTCTT +
Preference number: 1 (lower is better)
Translates to: LSILRTGSASLGSEP*LICQACSLFAKTIL
Trigger: AAGAATTGTTTTTGCAAATAAACTACAAGCCTGGCATATCAGTCAAGGTTCAGAACCTAGAGAAGCAGAACCAGTACGAAGTATAGAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324350.9
3UTR TCA 90 bp GGAAAGGAATCCTTCACACAACACTCTTCTATTATCTTGAACGTCTaGATAGCTTTTCCTTTGGAGAACTCAAATGCTTCCGCAAACATT +
Preference number: 1 (lower is better)
Translates to: GKESFTQHSSIILNV*IAFPLENSNASANI
Trigger: AATGTTTGCGGAAGCATTTGAGTTCTCCAAAGGAAAAGCTATTCAGACGTTCAAGATAATAGAAGAGTGTTGTGTGAAGGATTCCTTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CCA 90 bp AAGAGAGAAACTAAAGATCTAAATCCATTAGGTTTCACGTGCAGATaGAATTCTGAAAGGCTAACAACAATGCCCACTGGAAACAATCTG +
Preference number: 1 (lower is better)
Translates to: KRETKDLNPLGFTCR*NSERLTTMPTGNNL
Trigger: CAGATTGTTTCCAGTGGGCATTGTTGTTAGCCTTTCAGAATTCCATCTGCACGTGAAACCTAATGGATTTAGATCTTTAGTTTCTCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 90 bp AGCAGCTACAATATTGTAAGTGTATGGTCCTCCATGCCAGTAACCTaGTACTGTGATATAATACATGTATCAGCACTTTATGTAGACACA +
Preference number: 1 (lower is better)
Translates to: SSYNIVSVWSSMPVT*YCDIIHVSALYVDT
Trigger: TGTGTCTACATAAAGTGCTGATACATGTATTATATCACAGTATCAGGTTACTGGCATGGAGGACCATACACTTACAATATTGTAGCTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 90 bp TGCTGGATATCTTGCAGGGAAGAAACAACAGGATATGTTTGTAAGTaGACACTACACCATGATAAGGCCTATGTTTCTCTTATTCCTATT +
Preference number: 1 (lower is better)
Translates to: CWISCREETTGYVCK*TLHHDKAYVSLIPI
Trigger: AATAGGAATAAGAGAAACATAGGCCTTATCATGGTGTAGTGTTCACTTACAAACATATCCTGTTGTTTCTTCCCTGCAAGATATCCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CCA 90 bp ACTGCTTATATACAAATTGCGCAAATGGTAAATGTATGTTCTGAGTaGGAGGGGAGAGACGCACTCTCACAGAAAGTTATTTTATGTATA +
Preference number: 1 (lower is better)
Translates to: TAYIQIAQMVNVCSE*EGRDALSQKVILCI
Trigger: TATACATAAAATAACTTTCTGTGAGAGTGCGTCTCTCCCCTCCCACTCAGAACATACATTTACCATTTGCGCAATTTGTATATAAGCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 90 bp CAATATTGTAAGTGTATGGTCCTCCATGCCAGTAACCTGATACTGTaGTATAATACATGTATCAGCACTTTATGTAGACACATTAACCAT +
Preference number: 1 (lower is better)
Translates to: QYCKCMVLHASNLIL*YNTCISTLCRHINH
Trigger: ATGGTTAATGTGTCTACATAAAGTGCTGATACATGTATTATATCACAGTATCAGGTTACTGGCATGGAGGACCATACACTTACAATATTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 90 bp AAAGACCTCCAGTTTCTACAGATTCTGACAATAAAGAGTCACGTATaGAACATTTTTGCAGTCTTTCCTTCTTTGGTTCTAAAAAGACTA +
Preference number: 1 (lower is better)
Translates to: KDLQFLQILTIKSHV*NIFAVFPSLVLKRL
Trigger: TAGTCTTTTTAGAACCAAAGAAGGAAAGACTGCAAAAATGTTGCATACGTGACTCTTTATTGTCAGAATCTGTAGAAACTGGAGGTCTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 90 bp CGTAGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTaGTCTAATTCCAGTGGCTCAGGCAAGGTCCGTCCTGTCAGTACT +
Preference number: 2 (lower is better)
Translates to: RSTTSTAWTGLVLIG*SNSSGSGKVRPVST
Trigger: AGTACTGACAGGACGGACCTTGCCTGAGCCACTGGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CCA 90 bp CAGGTTGTGCTTTGTAGAAGGCAGTGGCAGAAATCAGACTTGGGGGATGGCTGGATAAGGATCAGACCTTaGCCCCCACACAGTGTTGGT +
Preference number: 2 (lower is better)
Translates to: QVVLCRRQWQKSDLGDGWIRIRP*PPHSVG
Trigger: ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTAT...CCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAGCACAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 90 bp GAATTACAGGTTGTGCTTTGTAGAAGGCAGTGGCAGAAATCAGACTaGGGGGATGGCTGGATTGGGGGAGAAGGGTGTCAAACACTGCTT +
Preference number: 2 (lower is better)
Translates to: ELQVVLCRRQWQKSD*GDGWIGGEGCQTLL
Trigger: AAGCAGTGTTTGACACCCTTCTCCCCCAATCCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAGCACAACCTGTAATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 90 bp TATACACACACACACACTCCCCCTCCCTGCTTCCTGGGACTCAGCTaGGCTTTCACTAATCACAGTGTCATTTCTAACACTGCAACGGAT +
Preference number: 2 (lower is better)
Translates to: YTHTHTPPPCFLGLS*AFTNHSVISNTATD
Trigger: ATCCGTTGCAGTGTTAGAAATGACACTGTGATTAGTGAAAGCCAAGCTGAGTCCCAGGAAGCAGGGAGGGGGAGTGTGTGTGTGTGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 90 bp GTCAGTACTTCATGCAGTAGGTGCCAACTCACCCGAGAGACAAATTaGATTGACACCTTGAAAGGTCGATCTTTTCCACCTTCCCCAGGT +
Preference number: 2 (lower is better)
Translates to: VSTSCSRCQLTRETN*IDTLKGRSFPPSPG
Trigger: ACCTGGGGAAGGTGGAAAAGATCGACCTTTCAAGGTGTCAATCAAATTTGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGTACTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CCA 90 bp AAACGTGACTTCCTTCAGCACTGTCATGTTCTTTGTCCACAAGATGATATCTGGGCCCCCACACAGTGTTaGTTTCTGTATGGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: KRDFLQHCHVLCPQDDIWAPTQC*FLYGWR
Trigger: CCTCCAGCCATACAGAAACCAACACTGTGTGGGGGC...CCAGATATCATCTTGTGGACAAAGAACATGACAGTGCTGAAGGAAGTCACGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CCA 90 bp TGCCTGAATTTCCCTGCCCTTCCTGACAGCCTGCCCCCAAAATTTCAGACTTGCGAAAAGCCTCCTAACTaGCTTCTCAGATTAGTTTTT +
Preference number: 2 (lower is better)
Translates to: CLNFPALPDSLPPKFQTCEKPPN*LLRLVF
Trigger: AAAAACTAATCTGAGAAGCCAGTTAGGAGGCTTTTC...GCAAGTCTGAAATTTTGGGGGCAGGCTGTCAGGAAGGGCAGGGAAATTCAGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324350.9
3UTR-3UTR CCA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCCACTTCCGCATACACTaGTGTCTTCCCCGGCAGGAT +
Preference number: 2 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFHFRIH*CLPRQD
Trigger: ATCCTGCCGGGGAAGACACCAGTGTATGCGGAAGTG...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR TCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTTGCACTCCAGCCTGGTaGCAGAGCGAGGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLCTPAW*QSEALS
Trigger: AGACAGAGCCTCGCTCTGTCACCAGGCTGGAGTGCA...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCCGTAAGGTATCTTGGTaGATCTGTACAGCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFRKVSW*ICTALA
Trigger: TGCCAAGGCTGTACAGATTCACCAAGATACCTTACG...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR GCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAACACAGAGATCCGCTaGCAGTCATTCCTGCTGAAG +
Preference number: 2 (lower is better)
Translates to: TLFFKERYQKSAKKQGITNTEIR*QSFLLK
Trigger: CTTCAGCAGGAATGACTGGCAGCGGATCTCTGTGTT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAAATGTATGTTCTGAGTaGGAGGGGAGAGACGCACTC +
Preference number: 2 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGNVCSE*EGRDAL
Trigger: GAGTGCGTCTCTCCCCTCCCACTCAGAACATACATT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR TCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCCTAAAGTTTCCCACATaGATCTGTGCAGCTCCCATG +
Preference number: 2 (lower is better)
Translates to: TLFFKERYQKSAKKQGITLKFPT*ICAAPM
Trigger: CATGGGAGCTGCACAGATTCATGTGGGAAACTTTAG...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR GCA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCACTTCATGCAGTAGGTaGCAACTCACCCGAGAGACA +
Preference number: 2 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFTSCSR*QLTRET
Trigger: TGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGT...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR GCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCTTCCAGCTGGGATATTaGCACTTCTTCCAACCCTTT +
Preference number: 2 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFFQLGY*HFFQPF
Trigger: AAAGGGTTGGAAGAAGTGGCAATATCCCAGCTGGAA...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CCA 90 bp AGCAGTTATCATCCCATAAAACATGATAGTGTGAAGGACGACTGGTACCCTGTAGTGTTGGTTTCTGTATaGCTGGAGGTGTCCTTACTC +
Preference number: 2 (lower is better)
Translates to: SSYHPIKHDSVKDDWYPVVLVSV*LEVSLL
Trigger: GAGTAAGGACACCTCCAGCCATACAGAAACCAACAC...TACAGGGTACCAGTCGTCCTTCACACTATCATGTTTTATGGGATGATAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CCA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCGAAAAGCCTCCTAACTaGCTTCTCAGATTAGTTTTT +
Preference number: 2 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSEKPPN*LLRLVF
Trigger: AAAAACTAATCTGAGAAGCCAGTTAGGAGGCTTTTC...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR TCA 90 bp TACGCGTCCAGTTACATGAGCCATTTCATCCCGAACTTTAAATTGAAACTCCTGTGCTGCCAAGCAACTTaGGGTAAAGGCATTAAAAGG +
Preference number: 2 (lower is better)
Translates to: YASSYMSHFIPNFKLKLLCCQAT*GKGIKR
Trigger: CCTTTTAATGCCTTTACCTCAAGTTGCTTGGCAGCA...CAGGAGTTTCAATTTAAAGTTCGGGATGAAATGGCTCATGTAACTGGACGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR GCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATCTGTTAAGGGCAACCTaGCTGTTCAACAGAAGAACA +
Preference number: 2 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNLLRAT*LFNRRT
Trigger: TGTTCTTCTGTTGAACAGGCAGGTTGCCCTTAACAG...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGTGTTGGTTTCTGTATaGCTGGAGGTGTCCTTACTC +
Preference number: 2 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNVLVSV*LEVSLL
Trigger: GAGTAAGGACACCTCCAGCCATACAGAAACCAACAC...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTATCAGACTTGGGGGATaGCTGGATTGGGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLIRLGG*LDWGRR
Trigger: CCTTCTCCCCCAATCCAGCCATCCCCCAAGTCTGAT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 90 bp CTTCAGTACTTGAAATTCTCATTGAAATTAATGCAGATGCCAGCTTaGTTAGCAATGAGTTGGAAAAGCCCAACTGCCTGCAACAAGGGG +
Preference number: 2 (lower is better)
Translates to: LQYLKFSLKLMQMPA*LAMSWKSPTACNKG
Trigger: CCCCTTGTTGCAGGCAGTTGGGCTTTTCCAACTCATTGCTAACAAAGCTGGCATCTGCATTAATTTCAATGAGAATTTCAAGTACTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGAGTATACTTTTCTCTaGAATACTGCGCTACTGTTC +
Preference number: 2 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFEYTFL*NTALLF
Trigger: GAACAGTAGCGCAGTATTTCAGAGAAAAGTATACTC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR GCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCACTTTCCCATTTCCTTaGCTCTCAGTGGAATACACT +
Preference number: 2 (lower is better)
Translates to: TLFFKERYQKSAKKQGITTFPFP*LSVEYT
Trigger: AGTGTATTCCACTGAGAGGCAAGGAAATGGGAAAGT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTGCAATGGTGCAGTCTTaGCTCACTGTAACTTCCGCC +
Preference number: 2 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLAMVQS*LTVTSA
Trigger: GGCGGAAGTTACAGTGAGCCAAGACTGCACCATTGC...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCTTTCCTTGGTTCCCTTaGACGAGATTCAAGACAACA +
Preference number: 2 (lower is better)
Translates to: TLFFKERYQKSAKKQGITFPWFP*TRFKTT
Trigger: TGTTGTCTTGAATCTCGTCCAAGGGAACCAAGGAAA...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCCTATTTACTGCTTCCTaGTATGGAGCAAAATTGCCC +
Preference number: 2 (lower is better)
Translates to: TLFFKERYQKSAKKQGITLFTAS*YGAKLP
Trigger: GGGCAATTTTGCTCCATACCAGGAAGCAGTAAATAG...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CCA 90 bp GGATATTGCCACTTCTTCCAACCCTTTCTGTCCTATCAGCACAAAATAATCGAGATTTCAACTCCTGTGTaGAATTGTTTCCCTCGCATG +
Preference number: 2 (lower is better)
Translates to: GYCHFFQPFLSYQHKIIEISTPV*NCFPRM
Trigger: CATGCGAGGGAAACAATTCCACACAGGAGTTGAAAT...CTCGATTATTTTGTGCTGATAGGACAGAAAGGGTTGGAAGAAGTGGCAATATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 90 bp ACTCTTATTTACAAGGGGAAACTAGGCACACAGAGATTAAACGAATaGCCTAAGGACACGGAGCAAATCAGTGGGAGACCTATTACTAAA +
Preference number: 2 (lower is better)
Translates to: TLIYKGKLGTQRLNE*PKDTEQISGRPITK
Trigger: TTTAGTAATAGGTCTCCCACTGATTTGCTCCGTGTCCTTAGGCAATTCGTTTAATCTCTGTGTGCCTAGTTTCCCCTTGTAAATAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR TCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATACGTCTTTGCTTTACTaGGACCCTAACATAGATACA +
Preference number: 2 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNTSLLY*DPNIDT
Trigger: TGTATCTATGTTAGGGTCTCAGTAAAGCAAAGACGT...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR GCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCTCTAGTCTCTGGTGTTaGCTCTTCAACATCAAACAT +
Preference number: 2 (lower is better)
Translates to: TLFFKERYQKSAKKQGITSSLWC*LFNIKH
Trigger: ATGTTTGATGTTGAAGAGGCAACACCAGAGACTAGA...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTTGGTTTCTGTATGGCTaGAGGTGTCCTTACTCAATT +
Preference number: 2 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAWFLYG*RCPYSI
Trigger: AATTGAGTAAGGACACCTCCAGCCATACAGAAACCA...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR-3UTR CCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATACGGTCTCTAATTCCTaGTCTGCAATCCATCTAAAT +
Preference number: 2 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNTVSNS*SAIHLN
Trigger: ATTTAGATGGATTGCAGACCAGGAATTAGAGACCGT...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATaGCATAATGATGCTGTGTTCCTTGATGAAGTAAACAATCTTCCT +
Preference number: 2 (lower is better)
Translates to: TSYRRPHKKQLAGFI*HNDAVFLDEVNNLP
Trigger: AGGAAGATTGTTTACTTCATCAAGGAACACAGCATCATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR CAA 90 bp CAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTaGGCTGGTTTCATATTGCATAATGATGCTGTGTTCCTTGATGAA +
Preference number: 2 (lower is better)
Translates to: QNNCDTSYRRPHKKQ*AGFILHNDAVFLDE
Trigger: TTCATCAAGGAACACAGCATCATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR-3UTR TCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGTGTCCTTACTCAATTaGCTTCACTGGAAACATACG +
Preference number: 2 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPVSLLN*LHWKHT
Trigger: CGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACAC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAGCATATATGAGTGACTaGAAATTAGGTGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGAYMSD*KLGERV
Trigger: TACTCTCTCACCTAATTTTCAGTCACTCATATATGC...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR TCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATAGAGACAAATTTGATTaGCACCTTGAAAGGTCGATC +
Preference number: 2 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNRDKFD*HLERSI
Trigger: GATCGACCTTTCAAGGTGTCAATCAAATTTGTCTCT...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR GCA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCTGGCTGGTTTCATATTaGATAATGATGCTGTGTTCC +
Preference number: 2 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFWLVSY*IMMLCS
Trigger: GGAACACAGCATCATTATGCAATATGAAACCAGCCA...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTACCACATCAACGGCATaGACAGGGTTAGTGCTGATT +
Preference number: 2 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLTTSTA*TGLVLI
Trigger: AATCAGCACTAACCCTGTCCATGCCGTTGATGTGGT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CCA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCGTTCTCTCCACAGTTTaGCCGTTTTCTAACTGTAAA +
Preference number: 2 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFVLSTV*PFSNCK
Trigger: TTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAAC...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CCA 90 bp AAACGTGACTTCCTTCAGCACTGTCATGTTCTTTGTCCACAAGATGATATCTGGAAAATCGAACTCATATaGGTGTGTAATGTCTGTATC +
Preference number: 2 (lower is better)
Translates to: KRDFLQHCHVLCPQDDIWKIELI*VCNVCI
Trigger: GATACAGACATTACACACCCATATGAGTTCGATTTT...CCAGATATCATCTTGTGGACAAAGAACATGACAGTGCTGAAGGAAGTCACGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 90 bp AAGAGTTCTAAATTAGGGTTATACTGCTACACAGGAAGGCGTTACTaGATGTCAAACCTCCCAACAATTCTTACTGAAGCTTTAAGACAT +
Preference number: 2 (lower is better)
Translates to: KSSKLGLYCYTGRRY*MSNLPTILTEALRH
Trigger: ATGTCTTAAAGCTTCAGTAAGAATTGTTGGGAGGTTTGACATCAAGTAACGCCTTCCTGTGTAGCAGTATAACCCTAATTTAGAACTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 90 bp AGCAACTTCCAAGACTTCTCTAAGTTACTGAGAATAGGTGTGCCTTaGGGTCTGGGACAACATTATCATATAAATTTAGATTACAGAGAC +
Preference number: 2 (lower is better)
Translates to: SNFQDFSKLLRIGVP*GLGQHYHINLDYRD
Trigger: GTCTCTGTAATCTAAATTTATATGATAATGTTGTCCCAGACCCAAAGGCACACCTATTCTCAGTAACTTAGAGAAGTCTTGGAAGTTGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 90 bp TTTCCTTGCCTCTCAGTGGAATACACTACAGTAAAATGTCATACATaGAGCTCCAATAATTTAGAATTGAAAACCCAGAGGATGGAATAC +
Preference number: 2 (lower is better)
Translates to: FPCLSVEYTTVKCHT*SSNNLELKTQRMEY
Trigger: GTATTCCATCCTCTGGGTTTTCAATTCTAAATTATTGGAGCTCAATGTATGACATTTTACTGTAGTGTATTCCACTGAGAGGCAAGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR GCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTAAAAAGATCACTGGTTaGTGGAACACAGAAGGTCTT +
Preference number: 2 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLKKITG*WNTEGL
Trigger: AAGACCTTCTGTGTTCCAGCAACCAGTGATCTTTTT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 72 bp AGAAGGCAGTGGCAGAAATCAGACTTGGGGGATGGCTaGATTGGGGGAGAAGGGTGTCAAACACTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: RRQWQKSDLGDG*IGGEGCQTLLL
Trigger: GAGAAGCAGTGTTTGACACCCTTCTCCCCCAATCCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 72 bp AGGCTTGCTTTAAACTCCTGGGCTCAACTATCCTCCTaGCTCATCCTCCTGAGAAGTTCGGACTACAGGTGC +
Preference number: 3 (lower is better)
Translates to: RLALNSWAQLSS*LILLRSSDYRC
Trigger: GCACCTGTAGTCCGAACTTCTCAGGAGGATGAGGCAGGAGGATAGTTGAGCCCAGGAGTTTAAAGCAAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp AGTGGCTCAGGCAAGGTCCGTCCTGTCAGTACTTCATaGAGTAGGTGCCAACTCACCCGAGAGACAAATTTG +
Preference number: 3 (lower is better)
Translates to: SGSGKVRPVSTS*SRCQLTRETNL
Trigger: CAAATTTGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGTACTGACAGGACGGACCTTGCCTGAGCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 72 bp TTAGCGCTCACCCTTTCCTTGAACACAGAGATCCGCTaGCAGTCATTCCTGCTGAAGGGCAAGTCAGGTTTT +
Preference number: 3 (lower is better)
Translates to: LALTLSLNTEIR*QSFLLKGKSGF
Trigger: AAAACCTGACTTGCCCTTCAGCAGGAATGACTGGCAGCGGATCTCTGTGTTCAAGGAAAGGGTGAGCGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp GGCAAGGTCCGTCCTGTCAGTACTTCATGCAGTAGGTaGCAACTCACCCGAGAGACAAATTTGATTGACACC +
Preference number: 3 (lower is better)
Translates to: GKVRPVSTSCSR*QLTRETNLIDT
Trigger: GGTGTCAATCAAATTTGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGTACTGACAGGACGGACCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 72 bp TACTGTCCGATTCCGTCCTCCATACTGGAGCATAGGTaGTGGAAGTACGCGTCCAGTTACATGAGCCATTTC +
Preference number: 3 (lower is better)
Translates to: YCPIPSSILEHR*WKYASSYMSHF
Trigger: GAAATGGCTCATGTAACTGGACGCGTACTTCCAGCACCTATGCTCCAGTATGGAGGACGGAATCGGACAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 72 bp ATGGAGGGCAGATGTCGTAGCACCACATCAACGGCATaGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCC +
Preference number: 3 (lower is better)
Translates to: MEGRCRSTTSTA*TGLVLIGLSNS
Trigger: GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCTACGACATCTGCCCTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 72 bp TGTCCGATTCCGTCCTCCATACTGGAGCATAGGTGCTaGAAGTACGCGTCCAGTTACATGAGCCATTTCATC +
Preference number: 3 (lower is better)
Translates to: CPIPSSILEHRC*KYASSYMSHFI
Trigger: GATGAAATGGCTCATGTAACTGGACGCGTACTTCCAGCACCTATGCTCCAGTATGGAGGACGGAATCGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR TCA 72 bp CAAGCCATCAAGTACTTCACTGCGGTCAAGCTGTACTaGTGTCAGGTAGCAGGATTTGTGGAGCCAACCAGT +
Preference number: 3 (lower is better)
Translates to: QAIKYFTAVKLY*CQVAGFVEPTS
Trigger: ACTGGTTGGCTCCACAAATCCTGCTACCTGACATCAGTACAGCTTGACCGCAGTGAAGTACTTGATGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp AATACTGCGCTACTGTTCTCTCCACAGTTTGGCCGTTTTCTAACTGTAAAGGAAGGCCCCCACACAGTGTaGGTTTCTGTATGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: NTALLFSPQFGRFLTVKEGPHTV*VSVWLE
Trigger: CTCCAGCCATACAGAAACCAACACTGTGTGGGGGCC...TTCCTTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAACAGTAGCGCAGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAGGCACGAGAATCACTaGAACCCGGGAGGCGGAGTT +
Preference number: 3 (lower is better)
Translates to: TLFFKERYQKSAKKQGITRHENH*NPGGGV
Trigger: AACTCCGCCTCCCGGGTTCAAGTGATTCTCGTGCCT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAAGCAGGAGGATAGTTaGGGCCCAGGAGTTGGAGGC +
Preference number: 3 (lower is better)
Translates to: TLFFKERYQKSAKKQGITKQEDS*GPGVGG
Trigger: GCCTCCAACTCCTGGGCCCAAACTATCCTCCTGCTT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATCATAAGGATCAGACCTaGGCCCCCACACAGTGTTGG +
Preference number: 3 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNHKDQT*APTQCW
Trigger: CCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATG...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR GCA 72 bp GCAATCCATCTAAATACTTCGGATCCATCACTGGCATaGTTAGCGCTCACCCTTTCCTTGAACACAGAGATC +
Preference number: 3 (lower is better)
Translates to: AIHLNTSDPSLA*LALTLSLNTEI
Trigger: GATCTCTGTGTTCAAGGAAAGGGTGAGCGCTAAGCATGCCAGTGATGGATCCGAAGTATTTAGATGGATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp GGTCATATCCTTCTGGAGCGGAGAAAAATGAACGCCCCACAGGTGTGTATTTCAGGTGTCCTTACTCAATaGACTTCACTGGAAACATAC +
Preference number: 3 (lower is better)
Translates to: GHILLERRKMNAPQVCISGVLTQ*TSLETY
Trigger: GTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACC...TGAAATACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCAGAAGGATATGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 72 bp TCCTGCCTCATCCTCCTGAGAAGTTCGGACTACAGGTaGAAACCACCACATCTGGCTAATATCAACAATAAT +
Preference number: 3 (lower is better)
