RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000123908

Ensembl transcript IDs: ENST00000220592.10, ENST00000517293.5, ENST00000518019.1, ENST00000519347.1, ENST00000519980.5, ENST00000520412.1, ENST00000520628.1, ENST00000521325.1, ENST00000523609.5, ENST00000524328.1

Found 1072 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGACAGCCCAAGGCCAGCCCAGCGGACCCAAGCAGCCTGTACCCTaGGCCGGCAGGCAGTGGGACACCCACGGGGGCCCAAGCCTCTTG +
Preference number: 1 (lower is better)
Translates to: LTAQGQPSGPKQPVP*AGRQWDTHGGPSLL
Trigger: CAAGAGGCTTGGGCCCCCGTGGGTGTCCCACTGCCTGCCGGCCCAGGGTACAGGCTGCTTGGGTCCGCTGGGCTGGCCTTGGGCTGTCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CAGGGAGGGTGGCGAGCGGCGCGGAGGGCACATCCGTCCCTCCCATaGGTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTC +
Preference number: 1 (lower is better)
Translates to: QGGWRAARRAHPSLP*VHAAQSPRGKRVAV
Trigger: GACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTACCCATGGGAGGGACGGATGTGCCCTCCGCGCCGCTCGCCACCCTCCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATaGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGG +
Preference number: 1 (lower is better)
Translates to: EGRCWQNTAPADASA*PPALSRGTWVSHAR
Trigger: CCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR TCA 90 bp CCTGCTATCCTTGGGCCTCCCAGGGCCAGGCAAGCTCCTTCGCTGTaGCCGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTC +
Preference number: 1 (lower is better)
Translates to: PAILGPPRARQAPSL*PTASRPAEPPPTAF
Trigger: GAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCGGTCACAGCGAAGGAGCTTGCCTGGCCCTGGGAGGCCCAAGGATAGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp CCTGGGCCGGCAGGCAGTGGGACACCCACGGGGGCCCAAGCCTCTTaGGGTCGGTCCGCACAGAACAGCGTGGCGGCAGAATTACAAAAC +
Preference number: 1 (lower is better)
Translates to: PGPAGSGTPTGAQAS*GRSAQNSVAAELQN
Trigger: GTTTTGTAATTCTGCCGCCACGCTGTTCTGTGCGGACCGACCTCAAGAGGCTTGGGCCCCCGTGGGTGTCCCACTGCCTGCCGGCCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp GCGCGTGCAGGAAGCTTGCGGTGGATCTGCGTGCTGCAGCTCCCATaGCTGAGTCGAGGGGCGAGCGGCTGTGCAGTGTCCCCTCGAAAC +
Preference number: 1 (lower is better)
Translates to: ARAGSLRWICVLQLP*LSRGASGCAVSPRN
Trigger: GTTTCGAGGGGACACTGCACAGCCGCTCGCCCCTCGACTCAGTCATGGGAGCTGCAGCACGCAGATCCACCGCAAGCTTCCTGCACGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp ACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTATaGCGTCCCGTGCAGAGAACCCTCCCATGCCATTCGTGCCGGCCG +
Preference number: 1 (lower is better)
Translates to: TPAQAPASLKDGMPL*RPVQRTLPCHSCRP
Trigger: CGGCCGGCACGAATGGCATGGGAGGGTTCTCTGCACGGGACGGCATAACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTaGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAA +
Preference number: 1 (lower is better)
Translates to: PADASAWPPALSRGT*VSHARGTRASPGNQ
Trigger: TTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR TCA 90 bp GTGCAGGAAGCTTGCGGTGGATCTGCGTGCTGCAGCTCCCATGACTaGGTCGAGGGGCGAGCGGCTGTGCAGTGTCCCCTCGAAACACCC +
Preference number: 1 (lower is better)
Translates to: VQEACGGSACCSSHD*VEGRAAVQCPLETP
Trigger: GGGTGTTTCGAGGGGACACTGCACAGCCGCTCGCCCCTCGACTCAGTCATGGGAGCTGCAGCACGCAGATCCACCGCAAGCTTCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GCGAGCGGCGCGGAGGGCACATCCGTCCCTCCCATGGGTACACGCTaGACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCA +
Preference number: 1 (lower is better)
Translates to: ASGAEGTSVPPMGTR*TVSTGEAGCCHIKS
Trigger: TGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTACCCATGGGAGGGACGGATGTGCCCTCCGCGCCGCTCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GCGAAGATGGTGGGAGGGCCCAGCGCAGCATTCCGGAGATGCGCGTaGAGGAAGCTTGCGGTGGATCTGCGTGCTGCAGCTCCCATGACT +
Preference number: 1 (lower is better)
Translates to: AKMVGGPSAAFRRCA*RKLAVDLRAAAPMT
Trigger: AGTCATGGGAGCTGCAGCACGCAGATCCACCGCAAGCTTCCTGCACGCGCATCTCCGGAATGCTGCGCTGGGCCCTCCCACCATCTTCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp ACAAACGCGAAGATGGTGGGAGGGCCCAGCGCAGCATTCCGGAGATaGGCGTGCAGGAAGCTTGCGGTGGATCTGCGTGCTGCAGCTCCC +
Preference number: 1 (lower is better)
Translates to: TNAKMVGGPSAAFRR*ACRKLAVDLRAAAP
Trigger: GGGAGCTGCAGCACGCAGATCCACCGCAAGCTTCCTGCACGCGCATCTCCGGAATGCTGCGCTGGGCCCTCCCACCATCTTCGCGTTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp CGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTaGGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTT +
Preference number: 1 (lower is better)
Translates to: RTPLHGHRPSVEELG*ATPGAHEHRLEINF
Trigger: AAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR GCA 90 bp CCAAATGCAAACCCCAGAAGAACGGCCCATGCCCTCTGCTGGCCCTaGTATCCTTGGGCCTCCCAGGGCCAGGCAAGCTCCTTCGCTGTG +
Preference number: 1 (lower is better)
Translates to: PNANPRRTAHALCWP*YPWASQGQASSFAV
Trigger: CACAGCGAAGGAGCTTGCCTGGCCCTGGGAGGCCCAAGGATAGCAGGGCCAGCAGAGGGCATGGGCCGTTCTTCTGGGGTTTGCATTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GAAGGGTGGCAAGGCCCCAGGCACCCACATGATCAGACGATCAGATaGCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: EGWQGPRHPHDQTIR*RGRATSGFHVNRAG
Trigger: CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGTCTGATCATGTGGGTGCCTGGGGCCTTGCCACCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GCCGCTGCTGAATGCAGGCCTCTGCCTCCACAAAGCCACGAGCTCTaGCTCGCCCCTTTCTGTCCATGGCCATTAGCACCTCCACCAGGT +
Preference number: 1 (lower is better)
Translates to: AAAECRPLPPQSHEL*LAPFCPWPLAPPPG
Trigger: ACCTGGTGGAGGTGCTAATGGCCATGGACAGAAAGGGGCGAGCCAGAGCTCGTGGCTTTGTGGAGGCAGAGGCCTGCATTCAGCAGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp AGCAGGCGGAGCAGATGCCTCCCGTCTGGACTGTCCCAGGCTGGGTaGAACTCAAAGACCATGCTTTGGAGAGCCACGGTAAGCGACGAG +
Preference number: 1 (lower is better)
Translates to: SRRSRCLPSGLSQAG*NSKTMLWRATVSDE
Trigger: CTCGTCGCTTACCGTGGCTCTCCAAAGCATGGTCTTTGAGTTCCACCCAGCCTGGGACAGTCCAGACGGGAGGCATCTGCTCCGCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp GGCTGTTTCAAGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTaGAGGATGGCATGCCGTTATGCCGTCCCGTGCAGAGAACCCTCC +
Preference number: 1 (lower is better)
Translates to: GCFKILPHLRRLLPA*RMACRYAVPCREPS
Trigger: GGAGGGTTCTCTGCACGGGACGGCATAACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCTTGAAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp CCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCAGGGGCTaGGGAGCGGAAAGAAAGCTTCCAAGGCTGGAGGTCCACGCCTGC +
Preference number: 1 (lower is better)
Translates to: PRLQTAWHHSLQVRG*GAERKLPRLEVHAC
Trigger: GCAGGCGTGGACCTCCAGCCTTGGAAGCTTTCTTTCCGCTCCTCAGCCCCTGACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp CAGAGGAAGGCCTTGGCACCACCAGCTTCTTGGGACAGAGGGACCTaGCGTCTCCCACCCAAGACTGCGCACACAACTCCCAGAGTTCAA +
Preference number: 1 (lower is better)
Translates to: QRKALAPPASWDRGT*RLPPKTAHTTPRVQ
Trigger: TTGAACTCTGGGAGTTGTGTGCGCAGTCTTGGGTGGGAGACGGCAGGTCCCTCTGTCCCAAGAAGCTGGTGGTGCCAAGGCCTTCCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GCGTGTCTGTTTGGCTTTGAAGAGGAACTGGGATGGCAGCCACAGTaGTCCCTCTGCAGCCGTTGCCTCTGTGGAGGGAGAGGCCATTCC +
Preference number: 1 (lower is better)
Translates to: ACLFGFEEELGWQPQ*SLCSRCLCGGRGHS
Trigger: GGAATGGCCTCTCCCTCCACAGAGGCAACGGCTGCAGAGGGAGCACTGTGGCTGCCATCCCAGTTCCTCTTCAAAGCCAAACAGACACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp TCAAGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATaGCATGCCGTTATGCCGTCCCGTGCAGAGAACCCTCCCATGCCA +
Preference number: 1 (lower is better)
Translates to: SRFCHTCAGSCQPEG*HAVMPSRAENPPMP
Trigger: TGGCATGGGAGGGTTCTCTGCACGGGACGGCATAACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp GGGTATGGGAGAAACCACACGACTGGAACCAAGTGTTTTCCGCAATaGGACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCAC +
Preference number: 1 (lower is better)
Translates to: GYGRNHTTGTKCFPQ*DRVRPPRLQTAWHH
Trigger: GTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTCTCATTGCGGAAAACACTTGGTTCCAGTCGTGTGGTTTCTCCCATACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp TTCCTAACTTACAGGCACACAGGGCCGCTGCTGAATGCAGGCCTCTaGCTCCACAAAGCCACGAGCTCTGGCTCGCCCCTTTCTGTCCAT +
Preference number: 1 (lower is better)
Translates to: FLTYRHTGPLLNAGL*LHKATSSGSPLSVH
Trigger: ATGGACAGAAAGGGGCGAGCCAGAGCTCGTGGCTTTGTGGAGGCAGAGGCCTGCATTCAGCAGCGGCCCTGTGTGCCTGTAAGTTAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTaGAACCAAGTGTTTTCCGCAATGAGACCGAGTGCGTCCCCCGCG +
Preference number: 1 (lower is better)
Translates to: LAEVDLVRVWEKPHD*NQVFSAMRPSASPA
Trigger: CGCGGGGGACGCACTCGGTCTCATTGCGGAAAACACTTGGTTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp ACAGAGTCTGAGACTGGGTCTTCCAGAACGCGATCAGGCTGGCACTaGTGGAGACAGAGGAAGGCCTTGGCACCACCAGCTTCTTGGGAC +
Preference number: 1 (lower is better)
Translates to: TESETGSSRTRSGWH*WRQRKALAPPASWD
Trigger: GTCCCAAGAAGCTGGTGGTGCCAAGGCCTTCCTCTGTCTCCATCAGTGCCAGCCTGATCGCGTTCTGGAAGACCCAGTCTCAGACTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GCCTCCCAGGACCGACTTCCTGCAAGTCTGCATCAGACGGTCCACTaGGCCACTAGTGGGAACTTCTACTTCAAAACACCAGCTGTGGGC +
Preference number: 1 (lower is better)
Translates to: ASQDRLPASLHQTVH*ATSGNFYFKTPAVG
Trigger: GCCCACAGCTGGTGTTTTGAAGTAGAAGTTCCCACTAGTGGCGCAGTGGACCGTCTGATGCAGACTTGCAGGAAGTCGGTCCTGGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp AGGGAGGGGTGTTCAGAGCCTCCCAGGACCGACTTCCTGCAAGTCTaGATCAGACGGTCCACTGCGCCACTAGTGGGAACTTCTACTTCA +
Preference number: 1 (lower is better)
Translates to: REGCSEPPRTDFLQV*IRRSTAPLVGTSTS
Trigger: TGAAGTAGAAGTTCCCACTAGTGGCGCAGTGGACCGTCTGATGCAGACTTGCAGGAAGTCGGTCCTGGGAGGCTCTGAACACCCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GAGCGGAAAGAAAGCTTCCAAGGCTGGAGGTCCACGCCTGCCTTGTaGAATGGCACAGGCTTAGTTCCCCAGAGAAACGCAGCCCCAACA +
Preference number: 1 (lower is better)
Translates to: ERKESFQGWRSTPAL*NGTGLVPQRNAAPT
Trigger: TGTTGGGGCTGCGTTTCTCTGGGGAACTAAGCCTGTGCCATTCCACAAGGCAGGCGTGGACCTCCAGCCTTGGAAGCTTTCTTTCCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp GTAGAACCGCCGGGGCCAAACTCAATGTCTGATGAGCAGCCAACATaGGAACGGGGCCACCTCCAAACACCCAGACACCTCCAACTGTCA +
Preference number: 1 (lower is better)
Translates to: VEPPGPNSMSDEQPT*ERGHLQTPRHLQLS
Trigger: TGACAGTTGGAGGTGTCTGGGTGTTTGGAGGTGGCCCCGTTCTCATGTTGGCTGCTCATCAGACATTGAGTTTGGCCCCGGCGGTTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp ATGGAGAAATTGGGGCGAGCGCTAACCTCAAGATCGGGCAACATATaGAACCCAAAGAAAGAAGCGAAGGAGGCCCCGGGCCCACAGCAC +
Preference number: 1 (lower is better)
Translates to: MEKLGRALTSRSGNI*NPKKEAKEAPGPQH
Trigger: GTGCTGTGGGCCCGGGGCCTCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCTCGCCCCAATTTCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CCACGGGGGCCCAAGCCTCTTGAGGTCGGTCCGCACAGAACAGCGTaGCGGCAGAATTACAAAACATTCTCAGAGAGACTGCAAAGGACA +
Preference number: 1 (lower is better)
Translates to: PRGPKPLEVGPHRTA*RQNYKTFSERLQRT
Trigger: TGTCCTTTGCAGTCTCTCTGAGAATGTTTTGTAATTCTGCCGCCACGCTGTTCTGTGCGGACCGACCTCAAGAGGCTTGGGCCCCCGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GTTTACAAGTCAGGGGCTGAGGAGCGGAAAGAAAGCTTCCAAGGCTaGAGGTCCACGCCTGCCTTGTGGAATGGCACAGGCTTAGTTCCC +
Preference number: 1 (lower is better)
Translates to: VYKSGAEERKESFQG*RSTPALWNGTGLVP
Trigger: GGGAACTAAGCCTGTGCCATTCCACAAGGCAGGCGTGGACCTCCAGCCTTGGAAGCTTTCTTTCCGCTCCTCAGCCCCTGACTTGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GGAAAATCTGAGCTTAGGACACACAAAACAACAGGACGGTGGCTTTaGGTCACCGAAGGGCTCACACACGAGGGCAGCTTTCCACCGCTC +
Preference number: 1 (lower is better)
Translates to: GKSELRTHKTTGRWL*VTEGLTHEGSFPPL
Trigger: GAGCGGTGGAAAGCTGCCCTCGTGTGTGAGCCCTTCGGTGACGCAAAGCCACCGTCCTGTTGTTTTGTGTGTCCTAAGCTCAGATTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp CCCTACACGAGCACCCCGATCTATGAAGTCGCTTGCACTGTGCCCTaGTGGTTGGTGCTGTGGGGTGTTCTTGGGATCAACTCACTCATT +
Preference number: 1 (lower is better)
Translates to: PYTSTPIYEVACTVP*WLVLWGVLGINSLI
Trigger: AATGAGTGAGTTGATCCCAAGAACACCCCACAGCACCAACCAGCAGGGCACAGTGCAAGCGACTTCATAGATCGGGGTGCTCGTGTAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GAAACCACACGACTGGAACCAAGTGTTTTCCGCAATGAGACCGAGTaGGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAG +
Preference number: 1 (lower is better)
Translates to: ETTRLEPSVFRNETE*VPRGSRLHGITVYK
Trigger: CTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTCTCATTGCGGAAAACACTTGGTTCCAGTCGTGTGGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp TCAGTTCTCTCACTTCTGAGTAAATTCTCACAAACGCGAAGATGGTaGGAGGGCCCAGCGCAGCATTCCGGAGATGCGCGTGCAGGAAGC +
Preference number: 1 (lower is better)
Translates to: SVLSLLSKFSQTRRW*EGPAQHSGDARAGS
Trigger: GCTTCCTGCACGCGCATCTCCGGAATGCTGCGCTGGGCCCTCCCACCATCTTCGCGTTTGTGAGAATTTACTCAGAAGTGAGAGAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTaGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACAAT +
Preference number: 1 (lower is better)
Translates to: VSCSMLAVTEGLAIC*SECSWSRESHSVHN
Trigger: ATTGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR CCA 90 bp TCTTCAGTTCTCTCACTTCTGAGTAAATTCTCACAAACGCGAAGATaGTGGGAGGGCCCAGCGCAGCATTCCGGAGATGCGCGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: SSVLSLLSKFSQTRR*WEGPAQHSGDARAG
Trigger: TCCTGCACGCGCATCTCCGGAATGCTGCGCTGGGCCCTCCCACCATCTTCGCGTTTGTGAGAATTTACTCAGAAGTGAGAGAACTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GAAAGAAAGCTTCCAAGGCTGGAGGTCCACGCCTGCCTTGTGGAATaGCACAGGCTTAGTTCCCCAGAGAAACGCAGCCCCAACATGATT +
Preference number: 1 (lower is better)
Translates to: ERKLPRLEVHACLVE*HRLSSPEKRSPNMI
Trigger: AATCATGTTGGGGCTGCGTTTCTCTGGGGAACTAAGCCTGTGCCATTCCACAAGGCAGGCGTGGACCTCCAGCCTTGGAAGCTTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp AGCAGTTTAGGTCAGCCTCAAACAAACAGCGTGGAGGTCACTGCCTaGTTCCAACAGTTCCCTCTTGGGCAAGCTGTACAATGGTCACGC +
Preference number: 1 (lower is better)
Translates to: SSLGQPQTNSVEVTA*FQQFPLGQAVQWSR
Trigger: GCGTGACCATTGTACAGCTTGCCCAAGAGGGAACTGTTGGAAGCAGGCAGTGACCTCCACGCTGTTTGTTTGAGGCTGACCTAAACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp CCAGGCTTTGCTGATGGTCATGGTCAATGCATAAGAGATGGGTCTTaGACCAATCTCCTGCAATCCTGGCAGAGGTGGACTTGGTCAGGG +
Preference number: 1 (lower is better)
Translates to: PGFADGHGQCIRDGS*TNLLQSWQRWTWSG
Trigger: CCCTGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAGACCCATCTCTTATGCATTGACCATGACCATCAGCAAAGCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GTGTCACTCTTAGTGCAACAGTTTCTAGATTGGCAAACCCAAGTCTaGGGCCCCAAATGCAAACCCCAGAAGAACGGCCCATGCCCTCTG +
Preference number: 1 (lower is better)
Translates to: VSLLVQQFLDWQTQV*GPKCKPQKNGPCPL
Trigger: CAGAGGGCATGGGCCGTTCTTCTGGGGTTTGCATTTGGGGCCCCAGACTTGGGTTTGCCAATCTAGAAACTGTTGCACTAAGAGTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GTCACCGAAGGGCTCACACACGAGGGCAGCTTTCCACCGCTCCCCTaGTGTTCGTTAATTGCGTCGTCATTACAGCAAGAACTTGTCAAA +
Preference number: 1 (lower is better)
Translates to: VTEGLTHEGSFPPLP*CSLIASSLQQELVK
Trigger: TTTGACAAGTTCTTGCTGTAATGACGACGCAATTAACGAACACCAGGGGAGCGGTGGAAAGCTGCCCTCGTGTGTGAGCCCTTCGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp ATCAGACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTaGACAGGGCTGGGACTTACCCTACTGTACTTTGAGGTTTTTACA +
Preference number: 1 (lower is better)
Translates to: IRRSDAGEGPPLAFT*TGLGLTLLYFEVFT
Trigger: TGTAAAAACCTCAAAGTACAGTAGGGTAAGTCCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGTCTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp AGTTCCCCAGAGAAACGCAGCCCCAACATGATTCTGAAAGGACACTaGGGACCGGACTTTAAAGGCACAGAGTCTGAGACTGGGTCTTCC +
Preference number: 1 (lower is better)
Translates to: SSPEKRSPNMILKGH*GPDFKGTESETGSS
Trigger: GGAAGACCCAGTCTCAGACTCTGTGCCTTTAAAGTCCGGTCCTCAGTGTCCTTTCAGAATCATGTTGGGGCTGCGTTTCTCTGGGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp AAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTaGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACT +
Preference number: 1 (lower is better)
Translates to: KSMTSHVRCWLSRKG*PSVGLSVAGLVNPT
Trigger: AGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR CCA 90 bp CAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTaGGACTTACCCTACTGTACTTTGAGGTTTTTACACTGTCTCAAA +
Preference number: 1 (lower is better)
Translates to: QMPGKGHLWLSREQG*DLPYCTLRFLHCLK
Trigger: TTTGAGACAGTGTAAAAACCTCAAAGTACAGTAGGGTAAGTCCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp AAACCAGGAAAATCTGAGCTTAGGACACACAAAACAACAGGACGGTaGCTTTGCGTCACCGAAGGGCTCACACACGAGGGCAGCTTTCCA +
Preference number: 1 (lower is better)
Translates to: KPGKSELRTHKTTGR*LCVTEGLTHEGSFP
Trigger: TGGAAAGCTGCCCTCGTGTGTGAGCCCTTCGGTGACGCAAAGCCACCGTCCTGTTGTTTTGTGTGTCCTAAGCTCAGATTTTCCTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CAAAGGCCTCCTGGGGACACTCCGGTGTCCCGGCTGCCTGACGTGTaGCCGGTCTATCCTAGCGTATTGTATCAAATATATAATTTGACT +
Preference number: 1 (lower is better)
Translates to: QRPPGDTPVSRLPDV*PVYPSVLYQIYNLT
Trigger: AGTCAAATTATATATTTGATACAATACGCTAGGATAGACCGGCCACACGTCAGGCAGCCGGGACACCGGAGTGTCCCCAGGAGGCCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GAGCGTGAGAGATGGGTCAGAGAGAGGTCACAGGAAAATGTCGTATaGCTTGTCTGGGCCACTGGGATTGTCCACTGTCTGGATTATGTC +
Preference number: 1 (lower is better)
Translates to: ERERWVRERSQENVV*LVWATGIVHCLDYV
Trigger: GACATAATCCAGACAGTGGACAATCCCAGTGGCCCAGACAAGCCATACGACATTTTCCTGTGACCTCTCTCTGACCCATCTCTCACGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CACCAATCTCCTGCAATCCTGGCAGAGGTGGACTTGGTCAGGGTATaGGAGAAACCACACGACTGGAACCAAGTGTTTTCCGCAATGAGA +
Preference number: 1 (lower is better)
Translates to: HQSPAILAEVDLVRV*EKPHDWNQVFSAMR
Trigger: TCTCATTGCGGAAAACACTTGGTTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GATGGGTCTTGCACCAATCTCCTGCAATCCTGGCAGAGGTGGACTTaGTCAGGGTATGGGAGAAACCACACGACTGGAACCAAGTGTTTT +
Preference number: 1 (lower is better)
Translates to: DGSCTNLLQSWQRWT*SGYGRNHTTGTKCF
Trigger: AAAACACTTGGTTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAGACCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp ATAAGAGATGGGTCTTGCACCAATCTCCTGCAATCCTGGCAGAGGTaGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAACCAAG +
Preference number: 1 (lower is better)
Translates to: IRDGSCTNLLQSWQR*TWSGYGRNHTTGTK
Trigger: CTTGGTTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAGACCCATCTCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GGTCAATGCATAAGAGATGGGTCTTGCACCAATCTCCTGCAATCCTaGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACT +
Preference number: 1 (lower is better)
Translates to: GQCIRDGSCTNLLQS*QRWTWSGYGRNHTT
Trigger: AGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAGACCCATCTCTTATGCATTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp GGGAGGCTCGCCTCCTTCCTGACGCCTCTACACGGAACATGGATTTaGGTCTTACTAAAACTGTGTACAGAGACAAAAAGCCCACTCAGC +
Preference number: 1 (lower is better)
Translates to: GRLASFLTPLHGTWI*VLLKLCTETKSPLS
Trigger: GCTGAGTGGGCTTTTTGTCTCTGTACACAGTTTTAGTAAGACTCAAATCCATGTTCCGTGTAGAGGCGTCAGGAAGGAGGCGAGCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp AGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTTaGGTCACGCGTGTCTGTTTGGCTTTGAAGAGGAACTGGGATGGC +
Preference number: 1 (lower is better)
Translates to: RPGISMQRHPPYCRI*VTRVCLALKRNWDG
Trigger: GCCATCCCAGTTCCTCTTCAAAGCCAAACAGACACGCGTGACTCAAATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CATTCAGTTTGCTTAAAGCAAGGCACACCTTACTTAACAGTGGGATaGGGACAAAGCCAGCGAGTGGGCACCCCTCAAATCTTGACAGGC +
Preference number: 1 (lower is better)
Translates to: HSVCLKQGTPYLTVG*GQSQRVGTPQILTG
Trigger: GCCTGTCAAGATTTGAGGGGTGCCCACTCGCTGGCTTTGTCCCCATCCCACTGTTAAGTAAGGTGTGCCTTGCTTTAAGCAAACTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp AGTCGCTTGCACTGTGCCCTGCTGGTTGGTGCTGTGGGGTGTTCTTaGGATCAACTCACTCATTTTAAGGACCTTGGAGCTACAGAAAGA +
Preference number: 1 (lower is better)
Translates to: SRLHCALLVGAVGCS*DQLTHFKDLGATER
Trigger: TCTTTCTGTAGCTCCAAGGTCCTTAAAATGAGTGAGTTGATCCCAAGAACACCCCACAGCACCAACCAGCAGGGCACAGTGCAAGCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp TCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTaGATAGATCTATGGAAGTCATCTGACAAAAGAGCACACGGAGAG +
Preference number: 1 (lower is better)
Translates to: SRPAEPPPTAFYESQ*IDLWKSSDKRAHGE
Trigger: CTCTCCGTGTGCTCTTTTGTCAGATGACTTCCATAGATCTATGCACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GAGAAATGTGAAGACGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTaGCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAAT +
Preference number: 1 (lower is better)
Translates to: EKCEDGLSGETRGSG*LISATHLGSCYFLN
Trigger: ATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCGTCTTCACATTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CAGAGAGAGGTCACAGGAAAATGTCGTATGGCTTGTCTGGGCCACTaGGATTGTCCACTGTCTGGATTATGTCGACTTCTAAAGCTCCTC +
Preference number: 1 (lower is better)
Translates to: QREVTGKCRMACLGH*DCPLSGLCRLLKLL
Trigger: GAGGAGCTTTAGAAGTCGACATAATCCAGACAGTGGACAATCCCAGTGGCCCAGACAAGCCATACGACATTTTCCTGTGACCTCTCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp TCCACTGCGCCACTAGTGGGAACTTCTACTTCAAAACACCAGCTGTaGGCCCTGTGTTCTTTTCAAACAAAGGGCCCTGGATTTGAACAG +
Preference number: 1 (lower is better)
Translates to: STAPLVGTSTSKHQL*ALCSFQTKGPGFEQ
Trigger: CTGTTCAAATCCAGGGCCCTTTGTTTGAAAAGAACACAGGGCCCACAGCTGGTGTTTTGAAGTAGAAGTTCCCACTAGTGGCGCAGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp GAGTGCAACTCCTCGGTCACTTTGGGGAAGGGCTTCAAACATAAATaGAATACTCACGTTCTGCAAGTGAGGCGCATGAGCACTGAGGAA +
Preference number: 1 (lower is better)
Translates to: ECNSSVTLGKGFKHK*NTHVLQVRRMSTEE
Trigger: TTCCTCAGTGCTCATGCGCCTCACTTGCAGAACGTGAGTATTTCATTTATGTTTGAAGCCCTTCCCCAAAGTGACCGAGGAGTTGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp TTTATTAAAATGGCACTTGTCTGCCAACCTCTCTGGACCTGGAAATaGTGTAAACACACGGGGCCCACCTTCTGCCACTGCTCCTTAGTT +
Preference number: 1 (lower is better)
Translates to: FIKMALVCQPLWTWK*CKHTGPTFCHCSLV
Trigger: AACTAAGGAGCAGTGGCAGAAGGTGGGCCCCGTGTGTTTACAGCATTTCCAGGTCCAGAGAGGTTGGCAGACAAGTGCCATTTTAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp AAACGTGTTAACAAAAGCACCAGGAATCTTCAGTTCTCTCACTTCTaGGTAAATTCTCACAAACGCGAAGATGGTGGGAGGGCCCAGCGC +
Preference number: 1 (lower is better)
Translates to: KRVNKSTRNLQFSHF*VNSHKREDGGRAQR
Trigger: GCGCTGGGCCCTCCCACCATCTTCGCGTTTGTGAGAATTTACTCAGAAGTGAGAGAACTGAAGATTCCTGGTGCTTTTGTTAACACGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GTCACTGCCTGCTTCCAACAGTTCCCTCTTGGGCAAGCTGTACAATaGTCACGCATCGTTTGTGGTTCTAGAGTGCAAACATTCATTCAA +
Preference number: 1 (lower is better)
Translates to: VTACFQQFPLGQAVQ*SRIVCGSRVQTFIQ
Trigger: TTGAATGAATGTTTGCACTCTAGAACCACAAACGATGCGTGACCATTGTACAGCTTGCCCAAGAGGGAACTGTTGGAAGCAGGCAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp ACTCACACACAGGGACACACGCATGCACACACACACACACCACTCTaGGTACACATCTTCACAAATAATAGTCATCCCTTTGTCATTGCC +
Preference number: 1 (lower is better)
Translates to: THTQGHTHAHTHTPL*VHIFTNNSHPFVIA
Trigger: GGCAATGACAAAGGGATGACTATTATTTGTGAAGATGTGTACTCAGAGTGGTGTGTGTGTGTGTGCATGCGTGTGTCCCTGTGTGTGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp ACACAATGCGTCCTGGGGAGCCAATTGCCCGGCACGTCTTATTACTaGGAAAGTGCAAGAATGCTGATCATCTTATGCAGCATACTAAAG +
Preference number: 1 (lower is better)
Translates to: TQCVLGSQLPGTSYY*ESARMLIILCSILK
Trigger: CTTTAGTATGCTGCATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAATTGGCTCCCCAGGACGCATTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp AAACATTCTCAGAGAGACTGCAAAGGACACTTAGCTCTTCCGGAATaGAAGCACGCAACGCAGCATAAAAAGCATCGAAACCCCAAACAG +
Preference number: 1 (lower is better)
Translates to: KHSQRDCKGHLALPE*KHATQHKKHRNPKQ
Trigger: CTGTTTGGGGTTTCGATGCTTTTTATGCTGCGTTGCGTGCTTTCATTCCGGAAGAGCTAAGTGTCCTTTGCAGTCTCTCTGAGAATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp GGAATCAAACAGACCACAACAGTGTTCACAAGACTGCAACGAGTCTaGTTAGGACTAAATCATCAGGCACCAAGAGACCATGTTCTCCTA +
Preference number: 1 (lower is better)
Translates to: GIKQTTTVFTRLQRV*LGLNHQAPRDHVLL
Trigger: TAGGAGAACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTTGTGAACACTGTTGTGGTCTGTTTGATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp ATATTCTTCTCGAGTGACTATGAGAACAAGACCACCAGGCTTTGCTaGTGGTCATGGTCAATGCATAAGAGATGGGTCTTGCACCAATCT +
Preference number: 1 (lower is better)
Translates to: IFFSSDYENKTTRLC*WSWSMHKRWVLHQS
Trigger: AGATTGGTGCAAGACCCATCTCTTATGCATTGACCATGACCATCAGCAAAGCCTGGTGGTCTTGTTCTCATAGTCACTCGAGAAGAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp TCACAAAACAGCACTGCATGGTTTCTATATTGCAAGCACAAGACATaGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACA +
Preference number: 1 (lower is better)
Translates to: SQNSTAWFLYCKHKT*SHGSTVQVETSPQT
Trigger: TGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGTCTTGTGCTTGCAATATAGAAACCATGCAGTGCTGTTTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp CTGTTTCTATTTATTGTACATTCCTTTTCTCATGAGCGTGAGAGATaGGTCAGAGAGAGGTCACAGGAAAATGTCGTATGGCTTGTCTGG +
Preference number: 1 (lower is better)
Translates to: LFLFIVHSFSHERER*VRERSQENVVWLVW
Trigger: CCAGACAAGCCATACGACATTTTCCTGTGACCTCTCTCTGACCCATCTCTCACGCTCATGAGAAAAGGAATGTACAATAAATAGAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp CTGCCCGTGGGTCACAGTATGGCACACACATTTTCAAGCCAGAACTaGACAGATAGATGTTCACAATTCAGTTTATTCAGGCAACATATT +
Preference number: 1 (lower is better)
Translates to: LPVGHSMAHTFSSQN*TDRCSQFSLFRQHI