Translates to: SCLILLRSSDYR*KPPHLANINNN
Trigger: ATTATTGTTGATATTAGCCAGATGTGGTGGTTTGCACCTGTAGTCCGAACTTCTCAGGAGGATGAGGCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp TGGTCTGTGAAACCCTTCAATATTTCTTCTCTGCACTaGCTCTGTGTGGCAAAACAAGCGATAGCCCACATT +
Preference number: 3 (lower is better)
Translates to: WSVKPFNISSLH*LCVAKQAIAHI
Trigger: AATGTGGGCTATCGCTTGTTTTGCCACACAGAGGCAGTGCAGAGAAGAAATATTGAAGGGTTTCACAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CCA 72 bp TGGGTGTGTAATGTCTGTATCAACTGTTGTTCCAGCTaGGATATTGCCACTTCTTCCAACCCTTTCTGTCCT +
Preference number: 3 (lower is better)
Translates to: WVCNVCINCCSS*DIATSSNPFCP
Trigger: AGGACAGAAAGGGTTGGAAGAAGTGGCAATATCCCAGCTGGAACAACAGTTGATACAGACATTACACACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CAA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTGGCCCCCACACAGTGTaGGTTTCTGTATGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLGPHTV*VSVWLE
Trigger: CTCCAGCCATACAGAAACCAACACTGTGTGGGGGCC...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR-3UTR CAA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAACAGGAAGGCGTTACTaGATGTCAAACCTCCCAACA +
Preference number: 3 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGTGRRY*MSNLPT
Trigger: TGTTGGGAGGTTTGACATCAAGTAACGCCTTCCTGT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATCTTTCCTTGGTTCCCTaGGACGAGATTCAAGACAAC +
Preference number: 3 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNLSLVP*DEIQDN
Trigger: GTTGTCTTGAATCTCGTCCAAGGGAACCAAGGAAAG...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCAATTTGATTGACACCTaGAAAGGTCGATCTTTTCCA +
Preference number: 3 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSNLIDT*KGRSFP
Trigger: TGGAAAAGATCGACCTTTCAAGGTGTCAATCAAATT...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CAA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCAACTCCTGTGTGGAATaGTTTCCCTCGCATGTCCCA +
Preference number: 3 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFNSCVE*FPSHVP
Trigger: TGGGACATGCGAGGGAAACAATTCCACACAGGAGTT...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR TCA 72 bp CTGCCACGATCTATAAAGGTAACTGCATCAGACACCTaGTATGACCTGCAGGTGCTCAGAATTGAATTCACA +
Preference number: 3 (lower is better)
Translates to: LPRSIKVTASDT*YDLQVLRIEFT
Trigger: TGTGAATTCAATTCTGAGCACCTGCAGGTCATATCAGGTGTCTGATGCAGTTACCTTTATAGATCGTGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp ATCCCTGTGCTGGAAAGCAGAGATGCCTCTATCAAGTaGCTTCCAAAACACTCAGTAATTCCTACTAGAATC +
Preference number: 3 (lower is better)
Translates to: IPVLESRDASIK*LPKHSVIPTRI
Trigger: GATTCTAGTAGGAATTACTGAGTGTTTTGGAAGGCACTTGATAGAGGCATCTCTGCTTTCCAGCACAGGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp CACATACGCACACCACTGCTTCCCAAAGCCTATGAATaGATCCACGTACTAGTCCACAAGAATGATCTTTAT +
Preference number: 3 (lower is better)
Translates to: HIRTPLLPKAYE*IHVLVHKNDLY
Trigger: ATAAAGATCATTCTTGTGGACTAGTACGTGGATGCATTCATAGGCTTTGGGAAGCAGTGGTGTGCGTATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CCA 72 bp AACAATCTTCCTTGTATTAACATAAGGATCAGACCTTaGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGA +
Preference number: 3 (lower is better)
Translates to: NNLPCINIRIRP*PPHSVGFCMAG
Trigger: TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR CCA 72 bp GCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTaGCTGGTTTCATATTGCATAATGATGCTGTGTTCC +
Preference number: 3 (lower is better)
Translates to: AILPIGDRTKSS*LVSYCIMMLCS
Trigger: GGAACACAGCATCATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR-3UTR CAA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGACCGCACAAAAAGCAGTaGGCTGGTTTCATATTGCAT +
Preference number: 3 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGPHKKQ*AGFILH
Trigger: ATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGG...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTAGGCAGGAGAATTGCTaGAACCCGAGAGGCGGAAGT +
Preference number: 3 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLRQENC*NPRGGS
Trigger: ACTTCCGCCTCTCGGGTTCAAGCAATTCTCCTGCCT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp AGCAGTTATCATCCCATAAAACATGATAGTGTGAAGGACGACTGGTACCCTGTATTAGTGCTGATTGGCTaGTCTAATTCCAGTGGCTCA +
Preference number: 3 (lower is better)
Translates to: SSYHPIKHDSVKDDWYPVLVLIG*SNSSGS
Trigger: TGAGCCACTGGAATTAGACAAGCCAATCAGCACTAA...TACAGGGTACCAGTCGTCCTTCACACTATCATGTTTTATGGGATGATAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR TCA 72 bp CCTTTTGTTAAACTCCCTGGGATCAAACTGTATCCATaGACTGGGTCGGACTGTCTATGCCAAAATTCTTTC +
Preference number: 3 (lower is better)
Translates to: PFVKLPGIKLYP*TGSDCLCQNSF
Trigger: GAAAGAATTTTGGCATAGACAGTCCGACCCAGTTCATGGATACAGTTTGATCCCAGGGAGTTTAACAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCTCTTTCCCAAGTATTTaGAGAGTGTCATTTACCCCC +
Preference number: 3 (lower is better)
Translates to: TLFFKERYQKSAKKQGITSFPSI*RVSFTP
Trigger: GGGGGTAAATGACACTCTCAAAATACTTGGGAAAGA...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTACCCGAGAGACAAATTaGATTGACACCTTGAAAGGT +
Preference number: 3 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVTRETN*IDTLKG
Trigger: ACCTTTCAAGGTGTCAATCAAATTTGTCTCTCGGGT...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CAA 90 bp CTGAACTACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCATTGTCTGTTAGCTTCTaGATACATCGTTGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: LNYNVGYSRLIVFLQTDALSVSF*IHRCPA
Trigger: GGCAGGGCAACGATGTATCAAGAAGCTAACAGACAA...TGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTAGTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR TCA 72 bp CTTCGTACTGGTTCTGCTTCTCTAGGTTCTGAACCTTaGCTGATATGCCAGGCTTGTAGTTTATTTGCAAAA +
Preference number: 3 (lower is better)
Translates to: LRTGSASLGSEP*LICQACSLFAK
Trigger: TTTTGCAAATAAACTACAAGCCTGGCATATCAGTCAAGGTTCAGAACCTAGAGAAGCAGAACCAGTACGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324350.9
3UTR TCA 72 bp AAGGGTATCTACAGTCATTCCCTAAAGTTTCCCACATaGATCTGTGCAGCTCCCATGATAAAGGAAGATGTT +
Preference number: 3 (lower is better)
Translates to: KGIYSHSLKFPT*ICAAPMIKEDV
Trigger: AACATCTTCCTTTATCATGGGAGCTGCACAGATTCATGTGGGAAACTTTAGGGAATGACTGTAGATACCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp CCAAAATTTCAGACTTGCCTAGCTAGCCCCTACAATTaGATAAACTCTCTCTCTATACTTCGTACTGGTTCT +
Preference number: 3 (lower is better)
Translates to: PKFQTCLASPYN*INSLSILRTGS
Trigger: AGAACCAGTACGAAGTATAGAGAGAGAGTTTATGCAATTGTAGGGGCTAGCTAGGCAAGTCTGAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324350.9
3UTR GCA 72 bp CTACAGTCATTCCCTAAAGTTTCCCACATGAATCTGTaGAGCTCCCATGATAAAGGAAGATGTTTTACTCAC +
Preference number: 3 (lower is better)
Translates to: LQSFPKVSHMNL*SSHDKGRCFTH
Trigger: GTGAGTAAAACATCTTCCTTTATCATGGGAGCTGCACAGATTCATGTGGGAAACTTTAGGGAATGACTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CCA 72 bp ATACAAATTGCGCAAATGGTAAATGTATGTTCTGAGTaGGAGGGGAGAGACGCACTCTCACAGAAAGTTATT +
Preference number: 3 (lower is better)
Translates to: IQIAQMVNVCSE*EGRDALSQKVI
Trigger: AATAACTTTCTGTGAGAGTGCGTCTCTCCCCTCCCACTCAGAACATACATTTACCATTTGCGCAATTTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCCACTGGAAACATACGTaGTATGTCAATTCATCTTTC +
Preference number: 3 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFHWKHT*YVNSSF
Trigger: GAAAGATGAATTGACATACAACGTATGTTTCCAGTG...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR-3UTR CAA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGGTGTCCTTACTCAATaGACTTCACTGGAAACATAC +
Preference number: 3 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNGVLTQ*TSLETY
Trigger: GTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACC...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR-3UTR CAA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATCAGATACATCAACATTaGAATGTCACTGGTAGGACT +
Preference number: 3 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNQIHQH*NVTGRT
Trigger: AGTCCTACCAGTGACATTCAAATGTTGATGTATCTG...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGGTACAAGAATATTATaGATCCCTCCGAGTTTAACA +
Preference number: 3 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFGTRIL*IPPSLT
Trigger: TGTTAAACTCGGAGGGATCAATAATATTCTTGTACC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CAA 90 bp AGCAGTTATCATCCCATAAAACATGATAGTGTGAAGGACGACTGGTACCCTGTACACTGGAAACATACGTaGTATGTCAATTCATCTTTC +
Preference number: 3 (lower is better)
Translates to: SSYHPIKHDSVKDDWYPVHWKHT*YVNSSF
Trigger: GAAAGATGAATTGACATACAACGTATGTTTCCAGTG...TACAGGGTACCAGTCGTCCTTCACACTATCATGTTTTATGGGATGATAACTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CAA 90 bp CTGAACTACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCACTTGACTTGAACACATaGTGTAGCCATACCCAAAAG +
Preference number: 3 (lower is better)
Translates to: LNYNVGYSRLIVFLQTDALDLNT*CSHTQK
Trigger: CTTTTGGGTATGGCTACACAATGTGTTCAAGTCAAG...TGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTAGTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR-3UTR CAA 90 bp CTGAACTACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCATCTTTAGGCACAAGTTaGACAGAGTTTGAGGAGATG +
Preference number: 3 (lower is better)
Translates to: LNYNVGYSRLIVFLQTDASLGTS*TEFEEM
Trigger: CATCTCCTCAAACTCTGTCAAACTTGTGCCTAAAGA...TGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTAGTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR TCA 72 bp TTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTaGCTTCACTGGAAACATACGTTGTATGTCAATTCA +
Preference number: 3 (lower is better)
Translates to: LVSVWLEVSLLN*LHWKHTLYVNS
Trigger: TGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR GCA 72 bp GGTAATTTAAGTAGCAAGTTACTGTTAAGGGCAACCTaGCTGTTCAACAGAAGAACATCTAAGAGGATAAGC +
Preference number: 3 (lower is better)
Translates to: GNLSSKLLLRAT*LFNRRTSKRIS
Trigger: GCTTATCCTCTTAGATGTTCTTCTGTTGAACAGGCAGGTTGCCCTTAACAGTAACTTGCTACTTAAATTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CCA 72 bp ACTAAAGATCTAAATCCATTAGGTTTCACGTGCAGATaGAATTCTGAAAGGCTAACAACAATGCCCACTGGA +
Preference number: 3 (lower is better)
Translates to: TKDLNPLGFTCR*NSERLTTMPTG
Trigger: TCCAGTGGGCATTGTTGTTAGCCTTTCAGAATTCCATCTGCACGTGAAACCTAATGGATTTAGATCTTTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATACACTGGAAACATACGTaGTATGTCAATTCATCTTTC +
Preference number: 3 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIHWKHT*YVNSSF
Trigger: GAAAGATGAATTGACATACAACGTATGTTTCCAGTG...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR TCA 72 bp AAGTGTATGGTCCTCCATGCCAGTAACCTGATACTGTaGTATAATACATGTATCAGCACTTTATGTAGACAC +
Preference number: 3 (lower is better)
Translates to: KCMVLHASNLIL*YNTCISTLCRH
Trigger: GTGTCTACATAAAGTGCTGATACATGTATTATATCACAGTATCAGGTTACTGGCATGGAGGACCATACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 72 bp TCCTTCACACAACACTCTTCTATTATCTTGAACGTCTaGATAGCTTTTCCTTTGGAGAACTCAAATGCTTCC +
Preference number: 3 (lower is better)
Translates to: SFTQHSSIILNV*IAFPLENSNAS
Trigger: GGAAGCATTTGAGTTCTCCAAAGGAAAAGCTATTCAGACGTTCAAGATAATAGAAGAGTGTTGTGTGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 72 bp TCTTGCAGGGAAGAAACAACAGGATATGTTTGTAAGTaGACACTACACCATGATAAGGCCTATGTTTCTCTT +
Preference number: 3 (lower is better)
Translates to: SCREETTGYVCK*TLHHDKAYVSL
Trigger: AAGAGAAACATAGGCCTTATCATGGTGTAGTGTTCACTTACAAACATATCCTGTTGTTTCTTCCCTGCAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 72 bp AAGTTAAGATCGAGTCCATGCTCTTCGGGCAGCAGTTaGATCCTTGTTCTGTACATCTTGTATTTTCTTTTA +
Preference number: 3 (lower is better)
Translates to: KLRSSPCSSGSS*ILVLYILYFLL
Trigger: TAAAAGAAAATACAAGATGTACAGAACAAGGATTCAACTGCTGCCCGAAGAGCATGGACTCGATCTTAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR GCA 72 bp AGAGAAACTAAAGATCTAAATCCATTAGGTTTCACGTaGAGATGGAATTCTGAAAGGCTAACAACAATGCCC +
Preference number: 3 (lower is better)
Translates to: RETKDLNPLGFT*RWNSERLTTMP
Trigger: GGGCATTGTTGTTAGCCTTTCAGAATTCCATCTGCACGTGAAACCTAATGGATTTAGATCTTTAGTTTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp AAGACTGCAACATATTCTAGCTGTATCGAAGTCGTTTaGTTCTTGAATTTCATAAAAATCACTGCCCTTGGC +
Preference number: 3 (lower is better)
Translates to: KTATYSSCIEVV*FLNFIKITALG
Trigger: GCCAAGGGCAGTGATTTTTATGAAATTCAAGAAGCAAACGACTTCGATACAGCTAGAATATGTTGCAGTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CCA 72 bp GGTGAATTTTACCCGATGAGAATCAGTCAGAGGTCTTaGTTGCTCATCAATATTATGAATATCAAGAACTTC +
Preference number: 3 (lower is better)
Translates to: GEFYPMRISQRS*LLINIMNIKNF
Trigger: GAAGTTCTTGATATTCATAATATTGATGAGCAACCAAGACCTCTGACTGATTCTCATCGGGTAAAATTCACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR TCA 72 bp AGCAGTCAGATTACACTGCAATGGTCATATTACCATTaGGTCCCCCAAACACTAAAGAAAGACATTATTTTT +
Preference number: 3 (lower is better)
Translates to: SSQITLQWSYYH*VPQTLKKDIIF
Trigger: AAAAATAATGTCTTTCTTTAGTGTTTGGGGGACTCAATGGTAATATGACCATTGCAGTGTAATCTGACTGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp CAGTTTCTACAGATTCTGACAATAAAGAGTCACGTATaGAACATTTTTGCAGTCTTTCCTTCTTTGGTTCTA +
Preference number: 3 (lower is better)
Translates to: QFLQILTIKSHV*NIFAVFPSLVL
Trigger: TAGAACCAAAGAAGGAAAGACTGCAAAAATGTTGCATACGTGACTCTTTATTGTCAGAATCTGTAGAAACTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR TCA 72 bp AATATTGTAAGTGTATGGTCCTCCATGCCAGTAACCTaGTACTGTGATATAATACATGTATCAGCACTTTAT +
Preference number: 3 (lower is better)
Translates to: NIVSVWSSMPVT*YCDIIHVSALY
Trigger: ATAAAGTGCTGATACATGTATTATATCACAGTATCAGGTTACTGGCATGGAGGACCATACACTTACAATATT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR GCA 72 bp GAACGTCTGAATAGCTTTTCCTTTGGAGAACTCAAATaGTTCCGCAAACATTATCTTATTCTTACAACAATT +
Preference number: 3 (lower is better)
Translates to: ERLNSFSFGELK*FRKHYLILTTI
Trigger: AATTGTTGTAAGAATAAGATAATGTTTGCGGAAGCATTTGAGTTCTCCAAAGGAAAAGCTATTCAGACGTTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CCA 72 bp GATACTTTACTGCATAAAAGCTTTCCTTGGTTCCCTTaGACGAGATTCAAGACAACAACTAACATTATTTTT +
Preference number: 3 (lower is better)
Translates to: DTLLHKSFPWFP*TRFKTTTNIIF
Trigger: AAAAATAATGTTAGTTGTTGTCTTGAATCTCGTCCAAGGGAACCAAGGAAAGCTTTTATGCAGTAAAGTATC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGAACGGAGCCCGCCACTaGCGGCAAGGAGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLNGARH*RQGGGP
Trigger: CGGGCCGCCTCCTTGCCGCCAGTGGCGGGCTCCGTT...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAACCATGAGTAGGGGCTaGGCCCCAGCGGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGTMSRG*APAGPA
Trigger: CGCAGGACCCGCTGGGGCCCAGCCCCTACTCATGGT...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCAACGGAGCCCGCCACTaGCGGCAAGGAGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFNGARH*RQGGGP
Trigger: CGGGCCGCCTCCTTGCCGCCAGTGGCGGGCTCCGTT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGCCTCCTAACGGAGCCCGCCACTaGCGGCAAGGAGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: PTLDHHHLLPELVIEKPPNGARH*RQGGGP
Trigger: CGGGCCGCCTCCTTGCCGCCAGTGGCGGGCTCCGTT...AGGAGGCTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAAACGGAGCCCGCCACTaGCGGCAAGGAGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETNGARH*RQGGGP
Trigger: CGGGCCGCCTCCTTGCCGCCAGTGGCGGGCTCCGTT...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp CAGGTTGTGCTTTGTAGAAGGCAGTGGCAGAAATCAGACTTGGGGGATGGCTGGAGGCCAAGTCCTGGATaGTCTCCTGTCGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: QVVLCRRQWQKSDLGDGWRPSPG*SPVGVS
Trigger: AGAGACCCCGACAGGAGATCATCCAGGACTTGGCCT...CCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAGCACAACCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp CCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGCCTCCTACTGGAGCCGGCGGGTaGAGGACCCCGAACTGCCGC +
Preference number: 4 (lower is better)
Translates to: PTLDHHHLLPELVIEKPPTGAGG*RTPNCR
Trigger: GCGGCAGTTCGGGGTCCTTCACCCGCCGGCTCCAGT...AGGAGGCTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp TGCCTGAATTTCCCTGCCCTTCCTGACAGCCTGCCCCCAAAATTTCAGACTTGCGCTTCAGCCCATGCCTaGATTTCCCTGCCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CLNFPALPDSLPPKFQTCASAHA*ISLPFL
Trigger: CAGGAAGGGCAGGGAAATTCAGGCATGGGCTGAAGC...GCAAGTCTGAAATTTTGGGGGCAGGCTGTCAGGAAGGGCAGGGAAATTCAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR GCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGTCCCGTCCGGAAGTTaGATCGCCCGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFVPSGS*IARGRR
Trigger: TCGGCGGCCGCGGGCGATGCAACTTCCGGACGGGAC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GAGATCAGGTCTCACTATGTTGTTCAGCCTGATCGCAAACTCCTAATCTCAAGTCCGAGCCGAGCCCGCTaGGGTAGGGCCACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: EIRSHYVVQPDRKLLISSPSRAR*GRATLL
Trigger: AAGGAGGGTGGCCCTACCCCAGCGGGCTCGGCTCGG...ACTTGAGATTAGGAGTTTGCGATCAGGCTGAACAACATAGTGAGACCTGATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAGCACTCCGAAAGCTCTaGGCCGGAAGAGTCGCGGAC +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGALRKL*AGRVAD
Trigger: GTCCGCGACTCTTCCGGCCCAGAGCTTTCGGAGTGC...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AAACGTGACTTCCTTCAGCACTGTCATGTTCTTTGTCCACAAGATGATATCTGGGTCCCGTCCGGAAGTTaGATCGCCCGCGGCCGCCGA +
Preference number: 4 (lower is better)
Translates to: KRDFLQHCHVLCPQDDIWVPSGS*IARGRR
Trigger: TCGGCGGCCGCGGGCGATGCAACTTCCGGACGGGAC...CCAGATATCATCTTGTGGACAAAGAACATGACAGTGCTGAAGGAAGTCACGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTACCATGAGTAGGGGCTaGGCCCCAGCGGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGTMSRG*APAGPA
Trigger: CGCAGGACCCGCTGGGGCCCAGCCCCTACTCATGGT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGCCTCCTACCATGAGTAGGGGCTaGGCCCCAGCGGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: PTLDHHHLLPELVIEKPPTMSRG*APAGPA
Trigger: CGCAGGACCCGCTGGGGCCCAGCCCCTACTCATGGT...AGGAGGCTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCAAGCATGGCTGGCCCTaGATGGGCATCCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSKHGWP*MGIPAS
Trigger: GGATGCAGGGATGCCCATCCAGGGCCAGCCATGCTT...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGGCGACGGCTTCCCCTaGGCAACCGCACTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETGDGFP*ATALRK
Trigger: CTTTCGGAGTGCGGTTGCTCAGGGGAAGCCGTCGCC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GAGATCAGGTCTCACTATGTTGTTCAGCCTGATCGCAAACTCCTAATCTCAAGTGGCGACGGCTTCCCCTaGGCAACCGCACTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: EIRSHYVVQPDRKLLISSGDGFP*ATALRK
Trigger: CTTTCGGAGTGCGGTTGCTCAGGGGAAGCCGTCGCC...ACTTGAGATTAGGAGTTTGCGATCAGGCTGAACAACATAGTGAGACCTGATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTGGCGACGGCTTCCCCTaGGCAACCGCACTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGGDGFP*ATALRK
Trigger: CTTTCGGAGTGCGGTTGCTCAGGGGAAGCCGTCGCC...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AGCCCATGCCTGAATTTCCCTGCCCTTCCTGACAGCCTGCCCCCAAAATTTCAGACTCCTAATCTCAAGTaGTCCTCCCACTTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPCLNFPALPDSLPPKFQTPNLK*SSHFGL
Trigger: GAGGCCAAAGTGGGAGGATCACTTGAGATTAGGAGT...CTGAAATTTTGGGGGCAGGCTGTCAGGAAGGGCAGGGAAATTCAGGCATGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACACTGGTCTCCAACTCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETLVSNS*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGAGTTGGAGACCAG...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AGCCCATGCCTGAATTTCCCTGCCCTTCCTGACAGCCTGCCCCCAAAATTTCAGCCCTTCCTGACAGCCTaGCCCCAAAATTTCAGACTT +
Preference number: 4 (lower is better)
Translates to: SPCLNFPALPDSLPPKFQPFLTA*PQNFRL
Trigger: AAGTCTGAAATTTTGGGGGCAGGCTGTCAGGAAGGG...CTGAAATTTTGGGGGCAGGCTGTCAGGAAGGGCAGGGAAATTCAGGCATGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAACCATGAGTAGGGGCTaGGCCCCAGCGGGTCCTGCG +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGTMSRG*APAGPA
Trigger: CGCAGGACCCGCTGGGGCCCAGCCCCTACTCATGGT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp ACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTaGTCTAATTCCAGTGGCTCAGGCAAGGTCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TSTAWTGLVLIG*SNSSGSGKVRP
Trigger: AGGACGGACCTTGCCTGAGCCACTGGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 72 bp GTTGTGCTTTGTAGAAGGCAGTGGCAGAAATCAGACTaGGGGGATGGCTGGATTGGGGGAGAAGGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: VVLCRRQWQKSD*GDGWIGGEGCQ
Trigger: TTGACACCCTTCTCCCCCAATCCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAGCACAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp GGATATTGCCACTTCTTCCAACCCTTTCTGTCCTATCAGCACAAAATAATCGAGGGCGACGGCTTCCCCTaGGCAACCGCACTCCGAAAG +
Preference number: 4 (lower is better)
Translates to: GYCHFFQPFLSYQHKIIEGDGFP*ATALRK
Trigger: CTTTCGGAGTGCGGTTGCTCAGGGGAAGCCGTCGCC...CTCGATTATTTTGTGCTGATAGGACAGAAAGGGTTGGAAGAAGTGGCAATATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp CTGGAGCGGAGAAAAATGAACGCCCCACAGGTGTGTATTTCATGGAGGGCAGATTGGAGCGGAGAAAAATaGACGCCCCACAGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LERRKMNAPQVCISWRADWSGEK*TPHRCV
Trigger: TACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCA...ATCTGCCCTCCATGAAATACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp CAGGTTGTGCTTTGTAGAAGGCAGTGGCAGAAATCAGACTTGGGGGATGGCTGGACTTCATGCAGTAGGTaGCAACTCACCCGAGAGACA +