Trigger: AATATGTTGCCTGAATAAACTGAATTGTGAACATCTATCTGTTCAGTTCTGGCTTGAAAATGTGTGTGCCATACTGTGACCCACGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp ACAGAAACTGCCAATTCACAAAACAGCACTGCATGGTTTCTATATTaGAAGCACAAGACATGGTCACATGGTTCCACTGTACAGGTAGAA +
Preference number: 1 (lower is better)
Translates to: TETANSQNSTAWFLY*KHKTWSHGSTVQVE
Trigger: TTCTACCTGTACAGTGGAACCATGTGACCATGTCTTGTGCTTGCAATATAGAAACCATGCAGTGCTGTTTTGTGAATTGGCAGTTTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp ATGACATTGGGTTCTCATACAGGTCTGCAGTTCAAAATCCAAGTTTaGAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATA +
Preference number: 1 (lower is better)
Translates to: MTLGSHTGLQFKIQV*NLGRKAFWKTENLI
Trigger: TATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAACTGCAGACCTGTATGAGAACCCAATGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR TCA 90 bp CTCCTAGTAACCGATCTAGAACTTCCCTTCAGAAGAAAAAGAAAATaGGGCGAACTTGTCCTTCATAAATGGTCAACAGACACGAAGCTA +
Preference number: 1 (lower is better)
Translates to: LLVTDLELPFRRKRK*GELVLHKWSTDTKL
Trigger: TAGCTTCGTGTCTGTTGACCATTTATGAAGGACAAGTTCGCCTCATTTTCTTTTTCTTCTGAAGGGAAGTTCTAGATCGGTTACTAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp TGTGTTCTTTTCAAACAAAGGGCCCTGGATTTGAACAGAATGCTTTaGTTTCAACCCTTAGTTTGTTTTGCAGTAGGGAGTGAGAGTAAC +
Preference number: 1 (lower is better)
Translates to: CVLFKQRALDLNRML*FQPLVCFAVGSESN
Trigger: GTTACTCTCACTCCCTACTGCAAAACAAACTAAGGGTTGAAAGCAAAGCATTCTGTTCAAATCCAGGGCCCTTTGTTTGAAAAGAACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GTTGGGGAAATAATTTCTATCATATCCATTAGGTACCACATGCACTaGAATATCTGTGTCGGCCAAACCAAACCAGAGCAGAAAGGAAAA +
Preference number: 1 (lower is better)
Translates to: VGEIISIISIRYHMH*NICVGQTKPEQKGK
Trigger: TTTTCCTTTCTGCTCTGGTTTGGTTTGGCCGACACAGATATTCCAGTGCATGTGGTACCTAATGGATATGATAGAAATTATTTCCCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp GTCTGTCATCTCATCTTTGACCATGATTCCAAATTCACGGACGTATaGATCTGTGTTGAAACTTGCACTTCGCATCAATTTGCTAATCTC +
Preference number: 1 (lower is better)
Translates to: VCHLIFDHDSKFTDV*ICVETCTSHQFANL
Trigger: GAGATTAGCAAATTGATGCGAAGTGCAAGTTTCAACACAGATCCATACGTCCGTGAATTTGGAATCATGGTCAAAGATGAGATGACAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR CCA 90 bp ATAAGAGTTTATACAGAAACTGCCAATTCACAAAACAGCACTGCATaGTTTCTATATTGCAAGCACAAGACATGGTCACATGGTTCCACT +
Preference number: 1 (lower is better)
Translates to: IRVYTETANSQNSTA*FLYCKHKTWSHGST
Trigger: AGTGGAACCATGTGACCATGTCTTGTGCTTGCAATATAGAAACCATGCAGTGCTGTTTTGTGAATTGGCAGTTTCTGTATAAACTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 90 bp TTATTGTCTGCTTATAAACACAGTGTCTGCCTCCTCAGGTGTATTTaGCTAAAGTATTATTCTAATATAGGGCAACCTTCGAGCCAGATA +
Preference number: 1 (lower is better)
Translates to: LLSAYKHSVCLLRCI*LKYYSNIGQPSSQI
Trigger: TATCTGGCTCGAAGGTTGCCCTATATTAGAATAATACTTTAGCCAAATACACCTGAGGAGGCAGACACTGTGTTTATAAGCAGACAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp AAACAAACTAGAAAGGACCCAGCTAAGCTTAAACACGACAATAGATaGTCAGTTTCTCAGCATTTAGCTTTCTTCACCAGTTTTATCTTG +
Preference number: 1 (lower is better)
Translates to: KQTRKDPAKLKHDNR*SVSQHLAFFTSFIL
Trigger: CAAGATAAAACTGGTGAAGAAAGCTAAATGCTGAGAAACTGAGCATCTATTGTCGTGTTTAAGCTTAGCTGGGTCCTTTCTAGTTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 90 bp ATAAATAAGAGTTTATACAGAAACTGCCAATTCACAAAACAGCACTaGATGGTTTCTATATTGCAAGCACAAGACATGGTCACATGGTTC +
Preference number: 1 (lower is better)
Translates to: INKSLYRNCQFTKQH*MVSILQAQDMVTWF
Trigger: GAACCATGTGACCATGTCTTGTGCTTGCAATATAGAAACCATGCAGTGCTGTTTTGTGAATTGGCAGTTTCTGTATAAACTCTTATTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 90 bp CTGCCTAATATTTTTGCATACTCTGAAACTCACAAATTTAACATCTaGTTAAGGCTTAATTTAAAGTGGCATTGCCACCTAGCATCATGC +
Preference number: 1 (lower is better)
Translates to: LPNIFAYSETHKFNI*LRLNLKWHCHLASC
Trigger: GCATGATGCTAGGTGGCAATGCCACTTTAAATTAAGCCTTAATCAGATGTTAAATTTGTGAGTTTCAGAGTATGCAAAAATATTAGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGGAACACCGGCGGCCTaGCCTGGGGCAGCAGGATGT +
Preference number: 2 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPGTPAA*PGAAGC
Trigger: ACATCCTGCTGCCCCAGGGCAGGCCGCCGGTGTTCC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCCTTCGGACGCGGTaGAGAAGGAGCGGCCCACGG +
Preference number: 2 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTSLRTR*RRSGPR
Trigger: CCGTGGGCCGCTCCTTCTTCACCGCGTCCGAAGGCT...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR CAA 90 bp ACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTaGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCA +
Preference number: 2 (lower is better)
Translates to: TCGRLCMATGPQSRN*GEPRQGHTSIAWKS
Trigger: TGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR CAA 90 bp AAACCCCAGAAGAACGGCCCATGCCCTCTGCTGGCCCTGCTATCCTaGGGCCTCCCAGGGCCAGGCAAGCTCCTTCGCTGTGACCGACGG +
Preference number: 2 (lower is better)
Translates to: KPQKNGPCPLLALLS*GLPGPGKLLRCDRR
Trigger: CCGTCGGTCACAGCGAAGGAGCTTGCCTGGCCCTGGGAGGCCCAAGGATAGCAGGGCCAGCAGAGGGCATGGGCCGTTCTTCTGGGGTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp CCCTGGGCCGGCAGGCAGTGGGACACCCACGGGGGCCCAAGCCTCTaGAGGTCGGTCCGCACAGAACAGCGTGGCGGCAGAATTACAAAA +
Preference number: 2 (lower is better)
Translates to: PWAGRQWDTHGGPSL*RSVRTEQRGGRITK
Trigger: TTTTGTAATTCTGCCGCCACGCTGTTCTGTGCGGACCGACCTCAAGAGGCTTGGGCCCCCGTGGGTGTCCCACTGCCTGCCGGCCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp ACCGCCTTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGGGTGGGCGTCCATGCTaGCCACCACGGCGGCAATGG +
Preference number: 2 (lower is better)
Translates to: TALASAWWSRPLLCPEVWGGRPC*PPRRQW
Trigger: CCATTGCCGCCGTGGTGGGCAGCATGGACGCCCACC...CCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCTGTCACGGAAGGGCTaGCCATCTGTTGGTCTGAGT +
Preference number: 2 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPLSRKG*PSVGLS
Trigger: ACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAG...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR TCA 90 bp TCCCCTGGATGCCAGCGTGACTACACAGGTAGAAGTCGAACTCGGTGGGGTGGGTGTCTCCCACGCGCTTaGCCTCGGCGTACACGGGCG +
Preference number: 2 (lower is better)
Translates to: SPGCQRDYTGRSRTRWGGCLPRA*PRRTRA
Trigger: CGCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACA...CCCACCCCACCGAGTTCGACTTCTACCTGTGTAGTCACGCTGGCATCCAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp ACCGCCTTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGGCAGAACACGGCACCTaGGGACGCCTCTGCATGGCC +
Preference number: 2 (lower is better)
Translates to: TALASAWWSRPLLCPEVWAEHGT*GRLCMA
Trigger: GGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGC...CCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp GTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGACCTCGGCGTACACGGGCATGCCCGTGTGGAACTaGTTGTTCCGCATGTCCCAG +
Preference number: 2 (lower is better)
Translates to: VAIPSTVSPTRLTSAYTGMPVWN*LFRMSQ
Trigger: CTGGGACATGCGGAACAAGCAGTTCCACACGGGCAT...GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCTCAGTCGAGGAACTTaGGTGAGCCACGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRLSRGT*VSHARG
Trigger: GCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAG...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGACCACGTCCAGGGCCTaGATCGTCTCAAAAGGGACG +
Preference number: 2 (lower is better)
Translates to: PALSRGTWVSHARGTRASTTSRA*IVSKGT
Trigger: CGTCCCTTTTGAGACGATCCAGGCCCTGGACGTGGT...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp TCCCCTGGATGCCAGCGTGACTACACAGGTAGAAGTCGAACTCGGTGGGGTGGGTGCCCCCGTAGAGGATaGAGGGCGGCTGCAGCACCC +
Preference number: 2 (lower is better)
Translates to: SPGCQRDYTGRSRTRWGGCPRRG*RAAAAP
Trigger: GGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCA...CCCACCCCACCGAGTTCGACTTCTACCTGTGTAGTCACGCTGGCATCCAGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGTTAGTTCAGGCCGGGTaGAGGGCGGTGCTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLLVQAG*RAVLAE
Trigger: TTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAA...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACGTCTCATGTTCGATaGTGGCTGTCACGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: QNTAPADASAWPPALSRGTSHVR*WLSRKG
Trigger: GCCCTTCCGTGACAGCCAGCATCGAACATGAGACGT...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR GCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGACGTCTCATGTTCGATaGTGGCTGTCACGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: PALSRGTWVSHARGTRASTSHVR*WLSRKG
Trigger: GCCCTTCCGTGACAGCCAGCATCGAACATGAGACGT...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR GCA 90 bp TGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTACCTGCGGACGCCTCTaGATGGCCACCGGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: WPVLGGLARYSAQRYGFLTCGRL*MATGPQ
Trigger: CTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGT...AAGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp GACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCGCAGAACACGGCACCTaGGGACGCCTCTGCATGGCC +
Preference number: 2 (lower is better)
Translates to: DRVRPPRLQTAWHHSLQVAEHGT*GRLCMA
Trigger: GGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGC...GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGCCCACCCCACCACAGTaGCGAGGTAAGTGTCGCGCA +
Preference number: 2 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGPTPPQ*RGKCRA
Trigger: TGCGCGACACTTACCTCGGCACTGTGGTGGGGTGGG...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGAAGCACCTCCTCCCTaGTGGGTGCCACCAGAGCTG +
Preference number: 2 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGEAPPP*WVPPEL
Trigger: CAGCTCTGGTGGCACCCAGCAGGGAGGAGGTGCTTC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp TTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTAGGATGGAGGGCGGCTaGAGCACCCGCCCAGTCACG +
Preference number: 2 (lower is better)
Translates to: LASAWWSRPLLCPEVWLPRMEGG*STRPVT
Trigger: CGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCT...AGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGTCTCATGTTCGATGCTaGCTGTCACGGAAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTSHVRC*LSRKGW
Trigger: CCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGA...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp GTAGAGGATGGAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCCTCAGTCGAGGAACTTaGGTGAGCCACGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: VEDGGRLQHPPSHVCHLILSRGT*VSHARG
Trigger: GCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAG...GATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp TTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTGCTGCACGCGCACGGTaGCGCAGTAGCGATTGGGGT +
Preference number: 2 (lower is better)
Translates to: LASAWWSRPLLCPEVWLPAARAR*RSSDWG
Trigger: ACCCCAATCGCTACTGCGCCACCGTGCGCGTGCAGC...AGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTCTTGCCGGGCAGGATaGCCACCACCAGCTGCAGGC +
Preference number: 2 (lower is better)
Translates to: CSMLAVTEGLAICWSECSSCRAG*PPPAAG
Trigger: GCCTGCAGCTGGTGGTGGTCATCCTGCCCGGCAAGA...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp ACCGCCTTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGACTCGGTGGGGTGGGTaGTTTTCGTGTCCACAGTCG +
Preference number: 2 (lower is better)
Translates to: TALASAWWSRPLLCPEVWTRWGG*FSCPQS
Trigger: CGACTGTGGACACGAAAATCACCCACCCCACCGAGT...CCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACACGTCTCATGTTCGATaGTGGCTGTCACGGAAGGGC +
Preference number: 2 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHTSHVR*WLSRKG
Trigger: GCCCTTCCGTGACAGCCAGCATCGAACATGAGACGT...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR GCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCCCGGGTGAAGGGCGGTaGTGGCAGAACACGGCACCT +
Preference number: 2 (lower is better)
Translates to: CSMLAVTEGLAICWSECSPGEGR*WQNTAP
Trigger: AGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGG...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGAGATCTTTCTGAGCTaGTCTGTGAAGGACTTCAGA +
Preference number: 2 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPEIFLS*SVKDFR
Trigger: TCTGAAGTCCTTCACAGAGCAGCTCAGAAAGATCTC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp ACCGCCTTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGTCTTGTATGATCTCCTaGCGGTGCTGCTGCACGCGC +
Preference number: 2 (lower is better)
Translates to: TALASAWWSRPLLCPEVWSCMIS*RCCCTR
Trigger: GCGCGTGCAGCAGCACCGGCAGGAGATCATACAAGA...CCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGTCTGTCTCAGGCATCTaGTCAGGAAGCACCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGSVSGI*SGSTSS
Trigger: GGAGGAGGTGCTTCCTGAGCAGATGCCTGAGACAGA...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCCCCCCTGCGCGTATTTaGAGAAGCACGGCTGGCCCT +
Preference number: 2 (lower is better)
Translates to: CSMLAVTEGLAICWSECSPPARI*RSTAGP
Trigger: AGGGCCAGCCGTGCTTCTGCAAATACGCGCAGGGGG...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCAGGTGAAGGGCGGTGCTaGCAGAACACGGCACCTGCG +
Preference number: 2 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIAGEGRC*QNTAPA
Trigger: CGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACC...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCTTCATCTGCCCACAGTaGGTTATCTCCACCTTTAGA +
Preference number: 2 (lower is better)
Translates to: PADASAWPPALSRGTWVSFICPQ*VISTFR
Trigger: TCTAAAGGTGGAGATAACGCACTGTGGGCAGATGAA...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGGTCTGAGTGTAGCTaGTCTCGTGAATCCCACTCG +
Preference number: 2 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKWSECS*SRESHS
Trigger: CGAGTGGGATTCACGAGACCAGCTACACTCAGACCA...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCTCCAAGTTTGAAATCTaGGACGGAAGGCATTCTGGA +
Preference number: 2 (lower is better)
Translates to: PADASAWPPALSRGTWVSSKFEI*DGRHSG
Trigger: TCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGA...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAACTCAGTCGAGGAACTTaGGTGAGCCACGCCAGGGGC +
Preference number: 2 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQLSRGT*VSHARG
Trigger: GCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAG...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp TTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTGTTGGACAGGGTCTGTaGCGTGGTCCTCTGCACGTT +
Preference number: 2 (lower is better)
Translates to: LASAWWSRPLLCPEVWLPVGQGL*RGPLHV
Trigger: AACGTGCAGAGGACCACGCCACAGACCCTGTCCAAC...AGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTTCTACGAATCTCAGTaGATAGATCTATGGAAGTCA +
Preference number: 2 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPFYESQ*IDLWKS
Trigger: TGACTTCCATAGATCTATGCACTGAGATTCGTAGAA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp TCCCCTGGATGCCAGCGTGACTACACAGGTAGAAGTCGAACTCGGTGGGGTGGGTTGCTAATCTCTTCTTaGCGATCGGGCGCCGACCTA +
Preference number: 2 (lower is better)
Translates to: SPGCQRDYTGRSRTRWGGLLISS*RSGADL
Trigger: TAGGTCGGCGCCCGATCGGCAAGAAGAGATTAGCAA...CCCACCCCACCGAGTTCGACTTCTACCTGTGTAGTCACGCTGGCATCCAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGCACACGAGCATCGCCTaGAAATCAACTTTAGTGACA +
Preference number: 2 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRHTSIA*KSTLVT
Trigger: TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTG...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACATCTCAAAAGGGACGCTaGGCAGCCGCCCTGAAAGTG +
Preference number: 2 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTSQKGR*AAALKV
Trigger: CACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGA...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCGATTCACAGCTAGTTTaGGCCCATCAATTTCATAGA +
Preference number: 2 (lower is better)
Translates to: PADASAWPPALSRGTWVSDSQLV*AHQFHR
Trigger: TCTATGAAATTGATGGGCTCAAACTAGCTGTGAATC...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR GCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGACTCCGGTGTCCCGGCTaGCTGACGTGTGGCCGGTCT +
Preference number: 2 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRLRCPG*LTCGRS
Trigger: AGACCGGCCACACGTCAGGCAGCCGGGACACCGGAG...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTGGAGAGGCCATTCCTTaGCTTGCAGGATGGTGGGTT +
Preference number: 2 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFGEAIP*LAGWWV
Trigger: AACCCACCATCCTGCAAGGCAAGGAATGGCCTCTCC...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCGGGCTGGCCATCTGTTaGTCTGAGTGTAGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: CSMLAVTEGLAICWSECSGLAIC*SECSWS
Trigger: AGACCAGCTACACTCAGACCAACAGATGGCCAGCCC...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACACTGTCACGGAAGGGCTaGCCATCTGTTGGTCTGAGT +
Preference number: 2 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTLSRKG*PSVGLS
Trigger: ACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAG...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGCAACCTCTCTGGACCTaGAAATGCTGTAAACACACG +
Preference number: 2 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGQPLWT*KCCKHT
Trigger: CGTGTGTTTACAGCATTTCCAGGTCCAGAGAGGTTG...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGGGGTGCCACCAGAGCTaGGTCCTCAGACCCCAGGGA +
Preference number: 2 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMGCHQS*VLRPQG
Trigger: TCCCTGGGGTCTGAGGACCCAGCTCTGGTGGCACCC...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTGCCTTGCAGGATGGTaGGTTGGGGGAGAAAGAGGG +
Preference number: 2 (lower is better)
Translates to: GERGRERERERGVSLNASCLAGW*VGGERG
Trigger: CCCTCTTTCTCCCCCAACCCACCATCCTGCAAGGCA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCAAGATGACGGGCTGCTaGAACACCGGCGGCCTGCCC +
Preference number: 2 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAKMTGC*NTGGLP
Trigger: GGGCAGGCCGCCGGTGTTCCAGCAGCCCGTCATCTT...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGAAACCATATTTCCTATaGCATTGGGTTCTCATACAG +
Preference number: 2 (lower is better)
Translates to: PALSRGTWVSHARGTRASKPYFL*HWVLIQ
Trigger: CTGTATGAGAACCCAATGTCATAGGAAATATGGTTT...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR GCA 90 bp ATCAAACTCAGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTACCTGCGGACGCCTCTaGATGGCCACCGGCCCTCAG +
Preference number: 2 (lower is better)
Translates to: IKLRPGISMQRHPPYCRITCGRL*MATGPQ
Trigger: CTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGT...AATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGACCGGGTGAAGGGCGGTaGTGGCAGAACACGGCACCT +
Preference number: 2 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRPGEGR*WQNTAP
Trigger: AGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGG...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTGTAGTCCTACTTTTCTaGCAGCCCAGTCTGTCTCAG +
Preference number: 2 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVVVLLF*QPSLSQ
Trigger: CTGAGACAGACTGGGCTGGCAGAAAAGTAGGACTAC...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACACTCATGGATGGCAAGTaGCTCATGACCACGTCCAGG +
Preference number: 2 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTLMDGK*LMTTSR
Trigger: CCTGGACGTGGTCATGAGGCACTTGCCATCCATGAG...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR GCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCGACCGCCTTGGCCAGTaGTTGGTGGTCTCGCCCGTT +
Preference number: 2 (lower is better)
Translates to: NKINDVSCSMLAVTEGLADRLGQ*LVVSPV
Trigger: AACGGGCGAGACCACCAAGCACTGGCCAAGGCGGTC...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTGTGTCTGTTTGGCTTTaGAGAGGAACTGGGATGGCA +
Preference number: 2 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFVSVWL*RGTGMA
Trigger: TGCCATCCCAGTTCCTCTTCAAAGCCAAACAGACAC...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGGTTCTCATACAGGTCTaGAGTTCAAAATCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRVLIQV*SSKSKF
Trigger: AAACTTGGATTTTGAACTGCAGACCTGTATGAGAAC...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCAGGGCTGGCCATCTGTTaGTCTGAGTGTAGCTGGTCT +
Preference number: 2 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSGLAIC*SECSWS
Trigger: AGACCAGCTACACTCAGACCAACAGATGGCCAGCCC...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTGGACTGTCCCAGGCTaGGTGGAACTCAAAGACCAT +
Preference number: 2 (lower is better)
Translates to: GERGRERERERGVSLNASWTVPG*VELKDH
Trigger: ATGGTCTTTGAGTTCCACCCAGCCTGGGACAGTCCA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGAGGAGGGGCTGCCCGTaGGTCACAGTATGGCACACA +
Preference number: 2 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMRRGCP*VTVWHT
Trigger: TGTGTGCCATACTGTGACCCACGGGCAGCCCCTCCT...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTCAGCACTGTCATGTTCCTTAATGGCCAGCAACTCGTaGTGGAGAACCTGCTGGAAC +
Preference number: 2 (lower is better)
Translates to: RPLLCPEVWLPSALSCSLMASNS*WRTCWN
Trigger: GTTCCAGCAGGTTCTCCACCACGAGTTGCTGGCCAT...TAAGGAACATGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAGTAACGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp CGCAATAGCTTTATTCCTGCCCCCGTAGAGGATGGAGGGCGGCTGCAGCACCCGGATTCACAGCTAGTTTaGGCCCATCAATTTCATAGA +
Preference number: 2 (lower is better)
Translates to: RNSFIPAPVEDGGRLQHPDSQLV*AHQFHR
Trigger: TCTATGAAATTGATGGGCTCAAACTAGCTGTGAATC...CGGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCAGGAATAAAGCTATTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp AGCGCTAACCTCAAGATCGGGCAACATATGGAACCCAAAGAAAGAAGCGAAGGACATCAGCTGAGTGAGTaGCACACGGGGATGAGGCGG +
Preference number: 2 (lower is better)
Translates to: SANLKIGQHMEPKERSEGHQLSE*HTGMRR
Trigger: CCGCCTCATCCCCGTGTGTCACTCACTCAGCTGATG...TCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGACAGAAGAACGGCCCATaGCCTCTGCTGGCCCTGCTA +
Preference number: 2 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRQKNGP*PLLALL
Trigger: TAGCAGGGCCAGCAGAGGGCATGGGCCGTTCTTCTG...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp AGACATGTACAAAGGTGTGCAGCTGACCCAGCTGGAGATGTTTGGTCTATTAATCGACCTGCGGCTTGCTaGCCCTCCTGCTGCCTCCAA +
Preference number: 2 (lower is better)
Translates to: RHVQRCAADPAGDVWSINRPAAC*PSCCLQ
Trigger: TTGGAGGCAGCAGGAGGGGCAGCAAGCCGCAGGTCG...ATTAATAGACCAAACATCTCCAGCTGGGTCAGCTGCACACCTTTGTACATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATGTGGACAGGGAAGGGTaGCAAGGCCCCAGGCACCCA +
Preference number: 2 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHVDREG*QGPRHP
Trigger: TGGGTGCCTGGGGCCTTGCCACCCTTCCCTGTCCAC...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTTGGGCCGGCAGGCAGTaGGACACCCACGGGGGCCCA +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFWAGRQ*DTHGGP
Trigger: TGGGCCCCCGTGGGTGTCCCACTGCCTGCCGGCCCA...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp AGATGGGTCTTGCACCAATCTCCTGCAATCCTGGCAGAGGTGGACTaGGTCAGGGTATGGGAGAAACCACACGACTGGAACCAAGTGTTT +
Preference number: 2 (lower is better)
Translates to: RWVLHQSPAILAEVD*VRVWEKPHDWNQVF
Trigger: AAACACTTGGTTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAGACCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp GAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCTTaGACCATGATTCCAAATTCACGGACGTATGGATCTGTGTTGAAA +
Preference number: 2 (lower is better)
Translates to: EGGCSTRPVTSVISS*TMIPNSRTYGSVLK
Trigger: TTTCAACACAGATCCATACGTCCGTGAATTTGGAATCATGGTCAAAGATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGGTGCTGCAGCTCCCATaGCTGAGTCGAGGGGCGAGC +
Preference number: 2 (lower is better)
Translates to: IARHVLLLRKCKNADHLMVLQLP*LSRGAS
Trigger: GCTCGCCCCTCGACTCAGTCATGGGAGCTGCAGCAC...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTCCCCGACCTGCGGCTTaGTGCCCCTCCTGCTGCCTC +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFPRPAA*CPSCCL
Trigger: GAGGCAGCAGGAGGGGCAGCAAGCCGCAGGTCGGGG...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCGGGAGACCCCCGACCTaGGGCTTGCTGCCCCTCCTG +
Preference number: 2 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLGRPPT*GLLPLL
Trigger: CAGGAGGGGCAGCAAGCCGCAGGTCGGGGGTCTCCC...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGCATCAGACGGTCCACTaGGCCACTAGTGGGAACTTC +
Preference number: 2 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMHQTVH*ATSGNF
Trigger: GAAGTTCCCACTAGTGGCGCAGTGGACCGTCTGATG...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CGCAATAGCTTTATTCCTGCCCCCGTAGAGGATGGAGGGCGGCTGCAGCACCCGATCTGTGTTGAAACTTaGACTTCGCATCAATTTGCT +
Preference number: 2 (lower is better)
Translates to: RNSFIPAPVEDGGRLQHPICVET*TSHQFA
Trigger: AGCAAATTGATGCGAAGTGCAAGTTTCAACACAGAT...CGGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCAGGAATAAAGCTATTGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTTTTCCACCGCTCCCCTaGTGTTCGTTAATTGCGTCG +
Preference number: 2 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSFPPLP*CSLIAS
Trigger: CGACGCAATTAACGAACACCAGGGGAGCGGTGGAAA...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTTGCAAGCACAAGACATaGTCACATGGTTCCACTGTA +
Preference number: 2 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFCKHKT*SHGSTV
Trigger: TACAGTGGAACCATGTGACCATGTCTTGTGCTTGCA...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp GTAGAGGATGGAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCGTAAACTTTACCCTTTaGGAATCTGTCAGAGGTTTT +
Preference number: 2 (lower is better)
Translates to: VEDGGRLQHPPSHVCHLIVNFTL*ESVRGF