Preference number: 4 (lower is better)
Translates to: QVVLCRRQWQKSDLGDGWTSCSR*QLTRET
Trigger: TGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGT...CCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAGCACAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp TGCCTGAATTTCCCTGCCCTTCCTGACAGCCTGCCCCCAAAATTTCAGACTTGCATCTACCCCTGTAGTTaGCACAGGAAGTGGATTGGC +
Preference number: 4 (lower is better)
Translates to: CLNFPALPDSLPPKFQTCIYPCS*HRKWIG
Trigger: GCCAATCCACTTCCTGTGGCAACTACAGGGGTAGAT...GCAAGTCTGAAATTTTGGGGGCAGGCTGTCAGGAAGGGCAGGGAAATTCAGGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR GCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTGGGATCTCGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGGISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCCC...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGATTCCATTCATGGAGCTaGGGGGAGTGCTTCGAGGGA +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGFHSWS*GECFEG
Trigger: TCCCTCGAAGCACTCCCCCCAGCTCCATGAATGGAA...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGACACTTCCGCATACACTaGTGTCTTCCCCGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGHFRIH*CLPRQD
Trigger: ATCCTGCCGGGGAAGACACCAGTGTATGCGGAAGTG...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGCCTCCTGCACTCCGAAAGCTCTaGGCCGGAAGAGTCGCGGAC +
Preference number: 4 (lower is better)
Translates to: PTLDHHHLLPELVIEKPPALRKL*AGRVAD
Trigger: GTCCGCGACTCTTCCGGCCCAGAGCTTTCGGAGTGC...AGGAGGCTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGACTCCTGACCTCAGGTaGTCTGCTCACCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLTPDLR*SAHLSC
Trigger: GCAGCTGAGGTGAGCAGATCACCTGAGGTCAGGAGT...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAAAAAGCCCAACTGCCTaGAACAAGGGGAGGTTGGCA +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGKSPTA*NKGRLA
Trigger: TGCCAACCTCCCCTTGTTGCAGGCAGTTGGGCTTTT...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGTCATATCCTTCTGGAGCGGAGAAAAATGAACGCCCCACAGGTGTGTATTTCATCCATCACCAGCAGGTaGATGAGTGACATCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GHILLERRKMNAPQVCISSITSR*MSDIGS
Trigger: GGAGCCGATGTCACTCATCCACCTGCTGGTGATGGA...TGAAATACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCAGAAGGATATGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp CAGGTTGTGCTTTGTAGAAGGCAGTGGCAGAAATCAGACTTGGGGGATGGCTGGCAGGTGTGTATTTCATaGAGGGCAGATGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: QVVLCRRQWQKSDLGDGWQVCIS*RADVVA
Trigger: TGCTACGACATCTGCCCTCCATGAAATACACACCTG...CCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAGCACAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGCAGGCTGGAGTGCAATaGTGGGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLQAGVQ*WDLGSL
Trigger: CAGTGAGCCGAGATCCCACCATTGCACTCCAGCCTG...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGATGCACTCCAGCCTGGTaGCAGAGCGAGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGCTPAW*QSEALS
Trigger: AGACAGAGCCTCGCTCTGTCACCAGGCTGGAGTGCA...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCCTGGTCACGAACCCCTaGCCTCAGGTGGTCTGCCTG +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFLVTNP*PQVVCL
Trigger: CAGGCAGACCACCTGAGGTCAGGGGTTCGTGACCAG...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATCCGAGAGGCGGAAGTTaGAGTGAGCCGAGATCTCGC +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNPRGGS*SEPRSR
Trigger: GCGAGATCTCGGCTCACTGCAACTTCCGCCTCTCGG...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCGCGATCTTGGCTCACTaGAACCTCCGCCTCCCGAGT +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITAILAH*NLRLPS
Trigger: ACTCGGGAGGCGGAGGTTGCAGTGAGCCAAGATCGC...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTCTAGCAGGATTCTCCTaGCTCAGCCTCAGGCGCCTG +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVLAGFS*LSLRRL
Trigger: CAGGCGCCTGAGGCTGAGGCAGGAGAATCCTGCTAG...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATCTTCAGGACATTTTaGAGGCGGCCCCACCCTCCC +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFIFRTF*RRPHPP
Trigger: GGGAGGGTGGGGCCGCCTGCAAAATGTCCTGAAGAT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCATGTCCCATACTCCATaGCTCGGTGTTGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSMSHTP*LGVATV
Trigger: GACAGTAGCAACACCGAGCCATGGAGTATGGGACAT...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAAAGCATGGCTGGCCCTaGATGGGCATCCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGKHGWP*MGIPAS
Trigger: GGATGCAGGGATGCCCATCCAGGGCCAGCCATGCTT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGTCCATCACCAGCAGGTaGATGAGTGACATCGGCTCC +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLSITSR*MSDIGS
Trigger: GGAGCCGATGTCACTCATCCACCTGCTGGTGATGGA...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CAGGTTGTGCTTTGTAGAAGGCAGTGGCAGAAATCAGACTTGGGGGATGGCTGGTCTGAACTCTTACTGTaGCACAGTATCTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QVVLCRRQWQKSDLGDGWSELLL*HSICLG
Trigger: ACCCAAGCAGATACTGTGCCACAGTAAGAGTTCAGA...CCAGCCATCCCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAGCACAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCCTTGGCAAGAGCTTGTaGATCTCGCCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSLGKSL*ISPIAL
Trigger: CAAAGCAATGGGCGAGATCCACAAGCTCTTGCCAAG...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp AGCCCATGCCTGAATTTCCCTGCCCTTCCTGACAGCCTGCCCCCAAAATTTCAGCTCTATACTTCGTACTaGTTCTGCTTCTCTAGGTTC +
Preference number: 4 (lower is better)
Translates to: SPCLNFPALPDSLPPKFQLYTSY*FCFSRF
Trigger: GAACCTAGAGAAGCAGAACCAGTACGAAGTATAGAG...CTGAAATTTTGGGGGCAGGCTGTCAGGAAGGGCAGGGAAATTCAGGCATGGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACACCCCTCCCTGCTTCCTaGGACTCAGCTTGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETPLPAS*DSAWLS
Trigger: TGAAAGCCAAGCTGAGTCCCAGGAAGCAGGGAGGGG...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGACCATGTTGGCCAGGCTaGTCACGAACCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGPCWPG*SRTPDL
Trigger: GAGGTCAGGGGTTCGTGACCAGCCTGGCCAACATGG...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAGGGGTTTCGCCATGTTaGCCAGGCTGGTCACGAACC +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGGVSPC*PGWSRT
Trigger: GGTTCGTGACCAGCCTGGCCAACATGGCGAAACCCC...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCAGCCTCCCGAGTAGCTaGGATTACAGGCACCCTCCA +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFSLPSS*DYRHPP
Trigger: TGGAGGGTGCCTGTAATCCCAGCTACTCGGGAGGCT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGGGGGATGGCTGGATTaGGGGAGAAGGGTGTCAAAC +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETGGWLD*GRRVSN
Trigger: GTTTGACACCCTTCTCCCCCAATCCAGCCATCCCCC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGATCAGACTTGGGGGATaGCTGGATTGGGGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLIRLGG*LDWGRR
Trigger: CCTTCTCCCCCAATCCAGCCATCCCCCAAGTCTGAT...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 72 bp ACACACACTCCCCCTCCCTGCTTCCTGGGACTCAGCTaGGCTTTCACTAATCACAGTGTCATTTCTAACACT +
Preference number: 4 (lower is better)
Translates to: THTPPPCFLGLS*AFTNHSVISNT
Trigger: AGTGTTAGAAATGACACTGTGATTAGTGAAAGCCAAGCTGAGTCCCAGGAAGCAGGGAGGGGGAGTGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCCTTTGTCCTGAAACGTaGCTTCCTTCAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSLCPET*LPSALS
Trigger: TGACAGTGCTGAAGGAAGTCACGTTTCAGGACAAAG...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCCGTAAGGTATCTTGGTaGATCTGTACAGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSRKVSW*ICTALA
Trigger: TGCCAAGGCTGTACAGATTCACCAAGATACCTTACG...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGACAGGAAGGCGTTACTTaGTGTCAAACCTCCCAACAA +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGQEGVT*CQTSQQ
Trigger: TTGTTGGGAGGTTTGACATCAAGTAACGCCTTCCTG...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGCCTGGGCAACAGAGTaGGACCCTGACTCAGAACAA +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETAWATE*DPDSEQ
Trigger: TTGTTCTGAGTCAGGGTCTCACTCTGTTGCCCAGGC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GGTCATATCCTTCTGGAGCGGAGAAAAATGAACGCCCCACAGGTGTGTATTTCACTGTGGCACAGTATCTaGTTGGGTGTGCATCCATAC +
Preference number: 4 (lower is better)
Translates to: GHILLERRKMNAPQVCISLWHSI*LGVHPY
Trigger: GTATGGATGCACACCCAAGCAGATACTGTGCCACAG...TGAAATACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCAGAAGGATATGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAAAGCATGGCTGGCCCTaGATGGGCATCCCTGCATCC +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIKHGWP*MGIPAS
Trigger: GGATGCAGGGATGCCCATCCAGGGCCAGCCATGCTT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CTCTTACCTGAACTAGTGATTGAAAAGCCTCCTAACTGGCTTCTCAGATTAGTTAAAACGGCACAGGACTaGAGCCGGCGGGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LLPELVIEKPPNWLLRLVKTAQD*SRRVKD
Trigger: GTCCTTCACCCGCCGGCTCCAGTCCTGTGCCGTTTT...AACTAATCTGAGAAGCCAGTTAGGAGGCTTTTCAATCACTAGTTCAGGTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATCTTCAGAGGCTGAGGTaGGAGGATAGCCTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNLQRLR*EDSLSP
Trigger: TGGGCTCAGGCTATCCTCCCACCTCAGCCTCTGAAG...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCCCATATTGGGCAGGCTaGTCTCCAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFPYWAG*SPTPDL
Trigger: GAGGTCAGGAGTTGGAGACCAGCCTGCCCAATATGG...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGACTTGCTTTAAACTCCTaGGCTCAACTATCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGLALNS*AQLSSC
Trigger: GCAGGAGGATAGTTGAGCCCAGGAGTTTAAAGCAAG...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGATGCGGGTACTTCAGCTaGAGAGTATACTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGCGYFS*RVYFSL
Trigger: CAGAGAAAAGTATACTCTTCAGCTGAAGTACCCGCA...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCCAGCAGGTGGATGAGTaGCATCGGCTCCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFQQVDE*HRLPKR
Trigger: TCTTTTTGGGAGCCGATGTCACTCATCCACCTGCTG...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCACCAGCAGGTGGATaGGTGACATCGGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVSPAGG*VTSAPK
Trigger: TTTGGGAGCCGATGTCACTCATCCACCTGCTGGTGA...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCTCCTGTCGGGGTCTCTaGACTCTTACTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITSCRGL*TLTVAQ
Trigger: CTGTGCCACAGTAAGAGTTCAGAGACCCCGACAGGA...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGATATTGCCACTTCTTCCAACCCTTTCTGTCCTATCAGCACAAAATAATCGAGTCCTGTCGGGGTCTCTaGACTCTTACTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GYCHFFQPFLSYQHKIIESCRGL*TLTVAQ
Trigger: CTGTGCCACAGTAAGAGTTCAGAGACCCCGACAGGA...CTCGATTATTTTGTGCTGATAGGACAGAAAGGGTTGGAAGAAGTGGCAATATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTAGGCCAAGTCCTGGATaGTCTCCTGTCGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLARPSPG*SPVGVS
Trigger: AGAGACCCCGACAGGAGATCATCCAGGACTTGGCCT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGGTGGGAGGATAGCCTaGGCCCAGGAGTTTGAAGTT +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVGGRIA*AQEFEV
Trigger: AACTTCAAACTCCTGGGCTCAGGCTATCCTCCCACC...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGATGAGGAGGGAGGTTTaGGAGTCCCATCATTTTGCC +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLMRREV*ESHHFA
Trigger: GGCAAAATGATGGGACTCTCAAACCTCCCTCCTCAT...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCATTTCTTTGGGCCCCTaGGCAGTTGAAGTTAAGATC +
Preference number: 4 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSISLGP*AVEVKI
Trigger: GATCTTAACTTCAACTGCTCAGGGGCCCAAAGAAAT...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGACTGAATTACAGGTTGTaGTTTGTAGAAGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGLNYRL*FVEGSG
Trigger: GCCACTGCCTTCTACAAAGCACAACCTGTAATTCAG...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAGTATCTGCTTGGGTGTaGATCCATACTACCTACAAC +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGVSAWV*IHTTYN
Trigger: GTTGTAGGTAGTATGGATGCACACCCAAGCAGATAC...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGTGGATCTCGCCCATTaGTTTGTCCTGAAACGTGAC +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLVDLAH*FVLKRD
Trigger: GTCACGTTTCAGGACAAAGCAATGGGCGAGATCCAC...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATAGGTTCAAGCAATCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNRFKQS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGATTGCTTGAACCT...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTACGATCTTGGCTCACTaGATCCTCCGCCACCACACC +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLATILAH*ILRHHT
Trigger: GGTGTGGTGGCGGAGGATGCAGTGAGCCAAGATCGT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTCCACCCAGGCTGGAGTaGAATGGTGGGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAPPRLE*NGGISA
Trigger: AGCCGAGATCCCACCATTGCACTCCAGCCTGGGTGG...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGCTCACTGCAACCTCTaGCACCTGGGTCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVAHCNL*HLGPSN
Trigger: ATTGCTTGGACCCAGGTGGCAGAGGTTGCAGTGAGC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGATTCCTCTTGTCTATCTaGTGCAGATCTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGFLLSI*CRSCCC
Trigger: GCAACAGCAAGATCTGCACCAGATAGACAAGAGGAA...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTCACTTCCGCATACACTaGTGTCTTCCCCGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVHFRIH*CLPRQD
Trigger: ATCCTGCCGGGGAAGACACCAGTGTATGCGGAAGTG...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATATGGAGGCCAAGTCCTaGATGATCTCCTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNMEAKS*MISCRG
Trigger: ACCCCGACAGGAGATCATCCAGGACTTGGCCTCCAT...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGCTTGGCAAGAGCTTGTaGATCTCGCCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLLGKSL*ISPIAL
Trigger: CAAAGCAATGGGCGAGATCCACAAGCTCTTGCCAAG...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGCCCCCACACAGTGTTaGTTTCTGTATGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVAPTQC*FLYGWR
Trigger: CCTCCAGCCATACAGAAACCAACACTGTGTGGGGGC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGATAAGGATCAGACCTTaGCCCCCACACAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLIRIRP*PPHSVG
Trigger: ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTAT...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AGCCCATGCCTGAATTTCCCTGCCCTTCCTGACAGCCTGCCCCCAAAATTTCAGGAAAAGCCTCCTAACTaGCTTCTCAGATTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SPCLNFPALPDSLPPKFQEKPPN*LLRLVF
Trigger: AAAAACTAATCTGAGAAGCCAGTTAGGAGGCTTTTC...CTGAAATTTTGGGGGCAGGCTGTCAGGAAGGGCAGGGAAATTCAGGCATGGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAGCAACCTCCGCCTCCTaGGTTCCAGACTACCTTGTC +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIATSAS*VPDYLV
Trigger: GACAAGGTAGTCTGGAACCCAGGAGGCGGAGGTTGC...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAATTCAGCCTGTGTGCTaGATATCTTGCAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGIQPVC*ISCREE
Trigger: TTCTTCCCTGCAAGATATCCAGCACACAGGCTGAAT...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAGCAACCTCTGCCACCTaGGTCCAAGCAATTCTCCCA +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGATSAT*VQAILP
Trigger: TGGGAGAATTGCTTGGACCCAGGTGGCAGAGGTTGC...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp CTGGAGCGGAGAAAAATGAACGCCCCACAGGTGTGTATTTCATGGAGGGCAGATAGAGACAAATTTGATTaGCACCTTGAAAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: LERRKMNAPQVCISWRADRDKFD*HLERSI
Trigger: GATCGACCTTTCAAGGTGTCAATCAAATTTGTCTCT...ATCTGCCCTCCATGAAATACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp AGGTGCCAACTCACCCGAGAGACAAATTTGATTGACACCTTGAAAGGTCGATCTTGTCTGTTAGCTTCTTaGTACATCGTTGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RCQLTRETNLIDTLKGRSCLLAS*YIVALP
Trigger: TGGCAGGGCAACGATGTATCAAGAAGCTAACAGACA...AGATCGACCTTTCAAGGTGTCAATCAAATTTGTCTCTCGGGTGAGTTGGCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATCACCAGCAGGTGGATaGGTGACATCGGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCISPAGG*VTSAPK
Trigger: TTTGGGAGCCGATGTCACTCATCCACCTGCTGGTGA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTCACCAGCAGGTGGATaGGTGACATCGGCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFSPAGG*VTSAPK
Trigger: TTTGGGAGCCGATGTCACTCATCCACCTGCTGGTGA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp TTAATCCTTCCTCTCCATCCCACATTAGACCATCACCATCTCTTACCTGAACTATGGAGCGGAGAAAAATaGACGCCCCACAGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LILPLHPTLDHHHLLPELWSGEK*TPHRCV
Trigger: TACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCA...TAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAGAGGAAGGATTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATTGGAGCGGAGAAAAATaGACGCCCCACAGGTGTGTA +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNWSGEK*TPHRCV
Trigger: TACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCA...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTCGCTCACCCTTTCCTTaGACACAGAGATCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIARSPFP*TQRSAA
Trigger: GGCAGCGGATCTCTGTGTTCAAGGAAAGGGTGAGCG...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATACTGGTCTCGAACTCCTaGCCTCAGGTAATCAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCILVSNS*PQVISL
Trigger: CAGGCTGATTACCTGAGGTCAGGAGTTCGAGACCAG...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAACTGCATCAGACACCTaGTATGACCTGCAGGTGCTC +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGTASDT*YDLQVL
Trigger: GAGCACCTGCAGGTCATATCAGGTGTCTGATGCAGT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GGTCATATCCTTCTGGAGCGGAGAAAAATGAACGCCCCACAGGTGTGTATTTCACTGAATTACAGGTTGTaGTTTGTAGAAGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GHILLERRKMNAPQVCISLNYRL*FVEGSG
Trigger: GCCACTGCCTTCTACAAAGCACAACCTGTAATTCAG...TGAAATACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCAGAAGGATATGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTATACTGGAGCATAGGTaGTGGAAGTACGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGILEHR*WKYASS
Trigger: ACTGGACGCGTACTTCCAGCACCTATGCTCCAGTAT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTCCATGGCTCGGTGTTaGTACTGTCCGATTCCGTCC +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFSMARC*YCPIPS
Trigger: GGACGGAATCGGACAGTAGCAACACCGAGCCATGGA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACACTGTGGCACAGTATCTaGTTGGGTGTGCATCCATAC +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETLWHSI*LGVHPY
Trigger: GTATGGATGCACACCCAAGCAGATACTGTGCCACAG...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AAGGTCCGTCCTGTCAGTACTTCATGCAGTAGGTGCCAACTCACCCGAGAGACAATATCTGGCTCTAAATaGTACCAGGTGAGCATAATA +
Preference number: 4 (lower is better)
Translates to: KVRPVSTSCSRCQLTRETISGSK*YQVSII
Trigger: TATTATGCTCACCTGGTAGCATTTAGAGCCAGATAT...TGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGTACTGACAGGACGGACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTTTGCCCAGGCTGGAGTaGAATGGTGCAGTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLALPRLE*NGAVLA
Trigger: AGCCAAGACTGCACCATTGCACTCCAGCCTGGGCAA...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGCTGGAAAGCAGAGATaGCTCTATCAAGTGCCTTCC +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETAGKQR*LYQVPS
Trigger: GGAAGGCACTTGATAGAGGCATCTCTGCTTTCCAGC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAAACACAGAGATCCGCTaGCAGTCATTCCTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETNTEIR*QSFLLK
Trigger: CTTCAGCAGGAATGACTGGCAGCGGATCTCTGTGTT...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTGGAAAAGCCCAACTaGCTGCAACAAGGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGLEKPN*LQQGEV
Trigger: AACCTCCCCTTGTTGCAGGCAGTTGGGCTTTTCCAA...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTCTGGAGCATAGGTGCTaGAAGTACGCGTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVLEHRC*KYASSY
Trigger: GTAACTGGACGCGTACTTCCAGCACCTATGCTCCAG...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAATTTCAACTCCTGTGTaGAATTGTTTCCCTCGCATG +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGISTPV*NCFPRM
Trigger: CATGCGAGGGAAACAATTCCACACAGGAGTTGAAAT...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTTCCATCACCAGCAGGTaGATGAGTGACATCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLASITSR*MSDIGS
Trigger: GGAGCCGATGTCACTCATCCACCTGCTGGTGATGGA...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTATGGAGGCCAAGTCCTaGATGATCTCCTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAMEAKS*MISCRG
Trigger: ACCCCGACAGGAGATCATCCAGGACTTGGCCTCCAT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTCTTGGCAAGAGCTTGTaGATCTCGCCCATTGCTTTG +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGLGKSL*ISPIAL
Trigger: CAAAGCAATGGGCGAGATCCACAAGCTCTTGCCAAG...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCGCCCCCACACAGTGTTaGTTTCTGTATGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFAPTQC*FLYGWR
Trigger: CCTCCAGCCATACAGAAACCAACACTGTGTGGGGGC...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAGCACTCCGAAAGCTCTaGGCCGGAAGAGTCGCGGAC +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRALRKL*AGRVAD