Trigger: AAAACCTCTGACAGATTCCCAAAGGGTAAAGTTTAC...GATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCTCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR CAA 90 bp CACTCTGAGTACACATCTTCACAAATAATAGTCATCCCTTTGTCATaGCCGCCAATATCCAGGCGAGGTATCGGGAGACCCCCGACCTGC +
Preference number: 2 (lower is better)
Translates to: HSEYTSSQIIVIPLS*PPISRRGIGRPPTC
Trigger: GCAGGTCGGGGGTCTCCCGATACCTCGCCTGGATATTGGCGGCAATGACAAAGGGATGACTATTATTTGTGAAGATGTGTACTCAGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp GTGAGAGATGGGTCAGAGAGAGGTCACAGGAAAATGTCGTATGGCTaGTCTGGGCCACTGGGATTGTCCACTGTCTGGATTATGTCGACT +
Preference number: 2 (lower is better)
Translates to: VRDGSERGHRKMSYG*SGPLGLSTVWIMST
Trigger: AGTCGACATAATCCAGACAGTGGACAATCCCAGTGGCCCAGACAAGCCATACGACATTTTCCTGTGACCTCTCTCTGACCCATCTCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTCTATGGAAGTCATCTaGCAAAAGAGCACACGGAGA +
Preference number: 2 (lower is better)
Translates to: GERGRERERERGVSLNASSMEVI*QKSTRR
Trigger: TCTCCGTGTGCTCTTTTGTCAGATGACTTCCATAGA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCACACACACACCACTCTaGGTACACATCTTCACAAAT +
Preference number: 2 (lower is better)
Translates to: CSMLAVTEGLAICWSECSTHTPL*VHIFTN
Trigger: ATTTGTGAAGATGTGTACTCAGAGTGGTGTGTGTGT...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTGATCAGACGATCAGATaGCGGGGAAGGGCCACCTCT +
Preference number: 2 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCDQTIR*RGRATS
Trigger: AGAGGTGGCCCTTCCCCGGCATCTGATCGTCTGATC...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCTCGTGTCCACAGTCGTaGCTGCTGGAATGTTTCCAC +
Preference number: 2 (lower is better)
Translates to: NKINDVSCSMLAVTEGLASCPQS*LLECFH
Trigger: GTGGAAACATTCCAGCAGGCACGACTGTGGACACGA...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCACACACGAGCATCGCCTaGAAATCAACTTTAGTGACA +
Preference number: 2 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIAHTSIA*KSTLVT
Trigger: TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTG...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATCAAACGCGAAGATGGTaGGAGGGCCCAGCGCAGCAT +
Preference number: 2 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHQTRRW*EGPAQH
Trigger: ATGCTGCGCTGGGCCCTCCCACCATCTTCGCGTTTG...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCCAAGACATGGTCACATaGTTCCACTGTACAGGTAGA +
Preference number: 2 (lower is better)
Translates to: GERGRERERERGVSLNASQDMVT*FHCTGR
Trigger: TCTACCTGTACAGTGGAACCATGTGACCATGTCTTG...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAAACAAACTCGATTACTaGCTGTGCCTTGTAAAACGC +
Preference number: 2 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTNKLDY*LCLVKR
Trigger: GCGTTTTACAAGGCACAGCCAGTAATCGAGTTTGTT...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR CAA 90 bp ACACACCACTCTGAGTACACATCTTCACAAATAATAGTCATCCCTTaGTCATTGCCGCCAATATCCAGGCGAGGTATCGGGAGACCCCCG +
Preference number: 2 (lower is better)
Translates to: THHSEYTSSQIIVIP*SLPPISRRGIGRPP
Trigger: CGGGGGTCTCCCGATACCTCGCCTGGATATTGGCGGCAATGACAAAGGGATGACTATTATTTGTGAAGATGTGTACTCAGAGTGGTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp CCGCCATCCCCCAGACAGCCTGACGCAGGTGGAAGAAACACACCTTaGAGACACATGGTTCCAGATGATTGTAAAAATGGCTGGAAACTA +
Preference number: 2 (lower is better)
Translates to: PPSPRQPDAGGRNTP*RHMVPDDCKNGWKL
Trigger: TAGTTTCCAGCCATTTTTACAATCATCTGGAACCATGTGTCTCAAAGGTGTGTTTCTTCCACCTGCGTCAGGCTGTCTGGGGGATGGCGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp CTGTCAGATCATCGCCTGTCAACTCAGAGTAAACTCATGGAGAAATaGGGGCGAGCGCTAACCTCAAGATCGGGCAACATATGGAACCCA +
Preference number: 2 (lower is better)
Translates to: LSDHRLSTQSKLMEK*GRALTSRSGNIWNP
Trigger: TGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCTCGCCCCAATTTCTCCATGAGTTTACTCTGAGTTGACAGGCGATGATCTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp AGACATGTACAAAGGTGTGCAGCTGACCCAGCTGGAGATGTTTGGTCTATTAATACGGGGCCCACCTTCTaGCACTGCTCCTTAGTTCAG +
Preference number: 2 (lower is better)
Translates to: RHVQRCAADPAGDVWSINTGPTF*HCSLVQ
Trigger: CTGAACTAAGGAGCAGTGGCAGAAGGTGGGCCCCGT...ATTAATAGACCAAACATCTCCAGCTGGGTCAGCTGCACACCTTTGTACATGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCATCCAAGTTTGAAATCTaGGACGGAAGGCATTCTGGA +
Preference number: 2 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSSKFEI*DGRHSG
Trigger: TCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGA...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGTCACAAACGCGAAGATaGTGGGAGGGCCCAGCGCAG +
Preference number: 2 (lower is better)
Translates to: IARHVLLLRKCKNADHLMSQTRR*WEGPAQ
Trigger: CTGCGCTGGGCCCTCCCACCATCTTCGCGTTTGTGA...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGACCAACGTCCAGTTCCTaGAGACACTTGGGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRPTSSS*RHLGER
Trigger: TCTTTCCCCCAAGTGTCTCCAGGAACTGGACGTTGG...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGCCTCTGGCTTTCACGTaGACAGGGCTGGGACTTACC +
Preference number: 2 (lower is better)
Translates to: IARHVLLLRKCKNADHLMPLAFT*TGLGLT
Trigger: GGTAAGTCCCAGCCCTGTTCACGTGAAAGCCAGAGG...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCCATGTAAAGACTGCTTaGACCAGAGAAAACCAAAAC +
Preference number: 2 (lower is better)
Translates to: GERGRERERERGVSLNASHVKTA*TRENQN
Trigger: GTTTTGGTTTTCTCTGGTTCAAGCAGTCTTTACATG...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTAGCAGGCGGAGCAGATaGCTCCCGTCTGGACTGTCC +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFSRRSR*LPSGLS
Trigger: GGACAGTCCAGACGGGAGGCATCTGCTCCGCCTGCT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTTTTCTGACAGCAAAGTaGTTAATCACAGGGAGGGGT +
Preference number: 2 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSFLTAK*LITGRG
Trigger: ACCCCTCCCTGTGATTAACCACTTTGCTGTCAGAAA...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp AGAGGTCACAGGAAAATGTCGTATGGCTTGTCTGGGCCACTGGGATaGTCCACTGTCTGGATTATGTCGACTTCTAAAGCTCCTCCTAAT +
Preference number: 2 (lower is better)
Translates to: RGHRKMSYGLSGPLG*STVWIMSTSKAPPN
Trigger: ATTAGGAGGAGCTTTAGAAGTCGACATAATCCAGACAGTGGACAATCCCAGTGGCCCAGACAAGCCATACGACATTTTCCTGTGACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp AGCGCTAACCTCAAGATCGGGCAACATATGGAACCCAAAGAAAGAAGCGAAGGATCATTCAAAGGAGTGTaGGACCACCACCGAAAAGCA +
Preference number: 2 (lower is better)
Translates to: SANLKIGQHMEPKERSEGSFKGV*DHHRKA
Trigger: TGCTTTTCGGTGGTGGTCTCACACTCCTTTGAATGA...TCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp ATCAAACTCAGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTAAAATGGCACTTGTCTaGCAACCTCTCTGGACCTGG +
Preference number: 2 (lower is better)
Translates to: IKLRPGISMQRHPPYCRIKMALV*QPLWTW
Trigger: CCAGGTCCAGAGAGGTTGGCAGACAAGTGCCATTTT...AATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTAACAAGTACAGCAGATaGGAAGTGGGACATCGTAAA +
Preference number: 2 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSNKYSR*EVGHRK
Trigger: TTTACGATGTCCCACTTCGCATCTGCTGTACTTGTT...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp ATCAAACTCAGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTCCAACAGTTCCCTCTTaGGCAAGCTGTACAATGGTC +
Preference number: 2 (lower is better)
Translates to: IKLRPGISMQRHPPYCRIPTVPS*ASCTMV
Trigger: GACCATTGTACAGCTTGCCCAAGAGGGAACTGTTGG...AATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCAAAACCATATTTCCTATaGCATTGGGTTCTCATACAG +
Preference number: 2 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSKPYFL*HWVLIQ
Trigger: CTGTATGAGAACCCAATGTCATAGGAAATATGGTTT...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTGGATTGTCCACTGTCTaGATTATGTCGACTTCTAAA +
Preference number: 2 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSGLSTV*IMSTSK
Trigger: TTTAGAAGTCGACATAATCCAGACAGTGGACAATCC...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATCTCAGAGTAAACTCATaGAGAAATTGGGGCGAGCGC +
Preference number: 2 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHLRVNS*RNWGER
Trigger: GCGCTCGCCCCAATTTCTCCATGAGTTTACTCTGAG...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp GTGTACAGAGACAAAAAGCCCACTCAGCACAAACAGAGTTGTCTGTaGTTAGCCTTCAAAATCGTCCGTGGTGTCACTCTTAGTGCAACA +
Preference number: 2 (lower is better)
Translates to: VYRDKKPTQHKQSCL*LAFKIVRGVTLSAT
Trigger: TGTTGCACTAAGAGTGACACCACGGACGATTTTGAAGGCTAACAACAGACAACTCTGTTTGTGCTGAGTGGGCTTTTTGTCTCTGTACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp ACAAGCCCACAGACAATACATAGAGTACCACCTGAAACGAGGCCCTaGGAGCTGCTCAGCTTCTTAGAAAATAGAGAACTTTCAATGGTC +
Preference number: 2 (lower is better)
Translates to: TSPQTIHRVPPETRP*ELLSFLENRELSMV
Trigger: GACCATTGAAAGTTCTCTATTTTCTAAGAAGCTGAGCAGCTCCAAGGGCCTCGTTTCAGGTGGTACTCTATGTATTGTCTGTGGGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCGCACACGGAGAGGAGTaGGTCCCCACACATCAATGT +
Preference number: 2 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLAHGEE*VPTHQC
Trigger: ACATTGATGTGTGGGGACTCACTCCTCTCCGTGTGC...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGTACCCTACTGTACTTTaGGGTTTTTACACTGTCTCA +
Preference number: 2 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMYPTVL*GFYTVS
Trigger: TGAGACAGTGTAAAAACCTCAAAGTACAGTAGGGTA...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTGTTCTCATACAGGTCTaGAGTTCAAAATCCAAGTTT +
Preference number: 2 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSVLIQV*SSKSKF
Trigger: AAACTTGGATTTTGAACTGCAGACCTGTATGAGAAC...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTAAAACACTCTTGATATaGCAAACAGATCACAGAAGC +
Preference number: 2 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSKTLLI*QTDHRS
Trigger: GCTTCTGTGATCTGTTTGGCATATCAAGAGTGTTTT...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATGAGAAACCACACGACTaGAACCAAGTGTTTTCCGCA +
Preference number: 2 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHEKPHD*NQVFSA
Trigger: TGCGGAAAACACTTGGTTCCAGTCGTGTGGTTTCTC...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGAATTCCATGACCAATTaGACTTTTCTCCCACCTGTA +
Preference number: 2 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMNSMTN*TFLPPV
Trigger: TACAGGTGGGAGAAAAGTCCAATTGGTCATGGAATT...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGGTAGGTCAGGAGAGATaGAATCGACAACAGTCCGTT +
Preference number: 2 (lower is better)
Translates to: IARHVLLLRKCKNADHLMVGQER*NRQQSV
Trigger: AACGGACTGTTGTCGATTTCATCTCTCCTGACCTAC...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTCATGAGCGTGAGAGATaGGTCAGAGAGAGGTCACAG +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFHERER*VRERSQ
Trigger: CTGTGACCTCTCTCTGACCCATCTCTCACGCTCATG...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTACAGCAGATGCGAAGTaGGACATCGTAAAAAGAAGT +
Preference number: 2 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCTADAK*DIVKRS
Trigger: ACTTCTTTTTACGATGTCCCACTTCGCATCTGCTGT...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCTCGAACTCGGTGGGGTaGGTGATTTTCGTGTCCACA +
Preference number: 2 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLSNSVG*VIFVST
Trigger: TGTGGACACGAAAATCACCCACCCCACCGAGTTCGA...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR TCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGGAAGAAACACACCTTTaGGACACATGGTTCCAGATG +
Preference number: 2 (lower is better)
Translates to: IARHVLLLRKCKNADHLMEETHL*DTWFQM
Trigger: CATCTGGAACCATGTGTCTCAAAGGTGTGTTTCTTC...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGAATAAAATCACCCCTTaGCAGGGACAGGTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: IARHVLLLRKCKNADHLMNKITP*QGQVVS
Trigger: AGAAACCACCTGTCCCTGTCAAGGGGTGATTTTATT...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTATCTATGAAGTCGCTTaGACTGTGCCCTGCTGGTTG +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFIYEVA*TVPCWL
Trigger: CAACCAGCAGGGCACAGTGCAAGCGACTTCATAGAT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp AGCGCTAACCTCAAGATCGGGCAACATATGGAACCCAAAGAAAGAAGCGAAGGACTTTTCGAAGTACTCTaGCCCACTAAAAATGAAAGT +
Preference number: 2 (lower is better)
Translates to: SANLKIGQHMEPKERSEGLFEVL*PTKNES
Trigger: ACTTTCATTTTTAGTGGGCCAGAGTACTTCGAAAAG...TCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTCCGCACAGAACAGCGTaGCGGCAGAATTACAAAACA +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFPHRTA*RQNYKT
Trigger: TGTTTTGTAATTCTGCCGCCACGCTGTTCTGTGCGG...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp TACAGAAACTGCCAATTCACAAAACAGCACTGCATGGTTTCTATATaGCAAGCACAAGACATGGTCACATGGTTCCACTGTACAGGTAGA +
Preference number: 2 (lower is better)
Translates to: YRNCQFTKQHCMVSI*QAQDMVTWFHCTGR
Trigger: TCTACCTGTACAGTGGAACCATGTGACCATGTCTTGTGCTTGCAATATAGAAACCATGCAGTGCTGTTTTGTGAATTGGCAGTTTCTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGGCTCCAAAACACTCTTaGTATGCCAAACAGATCACA +
Preference number: 2 (lower is better)
Translates to: IARHVLLLRKCKNADHLMAPKHS*YAKQIT
Trigger: TGTGATCTGTTTGGCATATCAAGAGTGTTTTGGAGC...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR TCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTCCCCACTACAGGAACTaGACTGACATGATCTGTTCT +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFPHYRN*TDMICS
Trigger: AGAACAGATCATGTCAGTTCAGTTCCTGTAGTGGGG...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp TATGACATTGGGTTCTCATACAGGTCTGCAGTTCAAAATCCAAGTTaGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAAT +
Preference number: 2 (lower is better)
Translates to: YDIGFSYRSAVQNPS*KSGTEGILENGESN
Trigger: ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAACTGCAGACCTGTATGAGAACCCAATGTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR TCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTAGCTACAGAAAGAACTaGATAAGAATGGCCCCAACG +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFSYRKN*IRMAPT
Trigger: CGTTGGGGCCATTCTTATTCAGTTCTTTCTGTAGCT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGCATTGTAAAGAAAGCTaGGTCCCCTCCATTTTATCT +
Preference number: 2 (lower is better)
Translates to: IARHVLLLRKCKNADHLMHCKES*VPSILS
Trigger: AGATAAAATGGAGGGGACCCAGCTTTCTTTACAATG...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp AATGAATTAAGAAAGCAGCATGAACAGGAAGGATTCAGAACATTATaGTCTGCTTATAAACACAGTGTCTGCCTCCTCAGGTGTATTTGG +
Preference number: 2 (lower is better)
Translates to: NELRKQHEQEGFRTL*SAYKHSVCLLRCIW
Trigger: CCAAATACACCTGAGGAGGCAGACACTGTGTTTATAAGCAGACAATAATGTTCTGAATCCTTCCTGTTCATGCTGCTTTCTTAATTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTTTTTCACATTCAGTTTaGTTAAAGCAAGGCACACCT +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFFSHSV*LKQGTP
Trigger: AGGTGTGCCTTGCTTTAAGCAAACTGAATGTGAAAA...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTGTACAGAAATCGAATTaGGAGACCTCTTTTAAAGAG +
Preference number: 2 (lower is better)
Translates to: CLISATHLGSCYFLNRNFVQKSN*ETSFKE
Trigger: CTCTTTAAAAGAGGTCTCCCAATTCGATTTCTGTAC...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 90 bp AACTTTAGTGACAACATCAGAATGTTCAAGGCTTTAAAACCACACTaGTGTTTTGTGTTGCTTTCACTCTCAGAAGATTCACAGCTAGTT +
Preference number: 2 (lower is better)
Translates to: NFSDNIRMFKALKPH*CFVLLSLSEDSQLV
Trigger: AACTAGCTGTGAATCTTCTGAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTGATGTTGTCACTAAAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR CCA 72 bp TGGCGAGCGGCGCGGAGGGCACATCCGTCCCTCCCATaGGTACACGCTGCACAGTCTCCACGGGGGAAGCGG +
Preference number: 3 (lower is better)
Translates to: WRAARRAHPSLP*VHAAQSPRGKR
Trigger: CCGCTTCCCCCGTGGAGACTGTGCAGCGTGTACCCATGGGAGGGACGGATGTGCCCTCCGCGCCGCTCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp GGACCCAAGCAGCCTGTACCCTGGGCCGGCAGGCAGTaGGACACCCACGGGGGCCCAAGCCTCTTGAGGTCG +
Preference number: 3 (lower is better)
Translates to: GPKQPVPWAGRQ*DTHGGPSLLRS
Trigger: CGACCTCAAGAGGCTTGGGCCCCCGTGGGTGTCCCACTGCCTGCCGGCCCAGGGTACAGGCTGCTTGGGTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp GGTGCTGCTGCACGCGCACGGTGGCGCAGTAGCGATTaGGGTGGGCGTCCATGCTGCCCACCACGGCGGCAA +
Preference number: 3 (lower is better)
Translates to: GAAARARWRSSD*GGRPCCPPRRQ
Trigger: TTGCCGCCGTGGTGGGCAGCATGGACGCCCACCCCAATCGCTACTGCGCCACCGTGCGCGTGCAGCAGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CAA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCCTCAGTCGAGGAACTaGGGTGAGCCACGCCAGGGG +
Preference number: 3 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPPQSRN*GEPRQG
Trigger: CCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGG...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR TCA 72 bp GCAGGCAGTGGGACACCCACGGGGGCCCAAGCCTCTTaGGGTCGGTCCGCACAGAACAGCGTGGCGGCAGAA +
Preference number: 3 (lower is better)
Translates to: AGSGTPTGAQAS*GRSAQNSVAAE
Trigger: TTCTGCCGCCACGCTGTTCTGTGCGGACCGACCTCAAGAGGCTTGGGCCCCCGTGGGTGTCCCACTGCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTaGATGGCCACCGGCCCTCAGTCGAGGAACTTGGGT +
Preference number: 3 (lower is better)
Translates to: AVLAEHGTCGRL*MATGPQSRNLG
Trigger: ACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR TCA 72 bp GCTTGCGGTGGATCTGCGTGCTGCAGCTCCCATGACTaGGTCGAGGGGCGAGCGGCTGTGCAGTGTCCCCTC +
Preference number: 3 (lower is better)
Translates to: ACGGSACCSSHD*VEGRAAVQCPL
Trigger: GAGGGGACACTGCACAGCCGCTCGCCCCTCGACTCAGTCATGGGAGCTGCAGCACGCAGATCCACCGCAAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GCGGAGGGCACATCCGTCCCTCCCATGGGTACACGCTaGACAGTCTCCACGGGGGAAGCGGGTTGCTGTCAC +
Preference number: 3 (lower is better)
Translates to: AEGTSVPPMGTR*TVSTGEAGCCH
Trigger: GTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTACCCATGGGAGGGACGGATGTGCCCTCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp AACCCCAGAAGAACGGCCCATGCCCTCTGCTGGCCCTaGTATCCTTGGGCCTCCCAGGGCCAGGCAAGCTCC +
Preference number: 3 (lower is better)
Translates to: NPRRTAHALCWP*YPWASQGQASS
Trigger: GGAGCTTGCCTGGCCCTGGGAGGCCCAAGGATAGCAGGGCCAGCAGAGGGCATGGGCCGTTCTTCTGGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GTGGGAGGGCCCAGCGCAGCATTCCGGAGATGCGCGTaGAGGAAGCTTGCGGTGGATCTGCGTGCTGCAGCT +
Preference number: 3 (lower is better)
Translates to: VGGPSAAFRRCA*RKLAVDLRAAA
Trigger: AGCTGCAGCACGCAGATCCACCGCAAGCTTCCTGCACGCGCATCTCCGGAATGCTGCGCTGGGCCCTCCCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATaGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGC +
Preference number: 3 (lower is better)
Translates to: CWQNTAPADASA*PPALSRGTWVS
Trigger: GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CAA 90 bp ACCGCCTTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGGTGTCTCCCACGCGCTaGACCTCGGCGTACACGGGC +
Preference number: 3 (lower is better)
Translates to: TALASAWWSRPLLCPEVWVSPTR*TSAYTG
Trigger: GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACAC...CCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR TCA 72 bp GGAAGCTTGCGGTGGATCTGCGTGCTGCAGCTCCCATaGCTGAGTCGAGGGGCGAGCGGCTGTGCAGTGTCC +
Preference number: 3 (lower is better)
Translates to: GSLRWICVLQLP*LSRGASGCAVS
Trigger: GGACACTGCACAGCCGCTCGCCCCTCGACTCAGTCATGGGAGCTGCAGCACGCAGATCCACCGCAAGCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp AGGAGGCCCTTGCGTCCTAGTAGCAGGCGGAGCAGATaGCTCCCGTCTGGACTGTCCCAGGCTGGGTGGAAC +
Preference number: 3 (lower is better)
Translates to: RRPLRPSSRRSR*LPSGLSQAGWN
Trigger: GTTCCACCCAGCCTGGGACAGTCCAGACGGGAGGCATCTGCTCCGCCTGCTACTAGGACGCAAGGGCCTCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp CCAAATGCAAACCCCAGAAGAACGGCCCATGCCCTCTaGTGGCCCTGCTATCCTTGGGCCTCCCAGGGCCAG +
Preference number: 3 (lower is better)
Translates to: PNANPRRTAHAL*WPCYPWASQGQ
Trigger: CTGGCCCTGGGAGGCCCAAGGATAGCAGGGCCAGCAGAGGGCATGGGCCGTTCTTCTGGGGTTTGCATTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp CCCAAAGGCCTCCTGGGGACACTCCGGTGTCCCGGCTaGCTGACGTGTGGCCGGTCTATCCTAGCGTATTGT +
Preference number: 3 (lower is better)
Translates to: PKGLLGTLRCPG*LTCGRSILAYC
Trigger: ACAATACGCTAGGATAGACCGGCCACACGTCAGGCAGCCGGGACACCGGAGTGTCCCCAGGAGGCCTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp AAGATGGTGGGAGGGCCCAGCGCAGCATTCCGGAGATaGGCGTGCAGGAAGCTTGCGGTGGATCTGCGTGCT +
Preference number: 3 (lower is better)
Translates to: KMVGGPSAAFRR*ACRKLAVDLRA
Trigger: AGCACGCAGATCCACCGCAAGCTTCCTGCACGCGCATCTCCGGAATGCTGCGCTGGGCCCTCCCACCATCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GCCTTGGCACCACCAGCTTCTTGGGACAGAGGGACCTaGCGTCTCCCACCCAAGACTGCGCACACAACTCCC +
Preference number: 3 (lower is better)
Translates to: ALAPPASWDRGT*RLPPKTAHTTP
Trigger: GGGAGTTGTGTGCGCAGTCTTGGGTGGGAGACGGCAGGTCCCTCTGTCCCAAGAAGCTGGTGGTGCCAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp TACAGGCACACAGGGCCGCTGCTGAATGCAGGCCTCTaGCTCCACAAAGCCACGAGCTCTGGCTCGCCCCTT +
Preference number: 3 (lower is better)
Translates to: YRHTGPLLNAGL*LHKATSSGSPL
Trigger: AAGGGGCGAGCCAGAGCTCGTGGCTTTGTGGAGGCAGAGGCCTGCATTCAGCAGCGGCCCTGTGTGCCTGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATaGCATGCCGTTATGCCGTCCCGTGCAGAGAACCCT +
Preference number: 3 (lower is better)
Translates to: CHTCAGSCQPEG*HAVMPSRAENP
Trigger: AGGGTTCTCTGCACGGGACGGCATAACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp TTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTCTGCAGCGGGAATGTTaGGTGACTGGCGGGCCGCCG +
Preference number: 3 (lower is better)
Translates to: LASAWWSRPLLCPEVWLPLQREC*VTGGPP
Trigger: CGGCGGCCCGCCAGTCACCAAACATTCCCGCTGCAG...AGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR GCA 72 bp CAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTATaGCGTCCCGTGCAGAGAACCCTCCCATGCCATTCG +
Preference number: 3 (lower is better)
Translates to: QAPASLKDGMPL*RPVQRTLPCHS
Trigger: CGAATGGCATGGGAGGGTTCTCTGCACGGGACGGCATAACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp TTGGGACAGAGGGACCTGCCGTCTCCCACCCAAGACTaGGCACACAACTCCCAGAGTTCAAAGGAGCCCCGG +
Preference number: 3 (lower is better)
Translates to: LGQRDLPSPTQD*AHNSQSSKEPR
Trigger: CCGGGGCTCCTTTGAACTCTGGGAGTTGTGTGCGCAGTCTTGGGTGGGAGACGGCAGGTCCCTCTGTCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CCACGTCCAGGGCCTGGATCGTCTCAAAAGGGACGCTaGGCAGCCGCCCTGAAAGTGCATCGTGTAACGCCT +
Preference number: 3 (lower is better)
Translates to: PRPGPGSSQKGR*AAALKVHRVTP
Trigger: AGGCGTTACACGATGCACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGACGATCCAGGCCCTGGACGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR CCA 72 bp ATGGATGGCAAGTGCCTCATGACCACGTCCAGGGCCTaGATCGTCTCAAAAGGGACGCTGGGCAGCCGCCCT +
Preference number: 3 (lower is better)
Translates to: MDGKCLMTTSRA*IVSKGTLGSRP
Trigger: AGGGCGGCTGCCCAGCGTCCCTTTTGAGACGATCCAGGCCCTGGACGTGGTCATGAGGCACTTGCCATCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR GCA 72 bp CAAGGCCCCAGGCACCCACATGATCAGACGATCAGATaGCGGGGAAGGGCCACCTCTGGCTTTCACGTGAAC +
Preference number: 3 (lower is better)
Translates to: QGPRHPHDQTIR*RGRATSGFHVN
Trigger: GTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGTCTGATCATGTGGGTGCCTGGGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GCAATGAGACCGAGTGCGTCCCCCGCGGCTCCAGACTaGATGGCATCACAGTTTACAAGTCAGGGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: AMRPSASPAAPD*MASQFTSQGLR
Trigger: CCTCAGCCCCTGACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTCTCATTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TGGAGACAGAGGAAGGCCTTGGCACCACCAGCTTCTTaGGACAGAGGGACCTGCCGTCTCCCACCCAAGACT +
Preference number: 3 (lower is better)
Translates to: WRQRKALAPPAS*DRGTCRLPPKT
Trigger: AGTCTTGGGTGGGAGACGGCAGGTCCCTCTGTCCCAAGAAGCTGGTGGTGCCAAGGCCTTCCTCTGTCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CTTCCAAGGCTGGAGGTCCACGCCTGCCTTGTGGAATaGCACAGGCTTAGTTCCCCAGAGAAACGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: LPRLEVHACLVE*HRLSSPEKRSP
Trigger: GGGGCTGCGTTTCTCTGGGGAACTAAGCCTGTGCCATTCCACAAGGCAGGCGTGGACCTCCAGCCTTGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TCAGGGGCTGAGGAGCGGAAAGAAAGCTTCCAAGGCTaGAGGTCCACGCCTGCCTTGTGGAATGGCACAGGC +
Preference number: 3 (lower is better)
Translates to: SGAEERKESFQG*RSTPALWNGTG
Trigger: GCCTGTGCCATTCCACAAGGCAGGCGTGGACCTCCAGCCTTGGAAGCTTTCTTTCCGCTCCTCAGCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp TTGCTGGGTGTGACACAGGGTAGCCTGACCACAGAGTaGCACACGGGGGCTACAGCACACGCTGCTACTCCA +
Preference number: 3 (lower is better)
Translates to: LLGVTQGSLTTE*HTGATAHAATP
Trigger: TGGAGTAGCAGCGTGTGCTGTAGCCCCCGTGTGTCACTCTGTGGTCAGGCTACCCTGTGTCACACCCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp GAGACTGGGTCTTCCAGAACGCGATCAGGCTGGCACTaGTGGAGACAGAGGAAGGCCTTGGCACCACCAGCT +
Preference number: 3 (lower is better)
Translates to: ETGSSRTRSGWH*WRQRKALAPPA
Trigger: AGCTGGTGGTGCCAAGGCCTTCCTCTGTCTCCATCAGTGCCAGCCTGATCGCGTTCTGGAAGACCCAGTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp AACAGGGGCACCCCCATGACAAAGTCACAGGTGCACTaGATCCGCACCGAGAAGCGTCACAGCAGACGAGAC +
Preference number: 3 (lower is better)
Translates to: NRGTPMTKSQVH*IRTEKRHSRRD
Trigger: GTCTCGTCTGCTGTGACGCTTCTCGGTGCGGATGCAGTGCACCTGTGACTTTGTCATGGGGGTGCCCCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp CGACTGGAACCAAGTGTTTTCCGCAATGAGACCGAGTaGGTCCCCCGCGGCTCCAGACTGCATGGCATCACA +
Preference number: 3 (lower is better)
Translates to: RLEPSVFRNETE*VPRGSRLHGIT
Trigger: TGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTCTCATTGCGGAAAACACTTGGTTCCAGTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp CTTCCTAACTTACAGGCACACAGGGCCGCTGCTGAATaGAGGCCTCTGCCTCCACAAAGCCACGAGCTCTGG +
Preference number: 3 (lower is better)