Trigger: GTCCGCGACTCTTCCGGCCCAGAGCTTTCGGAGTGC...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCGCAATGGTGCAGTCTTaGCTCACTGTAACTTCCGCC +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITAMVQS*LTVTSA
Trigger: GGCGGAAGTTACAGTGAGCCAAGACTGCACCATTGC...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGGGGTTTCAGCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVGVSAC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGCTGAAACCCC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATAGCAGGAGGATAGTTTaGGCCCAGGAGTTGGAGGCT +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNSRRIV*AQELEA
Trigger: AGCCTCCAACTCCTGGGCCCAAACTATCCTCCTGCT...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp TACAAGGGGAAACTAGGCACACAGAGATTAAACGAATaGCCTAAGGACACGGAGCAAATCAGTGGGAGACCT +
Preference number: 4 (lower is better)
Translates to: YKGKLGTQRLNE*PKDTEQISGRP
Trigger: AGGTCTCCCACTGATTTGCTCCGTGTCCTTAGGCAATTCGTTTAATCTCTGTGTGCCTAGTTTCCCCTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp TGCCTCTGTGTGGCAAAACAAGCGATAGCCCACATTTaGATTTCAACTCCTGTGTGGAATTGTTTCCCTCGC +
Preference number: 4 (lower is better)
Translates to: CLCVAKQAIAHI*ISTPVWNCFPR
Trigger: GCGAGGGAAACAATTCCACACAGGAGTTGAAATCAAAATGTGGGCTATCGCTTGTTTTGCCACACAGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 72 bp TGGATGAGTGACATCGGCTCCCAAAAAGATCACTGGTaGCTGGAACACAGAAGGTCTTTGATGAGGTACAAG +
Preference number: 4 (lower is better)
Translates to: WMSDIGSQKDHW*LEHRRSLMRYK
Trigger: CTTGTACCTCATCAAAGACCTTCTGTGTTCCAGCAACCAGTGATCTTTTTGGGAGCCGATGTCACTCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGACTCATTGTTCCACAATaGGTCACTTCAACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGLIVPQ*VTSTFK
Trigger: TTTGAAGGTTGAAGTGACTCATTGTGGAACAATGAG...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTACGCGTCCAGTTACATaGGCCATTTCATCCCGAACT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVTRPVT*AISSRT
Trigger: AGTTCGGGATGAAATGGCTCATGTAACTGGACGCGT...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCCAGCAGGTGGATGAGTaGCATCGGCTCCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFQQVDE*HRLPKR
Trigger: TCTTTTTGGGAGCCGATGTCACTCATCCACCTGCTG...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATACAGCAGGTGGATGAGTaGCATCGGCTCCCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIQQVDE*HRLPKR
Trigger: TCTTTTTGGGAGCCGATGTCACTCATCCACCTGCTG...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCTCCTGTCGGGGTCTCTaGACTCTTACTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPSCRGL*TLTVAQ
Trigger: CTGTGCCACAGTAAGAGTTCAGAGACCCCGACAGGA...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTCCTAAACTGCCCCTCTaGAACACCATCCCGATAAAA +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGPKLPL*NTIPIK
Trigger: TTTTATCGGGATGGTGTTTCAGAGGGGCAGTTTAGG...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACACGTAAGGTATCTTGGTaGATCTGTACAGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETRKVSW*ICTALA
Trigger: TGCCAAGGCTGTACAGATTCACCAAGATACCTTACG...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp TTAATCCTTCCTCTCCATCCCACATTAGACCATCACCATCTCTTACCTGAACTAGGGCTGAAGCTTCCCTaGGAGCAAGAAATTCCACTT +
Preference number: 4 (lower is better)
Translates to: LILPLHPTLDHHHLLPELGLKLP*EQEIPL
Trigger: AAGTGGAATTTCTTGCTCTCAGGGAAGCTTCAGCCC...TAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAGAGGAAGGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGCCTTCAGTCTTTCATaGCTCTGTCAGAAGGCCTAT +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETAFSLS*LCQKAY
Trigger: ATAGGCCTTCTGACAGAGTCATGAAAGACTGAAGGC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGATTTCTGTGCTGACTaGCTTACCTACTCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFDFCAD*LTYSWL
Trigger: CAGCCAAGAGTAGGTAAGTCAGTCAGCACAGAAATC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp CTCCATCCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGACTTCATGCAGTAGGTaGCAACTCACCCGAGAGACA +
Preference number: 4 (lower is better)
Translates to: LHPTLDHHHLLPELVIEKTSCSR*QLTRET
Trigger: TGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGT...CTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR GCA 90 bp CTGAACTACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCATCCATGGCTCGGTGTTaGTACTGTCCGATTCCGTCC +
Preference number: 4 (lower is better)
Translates to: LNYNVGYSRLIVFLQTDASMARC*YCPIPS
Trigger: GGACGGAATCGGACAGTAGCAACACCGAGCCATGGA...TGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTAGTTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp AAACGTGACTTCCTTCAGCACTGTCATGTTCTTTGTCCACAAGATGATATCTGGGTGGATCTCGCCCATTaGTTTGTCCTGAAACGTGAC +
Preference number: 4 (lower is better)
Translates to: KRDFLQHCHVLCPQDDIWVDLAH*FVLKRD
Trigger: GTCACGTTTCAGGACAAAGCAATGGGCGAGATCCAC...CCAGATATCATCTTGTGGACAAAGAACATGACAGTGCTGAAGGAAGTCACGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp CTCCATCCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGAACTGCTTCAGCCCATaGCTGAATTTCCCTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LHPTLDHHHLLPELVIEKNCFSP*LNFPAL
Trigger: AAGGGCAGGGAAATTCAGGCATGGGCTGAAGCAGTT...CTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR GCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAAGTTCGGACTACAGGTaGAAACCACCACATCTGGCT +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGSSDYR*KPPHLA
Trigger: AGCCAGATGTGGTGGTTTGCACCTGTAGTCCGAACT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATCTGAGGCAGGAGGACTaGTTGAGCTCAGGAGTTAGA +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNLRQED*LSSGVR
Trigger: TCTAACTCCTGAGCTCAAGCAGTCCTCCTGCCTCAG...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCACCACATCAACGGCATaGACAGGGTTAGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFTTSTA*TGLVLI
Trigger: AATCAGCACTAACCCTGTCCATGCCGTTGATGTGGT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTAGTGGCAGAAATTCATaGAGGGCAGATGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGSGRNS*RADVVA
Trigger: TGCTACGACATCTGCCCTCCATGAATTTCTGCCACT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000246314.10
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAGTTCTCTCCACAGTTTaGCCGTTTTCTAACTGTAAA +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGVLSTV*PFSNCK
Trigger: TTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAAC...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTCTGGAGCATAGGTGCTaGAAGTACGCGTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLALEHRC*KYASSY
Trigger: GTAACTGGACGCGTACTTCCAGCACCTATGCTCCAG...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCCTGGAGCATAGGTGCTaGAAGTACGCGTCCAGTTAC +
Preference number: 4 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFLEHRC*KYASSY
Trigger: GTAACTGGACGCGTACTTCCAGCACCTATGCTCCAG...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTATGTCCCATACTCCATaGCTCGGTGTTGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVMSHTP*LGVATV
Trigger: GACAGTAGCAACACCGAGCCATGGAGTATGGGACAT...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAAGTGTGAAGGACGACTaGTACCCTGTATTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETSVKDD*YPVFQH
Trigger: ATGCTGGAATACAGGGTACCAGTCGTCCTTCACACT...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGTGTTGGTTTCTGTATaGCTGGAGGTGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFVLVSV*LEVSLL
Trigger: GAGTAAGGACACCTCCAGCCATACAGAAACCAACAC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTGTGTTGGTTTCTGTATaGCTGGAGGTGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGVLVSV*LEVSLL
Trigger: GAGTAAGGACACCTCCAGCCATACAGAAACCAACAC...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGCCTCCTAGTTGCCACAGGAAGTaGATTGGCGGTGTAAAGACT +
Preference number: 4 (lower is better)
Translates to: PTLDHHHLLPELVIEKPPSCHRK*IGGVKT
Trigger: AGTCTTTACACCGCCAATCCACTTCCTGTGGCAACT...AGGAGGCTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp CCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGCCTCCTCAGGTGTGTATTTCATaGAGGGCAGATGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: PTLDHHHLLPELVIEKPPQVCIS*RADVVA
Trigger: TGCTACGACATCTGCCCTCCATGAAATACACACCTG...AGGAGGCTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp CTGGAGCGGAGAAAAATGAACGCCCCACAGGTGTGTATTTCATGGAGGGCAGATGAAAAGCCTCCTAACTaGCTTCTCAGATTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: LERRKMNAPQVCISWRADEKPPN*LLRLVF
Trigger: AAAAACTAATCTGAGAAGCCAGTTAGGAGGCTTTTC...ATCTGCCCTCCATGAAATACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCTCCCTCTCTAGTCTCTaGTGTTGCCTCTTCAACATC +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFSLSSL*CCLFNI
Trigger: GATGTTGAAGAGGCAACACCAGAGACTAGAGAGGGA...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGACATTTCGTGACAGTTTaGCTCAGAAAGAATCATGAC +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGHFVTV*LRKNHD
Trigger: GTCATGATTCTTTCTGAGCCAAACTGTCACGAAATG...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTCTTTGTAGAAGGCAGTaGCAGAAATCAGACTTGGGG +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGLCRRQ*QKSDLG
Trigger: CCCCAAGTCTGATTTCTGCCACTGCCTTCTACAAAG...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
3UTR CAA 72 bp TCATGCAGTAGGTGCCAACTCACCCGAGAGACAAATTaGATTGACACCTTGAAAGGTCGATCTTTTCCACCT +
Preference number: 4 (lower is better)
Translates to: SCSRCQLTRETN*IDTLKGRSFPP
Trigger: AGGTGGAAAAGATCGACCTTTCAAGGTGTCAATCAAATTTGTCTCTCGGGTGAGTTGGCACCTACTGCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAACGCGTCCAGTTACATaGGCCATTTCATCCCGAACT +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCITRPVT*AISSRT
Trigger: AGTTCGGGATGAAATGGCTCATGTAACTGGACGCGT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAAGGCCAAGTCCTGGATaGTCTCCTGTCGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRRPSPG*SPVGVS
Trigger: AGAGACCCCGACAGGAGATCATCCAGGACTTGGCCT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTCCTAAACTGCCCCTCTaGAACACCATCCCGATAAAA +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVPKLPL*NTIPIK
Trigger: TTTTATCGGGATGGTGTTTCAGAGGGGCAGTTTAGG...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCAGTCTTTCTCCAAACTaGTGCAGGCTTCTCGAATTG +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFSLSPN*CRLLEL
Trigger: CAATTCGAGAAGCCTGCATCAGTTTGGAGAAAGACT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGTGTCCTTACTCAATTaGCTTCACTGGAAACATACG +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLVSLLN*LHWKHT
Trigger: CGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACAC...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCAAAATGCTGAACCATTaGGTCAACCACCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFKMLNH*VNHLPV
Trigger: AACAGGGAGGTGGTTGACTCAATGGTTCAGCATTTT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTGGTAAATGTATGTTCTaGGTGGGAGGGGAGAGACGC +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAGKCMF*VGGERR
Trigger: GCGTCTCTCCCCTCCCACTCAGAACATACATTTACC...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTCTAAAGTTTCCCACATaGATCTGTGCAGCTCCCATG +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVLKFPT*ICAAPM
Trigger: CATGGGAGCTGCACAGATTCATGTGGGAAACTTTAG...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAGCATATATGAGTGACTaGAAATTAGGTGAGAGAGTA +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGAYMSD*KLGERV
Trigger: TACTCTCTCACCTAATTTTCAGTCACTCATATATGC...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGACAAGAGTCTACGCCCTaGCAAACGTCTTTGCTTTAC +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGQESTP*QTSLLY
Trigger: GTAAAGCAAAGACGTTTGTCAGGGCGTAGACTCTTG...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGATATGCCAGGTTTCTATaGACTTTCAGAAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGYARFL*TFRRKK
Trigger: CTTTTTCCTTCTGAAAGTTCATAGAAACCTGGCATA...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGCGGTCAAGCTGTACTaGTGTCAGGTAGCAGGATTT +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNAVKLY*CQVAGF
Trigger: AAATCCTGCTACCTGACATCAGTACAGCTTGACCGC...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGATTTTCTTTAAGAATATaGGGATCTCTGTTGGTTGGC +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGFSLRI*GSLLVG
Trigger: GCCAACCAACAGAGATCCTCATATTCTTAAAGAAAA...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTCTTATAGCCCACGCTTaGCTAGGAACTGGGATGAGT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLALIAHA*LGTGMS
Trigger: ACTCATCCCAGTTCCTAGTCAAGCGTGGGCTATAAG...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGTCACAGAACATTTCGTaGCAGTTTGGCTCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLSQNIS*QFGSER
Trigger: TCTTTCTGAGCCAAACTGTCACGAAATGTTCTGTGA...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp TACGCGTCCAGTTACATGAGCCATTTCATCCCGAACTTTAAATTGAAACTCCTGTCTTCGGGCAGCAGTTaGATCCTTGTTCTGTACATC +
Preference number: 4 (lower is better)
Translates to: YASSYMSHFIPNFKLKLLSSGSS*ILVLYI
Trigger: GATGTACAGAACAAGGATTCAACTGCTGCCCGAAGA...CAGGAGTTTCAATTTAAAGTTCGGGATGAAATGGCTCATGTAACTGGACGCGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTACTTCATGCAGTAGGTaGCAACTCACCCGAGAGACA +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLATSCSR*QLTRET
Trigger: TGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTATACTGGAGCATAGGTaGTGGAAGTACGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAILEHR*WKYASS
Trigger: ACTGGACGCGTACTTCCAGCACCTATGCTCCAGTAT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGAGCATAATACGCTGGTaGAGGTATAGAAACAGATCG +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLSIIRW*RYRNRS
Trigger: CGATCTGTTTCTATACCTGCACCAGCGTATTATGCT...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTGGTATGGAGCAAAATTaGCCTCTGGTAGGTAACTAC +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGGMEQN*PLVGNY
Trigger: GTAGTTACCTACCAGAGGGCAATTTTGCTCCATACC...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATTGTATTGCCCAGGCTTaGTTTAAACTCCTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNCIAQA*FKLLGS
Trigger: TGAGCCCAGGAGTTTAAAGCAAGCCTGGGCAATACA...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTCCCAAAGCCTATGAATaGATCCACGTACTAGTCCAC +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVPKAYE*IHVLVH
Trigger: GTGGACTAGTACGTGGATGCATTCATAGGCTTTGGG...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAACATACGCACACCACTaGTTCCCAAAGCCTATGAAT +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETTYAHH*FPKPMN
Trigger: ATTCATAGGCTTTGGGAAGCAGTGGTGTGCGTATGT...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CTCCATCCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGACCACATCAACGGCATaGACAGGGTTAGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: LHPTLDHHHLLPELVIEKTTSTA*TGLVLI
Trigger: AATCAGCACTAACCCTGTCCATGCCGTTGATGTGGT...CTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp AGCAGTTATCATCCCATAAAACATGATAGTGTGAAGGACGACTGGTACCCTGTAACCACATCAACGGCATaGACAGGGTTAGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: SSYHPIKHDSVKDDWYPVTTSTA*TGLVLI
Trigger: AATCAGCACTAACCCTGTCCATGCCGTTGATGTGGT...TACAGGGTACCAGTCGTCCTTCACACTATCATGTTTTATGGGATGATAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAATCAGTCAGAGGTCTTaGTTGCTCATCAATATTATG +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGISQRS*LLINIM
Trigger: CATAATATTGATGAGCAACCAAGACCTCTGACTGAT...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGTCCCATACTCCATaGCTCGGTGTTGCTACTGTC +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIMSHTP*LGVATV
Trigger: GACAGTAGCAACACCGAGCCATGGAGTATGGGACAT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTAACTGTTGTTCCAGCTaGGATATTGCCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGNCCSS*DIATSS
Trigger: GGAAGAAGTGGCAATATCCCAGCTGGAACAACAGTT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTAGTGTGAAGGACGACTaGTACCCTGTATTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVSVKDD*YPVFQH
Trigger: ATGCTGGAATACAGGGTACCAGTCGTCCTTCACACT...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GGATATTGCCACTTCTTCCAACCCTTTCTGTCCTATCAGCACAAAATAATCGAGGTGTTGGTTTCTGTATaGCTGGAGGTGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: GYCHFFQPFLSYQHKIIEVLVSV*LEVSLL
Trigger: GAGTAAGGACACCTCCAGCCATACAGAAACCAACAC...CTCGATTATTTTGTGCTGATAGGACAGAAAGGGTTGGAAGAAGTGGCAATATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCATAAGGATCAGACCTTaGCCCCCACACAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFIRIRP*PPHSVG
Trigger: ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTAT...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACACCACAGGAAGTGGATTaGCGGTGTAAAGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETPQEVD*RCKDFF
Trigger: AAAGAAGTCTTTACACCGCCAATCCACTTCCTGTGG...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCCAGGTGTGTATTTCATaGAGGGCAGATGTCGTAGCA +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITQVCIS*RADVVA
Trigger: TGCTACGACATCTGCCCTCCATGAAATACACACCTG...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCAATGTATGTTCTGAGTaGGAGGGGAGAGACGCACTC +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFNVCSE*EGRDAL
Trigger: GAGTGCGTCTCTCCCCTCCCACTCAGAACATACATT...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGCCTGTCAGAGGACATaGGCTCAGATTTTAGGCTCA +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNACQRT*AQILGS
Trigger: TGAGCCTAAAATCTGAGCCCATGTCCTCTGACAGGC...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCAACACTAGGCAGTGGTaGGCTGTGGAGAAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPNTRQW*AVEKLA
Trigger: AGCTAGCTTCTCCACAGCCCACCACTGCCTAGTGTT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATTCCTGGGACTCAGCTTaGCTTTCACTAATCACAGTG +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNSWDSA*LSLITV
Trigger: CACTGTGATTAGTGAAAGCCAAGCTGAGTCCCAGGA...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTAGGGACCCCGATGGCTaGATAGGTGATTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIARDPDG*IGDLTG
Trigger: TCCTGTCAAATCACCTATCCAGCCATCGGGGTCCCT...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGCATAAAAGCTTTCCTTaGTTCCCTTGGACGAGATTC +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLHKSFP*FPWTRF
Trigger: GAATCTCGTCCAAGGGAACCAAGGAAAGCTTTTATG...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAGGCCTTCCCAGTAGCTaGGATTACAGGCACGTACCG +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRGLPSS*DYRHVP
Trigger: CGGTACGTGCCTGTAATCCCAGCTACTGGGAAGGCC...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATTGCGGGTACTTCAGCTaGAGAGTATACTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNCGYFS*RVYFSL
Trigger: CAGAGAAAAGTATACTCTTCAGCTGAAGTACCCGCA...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AAACGTGACTTCCTTCAGCACTGTCATGTTCTTTGTCCACAAGATGATATCTGGTGCGGGTACTTCAGCTaGAGAGTATACTTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: KRDFLQHCHVLCPQDDIWCGYFS*RVYFSL
Trigger: CAGAGAAAAGTATACTCTTCAGCTGAAGTACCCGCA...CCAGATATCATCTTGTGGACAAAGAACATGACAGTGCTGAAGGAAGTCACGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATTGTCTGTTAGCTTCTTaGTACATCGTTGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNCLLAS*YIVALP
Trigger: TGGCAGGGCAACGATGTATCAAGAAGCTAACAGACA...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTGTCTGTTAGCTTCTTaGTACATCGTTGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFCLLAS*YIVALP
Trigger: TGGCAGGGCAACGATGTATCAAGAAGCTAACAGACA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCTACGCAGCTGGTCTGTaGAACCCTTCAATATTTCTT +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFYAAGL*NPSIFL
Trigger: AAGAAATATTGAAGGGTTTCACAGACCAGCTGCGTA...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTAGTCTTTCTCCAAACTaGTGCAGGCTTCTCGAATTG +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVSLSPN*CRLLEL
Trigger: CAATTCGAGAAGCCTGCATCAGTTTGGAGAAAGACT...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTCTTTGTCCTGAAACGTaGCTTCCTTCAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLALCPET*LPSALS
Trigger: TGACAGTGCTGAAGGAAGTCACGTTTCAGGACAAAG...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATCTTTGTCCTGAAACGTaGCTTCCTTCAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNLCPET*LPSALS
Trigger: TGACAGTGCTGAAGGAAGTCACGTTTCAGGACAAAG...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCCGTAAGGTATCTTGGTaGATCTGTACAGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFRKVSW*ICTALA
Trigger: TGCCAAGGCTGTACAGATTCACCAAGATACCTTACG...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AATACTGCGCTACTGTTCTCTCCACAGTTTGGCCGTTTTCTAACTGTAAAGGAATGCTGCCAAGCAACTTaGGGTAAAGGCATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: NTALLFSPQFGRFLTVKECCQAT*GKGIKR
Trigger: CCTTTTAATGCCTTTACCTCAAGTTGCTTGGCAGCA...TTCCTTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAACAGTAGCGCAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp CTCCATCCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGAAAATGCTGAACCATTaGGTCAACCACCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LHPTLDHHHLLPELVIEKKMLNH*VNHLPV
Trigger: AACAGGGAGGTGGTTGACTCAATGGTTCAGCATTTT...CTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTCACCCTTTGTTACTTTaGTATTCCGTGTCCTTACTC +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGHPLLL*YSVSLL