Translates to: LPNLQAHRAAAE*RPLPPQSHELW
Trigger: CCAGAGCTCGTGGCTTTGTGGAGGCAGAGGCCTGCATTCAGCAGCGGCCCTGTGTGCCTGTAAGTTAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp GAATGCAGGCCTCTGCCTCCACAAAGCCACGAGCTCTaGCTCGCCCCTTTCTGTCCATGGCCATTAGCACCT +
Preference number: 3 (lower is better)
Translates to: ECRPLPPQSHEL*LAPFCPWPLAP
Trigger: AGGTGCTAATGGCCATGGACAGAAAGGGGCGAGCCAGAGCTCGTGGCTTTGTGGAGGCAGAGGCCTGCATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGGTTCAAAATCCAAGTTaGAAATCTGGGACGGAAGGC +
Preference number: 3 (lower is better)
Translates to: PALSRGTWVSHARGTRASVQNPS*KSGTEG
Trigger: GCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAAC...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CAA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGGTTCAAAATCCAAGTTaGAAATCTGGGACGGAAGGC +
Preference number: 3 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTVQNPS*KSGTEG
Trigger: GCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAAC...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR-3UTR CAA 90 bp GTAGAGGATGGAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCAACTTGTGCCTGTCCTaGAAATACTGGGCCACCGTG +
Preference number: 3 (lower is better)
Translates to: VEDGGRLQHPPSHVCHLINLCLS*KYWATV
Trigger: CACGGTGGCCCAGTATTTCAAGGACAGGCACAAGTT...GATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCTCTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CAA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAACCACACTTGTGTTTaGTGTTGCTTTCACTCTCAG +
Preference number: 3 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTNHTCV*CCFHSQ
Trigger: CTGAGAGTGAAAGCAACACAAAACACAAGTGTGGTT...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR TCA 72 bp GCGCACAGCAGCACTAGGGGAGGCTCGCCTCCTTCCTaGCGCCTCTACACGGAACATGGATTTGAGTCTTAC +
Preference number: 3 (lower is better)
Translates to: AHSSTRGGSPPS*RLYTEHGFESY
Trigger: GTAAGACTCAAATCCATGTTCCGTGTAGAGGCGTCAGGAAGGAGGCGAGCCTCCCCTAGTGCTGCTGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp GAGTCAGCGTGTGTGTGTGTAACAGGGGCACCCCCATaGCAAAGTCACAGGTGCACTGCATCCGCACCGAGA +
Preference number: 3 (lower is better)
Translates to: ESACVCVTGAPP*QSHRCTASAPR
Trigger: TCTCGGTGCGGATGCAGTGCACCTGTGACTTTGTCATGGGGGTGCCCCTGTTACACACACACACGCTGACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp CCGGGGCCAAACTCAATGTCTGATGAGCAGCCAACATaGGAACGGGGCCACCTCCAAACACCCAGACACCTC +
Preference number: 3 (lower is better)
Translates to: PGPNSMSDEQPT*ERGHLQTPRHL
Trigger: GAGGTGTCTGGGTGTTTGGAGGTGGCCCCGTTCTCATGTTGGCTGCTCATCAGACATTGAGTTTGGCCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp AGAAACCACACGACTGGAACCAAGTGTTTTCCGCAATaGGACCGAGTGCGTCCCCCGCGGCTCCAGACTGCA +
Preference number: 3 (lower is better)
Translates to: RNHTTGTKCFPQ*DRVRPPRLQTA
Trigger: TGCAGTCTGGAGCCGCGGGGGACGCACTCGGTCTCATTGCGGAAAACACTTGGTTCCAGTCGTGTGGTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GCTGTTTCAAGATTTTGCCACACCTGCGCAGGCTCCTaGCAGCCTGAAGGATGGCATGCCGTTATGCCGTCC +
Preference number: 3 (lower is better)
Translates to: AVSRFCHTCAGS*QPEGWHAVMPS
Trigger: GGACGGCATAACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCTTGAAACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp TGTTCAGAGCCTCCCAGGACCGACTTCCTGCAAGTCTaGATCAGACGGTCCACTGCGCCACTAGTGGGAACT +
Preference number: 3 (lower is better)
Translates to: CSEPPRTDFLQV*IRRSTAPLVGT
Trigger: AGTTCCCACTAGTGGCGCAGTGGACCGTCTGATGCAGACTTGCAGGAAGTCGGTCCTGGGAGGCTCTGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp ACACGAGCACCCCGATCTATGAAGTCGCTTGCACTGTaGCCTGCTGGTTGGTGCTGTGGGGTGTTCTTGGGA +
Preference number: 3 (lower is better)
Translates to: TRAPRSMKSLAL*PAGWCCGVFLG
Trigger: TCCCAAGAACACCCCACAGCACCAACCAGCAGGGCACAGTGCAAGCGACTTCATAGATCGGGGTGCTCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTaGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCG +
Preference number: 3 (lower is better)
Translates to: SMLAVTEGLAIC*SECSWSRESHS
Trigger: CGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR CCA 72 bp TTGGGGCGAGCGCTAACCTCAAGATCGGGCAACATATaGAACCCAAAGAAAGAAGCGAAGGAGGCCCCGGGC +
Preference number: 3 (lower is better)
Translates to: LGRALTSRSGNI*NPKKEAKEAPG
Trigger: GCCCGGGGCCTCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCTCGCCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAAAACAGGACGGTGGCTTaGCGTCACCGAAGGGCTCAC +
Preference number: 3 (lower is better)
Translates to: NPGRGGLGQGMGETTRLENRTVA*RHRRAH
Trigger: GTGAGCCCTTCGGTGACGCAAAGCCACCGTCCTGTT...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp TCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTaGACAGGGCTGGGACTTACCCTACTGTACTTTGAG +
Preference number: 3 (lower is better)
Translates to: SDAGEGPPLAFT*TGLGLTLLYFE
Trigger: CTCAAAGTACAGTAGGGTAAGTCCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp ATGGCACTTGTCTGCCAACCTCTCTGGACCTGGAAATaGTGTAAACACACGGGGCCCACCTTCTGCCACTGC +
Preference number: 3 (lower is better)
Translates to: MALVCQPLWTWK*CKHTGPTFCHC
Trigger: GCAGTGGCAGAAGGTGGGCCCCGTGTGTTTACAGCATTTCCAGGTCCAGAGAGGTTGGCAGACAAGTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp TCACAGCAGACGAGACTGCTGGCACGGCAGCTAGAGTaGAACTCCTCGGTCACTTTGGGGAAGGGCTTCAAA +
Preference number: 3 (lower is better)
Translates to: SQQTRLLARQLE*NSSVTLGKGFK
Trigger: TTTGAAGCCCTTCCCCAAAGTGACCGAGGAGTTGCACTCTAGCTGCCGTGCCAGCAGTCTCGTCTGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp ACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTaGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTG +
Preference number: 3 (lower is better)
Translates to: TSHVRCWLSRKG*PSVGLSVAGLV
Trigger: CACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR CCA 72 bp GAAAGCTTCCAAGGCTGGAGGTCCACGCCTGCCTTGTaGAATGGCACAGGCTTAGTTCCCCAGAGAAACGCA +
Preference number: 3 (lower is better)
Translates to: ESFQGWRSTPAL*NGTGLVPQRNA
Trigger: TGCGTTTCTCTGGGGAACTAAGCCTGTGCCATTCCACAAGGCAGGCGTGGACCTCCAGCCTTGGAAGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGGGTAAACTTTACCCTTaGGGAATCTGTCAGAGGTTT +
Preference number: 3 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRGKLYP*GICQRF
Trigger: AAACCTCTGACAGATTCCCAAAGGGTAAAGTTTACC...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR GCA 72 bp GAGCTTAGGACACACAAAACAACAGGACGGTGGCTTTaGGTCACCGAAGGGCTCACACACGAGGGCAGCTTT +
Preference number: 3 (lower is better)
Translates to: ELRTHKTTGRWL*VTEGLTHEGSF
Trigger: AAAGCTGCCCTCGTGTGTGAGCCCTTCGGTGACGCAAAGCCACCGTCCTGTTGTTTTGTGTGTCCTAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GACCACAGAGTGACACACGGGGGCTACAGCACACGCTaGTACTCCAGCAAAATAACGGGCACAAATGACAGC +
Preference number: 3 (lower is better)
Translates to: DHRVTHGGYSTR*YSSKITGTNDS
Trigger: GCTGTCATTTGTGCCCGTTATTTTGCTGGAGTAGCAGCGTGTGCTGTAGCCCCCGTGTGTCACTCTGTGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp ATGGGCATGCCGGCGTCTCTCGAGATCTTTCTGAGCTaGTCTGTGAAGGACTTCAGATGGACTTCCGTGCAC +
Preference number: 3 (lower is better)
Translates to: MGMPASLEIFLS*SVKDFRWTSVH
Trigger: GTGCACGGAAGTCCATCTGAAGTCCTTCACAGAGCAGCTCAGAAAGATCTCGAGAGACGCCGGCATGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR GCA 72 bp TGTTTCCACTTTTCCCAACCCGCTCGTTCTTGTCAGTaGAGAAGAGCCGGGTGTGGTGCCTCTTCTGCACCA +
Preference number: 3 (lower is better)
Translates to: CFHFSQPARSCQ*RRAGCGASSAP
Trigger: TGGTGCAGAAGAGGCACCACACCCGGCTCTTCTGCACTGACAAGAACGAGCGGGTTGGGAAAAGTGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR CCA 72 bp GGGCTCACACACGAGGGCAGCTTTCCACCGCTCCCCTaGTGTTCGTTAATTGCGTCGTCATTACAGCAAGAA +
Preference number: 3 (lower is better)
Translates to: GLTHEGSFPPLP*CSLIASSLQQE
Trigger: TTCTTGCTGTAATGACGACGCAATTAACGAACACCAGGGGAGCGGTGGAAAGCTGCCCTCGTGTGTGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CCTGGGGACACTCCGGTGTCCCGGCTGCCTGACGTGTaGCCGGTCTATCCTAGCGTATTGTATCAAATATAT +
Preference number: 3 (lower is better)
Translates to: PGDTPVSRLPDV*PVYPSVLYQIY
Trigger: ATATATTTGATACAATACGCTAGGATAGACCGGCCACACGTCAGGCAGCCGGGACACCGGAGTGTCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TCACTTCTGAGTAAATTCTCACAAACGCGAAGATGGTaGGAGGGCCCAGCGCAGCATTCCGGAGATGCGCGT +
Preference number: 3 (lower is better)
Translates to: SLLSKFSQTRRW*EGPAQHSGDAR
Trigger: ACGCGCATCTCCGGAATGCTGCGCTGGGCCCTCCCACCATCTTCGCGTTTGTGAGAATTTACTCAGAAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CTCTCACTTCTGAGTAAATTCTCACAAACGCGAAGATaGTGGGAGGGCCCAGCGCAGCATTCCGGAGATGCG +
Preference number: 3 (lower is better)
Translates to: LSLLSKFSQTRR*WEGPAQHSGDA
Trigger: CGCATCTCCGGAATGCTGCGCTGGGCCCTCCCACCATCTTCGCGTTTGTGAGAATTTACTCAGAAGTGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp ACCCCGATCTATGAAGTCGCTTGCACTGTGCCCTGCTaGTTGGTGCTGTGGGGTGTTCTTGGGATCAACTCA +
Preference number: 3 (lower is better)
Translates to: TPIYEVACTVPC*LVLWGVLGINS
Trigger: TGAGTTGATCCCAAGAACACCCCACAGCACCAACCAGCAGGGCACAGTGCAAGCGACTTCATAGATCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp GGGTCTTGCACCAATCTCCTGCAATCCTGGCAGAGGTaGACTTGGTCAGGGTATGGGAGAAACCACACGACT +
Preference number: 3 (lower is better)
Translates to: GSCTNLLQSWQR*TWSGYGRNHTT
Trigger: AGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCCTCAAAGACCATGCTTaGGAGAGCCACGGTAAGCGA +
Preference number: 3 (lower is better)
Translates to: GERGRERERERGVSLNASLKDHA*ESHGKR
Trigger: TCGCTTACCGTGGCTCTCCAAAGCATGGTCTTTGAG...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp CAGACTGCATGGCATCACAGTTTACAAGTCAGGGGCTaGGGAGCGGAAAGAAAGCTTCCAAGGCTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: QTAWHHSLQVRG*GAERKLPRLEV
Trigger: GACCTCCAGCCTTGGAAGCTTTCTTTCCGCTCCTCAGCCCCTGACTTGTAAACTGTGATGCCATGCAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GGTCAGCCTCAAACAAACAGCGTGGAGGTCACTGCCTaGTTCCAACAGTTCCCTCTTGGGCAAGCTGTACAA +
Preference number: 3 (lower is better)
Translates to: GQPQTNSVEVTA*FQQFPLGQAVQ
Trigger: TTGTACAGCTTGCCCAAGAGGGAACTGTTGGAAGCAGGCAGTGACCTCCACGCTGTTTGTTTGAGGCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GAAGACGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTaGCTGATTTCAGCAACACATTTAGGATCATGCTAC +
Preference number: 3 (lower is better)
Translates to: EDGLSGETRGSG*LISATHLGSCY
Trigger: GTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCGTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CTGTCCCAGGCTGGGTGGAACTCAAAGACCATGCTTTaGAGAGCCACGGTAAGCGACGAGGAATCAAACAGA +
Preference number: 3 (lower is better)
Translates to: LSQAGWNSKTML*RATVSDEESNR
Trigger: TCTGTTTGATTCCTCGTCGCTTACCGTGGCTCTCCAAAGCATGGTCTTTGAGTTCCACCCAGCCTGGGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CCCAAGCCTCTTGAGGTCGGTCCGCACAGAACAGCGTaGCGGCAGAATTACAAAACATTCTCAGAGAGACTG +
Preference number: 3 (lower is better)
Translates to: PKPLEVGPHRTA*RQNYKTFSERL
Trigger: CAGTCTCTCTGAGAATGTTTTGTAATTCTGCCGCCACGCTGTTCTGTGCGGACCGACCTCAAGAGGCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CGATCTATGAAGTCGCTTGCACTGTGCCCTGCTGGTTaGTGCTGTGGGGTGTTCTTGGGATCAACTCACTCA +
Preference number: 3 (lower is better)
Translates to: RSMKSLALCPAG*CCGVFLGSTHS
Trigger: TGAGTGAGTTGATCCCAAGAACACCCCACAGCACCAACCAGCAGGGCACAGTGCAAGCGACTTCATAGATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp GTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTaGAACCAAGTGTTTTCCGCAATGAGACCGAGTGCG +
Preference number: 3 (lower is better)
Translates to: VDLVRVWEKPHD*NQVFSAMRPSA
Trigger: CGCACTCGGTCTCATTGCGGAAAACACTTGGTTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GGTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTaGTGTCACATTAAGTCAATTGCATATTCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: GTRCTVSTGEAG*CHIKSIAYSCP
Trigger: AGGACAGGAATATGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp TTTAGGTCAGCCTCAAACAAACAGCGTGGAGGTCACTaGCTGCTTCCAACAGTTCCCTCTTGGGCAAGCTGT +
Preference number: 3 (lower is better)
Translates to: FRSASNKQRGGH*LLPTVPSWASC
Trigger: ACAGCTTGCCCAAGAGGGAACTGTTGGAAGCAGGCAGTGACCTCCACGCTGTTTGTTTGAGGCTGACCTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GACCGACTTCCTGCAAGTCTGCATCAGACGGTCCACTaGGCCACTAGTGGGAACTTCTACTTCAAAACACCA +
Preference number: 3 (lower is better)
Translates to: DRLPASLHQTVH*ATSGNFYFKTP
Trigger: TGGTGTTTTGAAGTAGAAGTTCCCACTAGTGGCGCAGTGGACCGTCTGATGCAGACTTGCAGGAAGTCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp GGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTaGGACTTACCCTACTGTACTTTGAGGTTTTTACAC +
Preference number: 3 (lower is better)
Translates to: GKGHLWLSREQG*DLPYCTLRFLH
Trigger: GTGTAAAAACCTCAAAGTACAGTAGGGTAAGTCCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TGCTTAAAGCAAGGCACACCTTACTTAACAGTGGGATaGGGACAAAGCCAGCGAGTGGGCACCCCTCAAATC +
Preference number: 3 (lower is better)
Translates to: CLKQGTPYLTVG*GQSQRVGTPQI
Trigger: GATTTGAGGGGTGCCCACTCGCTGGCTTTGTCCCCATCCCACTGTTAAGTAAGGTGTGCCTTGCTTTAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp AGATGGGTCAGAGAGAGGTCACAGGAAAATGTCGTATaGCTTGTCTGGGCCACTGGGATTGTCCACTGTCTG +
Preference number: 3 (lower is better)
Translates to: RWVRERSQENVV*LVWATGIVHCL
Trigger: CAGACAGTGGACAATCCCAGTGGCCCAGACAAGCCATACGACATTTTCCTGTGACCTCTCTCTGACCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCGGCTCCAAAACACTCTaGATATGCCAAACAGATCAC +
Preference number: 3 (lower is better)
Translates to: CSMLAVTEGLAICWSECSGSKTL*ICQTDH
Trigger: GTGATCTGTTTGGCATATCAAGAGTGTTTTGGAGCC...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGGGCACCACCAGCTTCTaGGGACAGAGGGACCTGCCG +
Preference number: 3 (lower is better)
Translates to: IARHVLLLRKCKNADHLMGTTSF*GQRDLP
Trigger: CGGCAGGTCCCTCTGTCCCAAGAAGCTGGTGGTGCC...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp ATCAAACTCAGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTAGGTCCACGCCTGCCTaGTGGAATGGCACAGGCTTA +
Preference number: 3 (lower is better)
Translates to: IKLRPGISMQRHPPYCRIRSTPA*WNGTGL
Trigger: TAAGCCTGTGCCATTCCACAAGGCAGGCGTGGACCT...AATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp GAGAGGCGGTCCCATCTCCAGGCTCCAAAACACTCTTaGTATGCCAAACAGATCACAGAAGCACCCCATAGT +
Preference number: 3 (lower is better)
Translates to: ERRSHLQAPKHS*YAKQITEAPHS
Trigger: ACTATGGGGTGCTTCTGTGATCTGTTTGGCATATCAAGAGTGTTTTGGAGCCTGGAGATGGGACCGCCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GCTGATGGTCATGGTCAATGCATAAGAGATGGGTCTTaGACCAATCTCCTGCAATCCTGGCAGAGGTGGACT +
Preference number: 3 (lower is better)
Translates to: ADGHGQCIRDGS*TNLLQSWQRWT
Trigger: AGTCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAGACCCATCTCTTATGCATTGACCATGACCATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp AAACTTGCACTTCGCATCAATTTGCTAATCTCTTCTTaGCGATCGGGCGCCGACCTAGCAGTCGCTCTGATC +
Preference number: 3 (lower is better)
Translates to: KLALRINLLISS*RSGADLAVALI
Trigger: GATCAGAGCGACTGCTAGGTCGGCGCCCGATCGGCAAGAAGAGATTAGCAAATTGATGCGAAGTGCAAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR CCA 72 bp TTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTaGAAATCAACTTTAGTGACAACATCAGAATGTTCA +
Preference number: 3 (lower is better)
Translates to: LGEPRQGHTSIA*KSTLVTTSECS
Trigger: TGAACATTCTGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR CCA 72 bp ATTAAAATGGCACTTGTCTGCCAACCTCTCTGGACCTaGAAATGCTGTAAACACACGGGGCCCACCTTCTGC +
Preference number: 3 (lower is better)
Translates to: IKMALVCQPLWT*KCCKHTGPTFC
Trigger: GCAGAAGGTGGGCCCCGTGTGTTTACAGCATTTCCAGGTCCAGAGAGGTTGGCAGACAAGTGCCATTTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TTAGTGCAACAGTTTCTAGATTGGCAAACCCAAGTCTaGGGCCCCAAATGCAAACCCCAGAAGAACGGCCCA +
Preference number: 3 (lower is better)
Translates to: LVQQFLDWQTQV*GPKCKPQKNGP
Trigger: TGGGCCGTTCTTCTGGGGTTTGCATTTGGGGCCCCAGACTTGGGTTTGCCAATCTAGAAACTGTTGCACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TCCGTGGTGTCACTCTTAGTGCAACAGTTTCTAGATTaGCAAACCCAAGTCTGGGGCCCCAAATGCAAACCC +
Preference number: 3 (lower is better)
Translates to: SVVSLLVQQFLD*QTQVWGPKCKP
Trigger: GGGTTTGCATTTGGGGCCCCAGACTTGGGTTTGCCAATCTAGAAACTGTTGCACTAAGAGTGACACCACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp ATAAGAGATGGGTCTTGCACCAATCTCCTGCAATCCTaGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: IRDGSCTNLLQS*QRWTWSGYGRN
Trigger: GTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAGACCCATCTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CACCCCTTGACAGGGACAGGTGGTTTCTCAGGCCATTaGCCAAGAAACTGCTCAATACCTGGCTTGAAAAAG +
Preference number: 3 (lower is better)
Translates to: HPLTGTGGFSGH*PRNCSIPGLKK
Trigger: CTTTTTCAAGCCAGGTATTGAGCAGTTTCTTGGCCAATGGCCTGAGAAACCACCTGTCCCTGTCAAGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp CGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTCAGCACTGTCATGTTCCTTAGCACTTCGCATCAATTaGCTAATCTCTTCTTGCCGA +
Preference number: 3 (lower is better)
Translates to: RPLLCPEVWLPSALSCSLALRIN*LISSCR
Trigger: TCGGCAAGAAGAGATTAGCAAATTGATGCGAAGTGC...TAAGGAACATGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAGTAACGGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR TCA 72 bp GAGAAACGCAGCCCCAACATGATTCTGAAAGGACACTaGGGACCGGACTTTAAAGGCACAGAGTCTGAGACT +
Preference number: 3 (lower is better)
Translates to: EKRSPNMILKGH*GPDFKGTESET
Trigger: AGTCTCAGACTCTGTGCCTTTAAAGTCCGGTCCTCAGTGTCCTTTCAGAATCATGTTGGGGCTGCGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp GTCCTGGGGAGCCAATTGCCCGGCACGTCTTATTACTaGGAAAGTGCAAGAATGCTGATCATCTTATGCAGC +
Preference number: 3 (lower is better)
Translates to: VLGSQLPGTSYY*ESARMLIILCS
Trigger: GCTGCATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAATTGGCTCCCCAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CCACTAGTGGGAACTTCTACTTCAAAACACCAGCTGTaGGCCCTGTGTTCTTTTCAAACAAAGGGCCCTGGA +
Preference number: 3 (lower is better)
Translates to: PLVGTSTSKHQL*ALCSFQTKGPG
Trigger: TCCAGGGCCCTTTGTTTGAAAAGAACACAGGGCCCACAGCTGGTGTTTTGAAGTAGAAGTTCCCACTAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAATTATTAAAATGGCACTaGTCTGCCAACCTCTCTGGA +
Preference number: 3 (lower is better)
Translates to: NPGRGGLGQGMGETTRLELLKWH*SANLSG
Trigger: TCCAGAGAGGTTGGCAGACAAGTGCCATTTTAATAA...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTGATGCAAGGAGGCCCTaGCGTCCTAGTAGCAGGCGG +
Preference number: 3 (lower is better)
Translates to: CLISATHLGSCYFLNRNFDARRP*RPSSRR
Trigger: CCGCCTGCTACTAGGACGCAAGGGCCTCCTTGCATC...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACACCTTGTAAAACGCTGTaGCTGACACATCAATATTCA +
Preference number: 3 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTPCKTL*LTHQYS
Trigger: TGAATATTGATGTGTCAGCAACAGCGTTTTACAAGG...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR TCA 72 bp AAGTCAAAACTGGTGTCCTATGTGCACAGCTCAAGGTaGCACCACACCAAAGTAAGCGGTTTCCCAGGAAGT +
Preference number: 3 (lower is better)
Translates to: KSKLVSYVHSSR*HHTKVSGFPGS
Trigger: ACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAGCTGTGCACATAGGACACCAGTTTTGACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp ACAAGACCACCAGGCTTTGCTGATGGTCATGGTCAATaGATAAGAGATGGGTCTTGCACCAATCTCCTGCAA +
Preference number: 3 (lower is better)
Translates to: TRPPGFADGHGQ*IRDGSCTNLLQ
Trigger: TTGCAGGAGATTGGTGCAAGACCCATCTCTTATGCATTGACCATGACCATCAGCAAAGCCTGGTGGTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TGCTTCCAACAGTTCCCTCTTGGGCAAGCTGTACAATaGTCACGCATCGTTTGTGGTTCTAGAGTGCAAACA +
Preference number: 3 (lower is better)
Translates to: CFQQFPLGQAVQ*SRIVCGSRVQT
Trigger: TGTTTGCACTCTAGAACCACAAACGATGCGTGACCATTGTACAGCTTGCCCAAGAGGGAACTGTTGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TATGGCTTGTCTGGGCCACTGGGATTGTCCACTGTCTaGATTATGTCGACTTCTAAAGCTCCTCCTAATGGA +
Preference number: 3 (lower is better)
Translates to: YGLSGPLGLSTV*IMSTSKAPPNG
Trigger: TCCATTAGGAGGAGCTTTAGAAGTCGACATAATCCAGACAGTGGACAATCCCAGTGGCCCAGACAAGCCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp GTCACAGGAAAATGTCGTATGGCTTGTCTGGGCCACTaGGATTGTCCACTGTCTGGATTATGTCGACTTCTA +
Preference number: 3 (lower is better)
Translates to: VTGKCRMACLGH*DCPLSGLCRLL
Trigger: TAGAAGTCGACATAATCCAGACAGTGGACAATCCCAGTGGCCCAGACAAGCCATACGACATTTTCCTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGGGGCTGAAAAACTTCTaGCTGGGTGTGACACAGGGT +
Preference number: 3 (lower is better)
Translates to: IARHVLLLRKCKNADHLMGLKNF*LGVTQG
Trigger: ACCCTGTGTCACACCCAGCAAGAAGTTTTTCAGCCC...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTACCTTCTGTAGTGATTaGGCTAAGCCAATACATTCA +
Preference number: 3 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSTFCSD*AKPIHS
Trigger: TGAATGTATTGGCTTAGCCAAATCACTACAGAAGGT...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp CCAGACAGCCTGACGCAGGTGGAAGAAACACACCTTTaGGACACATGGTTCCAGATGATTGTAAAAATGGCT +
Preference number: 3 (lower is better)
Translates to: PDSLTQVEETHL*DTWFQMIVKMA
Trigger: AGCCATTTTTACAATCATCTGGAACCATGTGTCTCAAAGGTGTGTTTCTTCCACCTGCGTCAGGCTGTCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp CAGAGAGACTGCAAAGGACACTTAGCTCTTCCGGAATaGAAGCACGCAACGCAGCATAAAAAGCATCGAAAC +
Preference number: 3 (lower is better)
Translates to: QRDCKGHLALPE*KHATQHKKHRN
Trigger: GTTTCGATGCTTTTTATGCTGCGTTGCGTGCTTTCATTCCGGAAGAGCTAAGTGTCCTTTGCAGTCTCTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp TCGAGTGACTATGAGAACAAGACCACCAGGCTTTGCTaGTGGTCATGGTCAATGCATAAGAGATGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: SSDYENKTTRLC*WSWSMHKRWVL
Trigger: CAAGACCCATCTCTTATGCATTGACCATGACCATCAGCAAAGCCTGGTGGTCTTGTTCTCATAGTCACTCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp ATTTCAATGCAACGCCACCCTCCATACTGTAGGATTTaGGTCACGCGTGTCTGTTTGGCTTTGAAGAGGAAC +
Preference number: 3 (lower is better)
Translates to: ISMQRHPPYCRI*VTRVCLALKRN
Trigger: GTTCCTCTTCAAAGCCAAACAGACACGCGTGACTCAAATCCTACAGTATGGAGGGTGGCGTTGCATTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp CAGACCACAACAGTGTTCACAAGACTGCAACGAGTCTaGTTAGGACTAAATCATCAGGCACCAAGAGACCAT +
Preference number: 3 (lower is better)
Translates to: QTTTVFTRLQRV*LGLNHQAPRDH
Trigger: ATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTTGTGAACACTGTTGTGGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp GGTTCTCATACAGGTCTGCAGTTCAAAATCCAAGTTTaGAATCTGGGACGGAAGGCATTCTGGAAAACGGAG +
Preference number: 3 (lower is better)
Translates to: GSHTGLQFKIQV*NLGRKAFWKTE
Trigger: CTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAACTGCAGACCTGTATGAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR TCA 72 bp GCCTCCTTCCTGACGCCTCTACACGGAACATGGATTTaGGTCTTACTAAAACTGTGTACAGAGACAAAAAGC +
Preference number: 3 (lower is better)
Translates to: ASFLTPLHGTWI*VLLKLCTETKS
Trigger: GCTTTTTGTCTCTGTACACAGTTTTAGTAAGACTCAAATCCATGTTCCGTGTAGAGGCGTCAGGAAGGAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTaGATAGATCTATGGAAGTCATCTGACAAAAGAGCA +
Preference number: 3 (lower is better)
Translates to: AEPPPTAFYESQ*IDLWKSSDKRA
Trigger: TGCTCTTTTGTCAGATGACTTCCATAGATCTATGCACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GGGACAGGTGGTTTCTCAGGCCATTGGCCAAGAAACTaGTCAATACCTGGCTTGAAAAAGCTAGAGATAAAA +
Preference number: 3 (lower is better)
Translates to: GTGGFSGHWPRN*SIPGLKKLEIK
Trigger: TTTTATCTCTAGCTTTTTCAAGCCAGGTATTGAGCAGTTTCTTGGCCAATGGCCTGAGAAACCACCTGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp AGGCTTAATTTAAAGTGGCATTGCCACCTAGCATCATaGAAGCGTGGACATCTTCAAGACACACAGCATGGT +
Preference number: 3 (lower is better)
Translates to: RLNLKWHCHLAS*KRGHLQDTQHG
Trigger: ACCATGCTGTGTGTCTTGAAGATGTCCACGCTTGCATGATGCTAGGTGGCAATGCCACTTTAAATTAAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGAATCATCCAGCAAACTaGAAGGTAAACATTAGGCAA +
Preference number: 3 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMNHPAN*KVNIRQ
Trigger: TTGCCTAATGTTTACCTTCAAGTTTGCTGGATGATT...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp AACAAAAGCACCAGGAATCTTCAGTTCTCTCACTTCTaGGTAAATTCTCACAAACGCGAAGATGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: NKSTRNLQFSHF*VNSHKREDGGR
Trigger: CCTCCCACCATCTTCGCGTTTGTGAGAATTTACTCAGAAGTGAGAGAACTGAAGATTCCTGGTGCTTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TTTAAAGTGGCATTGCCACCTAGCATCATGCAAGCGTaGACATCTTCAAGACACACAGCATGGTATTCAACT +
Preference number: 3 (lower is better)
Translates to: FKVALPPSIMQA*TSSRHTAWYST
Trigger: AGTTGAATACCATGCTGTGTGTCTTGAAGATGTCCACGCTTGCATGATGCTAGGTGGCAATGCCACTTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR-3UTR CAA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTTCCAACAGTTCCCTCTaGGGCAAGCTGTACAATGGT +
Preference number: 3 (lower is better)
Translates to: CLISATHLGSCYFLNRNFSNSSL*GKLYNG
Trigger: ACCATTGTACAGCTTGCCCAAGAGGGAACTGTTGGA...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp GTGGTTCTAGAGTGCAAACATTCATTCAAAGGAGTGTaGGACCACCACCGAAAAGCAACATCATCTGGAAAA +
Preference number: 3 (lower is better)
Translates to: VVLECKHSFKGV*DHHRKATSSGK
Trigger: TTTTCCAGATGATGTTGCTTTTCGGTGGTGGTCTCACACTCCTTTGAATGAATGTTTGCACTCTAGAACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp GCCAATTCACAAAACAGCACTGCATGGTTTCTATATTaGAAGCACAAGACATGGTCACATGGTTCCACTGTA +
Preference number: 3 (lower is better)
Translates to: ANSQNSTAWFLY*KHKTWSHGSTV