Trigger: GAGTAAGGACACGGAATATCAAAGTAACAAAGGGTG...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCACTTCATGCAGTAGGTaGCAACTCACCCGAGAGACA +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPTSCSR*QLTRET
Trigger: TGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCTGTCAGTACTTCATaGAGTAGGTGCCAACTCACC +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPPVSTS*SRCQLT
Trigger: GGTGAGTTGGCACCTACTGCATGAAGTACTGACAGG...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTATCTGGTGCAGATCTTaGTGTTGCCTTGATCATAGT +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGIWCRS*CCLDHS
Trigger: ACTATGATCAAGGCAACAGCAAGATCTGCACCAGAT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCCTCTTGTCTATCTGGTaGAGATCTTGCTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITLLSIW*RSCCCL
Trigger: AAGGCAACAGCAAGATCTGCACCAGATAGACAAGAG...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTTCCATGGCTCGGTGTTaGTACTGTCCGATTCCGTCC +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLSMARC*YCPIPS
Trigger: GGACGGAATCGGACAGTAGCAACACCGAGCCATGGA...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTATTTCTTCTCTGCACTaGCTCTGTGTGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGISSLH*LCVAKQ
Trigger: TTGTTTTGCCACACAGAGGCAGTGCAGAGAAGAAAT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGTATCTGCTTGGGTGTaGATCCATACTACCTACAAC +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVVSAWV*IHTTYN
Trigger: GTTGTAGGTAGTATGGATGCACACCCAAGCAGATAC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCTGTGGCACAGTATCTaGTTGGGTGTGCATCCATAC +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPLWHSI*LGVHPY
Trigger: GTATGGATGCACACCCAAGCAGATACTGTGCCACAG...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGTGGATCTCGCCCATTaGTTTGTCCTGAAACGTGAC +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPVDLAH*FVLKRD
Trigger: GTCACGTTTCAGGACAAAGCAATGGGCGAGATCCAC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGTGGCTGGTTTCATATTaGATAATGATGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLWLVSY*IMMLCS
Trigger: GGAACACAGCATCATTATGCAATATGAAACCAGCCA...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTTAGTACTTGATGTGTaGGGGGCTGAAGTATCTCAG +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVLVLDV*GAEVSQ
Trigger: CTGAGATACTTCAGCCCCGCACACATCAAGTACTAA...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAAAAATTCAGCCTGTGTaGTGGATATCTTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETKIQPV*WISCRE
Trigger: TTCCCTGCAAGATATCCAGCACACAGGCTGAATTTT...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAACTCAAAACTGCAGCTaGCATAGCACCACTAAAATC +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETTQNCS*HSTTKI
Trigger: GATTTTAGTGGTGCTATGGCAGCTGCAGTTTTGAGT...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAACCACATCAACGGCATaGACAGGGTTAGTGCTGATT +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCITTSTA*TGLVLI
Trigger: AATCAGCACTAACCCTGTCCATGCCGTTGATGTGGT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTTTCCTCTTGTCTATCTaGTGCAGATCTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVFLLSI*CRSCCC
Trigger: GCAACAGCAAGATCTGCACCAGATAGACAAGAGGAA...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCTGAACTCTTACTGTaGCACAGTATCTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVSELLL*HSICLG
Trigger: ACCCAAGCAGATACTGTGCCACAGTAAGAGTTCAGA...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTATGGAGGCCAAGTCCTaGATGATCTCCTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLMEAKS*MISCRG
Trigger: ACCCCGACAGGAGATCATCCAGGACTTGGCCTCCAT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAAAAATCGAACTCATATaGGTGTGTAATGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGKIELI*VCNVCI
Trigger: GATACAGACATTACACACCCATATGAGTTCGATTTT...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCAAAATCGAACTCATATaGGTGTGTAATGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSKIELI*VCNVCI
Trigger: GATACAGACATTACACACCCATATGAGTTCGATTTT...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTAGTGTGAAGGACGACTaGTACCCTGTATTCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLASVKDD*YPVFQH
Trigger: ATGCTGGAATACAGGGTACCAGTCGTCCTTCACACT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTGTGAGCATAATACGCTaGTGCAGGTATAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGVSIIR*CRYRNR
Trigger: TCTGTTTCTATACCTGCACCAGCGTATTATGCTCAC...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGTGAGCATAATACGCTaGTGCAGGTATAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFVSIIR*CRYRNR
Trigger: TCTGTTTCTATACCTGCACCAGCGTATTATGCTCAC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTGGTTTCTGTATGGCTaGAGGTGTCCTTACTCAATT +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGWFLYG*RCPYSI
Trigger: AATTGAGTAAGGACACCTCCAGCCATACAGAAACCA...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAGCCCCCACACAGTGTTaGTTTCTGTATGGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRAPTQC*FLYGWR
Trigger: CCTCCAGCCATACAGAAACCAACACTGTGTGGGGGC...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCATAAGGATCAGACCTTaGCCCCCACACAGTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPIRIRP*PPHSVG
Trigger: ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTAT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp TTAATCCTTCCTCTCCATCCCACATTAGACCATCACCATCTCTTACCTGAACTACCACAGGAAGTGGATTaGCGGTGTAAAGACTTCTTT +
Preference number: 4 (lower is better)
Translates to: LILPLHPTLDHHHLLPELPQEVD*RCKDFF
Trigger: AAAGAAGTCTTTACACCGCCAATCCACTTCCTGTGG...TAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAGAGGAAGGATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGGTTTCACGTGCAGATaGAATTCTGAAAGGCTAACA +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFGFTCR*NSERLT
Trigger: TGTTAGCCTTTCAGAATTCCATCTGCACGTGAAACC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCAAAAATCACTGCCCTTaGCAAATTCATGTAGGGCTC +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFKNHCP*QIHVGL
Trigger: GAGCCCTACATGAATTTGCCAAGGGCAGTGATTTTT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTTACTGCTTCCTGGTATaGAGCAAAATTGCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAYCFLV*SKIALW
Trigger: CCAGAGGGCAATTTTGCTCCATACCAGGAAGCAGTA...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTAGGGTTTCACCATATTaGCCACGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLARVSPY*PRWSQT
Trigger: AGTTTGAGACCAGCGTGGCCAATATGGTGAAACCCT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCGTTAGAGATCAGCCTTaGCAACATGTGAGACCCCAT +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFVRDQP*QHVRPH
Trigger: ATGGGGTCTCACATGTTGCCAAGGCTGATCTCTAAC...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGATTACACTCCCTGCAGTaGTGTGCCCTTTGTAATTTC +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGLHSLQ*CALCNF
Trigger: GAAATTACAAAGGGCACACCACTGCAGGGAGTGTAA...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp TGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTaGGCTGGTTTCATATTGCATAATGATGCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: CDTSYRRPHKKQ*AGFILHNDAVF
Trigger: GAACACAGCATCATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTAGAGACAAATTTGATTaGCACCTTGAAAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGRDKFD*HLERSI
Trigger: GATCGACCTTTCAAGGTGTCAATCAAATTTGTCTCT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGTGAATTTTACCCGATaGGAATCAGTCAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVVNFTR*ESVRGL
Trigger: AAGACCTCTGACTGATTCTCATCGGGTAAAATTCAC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATCATAGTGGAAGTCTaGTTGTCTGTTAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFIIVEV*LSVSFL
Trigger: CAAGAAGCTAACAGACAATCAGACTTCCACTATGAT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTTACGCAGCTGGTCTGTaGAACCCTTCAATATTTCTT +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVYAAGL*NPSIFL
Trigger: AAGAAATATTGAAGGGTTTCACAGACCAGCTGCGTA...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAAGTCTTTCTCCAAACTaGTGCAGGCTTCTCGAATTG +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCISLSPN*CRLLEL
Trigger: CAATTCGAGAAGCCTGCATCAGTTTGGAGAAAGACT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCTCTTTGTCCACAAGATaGTATCTGGCTCTAAATGCT +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFSLSTR*YLALNA
Trigger: AGCATTTAGAGCCAGATATCATCTTGTGGACAAAGA...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATCTTTGTCCACAAGATaGTATCTGGCTCTAAATGCT +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETSLSTR*YLALNA
Trigger: AGCATTTAGAGCCAGATATCATCTTGTGGACAAAGA...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAGTGTCCTTACTCAATTaGCTTCACTGGAAACATACG +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGVSLLN*LHWKHT
Trigger: CGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACAC...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTGCTGCCAAGCAACTTaGGGTAAAGGCATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFCCQAT*GKGIKR
Trigger: CCTTTTAATGCCTTTACCTCAAGTTGCTTGGCAGCA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATGCTGCCAAGCAACTTaGGGTAAAGGCATTAAAAGG +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCICCQAT*GKGIKR
Trigger: CCTTTTAATGCCTTTACCTCAAGTTGCTTGGCAGCA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGTTACTTTAAAATGCTaGACCATTGAGTCAACCACC +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETVTLKC*TIESTT
Trigger: GGTGGTTGACTCAATGGTTCAGCATTTTAAAGTAAC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp TTCAGCTTAATCCTTCCTCTCCATCCCACATTAGACCATCACCATCTCTTACCTCCTGATTCAATTAGGTaGAAGGTCTTAAAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: FSLILPLHPTLDHHHLLPPDSIR*KVLKVG
Trigger: CCCTACTTTTAAGACCTTTCACCTAATTGAATCAGG...AGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAGAGGAAGGATTAAGCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTCGATGGCTGGATAGGTaGTTTGACAGGATTCTAATT +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVRWLDR*FDRILI
Trigger: AATTAGAATCCTGTCAAATCACCTATCCAGCCATCG...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTATAGCTTGTGGCATGTaGTTCTTCTTTCCCAAGTAT +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGIACGM*FFFPKY
Trigger: ATACTTGGGAAAGAAGAATCACATGCCACAAGCTAT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAAGCTACTTGGGAGGCTaGAGCAGGAGGATAGTTTGG +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRSYLGG*SRRIVW
Trigger: CCAAACTATCCTCCTGCTTCAGCCTCCCAAGTAGCT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGATAAAAGTAAATGTTaGATGCGTCCATACCCTGTG +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETDKSKC*MRPYPV
Trigger: CACAGGGTATGGACGCATTCAACATTTACTTTTATC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TACGCGTCCAGTTACATGAGCCATTTCATCCCGAACTTTAAATTGAAACTCCTGATCTGGTGCAGATCTTaGTGTTGCCTTGATCATAGT +
Preference number: 4 (lower is better)
Translates to: YASSYMSHFIPNFKLKLLIWCRS*CCLDHS
Trigger: ACTATGATCAAGGCAACAGCAAGATCTGCACCAGAT...CAGGAGTTTCAATTTAAAGTTCGGGATGAAATGGCTCATGTAACTGGACGCGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTATTTCTTCTCTGCACTaGCTCTGTGTGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVISSLH*LCVAKQ
Trigger: TTGTTTTGCCACACAGAGGCAGTGCAGAGAAGAAAT...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGATCAATATTTCTTCTCTaGACTGCCTCTGTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGSIFLL*TASVWQ
Trigger: TTGCCACACAGAGGCAGTGCAGAGAAGAAATATTGA...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTAAAAAGATCACTGGTTaGTGGAACACAGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGKKITG*WNTEGL
Trigger: AAGACCTTCTGTGTTCCAGCAACCAGTGATCTTTTT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTAGCATAATACGCTGGTaGAGGTATAGAAACAGATCG +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVSIIRW*RYRNRS
Trigger: CGATCTGTTTCTATACCTGCACCAGCGTATTATGCT...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCCCATTAGGTTTCACGTaGAGATGGAATTCTGAAAGG +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITPLGFT*RWNSER
Trigger: CCTTTCAGAATTCCATCTGCACGTGAAACCTAATGG...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTGATCCATCACTGGCATaGTTAGCGCTCACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLDPSLA*LALTLS
Trigger: GGAAAGGGTGAGCGCTAAGCATGCCAGTGATGGATC...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATCTGTTAAGGGCAACCTaGCTGTTCAACAGAAGAACA +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNLLRAT*LFNRRT
Trigger: TGTTCTTCTGTTGAACAGGCAGGTTGCCCTTAACAG...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGACCTGACAAACGTCTTTaGTTTACTGAGACCCTAACA +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGPDKRL*FTETLT
Trigger: TGTTAGGGTCTCAGTAAAGCAAAGACGTTTGTCAGG...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTACTTTCCCATTTCCTTaGCTCTCAGTGGAATACACT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVTFPFP*LSVEYT
Trigger: AGTGTATTCCACTGAGAGGCAAGGAAATGGGAAAGT...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGAAAGGTTTGATGACTaGCAGGCCTCCTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAERFDD*QASLLH
Trigger: ATGTAACAAGGAGGCCTGCCAGTCATCAAACCTTTC...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGAAAGGTTTGATGACTaGCAGGCCTCCTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNERFDD*QASLLH
Trigger: ATGTAACAAGGAGGCCTGCCAGTCATCAAACCTTTC...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGTTCTCTCCACAGTTTaGCCGTTTTCTAACTGTAAA +
Preference number: 4 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFVLSTV*PFSNCK
Trigger: TTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAAC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGAAATCTTACGCAGCTaGTCTGTGAAACCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVEILRS*SVKPFN
Trigger: ATTGAAGGGTTTCACAGACCAGCTGCGTAAGATTTC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATCTGAACTCTTACTGTaGCACAGTATCTGCTTGGGT +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCISELLL*HSICLG
Trigger: ACCCAAGCAGATACTGTGCCACAGTAAGAGTTCAGA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATAACTGTTGTTCCAGCTaGGATATTGCCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNNCCSS*DIATSS
Trigger: GGAAGAAGTGGCAATATCCCAGCTGGAACAACAGTT...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTAGTTGCCACAGGAAGTaGATTGGCGGTGTAAAGACT +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIASCHRK*IGGVKT
Trigger: AGTCTTTACACCGCCAATCCACTTCCTGTGGCAACT...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATTGCCCTTTTAAACTATaGAGGTGCCTGTTCCTCCTA +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNCPFKL*RCLFLL
Trigger: TAGGAGGAACAGGCACCTCCATAGTTTAAAAGGGCA...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTAATATTGTAAGTGTATaGTCCTCCATGCCAGTAACC +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGNIVSV*SSMPVT
Trigger: GGTTACTGGCATGGAGGACCATACACTTACAATATT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTACGGTCTCTAATTCCTaGTCTGCAATCCATCTAAAT +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGTVSNS*SAIHLN
Trigger: ATTTAGATGGATTGCAGACCAGGAATTAGAGACCGT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTGCATGTTGGCCAGGATaGTCTCCATCTCTTGACCTC +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLACWPG*SPSLDL
Trigger: GAGGTCAAGAGATGGAGACCATCCTGGCCAACATGC...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAACTTCACACATGAACTaGATTACAGGTTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGTSHMN*ITGCAL
Trigger: CAAAGCACAACCTGTAATTCAGTTCATGTGTGAAGT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGTGAATTTTACCCGATaGGAATCAGTCAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNVNFTR*ESVRGL
Trigger: AAGACCTCTGACTGATTCTCATCGGGTAAAATTCAC...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGACTCATTGTTCCACAATaGGTCACTTCAACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGLIVPQ*VTSTFK
Trigger: TTTGAAGGTTGAAGTGACTCATTGTGGAACAATGAG...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AATACTGCGCTACTGTTCTCTCCACAGTTTGGCCGTTTTCTAACTGTAAAGGAACTCATTGTTCCACAATaGGTCACTTCAACCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NTALLFSPQFGRFLTVKELIVPQ*VTSTFK
Trigger: TTTGAAGGTTGAAGTGACTCATTGTGGAACAATGAG...TTCCTTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAACAGTAGCGCAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGAGTATACTTTTCTCTaGAATACTGCGCTACTGTTC +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVEYTFL*NTALLF
Trigger: GAACAGTAGCGCAGTATTTCAGAGAAAAGTATACTC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp TCCATGCTCTTCGGGCAGCAGTTGAATCCTTGTTCTGTACATCTTGTATTTTCTGAGTATACTTTTCTCTaGAATACTGCGCTACTGTTC +
Preference number: 4 (lower is better)
Translates to: SMLFGQQLNPCSVHLVFSEYTFL*NTALLF
Trigger: GAACAGTAGCGCAGTATTTCAGAGAAAAGTATACTC...AGAAAATACAAGATGTACAGAACAAGGATTCAACTGCTGCCCGAAGAGCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTATCATAGTGGAAGTCTaGTTGTCTGTTAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVIIVEV*LSVSFL
Trigger: CAAGAAGCTAACAGACAATCAGACTTCCACTATGAT...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAACGCGTCCAGTTACATaGGCCATTTCATCCCGAACT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRTRPVT*AISSRT
Trigger: AGTTCGGGATGAAATGGCTCATGTAACTGGACGCGT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTTACGCAGCTGGTCTGTaGAACCCTTCAATATTTCTT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAYAAGL*NPSIFL
Trigger: AAGAAATATTGAAGGGTTTCACAGACCAGCTGCGTA...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCTTTGTCCACAAGATaGTATCTGGCTCTAAATGCT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVSLSTR*YLALNA
Trigger: AGCATTTAGAGCCAGATATCATCTTGTGGACAAAGA...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCGTGTCCTTACTCAATTaGCTTCACTGGAAACATACG +
Preference number: 4 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFVSLLN*LHWKHT
Trigger: CGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACAC...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATCAAGAAGGCAGATGTaGGACATAAGCTGTATAATA +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETSRRQM*DISCII
Trigger: TATTATACAGCTTATGTCTCACATCTGCCTTCTTGA...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTGGCTGTAGTGAGCTATaGTCACACTACTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAGCSEL*SHYCSS
Trigger: TGAACTACAGTAGTGTGATCATAGCTCACTACAGCC...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATGGTCATATTACCATTaGGTCCCCCAAACACTAAAG +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIWSYYH*VPQTLK
Trigger: CTTTAGTGTTTGGGGGACTCAATGGTAATATGACCA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCAAGTGTTCTCTAGAGTaGGCAGTCAGATTACACTGC +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPKCSLE*AVRLHC
Trigger: GCAGTGTAATCTGACTGCTCACTCTAGAGAACACTT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCTCTTGTCTATCTGGTaGAGATCTTGCTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPLLSIW*RSCCCL
Trigger: AAGGCAACAGCAAGATCTGCACCAGATAGACAAGAG...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAATACTGGAGCATAGGTaGTGGAAGTACGCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRILEHR*WKYASS
Trigger: ACTGGACGCGTACTTCCAGCACCTATGCTCCAGTAT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTCAATATTTCTTCTCTaGACTGCCTCTGTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFSIFLL*TASVWQ
Trigger: TTGCCACACAGAGGCAGTGCAGAGAAGAAATATTGA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTAAAAAGATCACTGGTTaGTGGAACACAGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVKKITG*WNTEGL
Trigger: AAGACCTTCTGTGTTCCAGCAACCAGTGATCTTTTT...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp TCCATGCTCTTCGGGCAGCAGTTGAATCCTTGTTCTGTACATCTTGTATTTTCTAAAAAGATCACTGGTTaGTGGAACACAGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SMLFGQQLNPCSVHLVFSKKITG*WNTEGL
Trigger: AAGACCTTCTGTGTTCCAGCAACCAGTGATCTTTTT...AGAAAATACAAGATGTACAGAACAAGGATTCAACTGCTGCCCGAAGAGCATGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGTATCTGCTTGGGTGTaGATCCATACTACCTACAAC +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPVSAWV*IHTTYN
Trigger: GTTGTAGGTAGTATGGATGCACACCCAAGCAGATAC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCAGCATAATACGCTGGTaGAGGTATAGAAACAGATCG +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFSIIRW*RYRNRS
Trigger: CGATCTGTTTCTATACCTGCACCAGCGTATTATGCT...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AATACTGCGCTACTGTTCTCTCCACAGTTTGGCCGTTTTCTAACTGTAAAGGAAAAGCGAAGTACATTGTaGGTAAGGTATCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: NTALLFSPQFGRFLTVKEKRSTL*VRYLGE
Trigger: TTCACCAAGATACCTTACGCACAATGTACTTCGCTT...TTCCTTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAACAGTAGCGCAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATTGGCTGGTTTCATATTaGATAATGATGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNWLVSY*IMMLCS
Trigger: GGAACACAGCATCATTATGCAATATGAAACCAGCCA...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAATCTACCCCTGTAGTTaGCACAGGAAGTGGATTGGC +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRIYPCS*HRKWIG
Trigger: GCCAATCCACTTCCTGTGGCAACTACAGGGGTAGAT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCTTCACAGGAAAGAAGTaGCTAGGTGATCATTTACTG +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITFTGKK*LGDHLL
Trigger: CAGTAAATGATCACCTAGGCACTTCTTTCCTGTGAA...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAAGTAGAGACGGGTTTTaGCATGTTGTCCAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRSRDGF*HVVQAG
Trigger: ACCAGCCTGGACAACATGGCAAAACCCGTCTCTACT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTACACCTGATATGACCTaGAGGTGCTCAGAATTGAAT +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLATPDMT*RCSELN
Trigger: ATTCAATTCTGAGCACCTGCAGGTCATATCAGGTGT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTAAAGTAAATGTTGAATaGGTCCATACCCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVKVNVE*VHTLCT
Trigger: GGTACACAGGGTATGGACGCATTCAACATTTACTTT...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACACCTAGGACACTTGTCTaGTTTAATATCTACCTCATA +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETPRTLV*FNIYLI
Trigger: TATGAGGTAGATATTAAACCAGACAAGTGTCCTAGG...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GAGATCAGGTCTCACTATGTTGTTCAGCCTGATCGCAAACTCCTAATCTCAAGTCCTAGGACACTTGTCTaGTTTAATATCTACCTCATA +
Preference number: 4 (lower is better)
Translates to: EIRSHYVVQPDRKLLISSPRTLV*FNIYLI
Trigger: TATGAGGTAGATATTAAACCAGACAAGTGTCCTAGG...ACTTGAGATTAGGAGTTTGCGATCAGGCTGAACAACATAGTGAGACCTGATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTCCTAGGACACTTGTCTaGTTTAATATCTACCTCATA +
Preference number: 4 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGPRTLV*FNIYLI
Trigger: TATGAGGTAGATATTAAACCAGACAAGTGTCCTAGG...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGAAAGGTTTGATGACTaGCAGGCCTCCTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPERFDD*QASLLH
Trigger: ATGTAACAAGGAGGCCTGCCAGTCATCAAACCTTTC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CTGAACTACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCATTCCTCTTGTCTATCTaGTGCAGATCTTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LNYNVGYSRLIVFLQTDAFLLSI*CRSCCC
Trigger: GCAACAGCAAGATCTGCACCAGATAGACAAGAGGAA...TGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTAGTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTATTTCAACTCCTGTGTaGAATTGTTTCCCTCGCATG +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAISTPV*NCFPRM
Trigger: CATGCGAGGGAAACAATTCCACACAGGAGTTGAAAT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCAACTGTTGTTCCAGCTaGGATATTGCCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPNCCSS*DIATSS
Trigger: GGAAGAAGTGGCAATATCCCAGCTGGAACAACAGTT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATTGGTTTCTGTATGGCTaGAGGTGTCCTTACTCAATT +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNWFLYG*RCPYSI
Trigger: AATTGAGTAAGGACACCTCCAGCCATACAGAAACCA...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp TACGCGTCCAGTTACATGAGCCATTTCATCCCGAACTTTAAATTGAAACTCCTGCGCACAAAAAGCAGTTaGCTGGTTTCATATTGCATA +
Preference number: 4 (lower is better)
Translates to: YASSYMSHFIPNFKLKLLRTKSS*LVSYCI
Trigger: TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCG...CAGGAGTTTCAATTTAAAGTTCGGGATGAAATGGCTCATGTAACTGGACGCGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp GAGATCAGGTCTCACTATGTTGTTCAGCCTGATCGCAAACTCCTAATCTCAAGTAAGTGTAAGCCATCATaGCAGGTGTTGTTTTTAATG +
Preference number: 4 (lower is better)
Translates to: EIRSHYVVQPDRKLLISSKCKPS*QVLFLM
Trigger: CATTAAAAACAACACCTGCCATGATGGCTTACACTT...ACTTGAGATTAGGAGTTTGCGATCAGGCTGAACAACATAGTGAGACCTGATCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATCTATTTACTGCTTCCTaGTATGGAGCAAAATTGCCC +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNLFTAS*YGAKLP
Trigger: GGGCAATTTTGCTCCATACCAGGAAGCAGTAAATAG...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTTCAAGCTATAGCTTGTaGCATGTGATTCTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVSSYSL*HVILLS
Trigger: GGAAAGAAGAATCACATGCCACAAGCTATAGCTTGA...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCTTTCAGTCATTTCTTTaGGCCCCTGAGCAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPFQSFL*APEQLK
Trigger: CTTCAACTGCTCAGGGGCCCAAAGAAATGACTGAAA...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTTTGGGATTTCAACTTaGAAACAGTTAGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFFGIST*KQLASS
Trigger: ACTGCTGGCTAACTGTTTTCAAGTTGAAATCCCAAA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp CTCTTACCTGAACTAGTGATTGAAAAGCCTCCTAACTGGCTTCTCAGATTAGTTAGAGACAAATTTGATTaGCACCTTGAAAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: LLPELVIEKPPNWLLRLVRDKFD*HLERSI
Trigger: GATCGACCTTTCAAGGTGTCAATCAAATTTGTCTCT...AACTAATCTGAGAAGCCAGTTAGGAGGCTTTTCAATCACTAGTTCAGGTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCAGAGACAAATTTGATTaGCACCTTGAAAGGTCGATC +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFRDKFD*HLERSI
Trigger: GATCGACCTTTCAAGGTGTCAATCAAATTTGTCTCT...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAACTTCACACATGAACTaGATTACAGGTTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCITSHMN*ITGCAL
Trigger: CAAAGCACAACCTGTAATTCAGTTCATGTGTGAAGT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTACTTCACACATGAACTaGATTACAGGTTGTGCTTTG +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLATSHMN*ITGCAL
Trigger: CAAAGCACAACCTGTAATTCAGTTCATGTGTGAAGT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTGTGAATTTTACCCGATaGGAATCAGTCAGAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAVNFTR*ESVRGL
Trigger: AAGACCTCTGACTGATTCTCATCGGGTAAAATTCAC...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCATAGTGGAAGTCTaGTTGTCTGTTAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFIIVEV*LSVSFL
Trigger: CAAGAAGCTAACAGACAATCAGACTTCCACTATGAT...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAAGATACATCAACATTTaGATGTCACTGGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIRYINI*MSLVGL
Trigger: CAGTCCTACCAGTGACATTCAAATGTTGATGTATCT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000246314.10
ENST00000373191.9
CDS-3UTR TCA 90 bp CTCTTACCTGAACTAGTGATTGAAAAGCCTCCTAACTGGCTTCTCAGATTAGTTGTTACTTTAAAATGCTaGACCATTGAGTCAACCACC +
Preference number: 4 (lower is better)
Translates to: LLPELVIEKPPNWLLRLVVTLKC*TIESTT
Trigger: GGTGGTTGACTCAATGGTTCAGCATTTTAAAGTAAC...AACTAATCTGAGAAGCCAGTTAGGAGGCTTTTCAATCACTAGTTCAGGTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR TCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAATCACATTAAGGTATaGGAGGCAGCAAGTAAACTA +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITNHIKV*EAASKL
Trigger: TAGTTTACTTGCTGCCTCTCATACCTTAATGTGATT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCCATGCCAGTAACCTaGTACTGTGATATAATACAT +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVSMPVT*YCDIIH
Trigger: ATGTATTATATCACAGTATCAGGTTACTGGCATGGA...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTCTCAACCCTCTATATTaGATTTACCATCCTTCTATC +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVLNPLY*IYHPSI
Trigger: GATAGAAGGATGGTAAATTCAATATAGAGGGTTGAG...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAGAAAATGTTGCCTATaGTTCCAGGCAAGTTACATT +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITRKCCL*FQASYI
Trigger: AATGTAACTTGCCTGGAATCATAGGCAACATTTTCT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAAAAGAAGTGCCTAGGTaGTCATTTACTGCTATTTAC +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGKEVPR*SFTAIY
Trigger: GTAAATAGCAGTAAATGATCACCTAGGCACTTCTTT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAGGATATGTTTGTAAGTaGACACTACACCATGATAAG +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGGYVCK*TLHHDK
Trigger: CTTATCATGGTGTAGTGTTCACTTACAAACATATCC...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGCAGGTGCTCAGAATTaGATTCACATGAAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPAGAQN*IHMKQK
Trigger: TTTCTGCTTCATGTGAATTCAATTCTGAGCACCTGC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAATCAGACACCTGATATaGCCTGCAGGTGCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRIRHLI*PAGAQN
Trigger: ATTCTGAGCACCTGCAGGTCATATCAGGTGTCTGAT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAGCTTCCCAAAGCCTATaGATGCATCCACGTACTAGT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRASQSL*MHPRTS
Trigger: ACTAGTACGTGGATGCATTCATAGGCTTTGGGAAGC...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCATTTCTTCTCTGCACTaGCTCTGTGTGGCAAAACAA +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPISSLH*LCVAKQ
Trigger: TTGTTTTGCCACACAGAGGCAGTGCAGAGAAGAAAT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAAAGCGAAGTACATTGTaGGTAAGGTATCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIKRSTL*VRYLGE
Trigger: TTCACCAAGATACCTTACGCACAATGTACTTCGCTT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTTGGCTGGTTTCATATTaGATAATGATGCTGTGTTCC +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAWLVSY*IMMLCS
Trigger: GGAACACAGCATCATTATGCAATATGAAACCAGCCA...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CTCTTACCTGAACTAGTGATTGAAAAGCCTCCTAACTGGCTTCTCAGATTAGTTGCTAGCCCCTACAATTaGATAAACTCTCTCTCTATA +
Preference number: 4 (lower is better)
Translates to: LLPELVIEKPPNWLLRLVASPYN*INSLSI
Trigger: TATAGAGAGAGAGTTTATGCAATTGTAGGGGCTAGC...AACTAATCTGAGAAGCCAGTTAGGAGGCTTTTCAATCACTAGTTCAGGTAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR GCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTACTAGCCTTGAATCCTaGTTATCTCCTTACTGTTTA +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVTSLES*LSPYCL
Trigger: TAAACAGTAAGGAGATAAGCAGGATTCAAGGCTAGT...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTTTACTGCTATTTACTaGTTCCTGGTATGGAGCAAA +
Preference number: 4 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVFTAIY*FLVWSK
Trigger: TTTGCTCCATACCAGGAAGCAGTAAATAGCAGTAAA...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTTCTTTTCTGGAAGAATaGTCACCAAATTCACAGGAA +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVSFLEE*SPNSQE
Trigger: TTCCTGTGAATTTGGTGAGCATTCTTCCAGAAAAGA...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATCTAGTCTCTGGTGTTaGCTCTTCAACATCAAACAT +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCISSLWC*LFNIKH
Trigger: ATGTTTGATGTTGAAGAGGCAACACCAGAGACTAGA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATTTGGAGAACTCAAATaGTTCCGCAAACATTATCTT +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETFGELK*FRKHYL
Trigger: AAGATAATGTTTGCGGAAGCATTTGAGTTCTCCAAA...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCAGAGTCCCATCATTTTaGCTTGCTGAAACTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPRVPSF*LAETGF
Trigger: AAACCCAGTTTCAGCAAGGCAAAATGATGGGACTCT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGATATTGCCACTTCTTCCAACCCTTTCTGTCCTATCAGCACAAAATAATCGAGATCAGTCAGAGGTCTTaGTTGCTCATCAATATTATG +
Preference number: 4 (lower is better)
Translates to: GYCHFFQPFLSYQHKIIEISQRS*LLINIM
Trigger: CATAATATTGATGAGCAACCAAGACCTCTGACTGAT...CTCGATTATTTTGTGCTGATAGGACAGAAAGGGTTGGAAGAAGTGGCAATATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGAAATCTTACGCAGCTaGTCTGTGAAACCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPEILRS*SVKPFN
Trigger: ATTGAAGGGTTTCACAGACCAGCTGCGTAAGATTTC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAAAAATCGAACTCATATaGGTGTGTAATGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETKIELI*VCNVCI
Trigger: GATACAGACATTACACACCCATATGAGTTCGATTTT...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTTGGTTTCTGTATGGCTaGAGGTGTCCTTACTCAATT +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAWFLYG*RCPYSI
Trigger: AATTGAGTAAGGACACCTCCAGCCATACAGAAACCA...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTCGCACAAAAAGCAGTTaGCTGGTTTCATATTGCATA +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLARTKSS*LVSYCI
Trigger: TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCG...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GAGATCAGGTCTCACTATGTTGTTCAGCCTGATCGCAAACTCCTAATCTCAAGTTTTTCCATCATAAACTaGTCTACGGTCTCCAAATAT +
Preference number: 4 (lower is better)
Translates to: EIRSHYVVQPDRKLLISSFSIIN*STVSKY
Trigger: ATATTTGGAGACCGTAGACCAGTTTATGATGGAAAA...ACTTGAGATTAGGAGTTTGCGATCAGGCTGAACAACATAGTGAGACCTGATCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CCA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATAACAACAATGCCCACTaGAAACAATCTGTAGTATCT +
Preference number: 4 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNNNNAH*KQSVVS
Trigger: AGATACTACAGATTGTTTCCAGTGGGCATTGTTGTT...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCTTTCCTTGGTTCCCTTaGACGAGATTCAAGACAACA +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPFPWFP*TRFKTT
Trigger: TGTTGTCTTGAATCTCGTCCAAGGGAACCAAGGAAA...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAAGGATCTCTGTTGGTTaGCAGAAGGTTAGAATATTA +
Preference number: 4 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGRISVG*QKVRIL
Trigger: TAATATTCTAACCTTCTGCCAACCAACAGAGATCCT...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp AAATTAGGGTTATACTGCTACACAGGAAGGCGTTACTaGATGTCAAACCTCCCAACAATTCTTACTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KLGLYCYTGRRY*MSNLPTILTEA
Trigger: AGCTTCAGTAAGAATTGTTGGGAGGTTTGACATCAAGTAACGCCTTCCTGTGTAGCAGTATAACCCTAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp TTGAAATTCTCATTGAAATTAATGCAGATGCCAGCTTaGTTAGCAATGAGTTGGAAAAGCCCAACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LKFSLKLMQMPA*LAMSWKSPTAC
Trigger: GCAGGCAGTTGGGCTTTTCCAACTCATTGCTAACAAAGCTGGCATCTGCATTAATTTCAATGAGAATTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGAGTATACTTTTCTCTaGAATACTGCGCTACTGTTC +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPEYTFL*NTALLF
Trigger: GAACAGTAGCGCAGTATTTCAGAGAAAAGTATACTC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR TCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCAGATACATCAACATTTaGATGTCACTGGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPRYINI*MSLVGL
Trigger: CAGTCCTACCAGTGACATTCAAATGTTGATGTATCT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246314.10
ENST00000373191.9
CDS-3UTR TCA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTAGGCTCAAAATACAGTaGATTGGCAATAATAGTGGA +
Preference number: 4 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLARLKIQ*IGNNSG
Trigger: TCCACTATTATTGCCAATTCACTGTATTTTGAGCCT...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTACGTCTTTGCTTTACTaGGACCCTAACATAGATACA +
Preference number: 4 (lower is better)
Translates to: KCKAPLNPMLLINSVLIATSLLY*DPNIDT
Trigger: TGTATCTATGTTAGGGTCTCAGTAAAGCAAAGACGT...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAATCAAACTGTATCCATaGACTGGGTCGGACTGTCTA +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRIKLYP*TGSDCL
Trigger: TAGACAGTCCGACCCAGTTCATGGATACAGTTTGAT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACTGAATTACAGGTTGTaGTTTGTAGAAGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRLNYRL*FVEGSG
Trigger: GCCACTGCCTTCTACAAAGCACAACCTGTAATTCAG...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACTCTTGTCTATCTGGTaGAGATCTTGCTGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRLLSIW*RSCCCL
Trigger: AAGGCAACAGCAAGATCTGCACCAGATAGACAAGAG...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGATTCCAGCTGGGATATTaGCACTTCTTCCAACCCTTT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRFQLGY*HFFQPF
Trigger: AAAGGGTTGGAAGAAGTGGCAATATCCCAGCTGGAA...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATATCTGGCTCTAAATaGTACCAGGTGAGCATAATA +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIISGSK*YQVSII
Trigger: TATTATGCTCACCTGGTAGCATTTAGAGCCAGATAT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCAAGCGAAGTACATTGTaGGTAAGGTATCTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPKRSTL*VRYLGE
Trigger: TTCACCAAGATACCTTACGCACAATGTACTTCGCTT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCAAATTAGGGTTATACTaGTACACAGGAAGGCGTTAC +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPKLGLY*YTGRRY
Trigger: GTAACGCCTTCCTGTGTAGCAGTATAACCCTAATTT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCGTTTGCTGTTTTATGTaGATTATGGATTTCCTCCAA +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITVCCFM*IMDFLQ
Trigger: TTGGAGGAAATCCATAATGCACATAAAACAGCAAAC...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATACCCTTAAGCACAATTTaGAGACCCTACTTCTATTTA +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIPLSTI*RPYFYL
Trigger: TAAATAGAAGTAGGGTCTGCAAATTGTGCTTAAGGG...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTCATCAAGTACTTCACTaGGGTCAAGCTGTACTGATG +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLHQVLH*GQAVLM
Trigger: CATCAGTACAGCTTGACCGCAGTGAAGTACTTGATG...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAGTGTGCTGGATATCTTaGAGGGAAGAAACAACAGGA +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRVCWIS*REETTG
Trigger: TCCTGTTGTTTCTTCCCTGCAAGATATCCAGCACAC...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGATATGACCTGCAGGTaGTCAGAATTGAATTCACAT +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPDMTCR*SELNSH
Trigger: ATGTGAATTCAATTCTGAGCACCTGCAGGTCATATC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTATTGTTTACACTCCCTaGAGTGGTGTGCCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLIVYTP*SGVPFV
Trigger: TACAAAGGGCACACCACTGCAGGGAGTGTAAACAAT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGTTCTCTCCACAGTTTaGCCGTTTTCTAACTGTAAA +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPVLSTV*PFSNCK
Trigger: TTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAAC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCGCACAAAAAGCAGTTaGCTGGTTTCATATTGCATA +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPRTKSS*LVSYCI
Trigger: TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCG...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCTTTTCCATCATAAACTaGTCTACGGTCTCCAAATAT +
Preference number: 4 (lower is better)
Translates to: TLFFKERYQKSAKKQGITFSIIN*STVSKY
Trigger: ATATTTGGAGACCGTAGACCAGTTTATGATGGAAAA...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGCAAACCACCACATCTaGCTAATATCAACAATAATA +
Preference number: 4 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVANHHI*LISTII
Trigger: TATTATTGTTGATATTAGCCAGATGTGGTGGTTTGC...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGATTGTTAGCAATGAGTTaGAAAAGCCCAACTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRLLAMS*KSPTAC
Trigger: GCAGGCAGTTGGGCTTTTCCAACTCATTGCTAACAA...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp CATCAGACACCTGATATGACCTGCAGGTGCTCAGAATaGAATTCACATGAAGCAGAAACTTTCACTATATTT +
Preference number: 4 (lower is better)
Translates to: HQTPDMTCRCSE*NSHEAETFTIF
Trigger: AAATATAGTGAAAGTTTCTGCTTCATGTGAATTCAATTCTGAGCACCTGCAGGTCATATCAGGTGTCTGATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp AGGAGATGTTTTTATTACATTCTTGACTTGAACACATaGTGTAGCCATACCCAAAAGTGTGTCTCCTACACG +
Preference number: 4 (lower is better)
Translates to: RRCFYYILDLNT*CSHTQKCVSYT
Trigger: CGTGTAGGAGACACACTTTTGGGTATGGCTACACAATGTGTTCAAGTCAAGAATGTAATAAAAACATCTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAATCTGGTGCAGATCTTaGTGTTGCCTTGATCATAGT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRIWCRS*CCLDHS
Trigger: ACTATGATCAAGGCAACAGCAAGATCTGCACCAGAT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGATCAATATTTCTTCTCTaGACTGCCTCTGTGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRSIFLL*TASVWQ
Trigger: TTGCCACACAGAGGCAGTGCAGAGAAGAAATATTGA...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCATATCTGGCTCTAAATaGTACCAGGTGAGCATAATA +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPISGSK*YQVSII
Trigger: TATTATGCTCACCTGGTAGCATTTAGAGCCAGATAT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR GCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTGATGCCTCTATCAAGTaGCTTCCAAAACACTCAGTA +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLDASIK*LPKHSV
Trigger: TACTGAGTGTTTTGGAAGGCACTTGATAGAGGCATC...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTATGATGATTTGGTACTaGCTTTATGAGCAGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLMMIWY*LYEQSS
Trigger: GGAGGACTGCTCATAAAGGCAGTACCAAATCATCAT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCATCAGTCAGAGGTCTTaGTTGCTCATCAATATTATG +
Preference number: 4 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPISQRS*LLINIM
Trigger: CATAATATTGATGAGCAACCAAGACCTCTGACTGAT...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTGAAATCTTACGCAGCTaGTCTGTGAAACCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLEILRS*SVKPFN
Trigger: ATTGAAGGGTTTCACAGACCAGCTGCGTAAGATTTC...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAGTGAGCATAATACGCTaGTGCAGGTATAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRVSIIR*CRYRNR
Trigger: TCTGTTTCTATACCTGCACCAGCGTATTATGCTCAC...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CCA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATTTCCTCCAACACAGTTaGGAATTAAAAGAGGTAATT +
Preference number: 4 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNFLQHS*ELKEVI
Trigger: AATTACCTCTTTTAATTCCCAACTGTGTTGGAGGAA...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATTTCCCTTTGGACATTaGTACTATACCCATAATCTT +