Trigger: TACAGTGGAACCATGTGACCATGTCTTGTGCTTGCAATATAGAAACCATGCAGTGCTGTTTTGTGAATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp TTTATTGTACATTCCTTTTCTCATGAGCGTGAGAGATaGGTCAGAGAGAGGTCACAGGAAAATGTCGTATGG +
Preference number: 3 (lower is better)
Translates to: FIVHSFSHERER*VRERSQENVVW
Trigger: CCATACGACATTTTCCTGTGACCTCTCTCTGACCCATCTCTCACGCTCATGAGAAAAGGAATGTACAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp TTCAAACAAAGGGCCCTGGATTTGAACAGAATGCTTTaGTTTCAACCCTTAGTTTGTTTTGCAGTAGGGAGT +
Preference number: 3 (lower is better)
Translates to: FKQRALDLNRML*FQPLVCFAVGS
Trigger: ACTCCCTACTGCAAAACAAACTAAGGGTTGAAAGCAAAGCATTCTGTTCAAATCCAGGGCCCTTTGTTTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR GCA 72 bp AGAAAGGACCCAGCTAAGCTTAAACACGACAATAGATaGTCAGTTTCTCAGCATTTAGCTTTCTTCACCAGT +
Preference number: 3 (lower is better)
Translates to: RKDPAKLKHDNR*SVSQHLAFFTS
Trigger: ACTGGTGAAGAAAGCTAAATGCTGAGAAACTGAGCATCTATTGTCGTGTTTAAGCTTAGCTGGGTCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp ATAATTTCTATCATATCCATTAGGTACCACATGCACTaGAATATCTGTGTCGGCCAAACCAAACCAGAGCAG +
Preference number: 3 (lower is better)
Translates to: IISIISIRYHMH*NICVGQTKPEQ
Trigger: CTGCTCTGGTTTGGTTTGGCCGACACAGATATTCCAGTGCATGTGGTACCTAATGGATATGATAGAAATTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp GGTCACAGTATGGCACACACATTTTCAAGCCAGAACTaGACAGATAGATGTTCACAATTCAGTTTATTCAGG +
Preference number: 3 (lower is better)
Translates to: GHSMAHTFSSQN*TDRCSQFSLFR
Trigger: CCTGAATAAACTGAATTGTGAACATCTATCTGTTCAGTTCTGGCTTGAAAATGTGTGTGCCATACTGTGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp GCTTATAAACACAGTGTCTGCCTCCTCAGGTGTATTTaGCTAAAGTATTATTCTAATATAGGGCAACCTTCG +
Preference number: 3 (lower is better)
Translates to: AYKHSVCLLRCI*LKYYSNIGQPS
Trigger: CGAAGGTTGCCCTATATTAGAATAATACTTTAGCCAAATACACCTGAGGAGGCAGACACTGTGTTTATAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CCA 72 bp CTCATCTTTGACCATGATTCCAAATTCACGGACGTATaGATCTGTGTTGAAACTTGCACTTCGCATCAATTT +
Preference number: 3 (lower is better)
Translates to: LIFDHDSKFTDV*ICVETCTSHQF
Trigger: AAATTGATGCGAAGTGCAAGTTTCAACACAGATCCATACGTCCGTGAATTTGGAATCATGGTCAAAGATGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
3UTR-3UTR CAA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTGAAAATGAGGCGAACTaGTCCTTCATAAATGGTCAA +
Preference number: 3 (lower is better)
Translates to: CLISATHLGSCYFLNRNFENEAN*SFINGQ
Trigger: TTGACCATTTATGAAGGACAAGTTCGCCTCATTTTC...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp ATTATTTGCATGACAGTCGGTGTTGAAGCACCTTTGTaGTTTTACAGAGTGTATAAAAGAGAGGAGAGGACA +
Preference number: 3 (lower is better)
Translates to: IICMTVGVEAPL*FYRVYKREERT
Trigger: TGTCCTCTCCTCTCTTTTATACACTCTGTAAAATCACAAAGGTGCTTCAACACCGACTGTCATGCAAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR TCA 72 bp GTGTTGCTTTCACTCTCAGAAGATTCACAGCTAGTTTaGGCCCATCAATTTCATAGAGAATCATGTATTAAA +
Preference number: 3 (lower is better)
Translates to: VLLSLSEDSQLV*AHQFHRESCIK
Trigger: TTTAATACATGATTCTCTATGAAATTGATGGGCTCAAACTAGCTGTGAATCTTCTGAGAGTGAAAGCAACAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR GCA 72 bp AATCTATTTACAATCATCTCAAACAAGTACAGCAGATaGGAAGTGGGACATCGTAAAAAGAAGTTGTCAAAA +
Preference number: 3 (lower is better)
Translates to: NLFTIISNKYSR*EVGHRKKKLSK
Trigger: TTTTGACAACTTCTTTTTACGATGTCCCACTTCGCATCTGCTGTACTTGTTTGAGATGATTGTAAATAGATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTAGTGACACACGGGGATaGGGCGGCAGGGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPSDTRG*GGREGG
Trigger: GCCACCCTCCCTGCCGCCTCATCCCCGTGTGTCACT...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCTCCGGTGTCCCGGCTaGCTGACGTGTGGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPLRCPG*LTCGRS
Trigger: AGACCGGCCACACGTCAGGCAGCCGGGACACCGGAG...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGACCTCGGCGTACACGGGCCTCCCGAGTACATGGTaGCGCCGCCGAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VAIPSTVSPTRLTSAYTGLPSTW*RRRGAP
Trigger: CGGAGCCCCTCGGCGGCGCCACCATGTACTCGGGAG...GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTGCCCCCGTAGAGGATaGAGGGCGGCTGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPCPRRG*RAAAAP
Trigger: GGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGACGGCTCCCGAGTACATaGTGGCGCCGCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGRLPST*WRRRGA
Trigger: AGCCCCTCGGCGGCGCCACCATGTACTCGGGAGCCG...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGGTGAAGGGCGGTGCTaGCAGAACACGGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPGEGRC*QNTAPA
Trigger: CGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCGGGAATGTTTGGTaGCTGGCGGGCCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTSGNVW*LAGRRV
Trigger: GACCCGGCGGCCCGCCAGTCACCAAACATTCCCGCT...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCAGCGGGAATGTTTGGTaGCTGGCGGGCCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: PADASAWPPALSRGTWVSSGNVW*LAGRRV
Trigger: GACCCGGCGGCCCGCCAGTCACCAAACATTCCCGCT...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGTGTCTCCCACGCGCTTaGCCTCGGCGTACACGGGCG +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASCLPRA*PRRTRA
Trigger: CGCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACA...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGATGTCTCCCACGCGCTTaGCCTCGGCGTACACGGGCG +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGCLPRA*PRRTRA
Trigger: CGCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACA...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGGTGGGCGTCCATGCTaGCCACCACGGCGGCAATGG +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGGGRPC*PPRRQW
Trigger: CCATTGCCGCCGTGGTGGGCAGCATGGACGCCCACC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGGGTGGGCGTCCATGCTaGCCACCACGGCGGCAATGG +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASGGRPC*PPRRQW
Trigger: CCATTGCCGCCGTGGTGGGCAGCATGGACGCCCACC...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGGGGAGACCCCCGACCTaGGGCTTGCTGCCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRGRPPT*GLLPLL
Trigger: CAGGAGGGGCAGCAAGCCGCAGGTCGGGGGTCTCCC...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGCTCCCGAGTACATGGTaGCGCCGCCGAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRLPSTW*RRRGAP
Trigger: CGGAGCCCCTCGGCGGCGCCACCATGTACTCGGGAG...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTCTGCACGCACTGCGTaGCCATCCCCAGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPSARTA*PSPAPC
Trigger: ACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCTCTTGCCGGGCAGGATaGCCACCACCAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PADASAWPPALSRGTWVSSCRAG*PPPAAG
Trigger: GCCTGCAGCTGGTGGTGGTCATCCTGCCCGGCAAGA...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGATCTTGCCGGGCAGGATaGCCACCACCAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGSCRAG*PPPAAG
Trigger: GCCTGCAGCTGGTGGTGGTCATCCTGCCCGGCAAGA...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGTCCTGCCGGTGCTGCTaGACGCGCACGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRSCRCC*TRTVAQ
Trigger: CTGCGCCACCGTGCGCGTGCAGCAGCACCGGCAGGA...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACTCCTGCCGGTGCTGCTaGACGCGCACGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHSCRCC*TRTVAQ
Trigger: CTGCGCCACCGTGCGCGTGCAGCAGCACCGGCAGGA...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGACCTGCGGACGCCTCTaGATGGCCACCGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRTCGRL*MATGPQ
Trigger: CTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGT...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCCGGGTGAAGGGCGGTaGTGGCAGAACACGGCACCT +
Preference number: 4 (lower is better)
Translates to: PADASAWPPALSRGTWVSPGEGR*WQNTAP
Trigger: AGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGG...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGTGCCCCCGTAGAGGATaGAGGGCGGCTGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRCPRRG*RAAAAP
Trigger: GGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCA...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGACCGGCGGCCTGCCCTaGGGCAGCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTTGGLP*GSRMLF
Trigger: GAACAACATCCTGCTGCCCCAGGGCAGGCCGCCGGT...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGAGCACCCCGATCTATaGAGTCGCTTGCACTGTGCC +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPEHPDL*SRLHCA
Trigger: GGCACAGTGCAAGCGACTTCATAGATCGGGGTGCTC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGGGCCCTGGATGGGCATaGCGGCGTCTCTCGAGATCT +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASGPGWA*RRLSRS
Trigger: AGATCTCGAGAGACGCCGGCATGCCCATCCAGGGCC...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTATGACCACCACCAGCTaGAGGCCCGCATACGTGTTC +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPMTTTS*RPAYVF
Trigger: GAACACGTATGCGGGCCTGCAGCTGGTGGTGGTCAT...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CGTCCAGGGCCTGGATCGTCTCAAAAGGGACGCTGGGCAGCCGCCCTGAAAGTGGGAACACCGGCGGCCTaGCCTGGGGCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: RPGPGSSQKGRWAAALKVGTPAA*PGAAGC
Trigger: ACATCCTGCTGCCCCAGGGCAGGCCGCCGGTGTTCC...CACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGACGATCCAGGCCCTGGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGGGGTGAGTGACGTCTaGTCCCAGAAAGATGACGGG +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPGVSDV*SQKDDG
Trigger: CCCGTCATCTTTCTGGGAGCAGACGTCACTCACCCC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACTGGGGTGGGCGTCCATaGTGCCCACCACGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHWGGRP*CPPRRQ
Trigger: TTGCCGCCGTGGTGGGCAGCATGGACGCCCACCCCA...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGTGGGGTGGGCGTCCATaGTGCCCACCACGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLWGGRP*CPPRRQ
Trigger: TTGCCGCCGTGGTGGGCAGCATGGACGCCCACCCCA...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGGTGAGCGTAGTATaGTGGCGCTGGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPQVSVV*WRWDGH
Trigger: GTGTCCATCCCAGCGCCAGCATACTACGCTCACCTG...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGGACCGCCTTGGCCAGTaGTTGGTGGTCTCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASDRLGQ*LVVSPV
Trigger: AACGGGCGAGACCACCAAGCACTGGCCAAGGCGGTC...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGACCTGCGGACGCCTCTaGATGGCCACCGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRTCGRL*MATGPQ
Trigger: CTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGT...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGGCAGAACACGGCACCTaGGGACGCCTCTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRAEHGT*GRLCMA
Trigger: GGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGC...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCCACCCCACCACAGTaGCGAGGTAAGTGTCGCGCA +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASPTPPQ*RGKCRA
Trigger: TGCGCGACACTTACCTCGGCACTGTGGTGGGGTGGG...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGACGCGTGCAGGAAGCTTaGGGTGGATCTGCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGRVQEA*GGSACC
Trigger: GCAGCACGCAGATCCACCGCAAGCTTCCTGCACGCG...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTCTCAAAAGGGACGCTaGGCAGCCGCCCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPSQKGR*AAALKV
Trigger: CACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGTCCGTGCACTGGCGCTaGGGGGCGAAGCACGCAATG +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRSVHWR*GAKHAM
Trigger: CATTGCGTGCTTCGCCCCCCAGCGCCAGTGCACGGA...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGATCTGCACGCACTGCGTaGCCATCCCCAGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGSARTA*PSPAPC
Trigger: ACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGA...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGGCGGACGCCTCTGCATaGCCACCGGCCCTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRADASA*PPALSR
Trigger: TCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGC...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGGGGTGCCACCAGAGCTaGGTCCTCAGACCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRGCHQS*VLRPQG
Trigger: TCCCTGGGGTCTGAGGACCCAGCTCTGGTGGCACCC...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGATGGCAAGTGCCTCATaGCCACGTCCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASMASAS*PRPGPG
Trigger: TCCAGGCCCTGGACGTGGTCATGAGGCACTTGCCAT...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCTTAGTTCAGGCCGGGTaGAGGGCGGTGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: PADASAWPPALSRGTWVSLVQAG*RAVLAE
Trigger: TTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAA...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGTTAGTTCAGGCCGGGTaGAGGGCGGTGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTLVQAG*RAVLAE
Trigger: TTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAA...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGGTCTGCCCGCTCTCCTaGTGCAGCGGGAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTVCPLS*CSGNVW
Trigger: CCAAACATTCCCGCTGCAGCAGGAGAGCGGGCAGAC...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGTTCATCTGCACGCACTaGGTGGCCATCCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASFICTH*VAIPST
Trigger: GGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTGTGGCGTGGTCCTCTaGACGTTCTTCATCTGCACG +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPCGVVL*TFFICT
Trigger: CGTGCAGATGAAGAACGTGCAGAGGACCACGCCACA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGGAATGTTTGGTGACTaGCGGGCCGCCGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGGMFGD*RAAGSH
Trigger: ATGTGACCCGGCGGCCCGCCAGTCACCAAACATTCC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGTCCGTGCACTGGCGCTaGGGGGCGAAGCACGCAATG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRSVHWR*GAKHAM
Trigger: CATTGCGTGCTTCGCCCCCCAGCGCCAGTGCACGGA...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGTGAAGGACTTCAGATaGACTTCCGTGCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPVKDFR*TSVHWR
Trigger: GCGCCAGTGCACGGAAGTCCATCTGAAGTCCTTCAC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GTTCTTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGAAGCACGGCTGGCCCTaGATGGGCATGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: VLHLHALRGHPQHRVSHAKHGWP*MGMPAS
Trigger: AGACGCCGGCATGCCCATCCAGGGCCAGCCGTGCTT...CGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAAGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGCCTTGGCCAGTGCTTaGTGGTCTCGCCCGTTACTC +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGALASA*WSRPLL
Trigger: GAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTCTCATGTTCGATGCTaGCTGTCACGGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPSHVRC*LSRKGW
Trigger: CCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAGCGGACGCCTCTGCATaGCCACCGGCCCTCAGTCGA +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKADASA*PPALSR
Trigger: TCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGC...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTTGGGCCGGCAGGCAGTaGGACACCCACGGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRWAGRQ*DTHGGP
Trigger: TGGGCCCCCGTGGGTGTCCCACTGCCTGCCGGCCCA...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGCCCCTTTCTGTCCATaGCCATTAGCACCTCCACCA +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPAPFCP*PLAPPP
Trigger: TGGTGGAGGTGCTAATGGCCATGGACAGAAAGGGGC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp AAGAACGGCCCATGCCCTCTGCTGGCCCTGCTATCCTaGGGCCTCCCAGGGCCAGGCAAGCTCCTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: KNGPCPLLALLS*GLPGPGKLLRC
Trigger: ACAGCGAAGGAGCTTGCCTGGCCCTGGGAGGCCCAAGGATAGCAGGGCCAGCAGAGGGCATGGGCCGTTCTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAGGGGCCCAAGCCTCTTaGGGTCGGTCCGCACAGAAC +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKGAQAS*GRSAQN
Trigger: GTTCTGTGCGGACCGACCTCAAGAGGCTTGGGCCCC...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGTGCTGCAGCTCCCATaGCTGAGTCGAGGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGVLQLP*LSRGAS
Trigger: GCTCGCCCCTCGACTCAGTCATGGGAGCTGCAGCAC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CGTCCAGGGCCTGGATCGTCTCAAAAGGGACGCTGGGCAGCCGCCCTGAAAGTGGGCCCTGGATGGGCATaGCGGCGTCTCTCGAGATCT +
Preference number: 4 (lower is better)
Translates to: RPGPGSSQKGRWAAALKVGPGWA*RRLSRS
Trigger: AGATCTCGAGAGACGCCGGCATGCCCATCCAGGGCC...CACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGACGATCCAGGCCCTGGACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGCCCCCTGCGCGTATTTaGAGAAGCACGGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLPPARI*RSTAGP
Trigger: AGGGCCAGCCGTGCTTCTGCAAATACGCGCAGGGGG...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCGGAACACCGGCGGCCTaGCCTGGGGCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: DRVRPPRLQTAWHHSLQVGTPAA*PGAAGC
Trigger: ACATCCTGCTGCCCCAGGGCAGGCCGCCGGTGTTCC...GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGGTGGGCGTCCATGCTaGCCACCACGGCGGCAATGG +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNGGRPC*PPRRQW
Trigger: CCATTGCCGCCGTGGTGGGCAGCATGGACGCCCACC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTTCCTGCCGGTGCTGCTaGACGCGCACGGTGGCGCAG +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVSCRCC*TRTVAQ
Trigger: CTGCGCCACCGTGCGCGTGCAGCAGCACCGGCAGGA...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGACCTCGGCGTACACGGGCTGCTTGTCCCCTGGATaGCAGCGTGACTACACAGGT +
Preference number: 4 (lower is better)
Translates to: VAIPSTVSPTRLTSAYTGCLSPG*QRDYTG
Trigger: ACCTGTGTAGTCACGCTGGCATCCAGGGGACAAGCA...GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGACGGCCCATGCCCTCTaGTGGCCCTGCTATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRTAHAL*WPCYPW
Trigger: CCAAGGATAGCAGGGCCAGCAGAGGGCATGGGCCGT...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTCCCCGACCTGCGGCTTaGTGCCCCTCCTGCTGCCTC +
Preference number: 4 (lower is better)
Translates to: RRPHAQQSHHQQLSTNLSPRPAA*CPSCCL
Trigger: GAGGCAGCAGGAGGGGCAGCAAGCCGCAGGTCGGGG...ACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGCAGCGTGGAGGTCACTaGCTGCTTCCAACAGTTCCC +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTQRGGH*LLPTVP
Trigger: GGGAACTGTTGGAAGCAGGCAGTGACCTCCACGCTG...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGGATGGCATGCCGTTATaGCGTCCCGTGCAGAGAACC +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTDGMPL*RPVQRT
Trigger: GGTTCTCTGCACGGGACGGCATAACGGCATGCCATC...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGATAGTGCGAAGGCCTaGTTGTCCCCCGCTCGTTCT +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGDSAKA*LSPARS
Trigger: AGAACGAGCGGGGGACAAGCAGGCCTTCGCACTATC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519980.5
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTCGGCTCCCGAGTACATaGTGGCGCCGCCGAGGGGCT +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRRLPST*WRRRGA
Trigger: AGCCCCTCGGCGGCGCCACCATGTACTCGGGAGCCG...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAGCTGCACGCGCACGGTaGCGCAGTAGCGATTGGGGT +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKAARAR*RSSDWG
Trigger: ACCCCAATCGCTACTGCGCCACCGTGCGCGTGCAGC...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGGCCAGCAACTCGTGGTaGAGAACCTGCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTASNSW*RTCWNW
Trigger: CCAGTTCCAGCAGGTTCTCCACCACGAGTTGCTGGC...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGTGAGCGTAGTATGCTaGCGCTGGGATGGACACGGA +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGVSVVC*RWDGHG
Trigger: TCCGTGTCCATCCCAGCGCCAGCATACTACGCTCAC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGGCCTTGGCCAGTGCTTaGTGGTCTCGCCCGTTACTC +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRALASA*WSRPLL
Trigger: GAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGC...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTGGTCTGAGTGTAGCTaGTCTCGTGAATCCCACTCG +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPWSECS*SRESHS
Trigger: CGAGTGGGATTCACGAGACCAGCTACACTCAGACCA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp ACCGCCTTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGGGTGAAGGGCGGTGCTaGCAGAACACGGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: TALASAWWSRPLLCPEVWGEGRC*QNTAPA
Trigger: CGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACC...CCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR TCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGGCTTCATCAGCTGAGTaGGTGACACACGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASASSAE*VTHGDE
Trigger: CTCATCCCCGTGTGTCACTCACTCAGCTGATGAAGC...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATACACAGGGCCGCTGCTaGATGCAGGCCTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNTQGRC*MQASAS
Trigger: GGAGGCAGAGGCCTGCATTCAGCAGCGGCCCTGTGT...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GTAGAGGATGGAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCAATACTGGGCCACCGTaGACTCCACCGTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: VEDGGRLQHPPSHVCHLINTGPP*TPPSAR
Trigger: GCGGGCAGACGGTGGAGTGCACGGTGGCCCAGTATT...GATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCTCTAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGACCTCGGCGTACACGGGCTTGCTAATCTCTTCTTaGCGATCGGGCGCCGACCTA +
Preference number: 4 (lower is better)
Translates to: VAIPSTVSPTRLTSAYTGLLISS*RSGADL
Trigger: TAGGTCGGCGCCCGATCGGCAAGAAGAGATTAGCAA...GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTTGGGGTGGGCGTCCATaGTGCCCACCACGGCGGCAA +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVWGGRP*CPPRRQ
Trigger: TTGCCGCCGTGGTGGGCAGCATGGACGCCCACCCCA...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTATCTCCTGCCGGTGCTaGTGCACGCGCACGGTGGCG +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRISCRC*CTRTVA
Trigger: CGCCACCGTGCGCGTGCAGCAGCACCGGCAGGAGAT...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGATCGTGGTGGAGAACCTaGTGGAACTGGCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGSWWRT*WNWPSE
Trigger: CTCTGAAGGCCAGTTCCAGCAGGTTCTCCACCACGA...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGAAGAGCCGGGTGTGGTaGCTCTTCTGCACCACGATG +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRKSRVW*LFCTTM
Trigger: CATCGTGGTGCAGAAGAGGCACCACACCCGGCTCTT...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTACCTGCGGACGCCTCTaGATGGCCACCGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LASAWWSRPLLCPEVWLPTCGRL*MATGPQ
Trigger: CTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGT...AGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCCGGGTGAAGGGCGGTaGTGGCAGAACACGGCACCT +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNPGEGR*WQNTAP
Trigger: AGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGG...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACGCAGCATTCCGGAGATaGGCGTGCAGGAAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHAAFRR*ACRKLA
Trigger: CGCAAGCTTCCTGCACGCGCATCTCCGGAATGCTGC...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGGGAGAGGCCATTCCTTaGCTTGCAGGATGGTGGGTT +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTGEAIP*LAGWWV
Trigger: AACCCACCATCCTGCAAGGCAAGGAATGGCCTCTCC...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGATGTCCCAGACGCCCTaGACAGGGGTCGCAATAGCT +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRMSQTP*TGVAIA
Trigger: AGCTATTGCGACCCCTGTCCAGGGCGTCTGGGACAT...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCACCGGCGGCCTGCCCTaGGGCAGCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: DRVRPPRLQTAWHHSLQVTGGLP*GSRMLF
Trigger: GAACAACATCCTGCTGCCCCAGGGCAGGCCGCCGGT...GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCAGAAGAGCCGGGTGTaGTGCCTCTTCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRQKSRV*CLFCTT
Trigger: CGTGGTGCAGAAGAGGCACCACACCCGGCTCTTCTG...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGCAGAAGAGCCGGGTGTaGTGCCTCTTCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLQKSRV*CLFCTT
Trigger: CGTGGTGCAGAAGAGGCACCACACCCGGCTCTTCTG...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGGCCTTGGCCAGTGCTTaGTGGTCTCGCCCGTTACTC +
Preference number: 4 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLALASA*WSRPLL
Trigger: GAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGC...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGGAACCTGGACCGCCTTaGCCAGTGCTTGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLEPGPP*PVLGGL
Trigger: GAGACCACCAAGCACTGGCCAAGGCGGTCCAGGTTC...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCTGTCACGGAAGGGCTaGCCATCTGTTGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASLSRKG*PSVGLS
Trigger: ACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAG...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGGTCGTATGGCTTGTCTaGGCCACTGGGATTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASVVWLV*ATGIVH
Trigger: GTGGACAATCCCAGTGGCCCAGACAAGCCATACGAC...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGTGCCAGCCTGAAGGATaGCATGCCGTTATGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRCQPEG*HAVMPS
Trigger: GGACGGCATAACGGCATGCCATCCTTCAGGCTGGCA...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAAGCCTTCGGACGCGGTaGAGAAGGAGCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTSLRTR*RRSGPR