Preference number: 4 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIFPFGH*YYTHNL
Trigger: AAGATTATGGGTATAGTACCAATGTCCAAAGGGAAA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTTTCACAGAGGCAAACTaGAAAGGAATCCTTCACACA +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLFTEAN*KGILHT
Trigger: TGTGTGAAGGATTCCTTTCCAGTTTGCCTCTGTGAA...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGATTGGTACTGCCTTTATaGGCAGTCCTCCTTAATAAT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRLVLPL*AVLLNN
Trigger: ATTATTAAGGAGGACTGCTCATAAAGGCAGTACCAA...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR TCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTTTCAAGGAGTTTAAATaGCAACCAAATCCAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLFKEFK*QPNPRP
Trigger: AGGCCTTGGATTTGGTTGTCATTTAAACTCCTTGAA...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTTATAGGAAATTTTTCTaGAGGAGATGGGAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLYRKFF*RRWEKA
Trigger: AGCCTTCTCCCATCTCCTCCAGAAAAATTTCCTATA...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAAAGAAAATAATTAGCTaGGTGTGGTGGCATGTACCT +
Preference number: 4 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRKKIIS*VWWHVP
Trigger: AGGTACATGCCACCACACCCAGCTAATTATTTTCTT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR GCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTCGTATGCAACATTTTTaGAGTCTTTCCTTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLRMQHF*SLSFFG
Trigger: ACCAAAGAAGGAAAGACTGCAAAAATGTTGCATACG...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CCA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTCCTAGGACACTTGTCTaGTTTAATATCTACCTCATA +
Preference number: 4 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLPRTLV*FNIYLI
Trigger: TATGAGGTAGATATTAAACCAGACAAGTGTCCTAGG...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
3UTR CAA 72 bp CTCTCAGTGGAATACACTACAGTAAAATGTCATACATaGAGCTCCAATAATTTAGAATTGAAAACCCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSVEYTTVKCHT*SSNNLELKTQR
Trigger: CCTCTGGGTTTTCAATTCTAAATTATTGGAGCTCAATGTATGACATTTTACTGTAGTGTATTCCACTGAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
3UTR CAA 72 bp GAATTTTACCCGATGAGAATCAGTCAGAGGTCTTGGTaGCTCATCAATATTATGAATATCAAGAACTTCACA +
Preference number: 4 (lower is better)
Translates to: EFYPMRISQRSW*LINIMNIKNFT
Trigger: TGTGAAGTTCTTGATATTCATAATATTGATGAGCAACCAAGACCTCTGACTGATTCTCATCGGGTAAAATTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS CCA 90 bp CTGGGCCCCAGCGGGTCCTGCGGAGCCGATTTCCATTCATGGAGCTaGGGGGAGTGCTTCGAGGGAGAACGGAGCCCGCCACTGGCGGCA +
Preference number: 5 (lower is better)
Translates to: LGPSGSCGADFHSWS*GECFEGERSPPLAA
Trigger: TGCCGCCAGTGGCGGGCTCCGTTCTCCCTCGAAGCACTCCCCCCAGCTCCATGAATGGAAATCGGCTCCGCAGGACCCGCTGGGGCCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000246314.10
ENST00000324350.9
ENST00000373191.9
ENST00000397828.3
ENST00000634486.1
CDS-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAGTCCCGTCCGGAAGTaGCATCGCCCGCGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: TLFFKERYQKSAKKQGITSPVRK*HRPRPP
Trigger: CGGCGGCCGCGGGCGATGCAACTTCCGGACGGGACT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCAGTCCCGTCCGGAAGTaGCATCGCCCGCGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFSPVRK*HRPRPP
Trigger: CGGCGGCCGCGGGCGATGCAACTTCCGGACGGGACT...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTCGGGGTTTCGCCATGTaGGCCAGGCTGGTCACGAAC +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVRGFAM*ARLVTN
Trigger: GTTCGTGACCAGCCTGGCCAACATGGCGAAACCCCG...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS CCA 90 bp CAGAAATTCATGGAGGGCAGATGTCGTAGCACCACATCAACGGCATaGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: QKFMEGRCRSTTSTA*TGLVLIGLSNSSGS
Trigger: TGAGCCACTGGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCTACGACATCTGCCCTCCATGAATTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000246314.10
CDS-3UTR CAA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCCTCCATGGCTCGGTGTaGCTACTGTCCGATTCCGTC +
Preference number: 5 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFLHGSV*LLSDSV
Trigger: GACGGAATCGGACAGTAGCAACACCGAGCCATGGAG...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCGTTCCAGCTGGGATATaGCCACTTCTTCCAACCCTT +
Preference number: 5 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSVPAGI*PLLPTL
Trigger: AAGGGTTGGAAGAAGTGGCAATATCCCAGCTGGAAC...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp AAGGTCCGTCCTGTCAGTACTTCATGCAGTAGGTGCCAACTCACCCGAGAGACATGTCTGTATCAACTGTaGTTCCAGCTGGGATATTGC +
Preference number: 5 (lower is better)
Translates to: KVRPVSTSCSRCQLTRETCLYQL*FQLGYC
Trigger: GCAATATCCCAGCTGGAACAACAGTTGATACAGACA...TGTCTCTCGGGTGAGTTGGCACCTACTGCATGAAGTACTGACAGGACGGACCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTGGCCCCCACACAGTGTaGGTTTCTGTATGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGGPHTV*VSVWLE
Trigger: CTCCAGCCATACAGAAACCAACACTGTGTGGGGGCC...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGCATAAGGATCAGACCTaGGCCCCCACACAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLHKDQT*APTQCW
Trigger: CCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATG...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATCTCCATGGCTCGGTGTaGCTACTGTCCGATTCCGTC +
Preference number: 5 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNLHGSV*LLSDSV
Trigger: GACGGAATCGGACAGTAGCAACACCGAGCCATGGAG...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp TCCATGCTCTTCGGGCAGCAGTTGAATCCTTGTTCTGTACATCTTGTATTTTCTGGCCCCCACACAGTGTaGGTTTCTGTATGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SMLFGQQLNPCSVHLVFSGPHTV*VSVWLE
Trigger: CTCCAGCCATACAGAAACCAACACTGTGTGGGGGCC...AGAAAATACAAGATGTACAGAACAAGGATTCAACTGCTGCCCGAAGAGCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGCGCTCACCCTTTCCTaGAACACAGAGATCCGCTGC +
Preference number: 5 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVALTLS*NTEIRC
Trigger: GCAGCGGATCTCTGTGTTCAAGGAAAGGGTGAGCGC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGTTTGGGCCCAGGAGTaGGAGGCTGTAGTGAGCTAT +
Preference number: 5 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFVWAQE*EAVVSY
Trigger: ATAGCTCACTACAGCCTCCAACTCCTGGGCCCAAAC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATAAGCAGGAGGATAGTTaGGGCCCAGGAGTTGGAGGC +
Preference number: 5 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNKQEDS*GPGVGG
Trigger: GCCTCCAACTCCTGGGCCCAAACTATCCTCCTGCTT...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATCTCCATGGCTCGGTGTaGCTACTGTCCGATTCCGTC +
Preference number: 5 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNLHGSV*LLSDSV
Trigger: GACGGAATCGGACAGTAGCAACACCGAGCCATGGAG...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAGCCTTGGCAAGAGCTaGTGGATCTCGCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: TLFFKERYQKSAKKQGITSLGKS*WISPIA
Trigger: AGCAATGGGCGAGATCCACAAGCTCTTGCCAAGGCT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCCATAAGGATCAGACCTaGGCCCCCACACAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: TLFFKERYQKSAKKQGITHKDQT*APTQCW
Trigger: CCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATG...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAGGCAGGAGAATTGCTaGAACCCGAGAGGCGGAAGT +
Preference number: 5 (lower is better)
Translates to: TLFFKERYQKSAKKQGITRQENC*NPRGGS
Trigger: ACTTCCGCCTCTCGGGTTCAAGCAATTCTCCTGCCT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTCATCTTCAGGACATTTaGCAGGCGGCCCCACCCTCC +
Preference number: 5 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAHLQDI*QAAPPS
Trigger: GGAGGGTGGGGCCGCCTGCAAAATGTCCTGAAGATG...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp GGTCATATCCTTCTGGAGCGGAGAAAAATGAACGCCCCACAGGTGTGTATTTCATTAGTGCTGATTGGCTaGTCTAATTCCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GHILLERRKMNAPQVCISLVLIG*SNSSGS
Trigger: TGAGCCACTGGAATTAGACAAGCCAATCAGCACTAA...TGAAATACACACCTGTGGGGCGTTCATTTTTCTCCGCTCCAGAAGGATATGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGATCTGCTAATTTCCTCTaGTCTATCTGGTGCAGATCT +
Preference number: 5 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGSANFL*SIWCRS
Trigger: AGATCTGCACCAGATAGACAAGAGGAAATTAGCAGA...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGTTCCAGCTGGGATATaGCCACTTCTTCCAACCCTT +
Preference number: 5 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFVPAGI*PLLPTL
Trigger: AAGGGTTGGAAGAAGTGGCAATATCCCAGCTGGAAC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTGTTCCAGCTGGGATATaGCCACTTCTTCCAACCCTT +
Preference number: 5 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGVPAGI*PLLPTL
Trigger: AAGGGTTGGAAGAAGTGGCAATATCCCAGCTGGAAC...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAAGCCTTGGCAAGAGCTaGTGGATCTCGCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCISLGKS*WISPIA
Trigger: AGCAATGGGCGAGATCCACAAGCTCTTGCCAAGGCT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTGGCCCCCACACAGTGTaGGTTTCTGTATGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAGPHTV*VSVWLE
Trigger: CTCCAGCCATACAGAAACCAACACTGTGTGGGGGCC...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATACATAAGGATCAGACCTaGGCCCCCACACAGTGTTGG +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIHKDQT*APTQCW
Trigger: CCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATG...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTGGGGTTTCAGCATGTaGGCCAGGATGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFWGFSM*ARMVSI
Trigger: GATGGAGACCATCCTGGCCAACATGCTGAAACCCCA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTAACTCCTGTGTGGAATaGTTTCCCTCGCATGTCCCA +
Preference number: 5 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVNSCVE*FPSHVP
Trigger: TGGGACATGCGAGGGAAACAATTCCACACAGGAGTT...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAACTCCTGTGTGGAATaGTTTCCCTCGCATGTCCCA +
Preference number: 5 (lower is better)
Translates to: TLFFKERYQKSAKKQGITNSCVE*FPSHVP
Trigger: TGGGACATGCGAGGGAAACAATTCCACACAGGAGTT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AGCAGTTATCATCCCATAAAACATGATAGTGTGAAGGACGACTGGTACCCTGTAAACTCCTGTGTGGAATaGTTTCCCTCGCATGTCCCA +
Preference number: 5 (lower is better)
Translates to: SSYHPIKHDSVKDDWYPVNSCVE*FPSHVP
Trigger: TGGGACATGCGAGGGAAACAATTCCACACAGGAGTT...TACAGGGTACCAGTCGTCCTTCACACTATCATGTTTTATGGGATGATAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTGCGATAGCCCACATTTaGATTTCAACTCCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGAIAHI*ISTPVW
Trigger: CCACACAGGAGTTGAAATCAAAATGTGGGCTATCGC...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAGTAGGTTATTCCAGGTaGATAGTCTTTCTCCAAACT +
Preference number: 5 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGVGYSR*IVFLQT
Trigger: AGTTTGGAGAAAGACTATCAACCTGGAATAACCTAC...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATCCATAATCTTGATCTaGGCCAGATGCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETSIILI*ARCSGS
Trigger: TGAGCCACTGCATCTGGCCAAGATCAAGATTATGGA...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATGGGCCCCTGAGCAGTaGAAGTTAAGATCGAGTCCA +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIWAPEQ*KLRSSP
Trigger: TGGACTCGATCTTAACTTCAACTGCTCAGGGGCCCA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGACTCTCCTAGGACACTaGTCTGGTTTAATATCTACC +
Preference number: 5 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLTLLGH*SGLIST
Trigger: GGTAGATATTAAACCAGACAAGTGTCCTAGGAGAGT...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp CCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGCCTCCTTTAGTGCTGATTGGCTaGTCTAATTCCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: PTLDHHHLLPELVIEKPPLVLIG*SNSSGS
Trigger: TGAGCCACTGGAATTAGACAAGCCAATCAGCACTAA...AGGAGGCTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CAA 90 bp AACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTTTCTGTATGGCTGGAAGTCAGAGGTCTTGGTaGCTCATCAATATTATGAAT +
Preference number: 5 (lower is better)
Translates to: NIRIRPWPPHSVGFCMAGSQRSW*LINIMN
Trigger: ATTCATAATATTGATGAGCAACCAAGACCTCTGACT...TCCAGCCATACAGAAACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTTTGTCTGTTAGCTTCTaGATACATCGTTGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVLSVSF*IHRCPA
Trigger: GGCAGGGCAACGATGTATCAAGAAGCTAACAGACAA...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp TCCATGCTCTTCGGGCAGCAGTTGAATCCTTGTTCTGTACATCTTGTATTTTCTTTGTCTGTTAGCTTCTaGATACATCGTTGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: SMLFGQQLNPCSVHLVFSLSVSF*IHRCPA
Trigger: GGCAGGGCAACGATGTATCAAGAAGCTAACAGACAA...AGAAAATACAAGATGTACAGAACAAGGATTCAACTGCTGCCCGAAGAGCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGCGATAGCCCACATTTaGATTTCAACTCCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVAIAHI*ISTPVW
Trigger: CCACACAGGAGTTGAAATCAAAATGTGGGCTATCGC...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AGCACCACATCAACGGCATGGACAGGGTTAGTGCTGATTGGCTTGTCTAATTCCTGCAGGCTTCTCGAATaGCTAGTAGTTCATAATATA +
Preference number: 5 (lower is better)
Translates to: STTSTAWTGLVLIGLSNSCRLLE*LVVHNI
Trigger: TATATTATGAACTACTAGCAATTCGAGAAGCCTGCA...GGAATTAGACAAGCCAATCAGCACTAACCCTGTCCATGCCGTTGATGTGGTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp CACAGTGTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGGTGTCCTTACTCAATaGACTTCACTGGAAACATAC +
Preference number: 5 (lower is better)
Translates to: HSVGFCMAGGVLTQLTSLGVLTQ*TSLETY
Trigger: GTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACC...CAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAACACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp CTCCATCCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGTCAGGTCTCACTATGTaGTTCAGCCTGATCGCAAAC +
Preference number: 5 (lower is better)
Translates to: LHPTLDHHHLLPELVIEKSGLTM*FSLIAN
Trigger: GTTTGCGATCAGGCTGAACAACATAGTGAGACCTGA...CTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGGATGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CAA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGATCCATCAAGTTCCTaGAGTCACAAACGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETDPSSS*SHKRSL
Trigger: TAGAGACCGTTTGTGACTCAAGGAACTTGATGGATC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATATGTGGGAGAAGCACTaGAGCTTAGGAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNMWEKH*SLGVQD
Trigger: GTCTTGAACTCCTAAGCTCAAGTGCTTCTCCCACAT...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTCTCTTCGGGCAGCAGTaGAATCCTTGTTCTGTACAT +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVLFGQQ*NPCSVH
Trigger: ATGTACAGAACAAGGATTCAACTGCTGCCCGAAGAG...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp CCCACATTAGACCATCACCATCTCTTACCTGAACTAGTGATTGAAAAGCCTCCTACTCTCCTAGGACACTaGTCTGGTTTAATATCTACC +
Preference number: 5 (lower is better)
Translates to: PTLDHHHLLPELVIEKPPTLLGH*SGLIST
Trigger: GGTAGATATTAAACCAGACAAGTGTCCTAGGAGAGT...AGGAGGCTTTTCAATCACTAGTTCAGGTAAGAGATGGTGATGGTCTAATGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CAA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCACTCTCCTAGGACACTaGTCTGGTTTAATATCTACC +
Preference number: 5 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFTLLGH*SGLIST
Trigger: GGTAGATATTAAACCAGACAAGTGTCCTAGGAGAGT...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GAGATCAGGTCTCACTATGTTGTTCAGCCTGATCGCAAACTCCTAATCTCAAGTACCCGAGAGACAAATTaGATTGACACCTTGAAAGGT +
Preference number: 5 (lower is better)
Translates to: EIRSHYVVQPDRKLLISSTRETN*IDTLKG
Trigger: ACCTTTCAAGGTGTCAATCAAATTTGTCTCTCGGGT...ACTTGAGATTAGGAGTTTGCGATCAGGCTGAACAACATAGTGAGACCTGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000324350.9
CDS-3UTR CAA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACAGAACTGAATTACAGGTaGTGCTTTGTAGAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETELNYR*CFVEGS
Trigger: ACTGCCTTCTACAAAGCACAACCTGTAATTCAGTTC...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTTGTCTGTTAGCTTCTaGATACATCGTTGCCCTGCC +
Preference number: 5 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFLSVSF*IHRCPA
Trigger: GGCAGGGCAACGATGTATCAAGAAGCTAACAGACAA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCGCGATAGCCCACATTTaGATTTCAACTCCTGTGTGG +
Preference number: 5 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFAIAHI*ISTPVW
Trigger: CCACACAGGAGTTGAAATCAAAATGTGGGCTATCGC...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTCTTGACTTGAACACATaGTGTAGCCATACCCAAAAG +
Preference number: 5 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGLDLNT*CSHTQK
Trigger: CTTTTGGGTATGGCTACACAATGTGTTCAAGTCAAG...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCCTTGACTTGAACACATaGTGTAGCCATACCCAAAAG +
Preference number: 5 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFLDLNT*CSHTQK
Trigger: CTTTTGGGTATGGCTACACAATGTGTTCAAGTCAAG...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAAGCCTTGGCAAGAGCTaGTGGATCTCGCCCATTGCT +
Preference number: 5 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRSLGKS*WISPIA
Trigger: AGCAATGGGCGAGATCCACAAGCTCTTGCCAAGGCT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATCCGCACAAAAAGCAGTaGGCTGGTTTCATATTGCAT +
Preference number: 5 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNPHKKQ*AGFILH
Trigger: ATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGG...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGGTCTAACACTAGCCTaGAATCCTGCTTATCTCCTT +
Preference number: 5 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVGLTLA*NPAYLL
Trigger: AAGGAGATAAGCAGGATTCAAGGCTAGTGTTAGACC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAACAGGAAGGCGTTACTaGATGTCAAACCTCCCAACA +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCITGRRY*MSNLPT
Trigger: TGTTGGGAGGTTTGACATCAAGTAACGCCTTCCTGT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCCACTTTCCCATTTCCTaGCCTCTCAGTGGAATACAC +
Preference number: 5 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFHFPIS*PLSGIH
Trigger: GTGTATTCCACTGAGAGGCAAGGAAATGGGAAAGTG...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTTTTGTTAGCAATGAGTaGGAAAAGCCCAACTGCCTG +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVFVSNE*EKPNCL
Trigger: CAGGCAGTTGGGCTTTTCCAACTCATTGCTAACAAA...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTACCCGAGAGACAAATTaGATTGACACCTTGAAAGGT +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVTRETN*IDTLKG
Trigger: ACCTTTCAAGGTGTCAATCAAATTTGTCTCTCGGGT...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCTTAGTGCTGATTGGCTaGTCTAATTCCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFLVLIG*SNSSGS
Trigger: TGAGCCACTGGAATTAGACAAGCCAATCAGCACTAA...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGAACTGAATTACAGGTaGTGCTTTGTAGAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVELNYR*CFVEGS
Trigger: ACTGCCTTCTACAAAGCACAACCTGTAATTCAGTTC...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTTCTTTAGGCACAAGTTaGACAGAGTTTGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVSLGTS*TEFEEM
Trigger: CATCTCCTCAAACTCTGTCAAACTTGTGCCTAAAGA...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTCAAAAAGATCACTGGTaGCTGGAACACAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLAQKDHW*LEHRRS
Trigger: AGACCTTCTGTGTTCCAGCAACCAGTGATCTTTTTG...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATGTCTGTATCAACTGTaGTTCCAGCTGGGATATTGC +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCICLYQL*FQLGYC
Trigger: GCAATATCCCAGCTGGAACAACAGTTGATACAGACA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGAGGTGTCCTTACTCAATaGACTTCACTGGAAACATAC +
Preference number: 5 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGGVLTQ*TSLETY
Trigger: GTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACC...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATCCGCACAAAAAGCAGTaGGCTGGTTTCATATTGCAT +
Preference number: 5 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNPHKKQ*AGFILH
Trigger: ATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGG...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GTTGGTTTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACACAGATACATCAACATTaGAATGTCACTGGTAGGACT +
Preference number: 5 (lower is better)
Translates to: VGFCMAGGVLTQLTSLETQIHQH*NVTGRT
Trigger: AGTCCTACCAGTGACATTCAAATGTTGATGTATCTG...TGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAAACCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246314.10
ENST00000373191.9
CDS-3UTR CAA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTTTCCTGGGACTCAGCTaGGCTTTCACTAATCACAGT +
Preference number: 5 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAFLGLS*AFTNHS
Trigger: ACTGTGATTAGTGAAAGCCAAGCTGAGTCCCAGGAA...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCTTTCCTTGGTTCCCTaGGACGAGATTCAAGACAAC +
Preference number: 5 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPLSLVP*DEIQDN
Trigger: GTTGTCTTGAATCTCGTCCAAGGGAACCAAGGAAAG...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTCCCCTTAAGCACAATTaGCAGACCCTACTTCTATTT +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVPLKHN*QTLLLF