Trigger: CCGTGGGCCGCTCCTTCTTCACCGCGTCCGAAGGCT...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCAGCGGGAATGTTTGGTaGCTGGCGGGCCGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESSGNVW*LAGRRV
Trigger: GACCCGGCGGCCCGCCAGTCACCAAACATTCCCGCT...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CGCAATAGCTTTATTCCTGCCCCCGTAGAGGATGGAGGGCGGCTGCAGCACCCGCGGCCAGGTCTTGTATaGTCTCCTGCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RNSFIPAPVEDGGRLQHPRPGLV*SPAGAA
Trigger: AGCAGCACCGGCAGGAGATCATACAAGACCTGGCCG...CGGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCAGGAATAAAGCTATTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR TCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTCAAGCTCCTTCGCTGTaGCCGACGGCCTCACGCCCA +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVQAPSL*PTASRP
Trigger: TGGGCGTGAGGCCGTCGGTCACAGCGAAGGAGCTTG...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGTTGCTAATCTCTTCTTaGCGATCGGGCGCCGACCTA +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTLLISS*RSGADL
Trigger: TAGGTCGGCGCCCGATCGGCAAGAAGAGATTAGCAA...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTAGGATGGAGGGCGGCTaGAGCACCCGCCCAGTCACG +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSRMEGG*STRPVT
Trigger: CGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCT...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGGATAGTGCGAAGGCCTaGTTGTCCCCTGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRDSAKA*LSPGCQ
Trigger: CTGGCATCCAGGGGACAAGCAGGCCTTCGCACTATC...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR GCA 90 bp AGCAACTCGTGGTGGAGAACCTGCTGGAACTGGCCTTCAGAGACACCGTCGCGGGACCGCCTTGGCCAGTaGTTGGTGGTCTCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SNSWWRTCWNWPSETPSRDRLGQ*LVVSPV
Trigger: AACGGGCGAGACCACCAAGCACTGGCCAAGGCGGTC...CCGCGACGGTGTCTCTGAAGGCCAGTTCCAGCAGGTTCTCCACCACGAGTTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTGCAGAACACGGCACCTaGGGACGCCTCTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVAEHGT*GRLCMA
Trigger: GGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGC...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTCCGGGTGAAGGGCGGTaGTGGCAGAACACGGCACCT +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVPGEGR*WQNTAP
Trigger: AGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGG...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACACTCCCGAGTACATGGTaGCGCCGCCGAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTLPSTW*RRRGAP
Trigger: CGGAGCCCCTCGGCGGCGCCACCATGTACTCGGGAG...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTTGCCCCCGTAGAGGATaGAGGGCGGCTGCAGCACCC +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSCPRRG*RAAAAP
Trigger: GGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCA...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGATGTCCCAGACGCCCTaGACAGGGGTCGCAATAGCT +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRMSQTP*TGVAIA
Trigger: AGCTATTGCGACCCCTGTCCAGGGCGTCTGGGACAT...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTACCGGCGGCCTGCCCTaGGGCAGCAGGATGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRTGGLP*GSRMLF
Trigger: GAACAACATCCTGCTGCCCCAGGGCAGGCCGCCGGT...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTAAGATGACGGGCTGCTaGAACACCGGCGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVKMTGC*NTGGLP
Trigger: GGGCAGGCCGCCGGTGTTCCAGCAGCCCGTCATCTT...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTGCTGCACGCGCACGGTaGCGCAGTAGCGATTGGGGT +
Preference number: 4 (lower is better)
Translates to: WPVLGGLARYSAQRYGFLAARAR*RSSDWG
Trigger: ACCCCAATCGCTACTGCGCCACCGTGCGCGTGCAGC...AAGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGTACAGGCCTCACGGATaGCCAGCAACTCGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRYRPHG*PATRGG
Trigger: TCCACCACGAGTTGCTGGCCATCCGTGAGGCCTGTA...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGACACACACACAGACTaGTCTGGGGCTGAAAAACTT +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPDTHTD*SGAEKL
Trigger: AAGTTTTTCAGCCCCAGACCAGTCTGTGTGTGTGTC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGACTTGGTCAGGGTATaGGAGAAACCACACGACTGG +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGDLVRV*EKPHDW
Trigger: CCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CGCAATAGCTTTATTCCTGCCCCCGTAGAGGATGGAGGGCGGCTGCAGCACCCGCAATGGCCCACACCTTaGTCTCGATGCCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RNSFIPAPVEDGGRLQHPQWPTP*SRCPCG
Trigger: TCCACACGGGCATCGAGATCAAGGTGTGGGCCATTG...CGGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCAGGAATAAAGCTATTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR TCA 90 bp GACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCCGGCCAGGTCTTGTATaGTCTCCTGCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: DRVRPPRLQTAWHHSLQVRPGLV*SPAGAA
Trigger: AGCAGCACCGGCAGGAGATCATACAAGACCTGGCCG...GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGTCGAGGAACTTGGGTaGGCCACGCCAGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSVEELG*ATPGAH
Trigger: GTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGAC...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGATGAGCAGCCAACATaGGAACGGGGCCACCTCCAA +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGDEQPT*ERGHLQ
Trigger: TTGGAGGTGGCCCCGTTCTCATGTTGGCTGCTCATC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATAAGGGGGCTGGGGGCTaGGGTGAGGACTTAACCCTT +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNKGAGG*GEDLTL
Trigger: AAGGGTTAAGTCCTCACCTCAGCCCCCAGCCCCCTT...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGACCACCAGGCTTTGCTaGTGGTCATGGTCAATGCAT +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTTTRLC*WSWSMH
Trigger: ATGCATTGACCATGACCATCAGCAAAGCCTGGTGGT...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACAAGGATGGAGGGCGGCTaGAGCACCCGCCCAGTCACG +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTRMEGG*STRPVT
Trigger: CGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCT...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACATGCCCGTGTGGAACTaGTTGTTCCGCATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHMPVWN*LFRMSQ
Trigger: CTGGGACATGCGGAACAAGCAGTTCCACACGGGCAT...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACTGTGGCGTGGTCCTCTaGACGTTCTTCATCTGCACG +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHCGVVL*TFFICT
Trigger: CGTGCAGATGAAGAACGTGCAGAGGACCACGCCACA...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TCCCCTGGATGCCAGCGTGACTACACAGGTAGAAGTCGAACTCGGTGGGGTGGGAGAAAGATGACGGGCTaGTGGAACACCGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: SPGCQRDYTGRSRTRWGGRKMTG*WNTGGL
Trigger: CAGGCCGCCGGTGTTCCAGCAGCCCGTCATCTTTCT...CCCACCCCACCGAGTTCGACTTCTACCTGTGTAGTCACGCTGGCATCCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGTCGTGGTGGAGAACCTaGTGGAACTGGCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRSWWRT*WNWPSE
Trigger: CTCTGAAGGCCAGTTCCAGCAGGTTCTCCACCACGA...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ACCGCCTTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGAAGAGCCGGGTGTGGTaGCTCTTCTGCACCACGATG +
Preference number: 4 (lower is better)
Translates to: TALASAWWSRPLLCPEVWKSRVW*LFCTTM
Trigger: CATCGTGGTGCAGAAGAGGCACCACACCCGGCTCTT...CCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGGCTCGTTCTTGTCAGTaGAGAAGAGCCGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRARSCQ*RRAGCG
Trigger: ACCACACCCGGCTCTTCTGCACTGACAAGAACGAGC...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCCCATGGGTACACGCTaGACAGTCTCCACGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNPMGTR*TVSTGE
Trigger: TTCCCCCGTGGAGACTGTGCAGCGTGTACCCATGGG...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTCAGGGAGCCCAGGGCTaGAGGCCATCGCTTAGACAC +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVQGAQG*RPSLRH
Trigger: GTGTCTAAGCGATGGCCTGCAGCCCTGGGCTCCCTG...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGTAGTCCTACTTTTCTaGCAGCCCAGTCTGTCTCAG +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGVVLLF*QPSLSQ
Trigger: CTGAGACAGACTGGGCTGGCAGAAAAGTAGGACTAC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGAAAGTCGGGTCTAGGTaGAGGCTTGAAGGCATATCC +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASKVGSR*RLEGIS
Trigger: GGATATGCCTTCAAGCCTCCACCTAGACCCGACTTT...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGGAATGTTTGGTGACTaGCGGGCCGCCGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNGMFGD*RAAGSH
Trigger: ATGTGACCCGGCGGCCCGCCAGTCACCAAACATTCC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCAAGCACGGCTGGCCCTaGATGGGCATGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESKHGWP*MGMPAS
Trigger: AGACGCCGGCATGCCCATCCAGGGCCAGCCGTGCTT...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACACAGGGTCTGTGGCGTaGTCCTCTGCACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHTGSVA*SSARSS
Trigger: TGAAGAACGTGCAGAGGACCACGCCACAGACCCTGT...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTAAGATGACGGGCTGCTaGAACACCGGCGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSKMTGC*NTGGLP
Trigger: GGGCAGGCCGCCGGTGTTCCAGCAGCCCGTCATCTT...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CGTCCAGGGCCTGGATCGTCTCAAAAGGGACGCTGGGCAGCCGCCCTGAAAGTGAGAACCTGCTGGAACTaGCCTTCAGAGACACCGTCG +
Preference number: 4 (lower is better)
Translates to: RPGPGSSQKGRWAAALKVRTCWN*PSETPS
Trigger: CGACGGTGTCTCTGAAGGCCAGTTCCAGCAGGTTCT...CACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGACGATCCAGGCCCTGGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACATGGCCAGCAACTCGTaGTGGAGAACCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHMASNS*WRTCWN
Trigger: GTTCCAGCAGGTTCTCCACCACGAGTTGCTGGCCAT...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGTAGTATGCTGGCGCTaGGATGGACACGGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGVVCWR*DGHGAC
Trigger: ACACGCTCCGTGTCCATCCCAGCGCCAGCATACTAC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTAAGCAGCCTGTACCCTaGGCCGGCAGGCAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFKQPVP*AGRQWD
Trigger: GTCCCACTGCCTGCCGGCCCAGGGTACAGGCTGCTT...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCCAAACGCGAAGATGGTaGGAGGGCCCAGCGCAGCAT +
Preference number: 4 (lower is better)
Translates to: DRVRPPRLQTAWHHSLQVQTRRW*EGPAQH
Trigger: ATGCTGCGCTGGGCCCTCCCACCATCTTCGCGTTTG...GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAATCTCCTGCAATCCTaGCAGAGGTGGACTTGGTCA +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTNLLQS*QRWTWS
Trigger: TGACCAAGTCCACCTCTGCCAGGATTGCAGGAGATT...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp ATGGAGACAGAGGAAGGCCTTGGCACCACCAGCTTCTaGGGACAGAGGGACCTGCCGTCTCCCACCCAAGAC +
Preference number: 4 (lower is better)
Translates to: METEEGLGTTSF*GQRDLPSPTQD
Trigger: GTCTTGGGTGGGAGACGGCAGGTCCCTCTGTCCCAAGAAGCTGGTGGTGCCAAGGCCTTCCTCTGTCTCCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAAATTGGCCTGTAATTTaGTTGTTCTCCCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGNWPVI*LFSRRS
Trigger: GGACCTCCGGGAGAACAATCAAATTACAGGCCAATT...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR TCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTATGGCAAGTGCCTCATaGCCACGTCCAGGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRMASAS*PRPGPG
Trigger: TCCAGGCCCTGGACGTGGTCATGAGGCACTTGCCAT...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTAGCCTTCGGACGCGGTaGAGAAGGAGCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICSLRTR*RRSGPR
Trigger: CCGTGGGCCGCTCCTTCTTCACCGCGTCCGAAGGCT...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACAAGCCTTCGGACGCGGTaGAGAAGGAGCGGCCCACGG +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTSLRTR*RRSGPR
Trigger: CCGTGGGCCGCTCCTTCTTCACCGCGTCCGAAGGCT...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGAGTCTTTTTCTAGCTTaGTACAGGCCTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASSLFLA*YRPHGW
Trigger: CCATCCGTGAGGCCTGTATCAAGCTAGAAAAAGACT...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTCGCAGAGTGTCTTGGTaGACCTGGACCGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFRRVSW*TWTALA
Trigger: GGCCAAGGCGGTCCAGGTTCACCAAGACACTCTGCG...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACACGCAGAGTGTCTTGGTaGACCTGGACCGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTRRVSW*TWTALA
Trigger: GGCCAAGGCGGTCCAGGTTCACCAAGACACTCTGCG...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCCGCAGAGTGTCTTGGTaGACCTGGACCGCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSRRVSW*TWTALA
Trigger: GGCCAAGGCGGTCCAGGTTCACCAAGACACTCTGCG...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGCACACGGAGAGGAGTaGGTCCCCACACATCAATGT +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGAHGEE*VPTHQC
Trigger: ACATTGATGTGTGGGGACTCACTCCTCTCCGTGTGC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTGCCCTGGCCATCCCTaGAGTACCGCACGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASCPGHP*STARRR
Trigger: CCTCCTGCGTGCGGTACTTCAGGGATGGCCAGGGCA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTGGTGTCCCGGCTGCCTaGCGTGTGGCCGGTCTATCC +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICGVPAA*RVAGLS
Trigger: GGATAGACCGGCCACACGTCAGGCAGCCGGGACACC...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCTCGATTACTGGCTGTaGCTTGTAAAACGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: PADASAWPPALSRGTWVSLDYWL*LVKRCC
Trigger: GCAACAGCGTTTTACAAGGCACAGCCAGTAATCGAG...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTGTCTGCCCGCTCTCCTaGTGCAGCGGGAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: WPVLGGLARYSAQRYGFLVCPLS*CSGNVW
Trigger: CCAAACATTCCCGCTGCAGCAGGAGAGCGGGCAGAC...AAGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAAATACTGGGCCACCGTaGACTCCACCGTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTNTGPP*TPPSAR
Trigger: GCGGGCAGACGGTGGAGTGCACGGTGGCCCAGTATT...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCCCCCTGCGCGTATTTaGAGAAGCACGGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESPPARI*RSTAGP
Trigger: AGGGCCAGCCGTGCTTCTGCAAATACGCGCAGGGGG...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTATCTCCTGCCGGTGCTaGTGCACGCGCACGGTGGCG +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICISCRC*CTRTVA
Trigger: CGCCACCGTGCGCGTGCAGCAGCACCGGCAGGAGAT...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTCAGCACTGTCATGTTCCTTAATCTCCTGCCGGTGCTaGTGCACGCGCACGGTGGCG +
Preference number: 4 (lower is better)
Translates to: RPLLCPEVWLPSALSCSLISCRC*CTRTVA
Trigger: CGCCACCGTGCGCGTGCAGCAGCACCGGCAGGAGAT...TAAGGAACATGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAGTAACGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACGTGTGGTGCCTCTTCTaGACCACGATGAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHVWCLF*TTMKVI
Trigger: GATCACCTTCATCGTGGTGCAGAAGAGGCACCACAC...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCGACCGCCTTGGCCAGTaGTTGGTGGTCTCGCCCGTT +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESDRLGQ*LVVSPV
Trigger: AACGGGCGAGACCACCAAGCACTGGCCAAGGCGGTC...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTCCCACCTTCTGCCACTaGTCCTTAGTTCAGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RRPHAQQSHHQQLSTNLSPTFCH*SLVQAG
Trigger: CCCGGCCTGAACTAAGGAGCAGTGGCAGAAGGTGGG...ACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACAGCCCTCTGCTGGCCCTaGTATCCTTGGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTALCWP*YPWASQ
Trigger: CTGGGAGGCCCAAGGATAGCAGGGCCAGCAGAGGGC...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGACTTCCTGCAAGTCTaGATCAGACGGTCCACTGCG +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGDFLQV*IRRSTA
Trigger: CGCAGTGGACCGTCTGATGCAGACTTGCAGGAAGTC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCACGCAATGAGACCGAGTaGGTCCCCCGCGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIARNETE*VPRGSR
Trigger: TCTGGAGCCGCGGGGGACGCACTCGGTCTCATTGCG...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTCCACAGTGCTCCCTCTaGAGCCGTTGCCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRPQCSL*SRCLCG
Trigger: TCCACAGAGGCAACGGCTGCAGAGGGAGCACTGTGG...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAAGCACGGCTGGCCCTaGATGGGCATGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECKHGWP*MGMPAS
Trigger: AGACGCCGGCATGCCCATCCAGGGCCAGCCGTGCTT...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCTCTGCACGCACTGCGTaGCCATCCCCAGCACCGTGT +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESSARTA*PSPAPC
Trigger: ACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGA...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGCCAGCAACTCGTGGTaGAGAACCTGCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNASNSW*RTCWNW
Trigger: CCAGTTCCAGCAGGTTCTCCACCACGAGTTGCTGGC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGCACAGTCGTGCCTGCTaGAATGTTTCCACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRHSRAC*NVSTFP
Trigger: GGGAAAAGTGGAAACATTCCAGCAGGCACGACTGTG...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGTGAGCGTAGTATGCTaGCGCTGGGATGGACACGGA +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNVSVVC*RWDGHG
Trigger: TCCGTGTCCATCCCAGCGCCAGCATACTACGCTCAC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GTAGAGGATGGAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCCTGTCACGGAAGGGCTaGCCATCTGTTGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: VEDGGRLQHPPSHVCHLILSRKG*PSVGLS
Trigger: ACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAG...GATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCTCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTCTCAGTCGAGGAACTTaGGTGAGCCACGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSLSRGT*VSHARG
Trigger: GCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAG...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTGGTGAAGGGCGGTGCTaGCAGAACACGGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECGEGRC*QNTAPA
Trigger: CGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACC...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTGGGAAGGGCCACCTCTaGCTTTCACGTGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVGKGHL*LSREQG
Trigger: GCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCC...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGACTCCTCGGTCACTTTaGGGAAGGGCTTCAAACATA +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTTPRSL*GRASNI
Trigger: TATGTTTGAAGCCCTTCCCCAAAGTGACCGAGGAGT...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTCAGATGCCTCCCGTCTaGACTGTCCCAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSQMPPV*TVPGWV
Trigger: CACCCAGCCTGGGACAGTCCAGACGGGAGGCATCTG...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTTCACAAACGCGAAGATaGTGGGAGGGCCCAGCGCAG +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVSQTRR*WEGPAQ
Trigger: CTGCGCTGGGCCCTCCCACCATCTTCGCGTTTGTGA...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGGAGAAACCACACGACTaGAACCAAGTGTTTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASEKPHD*NQVFSA
Trigger: TGCGGAAAACACTTGGTTCCAGTCGTGTGGTTTCTC...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTACTCGGTGGGGTGGGTaGTTTTCGTGTCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: RRPHAQQSHHQQLSTNLSTRWGG*FSCPQS
Trigger: CGACTGTGGACACGAAAATCACCCACCCCACCGAGT...ACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCAGTCGAGGAACTTGGGTaGGCCACGCCAGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSVEELG*ATPGAH
Trigger: GTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGAC...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTCATCAGCTGAGTGAGTaGCACACGGGGATGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSHQLSE*HTGMRR
Trigger: CCGCCTCATCCCCGTGTGTCACTCACTCAGCTGATG...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGGGAACTGAACTGACATaGTCTGTTCTAATGGGCACT +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTGTELT*SVLMGT
Trigger: AGTGCCCATTAGAACAGATCATGTCAGTTCAGTTCC...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGCAGCTCCCATGACTaGGTCGAGGGGCGAGCGGCT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICCSSHD*VEGRAA
Trigger: AGCCGCTCGCCCCTCGACTCAGTCATGGGAGCTGCA...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTAAAGTGCAAGAATGCTaGTCATCTTATGCAGCATAC +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPKVQEC*SSYAAY
Trigger: GTATGCTGCATAAGATGATCAGCATTCTTGCACTTT...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGCATCGTGTAACGCCTaGAAGCTCACGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRASCNA*KLTQDT
Trigger: GGTGTCCTGCGTGAGCTTGCAGGCGTTACACGATGC...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTGTCTGCCCGCTCTCCTaGTGCAGCGGGAATGTTTGG +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFVCPLS*CSGNVW
Trigger: CCAAACATTCCCGCTGCAGCAGGAGAGCGGGCAGAC...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TCCCCTGGATGCCAGCGTGACTACACAGGTAGAAGTCGAACTCGGTGGGGTGGGATGCCCGTGTGGAACTaGTTGTTCCGCATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SPGCQRDYTGRSRTRWGGMPVWN*LFRMSQ
Trigger: CTGGGACATGCGGAACAAGCAGTTCCACACGGGCAT...CCCACCCCACCGAGTTCGACTTCTACCTGTGTAGTCACGCTGGCATCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGAGATCTTTCTGAGCTaGTCTGTGAAGGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGEIFLS*SVKDFR
Trigger: TCTGAAGTCCTTCACAGAGCAGCTCAGAAAGATCTC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACAGGCCCTGGATGGGCATaGCGGCGTCTCTCGAGATCT +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTGPGWA*RRLSRS
Trigger: AGATCTCGAGAGACGCCGGCATGCCCATCCAGGGCC...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TCCCCTGGATGCCAGCGTGACTACACAGGTAGAAGTCGAACTCGGTGGGGTGGGTGTGGCGTGGTCCTCTaGACGTTCTTCATCTGCACG +
Preference number: 4 (lower is better)
Translates to: SPGCQRDYTGRSRTRWGGCGVVL*TFFICT
Trigger: CGTGCAGATGAAGAACGTGCAGAGGACCACGCCACA...CCCACCCCACCGAGTTCGACTTCTACCTGTGTAGTCACGCTGGCATCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGGGGTGAGTGACGTCTaGTCCCAGAAAGATGACGGG +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRGVSDV*SQKDDG
Trigger: CCCGTCATCTTTCTGGGAGCAGACGTCACTCACCCC...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGCTCGTTCTTGTCAGTaGAGAAGAGCCGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNARSCQ*RRAGCG
Trigger: ACCACACCCGGCTCTTCTGCACTGACAAGAACGAGC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TGCCTCATGACCACGTCCAGGGCCTGGATCGTCTCAAAAGGGACGCTGGGCAGCTCGTGTCCACAGTCGTaGCTGCTGGAATGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: CLMTTSRAWIVSKGTLGSSCPQS*LLECFH
Trigger: GTGGAAACATTCCAGCAGGCACGACTGTGGACACGA...GCTGCCCAGCGTCCCTTTTGAGACGATCCAGGCCCTGGACGTGGTCATGAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCTGGACACGGAGCGTGTaGAGCGCACGTAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESWTRSV*SARRCD
Trigger: GTCACACCTACGTGCGCTGCACACGCTCCGTGTCCA...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTACAGGACGGTGGCTTTaGGTCACCGAAGGGCTCACA +
Preference number: 4 (lower is better)
Translates to: RRPHAQQSHHQQLSTNLSTGRWL*VTEGLT
Trigger: TGTGAGCCCTTCGGTGACGCAAAGCCACCGTCCTGT...ACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAGTGGAGGTCACTGCCTaGTTCCAACAGTTCCCTCTT +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKVEVTA*FQQFPL
Trigger: AAGAGGGAACTGTTGGAAGCAGGCAGTGACCTCCAC...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGCACGGCAGCTAGAGTaGAACTCCTCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNARQLE*NSSVTL
Trigger: CAAAGTGACCGAGGAGTTGCACTCTAGCTGCCGTGC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTTGCCCTGCTGGTTGGTaGTGTGGGGTGTTCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RRPHAQQSHHQQLSTNLSCPAGW*CGVFLG
Trigger: TCCCAAGAACACCCCACAGCACCAACCAGCAGGGCA...ACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTACCACGTCCAGGGCCTaGATCGTCTCAAAAGGGACG +
Preference number: 4 (lower is better)
Translates to: LASAWWSRPLLCPEVWLPTTSRA*IVSKGT
Trigger: CGTCCCTTTTGAGACGATCCAGGCCCTGGACGTGGT...AGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTCCGTGCACTGGCGCTaGGGGGCGAAGCACGCAATG +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICSVHWR*GAKHAM
Trigger: CATTGCGTGCTTCGCCCCCCAGCGCCAGTGCACGGA...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTTACAGGCCTCACGGATaGCCAGCAACTCGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRYRPHG*PATRGG
Trigger: TCCACCACGAGTTGCTGGCCATCCGTGAGGCCTGTA...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACACAGAAGAGCCGGGTGTaGTGCCTCTTCTGCACCACG +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTQKSRV*CLFCTT
Trigger: CGTGGTGCAGAAGAGGCACCACACCCGGCTCTTCTG...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCACAGTCGTGCCTGCTaGAATGTTTCCACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHHSRAC*NVSTFP
Trigger: GGGAAAAGTGGAAACATTCCAGCAGGCACGACTGTG...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR CCA 90 bp TTGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTTGGCCAGTGCTTGGTaGTCTCGCCCGTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: LASAWWSRPLLCPEVWLPLASAW*SRPLLC
Trigger: GCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA...AGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGGGCTGGCCATCTGTTaGTCTGAGTGTAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNGLAIC*SECSWS