Trigger: AAATAGAAGTAGGGTCTGCAAATTGTGCTTAAGGGG...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATCCAATATCCATAATCTaGATCTTGGCCAGATGCAGT +
Preference number: 5 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNPISII*ILARCS
Trigger: ACTGCATCTGGCCAAGATCAAGATTATGGATATTGG...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp GGAAAGAAGTGCCTAGGTGATCATTTACTGCTATTTACTGCTTCCTGGTATGGATGCAGGTGCTCAGAATaGAATTCACATGAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: GKKCLGDHLLLFTASWYGCRCSE*NSHEAE
Trigger: TTCTGCTTCATGTGAATTCAATTCTGAGCACCTGCA...TCCATACCAGGAAGCAGTAAATAGCAGTAAATGATCACCTAGGCACTTCTTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTTGCAACAAGGGGAGGTaGGCATCTGTGGAGATAAAA +
Preference number: 5 (lower is better)
Translates to: KCKAPLNPMLLINSVLIACNKGR*ASVEIK
Trigger: TTTTATCTCCACAGATGCCAACCTCCCCTTGTTGCA...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp CTGCTTCCTGGTATGGAGCAAAATTGCCCTCTGGTAGGTAACTACATTTCTAATATGCAGATGCCAGCTTaGTTAGCAATGAGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: LLPGMEQNCPLVGNYISNMQMPA*LAMSWK
Trigger: TTTCCAACTCATTGCTAACAAAGCTGGCATCTGCAT...ATTAGAAATGTAGTTACCTACCAGAGGGCAATTTTGCTCCATACCAGGAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCGCAGCAGTTGAATCCTaGTTCTGTACATCTTGTATT +
Preference number: 5 (lower is better)
Translates to: NNCDTSYRRPHKKQLAGFAAVES*FCTSCI
Trigger: AATACAAGATGTACAGAACAAGGATTCAACTGCTGC...GAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS CCA 90 bp CTGTCATCATTTTTCACATGGATCACTGACTCCGCTAATAGCTTGTaGAACTTGAAAATCCTACCATGCAGACAATATTGGGATTTGGGT +
Preference number: 5 (lower is better)
Translates to: LSSFFTWITDSANSL*NLKILPCRQYWDLG
Trigger: ACCCAAATCCCAATATTGTCTGCATGGTAGGATTTTCAAGTTCCACAAGCTATTAGCGGAGTCAGTGATCCATGTGAAAAATGATGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS-3UTR CAA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCACTCTCCTAGGACACTaGTCTGGTTTAATATCTACC +
Preference number: 5 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFTLLGH*SGLIST
Trigger: GGTAGATATTAAACCAGACAAGTGTCCTAGGAGAGT...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp AATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCACACAGTGTTGGTAATTTGATTGACACCTaGAAAGGTCGATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: NLPCINIRIRPWPPHSVGNLIDT*KGRSFP
Trigger: TGGAAAAGATCGACCTTTCAAGGTGTCAATCAAATT...ACCAACACTGTGTGGGGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAACCCGAGAGACAAATTaGATTGACACCTTGAAAGGT +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCITRETN*IDTLKG
Trigger: ACCTTTCAAGGTGTCAATCAAATTTGTCTCTCGGGT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTTCTGCTAATTTCCTCTaGTCTATCTGGTGCAGATCT +
Preference number: 5 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLASANFL*SIWCRS
Trigger: AGATCTGCACCAGATAGACAAGAGGAAATTAGCAGA...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCAAAAAGATCACTGGTaGCTGGAACACAGAAGGTCT +
Preference number: 5 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPQKDHW*LEHRRS
Trigger: AGACCTTCTGTGTTCCAGCAACCAGTGATCTTTTTG...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCGTAGGTTATTCCAGGTaGATAGTCTTTCTCCAAACT +
Preference number: 5 (lower is better)
Translates to: TLFFKERYQKSAKKQGITVGYSR*IVFLQT
Trigger: AGTTTGGAGAAAGACTATCAACCTGGAATAACCTAC...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCCCGCACAAAAAGCAGTaGGCTGGTTTCATATTGCAT +
Preference number: 5 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPPHKKQ*AGFILH
Trigger: ATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGG...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCTGTGGAGAAGCTAGCTaGGAAACTGGTCTAGATCTT +
Preference number: 5 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPCGEAS*ETGLDL
Trigger: AAGATCTAGACCAGTTTCCAAGCTAGCTTCTCCACA...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCAAGTTACATTTCCCTTaGGACATTGGTACTATACCC +
Preference number: 5 (lower is better)
Translates to: TLFFKERYQKSAKKQGITKLHFP*DIGTIP
Trigger: GGGTATAGTACCAATGTCCAAAGGGAAATGTAACTT...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTTCTTTCCCAAGTATTTaGAGAGTGTCATTTACCCCC +
Preference number: 5 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLASFPSI*RVSFTP
Trigger: GGGGGTAAATGACACTCTCAAAATACTTGGGAAAGA...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGATCTTATAGCCCACGCTaGACTAGGAACTGGGATGAG +
Preference number: 5 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRSYSPR*TRNWDE
Trigger: CTCATCCCAGTTCCTAGTCAAGCGTGGGCTATAAGA...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS GCA 90 bp ATCACTGACTCCGCTAATAGCTTGTGGAACTTGAAAATCCTACCATaGAGACAATATTGGGATTTGGGTGAGAACCTGTTATGCTTTTAT +
Preference number: 5 (lower is better)
Translates to: ITDSANSLWNLKILP*RQYWDLGENLLCFY
Trigger: ATAAAAGCATAACAGGTTCTCACCCAAATCCCAATATTGTCTGCATGGTAGGATTTTCAAGTTCCACAAGCTATTAGCGGAGTCAGTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS-3UTR CAA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGAACTGAATTACAGGTaGTGCTTTGTAGAAGGCAGT +
Preference number: 5 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPELNYR*CFVEGS
Trigger: ACTGCCTTCTACAAAGCACAACCTGTAATTCAGTTC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTAGTCAGAGGTCTTGGTaGCTCATCAATATTATGAAT +
Preference number: 5 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVSQRSW*LINIMN
Trigger: ATTCATAATATTGATGAGCAACCAAGACCTCTGACT...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AATACTGCGCTACTGTTCTCTCCACAGTTTGGCCGTTTTCTAACTGTAAAGGAAAGTCAGAGGTCTTGGTaGCTCATCAATATTATGAAT +
Preference number: 5 (lower is better)
Translates to: NTALLFSPQFGRFLTVKESQRSW*LINIMN
Trigger: ATTCATAATATTGATGAGCAACCAAGACCTCTGACT...TTCCTTTACAGTTAGAAAACGGCCAAACTGTGGAGAGAACAGTAGCGCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTAATCAGTCAGAGGTCTaGGTTGCTCATCAATATTAT +
Preference number: 5 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVNQSEV*VAHQYY
Trigger: ATAATATTGATGAGCAACCAAGACCTCTGACTGATT...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTTCTTTAGGCACAAGTTaGACAGAGTTTGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: KCKAPLNPMLLINSVLIASLGTS*TEFEEM
Trigger: CATCTCCTCAAACTCTGTCAAACTTGTGCCTAAAGA...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTGAACACAGAAGGTCTTaGATGAGGTACAAGAATATT +
Preference number: 5 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVEHRRS*MRYKNI
Trigger: AATATTCTTGTACCTCATCAAAGACCTTCTGTGTTC...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp TTCTGTATGGCTGGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGAACACAGAAGGTCTTaGATGAGGTACAAGAATATT +
Preference number: 5 (lower is better)
Translates to: FCMAGGVLTQLTSLETYVEHRRS*MRYKNI
Trigger: AATATTCTTGTACCTCATCAAAGACCTTCTGTGTTC...AACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCCAGCCATACAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTGCAGGCTTCTCGAATaGCTAGTAGTTCATAATATA +
Preference number: 5 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVCRLLE*LVVHNI
Trigger: TATATTATGAACTACTAGCAATTCGAGAAGCCTGCA...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ACCCTCTTCTTCAAAGAAAGGTACCAAAAATCGGCCAAGAAACAGGGAATAACCTGCAGGCTTCTCGAATaGCTAGTAGTTCATAATATA +
Preference number: 5 (lower is better)
Translates to: TLFFKERYQKSAKKQGITCRLLE*LVVHNI
Trigger: TATATTATGAACTACTAGCAATTCGAGAAGCCTGCA...GGTTATTCCCTGTTTCTTGGCCGATTTTTGGTACCTTTCTTTGAAGAAGAGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTCACTGGAAACATACGTaGTATGTCAATTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: KTIAILPIGDRTKSSWLVHWKHT*YVNSSF
Trigger: GAAAGATGAATTGACATACAACGTATGTTTCCAGTG...AACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GGAGGTGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCCAGATACATCAACATTaGAATGTCACTGGTAGGACT +
Preference number: 5 (lower is better)
Translates to: GGVLTQLTSLETYVVCQFQIHQH*NVTGRT
Trigger: AGTCCTACCAGTGACATTCAAATGTTGATGTATCTG...GAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACACCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246314.10
ENST00000373191.9
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGGTCATATTACCATaGAGTCCCCCAAACACTAAA +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCIMVILP*SPPNTK
Trigger: TTTAGTGTTTGGGGGACTCAATGGTAATATGACCAT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATATGTTGTTGTTGTTATTaGCCTCCCAACAGGAAACAA +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCICCCCY*PPNRKQ
Trigger: TTGTTTCCTGTTGGGAGGCAAATAACAACAACAACA...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS TCA 90 bp GTGGAACTTGAAAATCCTACCATGCAGACAATATTGGGATTTGGGTaGGAACCTGTTATGCTTTTATATTACCTGTCATGTTCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: VELENPTMQTILGFG*EPVMLLYYLSCSLS
Trigger: GGACAAAGAACATGACAGGTAATATAAAAGCATAACAGGTTCTCACCCAAATCCCAATATTGTCTGCATGGTAGGATTTTCAAGTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS-3UTR CAA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTTTAGTGCTGATTGGCTaGTCTAATTCCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLLVLIG*SNSSGS
Trigger: TGAGCCACTGGAATTAGACAAGCCAATCAGCACTAA...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAAATCAGTCAGAGGTCTaGGTTGCTCATCAATATTAT +
Preference number: 5 (lower is better)
Translates to: ILPIGDRTKSSWLVSYCINQSEV*VAHQYY
Trigger: ATAATATTGATGAGCAACCAAGACCTCTGACTGATT...TATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp ACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTGGTTTCATATTGCATAATGGTACAAGAATATTATaGATCCCTCCGAGTTTAACA +
Preference number: 5 (lower is better)
Translates to: TSYRRPHKKQLAGFILHNGTRIL*IPPSLT
Trigger: TGTTAAACTCGGAGGGATCAATAATATTCTTGTACC...ATTATGCAATATGAAACCAGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp TACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAGGCTTCGGTACAAGAATATTATaGATCCCTCCGAGTTTAACA +
Preference number: 5 (lower is better)
Translates to: YNVGYSRLIVFLQTDAGFGTRIL*IPPSLT
Trigger: TGTTAAACTCGGAGGGATCAATAATATTCTTGTACC...GAAGCCTGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp CTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACCTTGGCCCGTAGGTTATTCCAGGTaGATAGTCTTTCTCCAAACT +
Preference number: 5 (lower is better)
Translates to: LDEVNNLPCINIRIRPWPVGYSR*IVFLQT
Trigger: AGTTTGGAGAAAGACTATCAACCTGGAATAACCTAC...GGGCCAAGGTCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGATGTCTGTATCAACTGTaGTTCCAGCTGGGATATTGC +
Preference number: 5 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRCLYQL*FQLGYC
Trigger: GCAATATCCCAGCTGGAACAACAGTTGATACAGACA...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AAACAAAACAATTGCGATACTTCCTATAGGAGACCGCACAAAAAGCAGTTGGCTCTCTTGGCTGATTTTTaGACTCCTATAGAATCACAA +
Preference number: 5 (lower is better)
Translates to: KQNNCDTSYRRPHKKQLALLADF*TPIESQ
Trigger: TTGTGATTCTATAGGAGTCAAAAAATCAGCCAAGAG...AGCCAACTGCTTTTTGTGCGGTCTCCTATAGGAAGTATCGCAATTGTTTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS GCA 90 bp ATCCTACCATGCAGACAATATTGGGATTTGGGTGAGAACCTGTTATaGTTTTATATTACCTGTCATGTTCTTTGTCCACAAGATGATATC +
Preference number: 5 (lower is better)
Translates to: ILPCRQYWDLGENLL*FYITCHVLCPQDDI
Trigger: GATATCATCTTGTGGACAAAGAACATGACAGGTAATATAAAAGCATAACAGGTTCTCACCCAAATCCCAATATTGTCTGCATGGTAGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS CCA 90 bp AGGAAGTGGATTGGCGGTGTAAAGACTTCTTTTTCCATCATAAACTaGTCTACGGTCTCCAAATATAGTTACTTTAAAATGCTGAACCAT +
Preference number: 5 (lower is better)
Translates to: RKWIGGVKTSFSIIN*STVSKYSYFKMLNH
Trigger: ATGGTTCAGCATTTTAAAGTAACTATATTTGGAGACCGTAGACCAGTTTATGATGGAAAAAGAAGTCTTTACACCGCCAATCCACTTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324350.9
ENST00000373191.9
ENST00000397828.3
ENST00000491443.2
CDS-3UTR CAA 90 bp CTGAACTACAATGTAGGTTATTCCAGGTTGATAGTCTTTCTCCAAACTGATGCAAATCAGTCAGAGGTCTaGGTTGCTCATCAATATTAT +
Preference number: 5 (lower is better)
Translates to: LNYNVGYSRLIVFLQTDANQSEV*VAHQYY
Trigger: ATAATATTGATGAGCAACCAAGACCTCTGACTGATT...TGCATCAGTTTGGAGAAAGACTATCAACCTGGAATAACCTACATTGTAGTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000634486.1
CDS-3UTR CAA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTTCTGCTAATTTCCTCTaGTCTATCTGGTGCAGATCT +
Preference number: 5 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLSANFL*SIWCRS
Trigger: AGATCTGCACCAGATAGACAAGAGGAAATTAGCAGA...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGACTTGACTTGAACACATaGTGTAGCCATACCCAAAAG +
Preference number: 5 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRLDLNT*CSHTQK
Trigger: CTTTTGGGTATGGCTACACAATGTGTTCAAGTCAAG...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGATCTTTAGGCACAAGTTaGACAGAGTTTGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRSLGTS*TEFEEM
Trigger: CATCTCCTCAAACTCTGTCAAACTTGTGCCTAAAGA...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTGGTACAAGAATATTATaGATCCCTCCGAGTTTAACA +
Preference number: 5 (lower is better)
Translates to: KCKAPLNPMLLINSVLIAGTRIL*IPPSLT
Trigger: TGTTAAACTCGGAGGGATCAATAATATTCTTGTACC...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTGCACCCTTTGTTACTTaGATATTCCGTGTCCTTACT +
Preference number: 5 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLAPFVT*IFRVLT
Trigger: AGTAAGGACACGGAATATCAAAGTAACAAAGGGTGC...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp AAGTGCAAAGCTCCCCTGAATCCAATGTTACTGATAAACTCAGTTTTGATAGCTACATGTCTGCTAACCTaGGACATGTTGAAATGTAAT +
Preference number: 5 (lower is better)
Translates to: KCKAPLNPMLLINSVLIATCLLT*DMLKCN
Trigger: ATTACATTTCAACATGTCCAAGGTTAGCAGACATGT...AGCTATCAAAACTGAGTTTATCAGTAACATTGGATTCAGGGGAGCTTTGCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTAACCAAAGCTTCCTTTaGTTAAACTCCCTGGGATCA +
Preference number: 5 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLNQSFL*LNSLGS
Trigger: TGATCCCAGGGAGTTTAACAAAAGGAAGCTTTGGTT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTAAATGCATAAGCCTGTaGAAATGTAAGGACCTGCCA +
Preference number: 5 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLKCISL*KCKDLP
Trigger: TGGCAGGTCCTTACATTTCAACAGGCTTATGCATTT...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS-3UTR CAA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGATGTTGCAACAAAGAATaGTTTACACTCCCTGCAGTG +
Preference number: 5 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRCCNKE*FTLPAV
Trigger: CACTGCAGGGAGTGTAAACAATTCTTTGTTGCAACA...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS CCA 90 bp CTTGTCTGGTTTAATATCTACCTCATAGAGGTAGACATCAATCTTTaGGATTTCAACTTGAAAACAGTTAGCCAGCAGTTTAATGGGTTT +
Preference number: 5 (lower is better)
Translates to: LVWFNIYLIEVDINL*DFNLKTVSQQFNGF
Trigger: AAACCCATTAAACTGCTGGCTAACTGTTTTCAAGTTGAAATCCCAAAGATTGATGTCTACCTCTATGAGGTAGATATTAAACCAGACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246314.10
ENST00000324350.9
ENST00000373191.9
ENST00000397828.3
ENST00000634486.1
CDS-3UTR CAA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAGAACACAGAAGGTCTTaGATGAGGTACAAGAATATT +
Preference number: 5 (lower is better)
Translates to: AVFLDEVNNLPCINIRIREHRRS*MRYKNI
Trigger: AATATTCTTGTACCTCATCAAAGACCTTCTGTGTTC...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp TGTCCTTACTCAATTGACTTCACTGGAAACATACGTTGTATGTCAATTCATCTTCACTGGAAACATACGTaGTATGTCAATTCATCTTTC +
Preference number: 5 (lower is better)
Translates to: CPYSIDFTGNIRCMSIHLHWKHT*YVNSSF
Trigger: GAAAGATGAATTGACATACAACGTATGTTTCCAGTG...AAGATGAATTGACATACAACGTATGTTTCCAGTGAAGTCAATTGAGTAAGGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000246314.10
ENST00000373191.9
ENST00000634486.1
CDS-3UTR CAA 90 bp GCTGTGTTCCTTGATGAAGTAAACAATCTTCCTTGTATTAACATAAGGATCAGAACTCTGATTTCTTCATaGATACTCAGGGATTCAATC +
Preference number: 5 (lower is better)
Translates to: AVFLDEVNNLPCINIRIRTLISS*ILRDSI
Trigger: GATTGAATCCCTGAGTATCAATGAAGAAATCAGAGT...TCTGATCCTTATGTTAATACAAGGAAGATTGTTTACTTCATCAAGGAACACAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000373191.9
CDS CCA 72 bp AGCGGGTCCTGCGGAGCCGATTTCCATTCATGGAGCTaGGGGGAGTGCTTCGAGGGAGAACGGAGCCCGCCA +
Preference number: 6 (lower is better)
Translates to: SGSCGADFHSWS*GECFEGERSPP
Trigger: TGGCGGGCTCCGTTCTCCCTCGAAGCACTCCCCCCAGCTCCATGAATGGAAATCGGCTCCGCAGGACCCGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000246314.10
ENST00000324350.9
ENST00000373191.9
ENST00000397828.3
ENST00000634486.1
CDS CCA 72 bp AACCACCTCCCTGTTCACTCTCCTAGGACACTTGTCTaGTTTAATATCTACCTCATAGAGGTAGACATCAAT +
Preference number: 6 (lower is better)
Translates to: NHLPVHSPRTLV*FNIYLIEVDIN
Trigger: ATTGATGTCTACCTCTATGAGGTAGATATTAAACCAGACAAGTGTCCTAGGAGAGTGAACAGGGAGGTGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324350.9
ENST00000373191.9
ENST00000397828.3
CDS TCA 72 bp GCTGATCCTACATTTCACTACTTTCACCTTGAAATATaGCTTAAGCAGTCATTCAGAGCAGACTACGCAGGT +
Preference number: 6 (lower is better)
Translates to: ADPTFHYFHLEI*LKQSFRADYAG
Trigger: ACCTGCGTAGTCTGCTCTGAATGACTGCTTAAGTCATATTTCAAGGTGAAAGTAGTGAAATGTAGGATCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS GCA 72 bp TCCGCTAATAGCTTGTGGAACTTGAAAATCCTACCATaGAGACAATATTGGGATTTGGGTGAGAACCTGTTA +
Preference number: 6 (lower is better)
Translates to: SANSLWNLKILP*RQYWDLGENLL
Trigger: TAACAGGTTCTCACCCAAATCCCAATATTGTCTGCATGGTAGGATTTTCAAGTTCCACAAGCTATTAGCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS CCA 72 bp TGGGTGTGTAATGTCTGTATCAACTGTTGTTCCAGCTaGGATATTGCCACTTCTTCCAACCTAGATTTGTTT +
Preference number: 6 (lower is better)
Translates to: WVCNVCINCCSS*DIATSSNLDLF
Trigger: AAACAAATCTAGGTTGGAAGAAGTGGCAATATCCCAGCTGGAACAACAGTTGATACAGACATTACACACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS CAA 72 bp ACATGGATCACTGACTCCGCTAATAGCTTGTGGAACTaGAAAATCCTACCATGCAGACAATATTGGGATTTG +
Preference number: 6 (lower is better)
Translates to: TWITDSANSLWN*KILPCRQYWDL
Trigger: CAAATCCCAATATTGTCTGCATGGTAGGATTTTCAAGTTCCACAAGCTATTAGCGGAGTCAGTGATCCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS CAA 90 bp AATATCTACCTCATAGAGGTAGACATCAATCTTTGGGATTTCAACTaGAAAACAGTTAGCCAGCAGTTTAATGGGTTTGCCCATGGTGCC +
Preference number: 6 (lower is better)
Translates to: NIYLIEVDINLWDFN*KTVSQQFNGFAHGA
Trigger: GGCACCATGGGCAAACCCATTAAACTGCTGGCTAACTGTTTTCAAGTTGAAATCCCAAAGATTGATGTCTACCTCTATGAGGTAGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246314.10
ENST00000324350.9
ENST00000373191.9
ENST00000397828.3
ENST00000634486.1
CDS CAA 90 bp TCATTTTTCACATGGATCACTGACTCCGCTAATAGCTTGTGGAACTaGAAAATCCTACCATGCAGACAATATTGGGATTTGGGTGAGAAC +
Preference number: 6 (lower is better)
Translates to: SFFTWITDSANSLWN*KILPCRQYWDLGEN
Trigger: GTTCTCACCCAAATCCCAATATTGTCTGCATGGTAGGATTTTCAAGTTCCACAAGCTATTAGCGGAGTCAGTGATCCATGTGAAAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS CCA 72 bp TTTTTCACATGGATCACTGACTCCGCTAATAGCTTGTaGAACTTGAAAATCCTACCATGCAGACAATATTGG +
Preference number: 6 (lower is better)
Translates to: FFTWITDSANSL*NLKILPCRQYW
Trigger: CCAATATTGTCTGCATGGTAGGATTTTCAAGTTCCACAAGCTATTAGCGGAGTCAGTGATCCATGTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS CAA 72 bp CTCATAGAGGTAGACATCAATCTTTGGGATTTCAACTaGAAAACAGTTAGCCAGCAGTTTAATGGGTTTGCC +
Preference number: 6 (lower is better)
Translates to: LIEVDINLWDFN*KTVSQQFNGFA
Trigger: GGCAAACCCATTAAACTGCTGGCTAACTGTTTTCAAGTTGAAATCCCAAAGATTGATGTCTACCTCTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000246314.10
ENST00000324350.9
ENST00000373191.9
ENST00000397828.3
ENST00000634486.1
CDS CCA 72 bp CTAAATCTACCTGTTCACTCTCCTAGGACACTTGTCTaGTTTAATATCTACCTCATAGAGGTAGACATCAAT +
Preference number: 6 (lower is better)
Translates to: LNLPVHSPRTLV*FNIYLIEVDIN
Trigger: ATTGATGTCTACCTCTATGAGGTAGATATTAAACCAGACAAGTGTCCTAGGAGAGTGAACAGGTAGATTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000246314.10
ENST00000634486.1
CDS CAA 72 bp TCATTTTTCACATGGATCACTGACTCCGCTAATAGCTaGTGGAACTTGAAAATCCTACCATGCAGACAATAT +
Preference number: 6 (lower is better)
Translates to: SFFTWITDSANS*WNLKILPCRQY
Trigger: ATATTGTCTGCATGGTAGGATTTTCAAGTTCCACAAGCTATTAGCGGAGTCAGTGATCCATGTGAAAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS TCA 72 bp TTCAAACCTTTTATCTCTTTGGTGAATTTTACCCGATaGGAATCAGTCAGAGGTCTTGGTTGCTCATCAATA +
Preference number: 6 (lower is better)
Translates to: FKPFISLVNFTR*ESVRGLGCSSI
Trigger: TATTGATGAGCAACCAAGACCTCTGACTGATTCTCATCGGGTAAAATTCACCAAAGAGATAAAAGGTTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000246314.10
ENST00000373191.9
CDS TCA 72 bp GAAAATCCTACCATGCAGACAATATTGGGATTTGGGTaGGAACCTGTTATGCTTTTATATTACCTGTCATGT +
Preference number: 6 (lower is better)
Translates to: ENPTMQTILGFG*EPVMLLYYLSC
Trigger: ACATGACAGGTAATATAAAAGCATAACAGGTTCTCACCCAAATCCCAATATTGTCTGCATGGTAGGATTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000471099.1
CDS CCA 72 bp ATTGGCGGTGTAAAGACTTCTTTTTCCATCATAAACTaGTCTACGGTCTCCAAATATAGTTACTTTAAAATG +
Preference number: 6 (lower is better)
Translates to: IGGVKTSFSIIN*STVSKYSYFKM
Trigger: CATTTTAAAGTAACTATATTTGGAGACCGTAGACCAGTTTATGATGGAAAAAGAAGTCTTTACACCGCCAAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324350.9
ENST00000373191.9
ENST00000397828.3
ENST00000491443.2