Trigger: AGACCAGCTACACTCAGACCAACAGATGGCCAGCCC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGCAACTCGTGGTGGAGAACCTGCTGGAACTGGCCTTCAGAGACACCGTCGCGGGGGCTGGCCATCTGTTaGTCTGAGTGTAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SNSWWRTCWNWPSETPSRGLAIC*SECSWS
Trigger: AGACCAGCTACACTCAGACCAACAGATGGCCAGCCC...CCGCGACGGTGTCTCTGAAGGCCAGTTCCAGCAGGTTCTCCACCACGAGTTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCTGTCACGGAAGGGCTaGCCATCTGTTGGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNLSRKG*PSVGLS
Trigger: ACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAG...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGCAACTCGTGGTGGAGAACCTGCTGGAACTGGCCTTCAGAGACACCGTCGCGGTCTCATGTTCGATGCTaGCTGTCACGGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SNSWWRTCWNWPSETPSRSHVRC*LSRKGW
Trigger: CCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGA...CCGCGACGGTGTCTCTGAAGGCCAGTTCCAGCAGGTTCTCCACCACGAGTTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGATCCAAGTTTGAAATCTaGGACGGAAGGCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGSKFEI*DGRHSG
Trigger: TCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGA...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGACACACGAGCATCGCCTaGAAATCAACTTTAGTGACA +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGHTSIA*KSTLVT
Trigger: TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTG...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATTGGCAAACCCAAGTCTaGGGCCCCAAATGCAAACCC +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNWQTQV*GPKCKP
Trigger: GGGTTTGCATTTGGGGCCCCAGACTTGGGTTTGCCA...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGCTCAAACAAACAGCGTaGAGGTCACTGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGLKQTA*RSLPAS
Trigger: GGAAGCAGGCAGTGACCTCCACGCTGTTTGTTTGAG...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGTTTCTGACAGCAAAGTaGTTAATCACAGGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTFLTAK*LITGRG
Trigger: ACCCCTCCCTGTGATTAACCACTTTGCTGTCAGAAA...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCCGCACAGAACAGCGTaGCGGCAGAATTACAAAACA +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHPHRTA*RQNYKT
Trigger: TGTTTTGTAATTCTGCCGCCACGCTGTTCTGTGCGG...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCGCACCACCAGCTTCTTaGGACAGAGGGACCTGCCGT +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESAPPAS*DRGTCR
Trigger: ACGGCAGGTCCCTCTGTCCCAAGAAGCTGGTGGTGC...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCGGCTCCAGACTGCATaGCATCACAGTTTACAAGTC +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHRLQTA*HHSLQV
Trigger: GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCG...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGCAAGACATGGTCACATaGTTCCACTGTACAGGTAGA +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTQDMVT*FHCTGR
Trigger: TCTACCTGTACAGTGGAACCATGTGACCATGTCTTG...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTCAATGGCCCACACCTTaGTCTCGATGCCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFQWPTP*SRCPCG
Trigger: TCCACACGGGCATCGAGATCAAGGTGTGGGCCATTG...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTACTTGTAGAACTGGATaGGGAGCTCGCGGACCATGG +
Preference number: 4 (lower is better)
Translates to: WPVLGGLARYSAQRYGFLTCRTG*GARGPW
Trigger: CCATGGTCCGCGAGCTCCTCATCCAGTTCTACAAGT...AAGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR TCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGAGTCTTTTTCTAGCTTaGTACAGGCCTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRSLFLA*YRPHGW
Trigger: CCATCCGTGAGGCCTGTATCAAGCTAGAAAAAGACT...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAAGGCTCGCCTCCTTCCTaGCGCCTCTACACGGAACAT +
Preference number: 4 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQGSPPS*RLYTEH
Trigger: ATGTTCCGTGTAGAGGCGTCAGGAAGGAGGCGAGCC...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTATCCCCCAGACAGCCTaGCGCAGGTGGAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFIPQTA*RRWKKH
Trigger: GTGTTTCTTCCACCTGCGTCAGGCTGTCTGGGGGAT...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAACCCCAGGCACCCACATaGTCAGACGATCAGATGCCG +
Preference number: 4 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQPQAPT*SDDQMP
Trigger: CGGCATCTGATCGTCTGATCATGTGGGTGCCTGGGG...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTAGGCTCCTGCCAGCCTaGAGGATGGCATGCCGTTAT +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSRLLPA*RMACRY
Trigger: ATAACGGCATGCCATCCTTCAGGCTGGCAGGAGCCT...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGACATGACAGTCGGTGTTaGAGCACCTTTGTGATTTTA +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGHDSRC*STFVIL
Trigger: TAAAATCACAAAGGTGCTTCAACACCGACTGTCATG...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGATCTGTGTTTTAAAGTaGTGGACCATGTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASICVLK*WTMCST
Trigger: CGTGGAACACATGGTCCAGCACTTTAAAACACAGAT...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGCATCGTGTAACGCCTaGAAGCTCACGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSASCNA*KLTQDT
Trigger: GGTGTCCTGCGTGAGCTTGCAGGCGTTACACGATGC...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAAAATACTGGGCCACCGTaGACTCCACCGTCTGCCCGC +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLENTGPP*TPPSAR
Trigger: GCGGGCAGACGGTGGAGTGCACGGTGGCCCAGTATT...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTATCTGTGTTGAAACTTaGACTTCGCATCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPICVET*TSHQFA
Trigger: AGCAAATTGATGCGAAGTGCAAGTTTCAACACAGAT...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTATGCCCGTGTGGAACTaGTTGTTCCGCATGTCCCAG +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRMPVWN*LFRMSQ
Trigger: CTGGGACATGCGGAACAAGCAGTTCCACACGGGCAT...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCATGACCACCACCAGCTaGAGGCCCGCATACGTGTTC +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSMTTTS*RPAYVF
Trigger: GAACACGTATGCGGGCCTGCAGCTGGTGGTGGTCAT...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCGGAACACCGGCGGCCTaGCCTGGGGCAGCAGGATGT +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAGTPAA*PGAAGC
Trigger: ACATCCTGCTGCCCCAGGGCAGGCCGCCGGTGTTCC...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACGTCCACAGTCGTGCCTaGTGGAATGTTTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHVHSRA*WNVSTF
Trigger: AAAAGTGGAAACATTCCAGCAGGCACGACTGTGGAC...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR GCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACACAGGTGAGCGTAGTATaGTGGCGCTGGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTQVSVV*WRWDGH
Trigger: GTGTCCATCCCAGCGCCAGCATACTACGCTCACCTG...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTGTTCTCATACAGGTCTaGAGTTCAAAATCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPVLIQV*SSKSKF
Trigger: AAACTTGGATTTTGAACTGCAGACCTGTATGAGAAC...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCATCCCTTTGTCATTaGCGCCAATATCCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKSSLCH*RQYPGE
Trigger: CTCGCCTGGATATTGGCGGCAATGACAAAGGGATGA...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAAGACTGCAACGAGTCTaGTTAGGACTAAATCATCAG +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGRLQRV*LGLNHQ
Trigger: CTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCT...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACAAGCAGGCGGAGCAGATaGCTCCCGTCTGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTSRRSR*LPSGLS
Trigger: GGACAGTCCAGACGGGAGGCATCTGCTCCGCCTGCT...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAATCTATGAAGTCGCTTaGACTGTGCCCTGCTGGTTG +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKIYEVA*TVPCWL
Trigger: CAACCAGCAGGGCACAGTGCAAGCGACTTCATAGAT...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATGGGACAGAGGGACCTaGCGTCTCCCACCCAAGACT +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTWDRGT*RLPPKT
Trigger: AGTCTTGGGTGGGAGACGGCAGGTCCCTCTGTCCCA...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCAATCGGAAGGGGCATaGCTGTGTATAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHQSEGA*LCIDSS
Trigger: GGAAGAATCTATACACAGCCATGCCCCTTCCGATTG...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCACCACGTCCAGGGCCTaGATCGTCTCAAAAGGGACG +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESTTSRA*IVSKGT
Trigger: CGTCCCTTTTGAGACGATCCAGGCCCTGGACGTGGT...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTACAGGGTCTGTGGCGTaGTCCTCTGCACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRTGSVA*SSARSS
Trigger: TGAAGAACGTGCAGAGGACCACGCCACAGACCCTGT...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGTTGGACAGGGTCTGTaGCGTGGTCCTCTGCACGTT +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSVGQGL*RGPLHV
Trigger: AACGTGCAGAGGACCACGCCACAGACCCTGTCCAAC...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCATGGCGCAGTAGCGATTaGGGTGGGCGTCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSWRSSD*GGRPCC
Trigger: GCAGCATGGACGCCCACCCCAATCGCTACTGCGCCA...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTGCTGCACGCGCACGGTaGCGCAGTAGCGATTGGGGT +
Preference number: 4 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSAARAR*RSSDWG
Trigger: ACCCCAATCGCTACTGCGCCACCGTGCGCGTGCAGC...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACATACAGGCCTCACGGATaGCCAGCAACTCGTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTYRPHG*PATRGG
Trigger: TCCACCACGAGTTGCTGGCCATCCGTGAGGCCTGTA...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATTCGAACTCGGTGGGGTaGGTGATTTTCGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNSNSVG*VIFVST
Trigger: TGTGGACACGAAAATCACCCACCCCACCGAGTTCGA...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR CCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCGTAGTATGCTGGCGCTaGGATGGACACGGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESVVCWR*DGHGAC
Trigger: ACACGCTCCGTGTCCATCCCAGCGCCAGCATACTAC...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCGTGAGCGTAGTATGCTaGCGCTGGGATGGACACGGA +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESVSVVC*RWDGHG
Trigger: TCCGTGTCCATCCCAGCGCCAGCATACTACGCTCAC...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTTCCTTATCCACCAGGTaGTACCTGGCCCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECSLSTR*YLARKA
Trigger: GGCCTTCCGGGCCAGGTACCACCTGGTGGATAAGGA...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCACTCAGTCGAGGAACTTaGGTGAGCCACGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSLSRGT*VSHARG
Trigger: GCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAG...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCAACAGTTTCTAGATTaGCAAACCCAAGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHQQFLD*QTQVWG
Trigger: GCCCCAGACTTGGGTTTGCCAATCTAGAAACTGTTG...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCACCGCACGCAGGAGGTaGCAGCAGGCCCACAAATCT +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASTARRR*QQAHKS
Trigger: AGATTTGTGGGCCTGCTGCCACCTCCTGCGTGCGGT...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCATGAGCGTGAGAGATaGGTCAGAGAGAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNHERER*VRERSQ
Trigger: CTGTGACCTCTCTCTGACCCATCTCTCACGCTCATG...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCAAGGAGGGGCTGCCCGTaGGTCACAGTATGGCACACA +
Preference number: 4 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIARRGCP*VTVWHT
Trigger: TGTGTGCCATACTGTGACCCACGGGCAGCCCCTCCT...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCGCAGGAAGCTTGCGGTaGATCTGCGTGCTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASAGSLR*ICVLQL
Trigger: GAGCTGCAGCACGCAGATCCACCGCAAGCTTCCTGC...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTCTTGACAGGGACAGGTaGTTTCTCAGGCCATTGGCC +
Preference number: 4 (lower is better)
Translates to: RRPHAQQSHHQQLSTNLSLDRDR*FLRPLA
Trigger: GGCCAATGGCCTGAGAAACCACCTGTCCCTGTCAAG...ACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCTGCCTTGCAGGATGGTaGGTTGGGGGAGAAAGAGGG +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESCLAGW*VGGERG
Trigger: CCCTCTTTCTCCCCCAACCCACCATCCTGCAAGGCA...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTGAAGAGGAACTGGGATaGCAGCCACAGTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFEEELG*QPQCSL
Trigger: GAGGGAGCACTGTGGCTGCCATCCCAGTTCCTCTTC...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GTTCTTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCGTATGGATCTGTGTTaGAACTTGCACTTCGCATCA +
Preference number: 4 (lower is better)
Translates to: VLHLHALRGHPQHRVSHARMDLC*NLHFAS
Trigger: TGATGCGAAGTGCAAGTTTCAACACAGATCCATACG...CGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAAGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR TCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTCGGCCAGGTCTTGTATaGTCTCCTGCCGGTGCTGCT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICRPGLV*SPAGAA
Trigger: AGCAGCACCGGCAGGAGATCATACAAGACCTGGCCG...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCACTTGTAGAACTGGATaGGGAGCTCGCGGACCATGG +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSTCRTG*GARGPW
Trigger: CCATGGTCCGCGAGCTCCTCATCCAGTTCTACAAGT...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACATTAGTTCAGGCCGGGTaGAGGGCGGTGCTGGCAGAA +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTLVQAG*RAVLAE
Trigger: TTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAA...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGACACGGAACATGGATTTaGGTCTTACTAAAACTGTGT +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGHGTWI*VLLKLC
Trigger: ACACAGTTTTAGTAAGACTCAAATCCATGTTCCGTG...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCCTCATGGATGGCAAGTaGCTCATGACCACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSLMDGK*LMTTSR
Trigger: CCTGGACGTGGTCATGAGGCACTTGCCATCCATGAG...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCAATACATCTTTGTCCTaGCACAATGTTACAGACCTC +
Preference number: 4 (lower is better)
Translates to: PADASAWPPALSRGTWVSNTSLS*HNVTDL
Trigger: GAGGTCTGTAACATTGTGGCAGGACAAAGATGTATT...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGGAGATCTTTCTGAGCTaGTCTGTGAAGGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLEIFLS*SVKDFR
Trigger: TCTGAAGTCCTTCACAGAGCAGCTCAGAAAGATCTC...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACAGGGGTGAGTGACGTCTaGTCCCAGAAAGATGACGGG +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTGVSDV*SQKDDG
Trigger: CCCGTCATCTTTCTGGGAGCAGACGTCACTCACCCC...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTCTTGTATGATCTCCTaGCGGTGCTGCTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASSCMIS*RCCCTR
Trigger: GCGCGTGCAGCAGCACCGGCAGGAGATCATACAAGA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCGCTCGTTCTTGTCAGTaGAGAAGAGCCGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESARSCQ*RRAGCG
Trigger: ACCACACCCGGCTCTTCTGCACTGACAAGAACGAGC...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCACAGAAGAACGGCCCATaGCCTCTGCTGGCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSQKNGP*PLLALL
Trigger: TAGCAGGGCCAGCAGAGGGCATGGGCCGTTCTTCTG...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTGATCAGACGATCAGATaGCGGGGAAGGGCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECDQTIR*RGRATS
Trigger: AGAGGTGGCCCTTCCCCGGCATCTGATCGTCTGATC...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGAACAGAGCCACGTGTTaGATTCATGTCACTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRNRATC*IHVTSP
Trigger: AGGAGAAGTGACATGAATGCAACACGTGGCTCTGTT...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCATCAGACGGTCCACTaGGCCACTAGTGGGAACTTC +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESHQTVH*ATSGNF
Trigger: GAAGTTCCCACTAGTGGCGCAGTGGACCGTCTGATG...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAAATTTAAAGTGGCATTaGCACCTAGCATCATGCAAG +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGNLKWH*HLASCK
Trigger: CTTGCATGATGCTAGGTGGCAATGCCACTTTAAATT...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCCTCGGGCACTTCTCTaGCTTGATATCCAATTCATA +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRPRALL*LDIQFI
Trigger: TATGAATTGGATATCAAGCCAGAGAAGTGCCCGAGG...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGTGTGTTTTAAAGTGCTaGACCATGTGTTCCACGATT +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTCVLKC*TMCSTI
Trigger: AATCGTGGAACACATGGTCCAGCACTTTAAAACACA...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTCTCAAAAGGGACGCTaGGCAGCCGCCCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASSQKGR*AAALKV
Trigger: CACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTGGAATGTTTGGTGACTaGCGGGCCGCCGGGTCACAT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICGMFGD*RAAGSH
Trigger: ATGTGACCCGGCGGCCCGCCAGTCACCAAACATTCC...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACAGTTGGACAGGGTCTGTaGCGTGGTCCTCTGCACGTT +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTVGQGL*RGPLHV
Trigger: AACGTGCAGAGGACCACGCCACAGACCCTGTCCAAC...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCATGGCCAGCAACTCGTaGTGGAGAACCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSMASNS*WRTCWN
Trigger: GTTCCAGCAGGTTCTCCACCACGAGTTGCTGGCCAT...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACATCCTTATCCACCAGGTaGTACCTGGCCCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTSLSTR*YLARKA
Trigger: GGCCTTCCGGGCCAGGTACCACCTGGTGGATAAGGA...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTCTCTGCCCAGAGGTATaGCTTCCTTCAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: WPVLGGLARYSAQRYGFLLCPEV*LPSALS
Trigger: TGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAG...AAGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTTGGCCAGTGCTTGGTaGTCTCGCCCGTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASLASAW*SRPLLC
Trigger: GCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGTCCAAGTTTGAAATCTaGGACGGAAGGCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLSKFEI*DGRHSG
Trigger: TCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGA...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp GACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCTACTTAACAGTGGGATaGGGACAAAGCCAGCGAGTG +
Preference number: 4 (lower is better)
Translates to: DRVRPPRLQTAWHHSLQVYLTVG*GQSQRV
Trigger: CACTCGCTGGCTTTGTCCCCATCCCACTGTTAAGTA...GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTAAAACAACAGGACGGTaGCTTTGCGTCACCGAAGGG +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRKTTGR*LCVTEG
Trigger: CCCTTCGGTGACGCAAAGCCACCGTCCTGTTGTTTT...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTCGGCTGCCTGACGTGTaGCCGGTCTATCCTAGCGTA +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICRLPDV*PVYPSV
Trigger: TACGCTAGGATAGACCGGCCACACGTCAGGCAGCCG...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAGCTTGTCTGGGCCACTaGGATTGTCCACTGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTACLGH*DCPLSG
Trigger: TCCAGACAGTGGACAATCCCAGTGGCCCAGACAAGC...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGCCTTCTGTAGTGATTTaGCTAAGCCAATACATTCAC +
Preference number: 4 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTPSVVI*LSQYIH
Trigger: GTGAATGTATTGGCTTAGCCAAATCACTACAGAAGG...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCGCCTGCCTTGTGGAATaGCACAGGCTTAGTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESACLVE*HRLSSP
Trigger: TGGGGAACTAAGCCTGTGCCATTCCACAAGGCAGGC...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAAGAAAGCTTCCAAGGCTaGAGGTCCACGCCTGCCTTG +
Preference number: 4 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQESFQG*RSTPAL
Trigger: CAAGGCAGGCGTGGACCTCCAGCCTTGGAAGCTTTC...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGATACACTGTAGCAGTTaGCTGGGGAAAAGTCTATCA +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRIHCSS*LGKSLS
Trigger: TGATAGACTTTTCCCCAGCCAACTGCTACAGTGTAT...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACACAATGGCCCACACCTTaGTCTCGATGCCCGTGTGGA +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTQWPTP*SRCPCG
Trigger: TCCACACGGGCATCGAGATCAAGGTGTGGGCCATTG...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp ATCAAACTCAGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTTGTCTCCCACGCGCTTaGCCTCGGCGTACACGGGCG +
Preference number: 4 (lower is better)
Translates to: IKLRPGISMQRHPPYCRICLPRA*PRRTRA
Trigger: CGCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACA...AATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACAACTTGTAGAACTGGATaGGGAGCTCGCGGACCATGG +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTTCRTG*GARGPW
Trigger: CCATGGTCCGCGAGCTCCTCATCCAGTTCTACAAGT...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACAACTCGGTGGGGTGGGTaGTTTTCGTGTCCACAGTCG +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTTRWGG*FSCPQS
Trigger: CGACTGTGGACACGAAAATCACCCACCCCACCGAGT...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR TCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAACCTCTGGCTTTCACGTaGACAGGGCTGGGACTTACC +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLEPLAFT*TGLGLT
Trigger: GGTAAGTCCCAGCCCTGTTCACGTGAAAGCCAGAGG...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGCATGGCAAAACATACTaGAAGAAGCATAAGCGAGGG +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGHGKTY*KKHKRG
Trigger: CCCTCGCTTATGCTTCTTTCAGTATGTTTTGCCATG...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCTTTTCAAGCCAGAACTaGACAGATAGATGTTCACAA +
Preference number: 4 (lower is better)
Translates to: PADASAWPPALSRGTWVSFSSQN*TDRCSQ
Trigger: TTGTGAACATCTATCTGTTCAGTTCTGGCTTGAAAA...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGGGTTATGTAAGGAGGTaGAAAAACACTATGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRGYVRR*KNTMPN
Trigger: GTTTGGCATAGTGTTTTTTCACCTCCTTACATAACC...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGATCTGTGTTTTAAAGTaGTGGACCATGTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRICVLK*WTMCST
Trigger: CGTGGAACACATGGTCCAGCACTTTAAAACACAGAT...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCATCTTGTATGATCTCCTaGCGGTGCTGCTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSSCMIS*RCCCTR
Trigger: GCGCGTGCAGCAGCACCGGCAGGAGATCATACAAGA...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCATCGTGGTGGAGAACCTaGTGGAACTGGCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIASWWRT*WNWPSE
Trigger: CTCTGAAGGCCAGTTCCAGCAGGTTCTCCACCACGA...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAAGATAGTGCGAAGGCCTaGTTGTCCCCTGGATGCCAG +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLEDSAKA*LSPGCQ
Trigger: CTGGCATCCAGGGGACAAGCAGGCCTTCGCACTATC...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACACAGGTGAGCGTAGTATaGTGGCGCTGGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTQVSVV*WRWDGH
Trigger: GTGTCCATCCCAGCGCCAGCATACTACGCTCACCTG...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTACGTCTCATGTTCGATaGTGGCTGTCACGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECTSHVR*WLSRKG
Trigger: GCCCTTCCGTGACAGCCAGCATCGAACATGAGACGT...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGGTTCTCATACAGGTCTaGAGTTCAAAATCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PALSRGTWVSHARGTRASVLIQV*SSKSKF
Trigger: AAACTTGGATTTTGAACTGCAGACCTGTATGAGAAC...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGATTCTACGAATCTCAGTaGATAGATCTATGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: QNTAPADASAWPPALSRGFYESQ*IDLWKS
Trigger: TGACTTCCATAGATCTATGCACTGAGATTCGTAGAA...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACATTCCGGAGATGCGCGTaGAGGAAGCTTGCGGTGGAT +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTFRRCA*RKLAVD
Trigger: ATCCACCGCAAGCTTCCTGCACGCGCATCTCCGGAA...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGATGGTCATGGTCAATaGATAAGAGATGGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGDGHGQ*IRDGSC
Trigger: GCAAGACCCATCTCTTATGCATTGACCATGACCATC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGGGATGGCAGCCACAGTaGTCCCTCTGCAGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMGWQPQ*SLCSRC
Trigger: GCAACGGCTGCAGAGGGAGCACTGTGGCTGCCATCC...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTCTCAAAAGGGACGCTaGGCAGCCGCCCTGAAAGTG +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICSQKGR*AAALKV
Trigger: CACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGA...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAATCTCGATGCCCGTGTaGAACTGCTTGTTCCGCATG +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTISMPV*NCLFRM
Trigger: CATGCGGAACAAGCAGTTCCACACGGGCATCGAGAT...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCTGGCGCAGTAGCGATTaGGGTGGGCGTCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAWRSSD*GGRPCC
Trigger: GCAGCATGGACGCCCACCCCAATCGCTACTGCGCCA...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAAGCCAGCAACTCGTGGTaGAGAACCTGCTGGAACTGG +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLEASNSW*RTCWNW
Trigger: CCAGTTCCAGCAGGTTCTCCACCACGAGTTGCTGGC...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTGTAGTATGCTGGCGCTaGGATGGACACGGAGCGTGT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICVVCWR*DGHGAC
Trigger: ACACGCTCCGTGTCCATCCCAGCGCCAGCATACTAC...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTCTCTGCCCAGAGGTATaGCTTCCTTCAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSLCPEV*LPSALS
Trigger: TGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAG...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCATTGGCCAGTGCTTGGTaGTCTCGCCCGTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSLASAW*SRPLLC
Trigger: GCAGAGTAACGGGCGAGACCACCAAGCACTGGCCAA...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTTGGTCTGAGTGTAGCTaGTCTCGTGAATCCCACTCG +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSWSECS*SRESHS
Trigger: CGAGTGGGATTCACGAGACCAGCTACACTCAGACCA...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTGGGCTGGCCATCTGTTaGTCTGAGTGTAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECGLAIC*SECSWS
Trigger: AGACCAGCTACACTCAGACCAACAGATGGCCAGCCC...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACCTCTCTGGACCTaGAAATGCTGTAAACACACG +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNQPLWT*KCCKHT
Trigger: CGTGTGTTTACAGCATTTCCAGGTCCAGAGAGGTTG...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGTCAATGCATAAGAGATaGGTCTTGCACCAATCTCCT +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRSMHKR*VLHQSP
Trigger: AGGAGATTGGTGCAAGACCCATCTCTTATGCATTGA...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAAACACAATGCGTCCTaGGGAGCCAATTGCCCGGCA +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECKHNAS*GANCPA
Trigger: TGCCGGGCAATTGGCTCCCCAGGACGCATTGTGTTT...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTTTAGCTCTTCCGGAATaGAAGCACGCAACGCAGCAT +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSLALPE*KHATQH
Trigger: ATGCTGCGTTGCGTGCTTTCATTCCGGAAGAGCTAA...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTCTCGATTACTGGCTGTaGCTTGTAAAACGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRLDYWL*LVKRCC
Trigger: GCAACAGCGTTTTACAAGGCACAGCCAGTAATCGAG...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTCGCAGAACCAACTTGTaGCTGTCCTTGAAATACTGG +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRRRTNL*LSLKYW
Trigger: CCAGTATTTCAAGGACAGGCACAAGTTGGTTCTGCG...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGAATACATCTTTGTCCTaGCACAATGTTACAGACCTC +
Preference number: 4 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRNTSLS*HNVTDL
Trigger: GAGGTCTGTAACATTGTGGCAGGACAAAGATGTATT...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTTGCTAATCTCTTCTTaGCGATCGGGCGCCGACCTA +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASLLISS*RSGADL
Trigger: TAGGTCGGCGCCCGATCGGCAAGAAGAGATTAGCAA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGATCTGTGTTGAAACTTaGACTTCGCATCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRICVET*TSHQFA
Trigger: AGCAAATTGATGCGAAGTGCAAGTTTCAACACAGAT...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGCTTGTCCCCTGGATaGCAGCGTGACTACACAGGT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICCLSPG*QRDYTG
Trigger: ACCTGTGTAGTCACGCTGGCATCCAGGGGACAAGCA...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR GCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAACTCTGGACCTGGAAATaGTGTAAACACACGGGGCCC +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLELWTWK*CKHTGP
Trigger: GGGCCCCGTGTGTTTACAGCATTTCCAGGTCCAGAG...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTAGGGAGACCCTGATGTaGAATCAAAAGGCTGCATGT +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRRETLM*NQKAAC
Trigger: ACATGCAGCCTTTTGATTGCACATCAGGGTCTCCCT...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGCGTTATGCCGTCCCGTaGAGAGAACCCTCCCATGCC +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMRYAVP*REPSHA
Trigger: GGCATGGGAGGGTTCTCTGCACGGGACGGCATAACG...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCGCTGTTTCAAGATTTTaGCACACCTGCGCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASAVSRF*HTCAGS
Trigger: GGAGCCTGCGCAGGTGTGGCAAAATCTTGAAACAGC...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTCCAGGACCGACTTCCTaGAAGTCTGCATCAGACGGT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICPGPTS*KSASDG
Trigger: ACCGTCTGATGCAGACTTGCAGGAAGTCGGTCCTGG...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGGCTTGCACTGTGCCCTaGTGGTTGGTGCTGTGGGGT +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMACTVP*WLVLWG
Trigger: ACCCCACAGCACCAACCAGCAGGGCACAGTGCAAGC...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATATAAGAGATGGGTCTTaGACCAATCTCCTGCAATCC +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNIRDGS*TNLLQS
Trigger: GGATTGCAGGAGATTGGTGCAAGACCCATCTCTTAT...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTTCCTGGGGAGCCAATTaGCCGGCACGTCTTATTACT +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECSWGAN*PARLIT
Trigger: AGTAATAAGACGTGCCGGGCAATTGGCTCCCCAGGA...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCAGGTTAAAAACACAATaGGTCCTGGGGAGCCAATTG +
Preference number: 4 (lower is better)
Translates to: DRVRPPRLQTAWHHSLQVRLKTQ*VLGSQL
Trigger: CAATTGGCTCCCCAGGACGCATTGTGTTTTTAACCT...GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GTAGAGGATGGAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCAACAAACTCGATTACTaGCTGTGCCTTGTAAAACGC +
Preference number: 4 (lower is better)
Translates to: VEDGGRLQHPPSHVCHLINKLDY*LCLVKR
Trigger: GCGTTTTACAAGGCACAGCCAGTAATCGAGTTTGTT...GATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCAATCTCGATGCCCGTGTaGAACTGCTTGTTCCGCATG +
Preference number: 4 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIAISMPV*NCLFRM
Trigger: CATGCGGAACAAGCAGTTCCACACGGGCATCGAGAT...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAAATGGCCAGCAACTCGTaGTGGAGAACCTGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLEMASNS*WRTCWN
Trigger: GTTCCAGCAGGTTCTCCACCACGAGTTGCTGGCCAT...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCTCCTTATCCACCAGGTaGTACCTGGCCCGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLASLSTR*YLARKA
Trigger: GGCCTTCCGGGCCAGGTACCACCTGGTGGATAAGGA...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACACTCTGCCCAGAGGTATaGCTTCCTTCAGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTLCPEV*LPSALS
Trigger: TGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAG...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCATCTCATGTTCGATGCTaGCTGTCACGGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSSHVRC*LSRKGW
Trigger: CCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGA...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAGGGCAAGCTGTACAATaGTCACGCATCGTTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTGQAVQ*SRIVCG
Trigger: ACCACAAACGATGCGTGACCATTGTACAGCTTGCCC...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATGGACTGTCCCAGGCTaGGTGGAACTCAAAGACCAT +
Preference number: 4 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQWTVPG*VELKDH
Trigger: ATGGTCTTTGAGTTCCACCCAGCCTGGGACAGTCCA...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCACAATCCTGGCAGAGGTaGACTTGGTCAGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSQSWQR*TWSGYG
Trigger: CCCATACCCTGACCAAGTCCACCTCTGCCAGGATTG...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTCCTTGCCTTGCAGGATaGTGGGTTGGGGGAGAAAGA +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICPCLAG*WVGGER
Trigger: TCTTTCTCCCCCAACCCACCATCCTGCAAGGCAAGG...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp ACTGTCCCAGGCTGGGTGGAACTCAAAGACCATGCTTaGGAGAGCCACGGTAAGCGACGAGGAATCAAACAG +
Preference number: 4 (lower is better)
Translates to: TVPGWVELKDHA*ESHGKRRGIKQ
Trigger: CTGTTTGATTCCTCGTCGCTTACCGTGGCTCTCCAAAGCATGGTCTTTGAGTTCCACCCAGCCTGGGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp ACACACACACAGACTGGTCTGGGGCTGAAAAACTTCTaGCTGGGTGTGACACAGGGTAGCCTGACCACAGAG +
Preference number: 4 (lower is better)
Translates to: THTQTGLGLKNF*LGVTQGSLTTE
Trigger: CTCTGTGGTCAGGCTACCCTGTGTCACACCCAGCAAGAAGTTTTTCAGCCCCAGACCAGTCTGTGTGTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AGACATGTACAAAGGTGTGCAGCTGACCCAGCTGGAGATGTTTGGTCTATTAATTCTTGCCGGGCAGGATaGCCACCACCAGCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RHVQRCAADPAGDVWSINSCRAG*PPPAAG
Trigger: GCCTGCAGCTGGTGGTGGTCATCCTGCCCGGCAAGA...ATTAATAGACCAAACATCTCCAGCTGGGTCAGCTGCACACCTTTGTACATGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCAGTCTTTTTCTAGCTTaGTACAGGCCTCACGGATGG +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESSLFLA*YRPHGW
Trigger: CCATCCGTGAGGCCTGTATCAAGCTAGAAAAAGACT...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATGTCGAGGAACTTGGGTaGGCCACGCCAGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHVEELG*ATPGAH
Trigger: GTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGAC...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAAGAAACACACCTTTaGGACACATGGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSREETHL*DTWFQM
Trigger: CATCTGGAACCATGTGTCTCAAAGGTGTGTTTCTTC...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCACAGGGGCACCCCCATaGCAAAGTCACAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLATGAPP*QSHRCT
Trigger: AGTGCACCTGTGACTTTGTCATGGGGGTGCCCCTGT...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAATTCTGAAAGGACACTaGGGACCGGACTTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTILKGH*GPDFKG
Trigger: GCCTTTAAAGTCCGGTCCTCAGTGTCCTTTCAGAAT...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCGTAGGTCAGGAGAGATaGAATCGACAACAGTCCGTT +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSVGQER*NRQQSV
Trigger: AACGGACTGTTGTCGATTTCATCTCTCCTGACCTAC...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACACTGTTCAGTTTCGGGTaGGTGCTGAGGAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTLFSFG*VLRNRE
Trigger: TTCTCTATTCCTCAGCACTCACCCGAAACTGAACAG...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCGCATCGTGTAACGCCTaGAAGCTCACGCAGGACACC +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAASCNA*KLTQDT
Trigger: GGTGTCCTGCGTGAGCTTGCAGGCGTTACACGATGC...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTCTCATGGATGGCAAGTaGCTCATGACCACGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSLMDGK*LMTTSR
Trigger: CCTGGACGTGGTCATGAGGCACTTGCCATCCATGAG...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCGCAGAACCAACTTGTaGCTGTCCTTGAAATACTGG +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESRRTNL*LSLKYW
Trigger: CCAGTATTTCAAGGACAGGCACAAGTTGGTTCTGCG...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGAATACATCTTTGTCCTaGCACAATGTTACAGACCTC +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGNTSLS*HNVTDL
Trigger: GAGGTCTGTAACATTGTGGCAGGACAAAGATGTATT...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTCAGCACTGTCATGTTCCTTAGTGTGGTGCCTCTTCTaGACCACGATGAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: RPLLCPEVWLPSALSCSLVWCLF*TTMKVI
Trigger: GATCACCTTCATCGTGGTGCAGAAGAGGCACCACAC...TAAGGAACATGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAGTAACGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAAGGCTACAGCACACGCTaGTACTCCAGCAAAATAACG +
Preference number: 4 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQGYSTR*YSSKIT
Trigger: CGTTATTTTGCTGGAGTAGCAGCGTGTGCTGTAGCC...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAAAGTCGGGTCTAGGTaGAGGCTTGAAGGCATATCC +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECKVGSR*RLEGIS
Trigger: GGATATGCCTTCAAGCCTCCACCTAGACCCGACTTT...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR CCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCCAATCGGAAGGGGCATaGCTGTGTATAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSQSEGA*LCIDSS
Trigger: GGAAGAATCTATACACAGCCATGCCCCTTCCGATTG...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CGCAATAGCTTTATTCCTGCCCCCGTAGAGGATGGAGGGCGGCTGCAGCACCCGAAATTCACGGACGTATaGATCTGTGTTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: RNSFIPAPVEDGGRLQHPKFTDV*ICVETC
Trigger: GCAAGTTTCAACACAGATCCATACGTCCGTGAATTT...CGGGTGCTGCAGCCGCCCTCCATCCTCTACGGGGGCAGGAATAAAGCTATTGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATGTCCCAGACGCCCTaGACAGGGGTCGCAATAGCT +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAMSQTP*TGVAIA
Trigger: AGCTATTGCGACCCCTGTCCAGGGCGTCTGGGACAT...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACTGCCATTTCTTAGAGTaGGAGCTTCTGTCATTTAAA +
Preference number: 4 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHCHFLE*ELLSFK
Trigger: TTTAAATGACAGAAGCTCCCACTCTAAGAAATGGCA...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGGATTGTCCACTGTCTaGATTATGTCGACTTCTAAA +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGGLSTV*IMSTSK
Trigger: TTTAGAAGTCGACATAATCCAGACAGTGGACAATCC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACATGGCAGAGGTGGACTTaGTCAGGGTATGGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTWQRWT*SGYGRN
Trigger: GTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCA...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp GGGTCAGAGAGAGGTCACAGGAAAATGTCGTATGGCTaGTCTGGGCCACTGGGATTGTCCACTGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: GSERGHRKMSYG*SGPLGLSTVWI
Trigger: AATCCAGACAGTGGACAATCCCAGTGGCCCAGACAAGCCATACGACATTTTCCTGTGACCTCTCTCTGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACAAATTGGCCTGTAATTTaGTTGTTCTCCCGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTNWPVI*LFSRRS
Trigger: GGACCTCCGGGAGAACAATCAAATTACAGGCCAATT...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR TCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTCGTATGGATCTGTGTTaGAACTTGCACTTCGCATCA +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSRMDLC*NLHFAS
Trigger: TGATGCGAAGTGCAAGTTTCAACACAGATCCATACG...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAAAACCATATTTCCTATaGCATTGGGTTCTCATACAG +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKKPYFL*HWVLIQ
Trigger: CTGTATGAGAACCCAATGTCATAGGAAATATGGTTT...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGATTCACAGCTAGTTTaGGCCCATCAATTTCATAGA +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNDSQLV*AHQFHR
Trigger: TCTATGAAATTGATGGGCTCAAACTAGCTGTGAATC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCATTAAGCACTAAGAACTaGGAGGCGGTCCCATCTCCA +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSLSTKN*EAVPSP
Trigger: TGGAGATGGGACCGCCTCTCAGTTCTTAGTGCTTAA...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAAGAGGCGCATGAGCACTaGGGAAGTTTCTGTTTCTAT +
Preference number: 4 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQEAHEH*GSFCFY
Trigger: ATAGAAACAGAAACTTCCTCAGTGCTCATGCGCCTC...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAAGAAGAAAAAGAAAATaGGGCGAACTTGTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKRRKRK*GELVLH
Trigger: ATGAAGGACAAGTTCGCCTCATTTTCTTTTTCTTCT...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCAGCTACAGAAAGAACTaGATAAGAATGGCCCCAACG +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESSYRKN*IRMAPT
Trigger: CGTTGGGGCCATTCTTATTCAGTTCTTTCTGTAGCT...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCAATAAAATCACCCCTTaGCAGGGACAGGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESNKITP*QGQVVS
Trigger: AGAAACCACCTGTCCCTGTCAAGGGGTGATTTTATT...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCAAGGAATAGAGAAATGTaGAGACGGGCTCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIARNREM*RRALWR
Trigger: TCTCCAGAGAGCCCGTCTTCACATTTCTCTATTCCT...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTATCTGTGTTTTAAAGTaGTGGACCATGTGTTCCACG +
Preference number: 4 (lower is better)
Translates to: WPVLGGLARYSAQRYGFLICVLK*WTMCST
Trigger: CGTGGAACACATGGTCCAGCACTTTAAAACACAGAT...AAGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR GCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATGTATAGATTCTTCCTaGCGTCAAACACGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTCIDSS*RQTRAS
Trigger: GGAAGCCCGTGTTTGACGGCAGGAAGAATCTATACA...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTCTCGATTACTGGCTGTaGCTTGTAAAACGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECLDYWL*LVKRCC
Trigger: GCAACAGCGTTTTACAAGGCACAGCCAGTAATCGAG...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTTCATCTGCCCACAGTaGGTTATCTCCACCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSFICPQ*VISTFR
Trigger: TCTAAAGGTGGAGATAACGCACTGTGGGCAGATGAA...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATAGGATGGAGGGCGGCTaGAGCACCCGCCCAGTCACG +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNRMEGG*STRPVT
Trigger: CGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCT...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTGCAGGCCCACAAATCTaGATGTTAAACAAGAACCGC +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECAGPQI*MLNKNR
Trigger: GCGGTTCTTGTTTAACATGCAGATTTGTGGGCCTGC...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AGCGCTAACCTCAAGATCGGGCAACATATGGAACCCAAAGAAAGAAGCGAAGGAAGATTTTGCCACACCTaGGCAGGCTCCTGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: SANLKIGQHMEPKERSEGRFCHT*AGSCQP
Trigger: AGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT...TCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACAGGCCTGGAATTTCAATaGAACGCCACCCTCCATACT +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTGLEFQ*NATLHT
Trigger: AGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCC...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAGATAGATGTCAATTTTaGGGATGTCCATTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKDRCQF*GCPFRR
Trigger: TCTTCGAAATGGACATCCCCAAAATTGACATCTATC...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCGTGAAGGACTTCAGATaGACTTCCGTGCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAVKDFR*TSVHWR
Trigger: GCGCCAGTGCACGGAAGTCCATCTGAAGTCCTTCAC...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCACAGGGTCTGTGGCGTaGTCCTCTGCACGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLATGSVA*SSARSS
Trigger: TGAAGAACGTGCAGAGGACCACGCCACAGACCCTGT...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCAGAACCTGCTGGAACTaGCCTTCAGAGACACCGTCG +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLARTCWN*PSETPS
Trigger: CGACGGTGTCTCTGAAGGCCAGTTCCAGCAGGTTCT...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATCTCAGTCGAGGAACTTaGGTGAGCCACGCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHLSRGT*VSHARG
Trigger: GCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAG...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAATCACGTGAACAGGGCTaGGACTTACCCTACTGTACT +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLESREQG*DLPYCT
Trigger: AGTACAGTAGGGTAAGTCCCAGCCCTGTTCACGTGA...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ACGATCAGATGCCGGGGAAGGGCCACCTCTGGCTTTCACGTGAACAGGGCTGGGGTACAGAAATCGAATTaGGAGACCTCTTTTAAAGAG +
Preference number: 4 (lower is better)
Translates to: TIRCRGRATSGFHVNRAGVQKSN*ETSFKE
Trigger: CTCTTTAAAAGAGGTCTCCCAATTCGATTTCTGTAC...CCCAGCCCTGTTCACGTGAAAGCCAGAGGTGGCCCTTCCCCGGCATCTGATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGGTACCACATGCACTaGAATATCTGTGTCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECRYHMH*NICVGQ
Trigger: TTGGCCGACACAGATATTCCAGTGCATGTGGTACCT...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTCAGGAAAATGTCGTATaGCTTGTCTGGGCCACTGGG +
Preference number: 4 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSQENVV*LVWATG
Trigger: CCCAGTGGCCCAGACAAGCCATACGACATTTTCCTG...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAAGATCGGGCAACATATaGAACCCAAAGAAAGAAGCG +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTRSGNI*NPKKEA
Trigger: CGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCT...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGATGCACTGTGCCCTGCTaGTTGGTGCTGTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRCTVPC*LVLWGV
Trigger: AACACCCCACAGCACCAACCAGCAGGGCACAGTGCA...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTGGCACTTCTCTGGCTTaGTATCCAATTCATAATGAT +
Preference number: 4 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVGTSLA*YPIHND
Trigger: ATCATTATGAATTGGATATCAAGCCAGAGAAGTGCC...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AGACATGTACAAAGGTGTGCAGCTGACCCAGCTGGAGATGTTTGGTCTATTAATCTTCTCCTGGCAGCGTaGCCTCCAGCTCCACCTTGT +
Preference number: 4 (lower is better)
Translates to: RHVQRCAADPAGDVWSINLLLAA*PPAPPC
Trigger: ACAAGGTGGAGCTGGAGGTCACGCTGCCAGGAGAAG...ATTAATAGACCAAACATCTCCAGCTGGGTCAGCTGCACACCTTTGTACATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTCGTATGGATCTGTGTTaGAACTTGCACTTCGCATCA +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECRMDLC*NLHFAS
Trigger: TGATGCGAAGTGCAAGTTTCAACACAGATCCATACG...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATAAACCATATTTCCTATaGCATTGGGTTCTCATACAG +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNKPYFL*HWVLIQ
Trigger: CTGTATGAGAACCCAATGTCATAGGAAATATGGTTT...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCGCTCCAAAACACTCTTaGTATGCCAAACAGATCACA +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSAPKHS*YAKQIT
Trigger: TGTGATCTGTTTGGCATATCAAGAGTGTTTTGGAGC...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGGTAATGGCACTGGTGTaGCTCGGACACACACACAGA +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMVMALV*LGHTHR
Trigger: TCTGTGTGTGTGTCCGAGTCACACCAGTGCCATTAC...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAAATAGCACCTTACAGCTaGGGACTTCACACACACACA +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLEIAPYS*GLHTHT
Trigger: TGTGTGTGTGTGAAGTCCTCAGCTGTAAGGTGCTAT...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCAGAGAGGTGTATCACTaGATGCTTCCCTTTAACTCC +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASREVYH*MLPFNS
Trigger: GGAGTTAAAGGGAAGCATTCAGTGATACACCTCTCT...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATAGAAAGCTTAGAACATaGGCAGGTTTGCAAATAAGA +
Preference number: 4 (lower is better)
Translates to: SRGTWVSHARGTRASPGNRKLRT*AGLQIR
Trigger: TCTTATTTGCAAACCTGCTCATGTTCTAAGCTTTCT...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAACATATGCAGAAGCGATaGCAGGTGGTACTACCTGAA +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLEHMQKR*QVVLPE
Trigger: TTCAGGTAGTACCACCTGTCATCGCTTCTGCATATG...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTGGCACGTCTTATTACTaGGAAAGTGCAAGAATGCTG +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECGTSYY*ESARML
Trigger: CAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCC...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATAGAAAGATGACGGGCTaGTGGAACACCGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHRKMTG*WNTGGL
Trigger: CAGGCCGCCGGTGTTCCAGCAGCCCGTCATCTTTCT...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTGTCCACAGTCGTGCCTaGTGGAATGTTTCCACTTTT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICVHSRA*WNVSTF
Trigger: AAAAGTGGAAACATTCCAGCAGGCACGACTGTGGAC...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR GCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGTCGTGTCCACAGTCGTaGCTGCTGGAATGTTTCCAC +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMSCPQS*LLECFH
Trigger: GTGGAAACATTCCAGCAGGCACGACTGTGGACACGA...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATGCAGAACACGGCACCTaGGGACGCCTCTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNAEHGT*GRLCMA
Trigger: GGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGC...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTACGGGGGAAGCGGGTTaGTGTCACATTAAGTCAATT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICTGEAG*CHIKSI
Trigger: AATTGACTTAATGTGACAGCAACCCGCTTCCCCCGT...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGGAAGCACCTCCTCCCTaGTGGGTGCCACCAGAGCTG +
Preference number: 4 (lower is better)
Translates to: IARHVLLLRKCKNADHLMEAPPP*WVPPEL
Trigger: CAGCTCTGGTGGCACCCAGCAGGGAGGAGGTGCTTC...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGCTGCATGTAAAGACTaGTTGAACCAGAGAAAACCA +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSAACKD*LNQRKP
Trigger: TGGTTTTCTCTGGTTCAAGCAGTCTTTACATGCAGC...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCACCATTAGGTACCACATaGACTGGAATATCTGTGTCG +
Preference number: 4 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIAPLGTT*TGISVS
Trigger: CGACACAGATATTCCAGTGCATGTGGTACCTAATGG...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGAAAGTCACAGGTGCACTaGATCCGCACCGAGAAGCGT +
Preference number: 4 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRKSQVH*IRTEKR
Trigger: ACGCTTCTCGGTGCGGATGCAGTGCACCTGTGACTT...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGATCTCCCACCCAAGACTaGGCACACAACTCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRSPTQD*AHNSQS
Trigger: ACTCTGGGAGTTGTGTGCGCAGTCTTGGGTGGGAGA...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCAACAAACTCGATTACTaGCTGTGCCTTGTAAAACGC +
Preference number: 4 (lower is better)
Translates to: CSMLAVTEGLAICWSECSNKLDY*LCLVKR
Trigger: GCGTTTTACAAGGCACAGCCAGTAATCGAGTTTGTT...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTCGATGCCCGTGTaGAACTGCTTGTTCCGCATG +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAISMPV*NCLFRM
Trigger: CATGCGGAACAAGCAGTTCCACACGGGCATCGAGAT...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGAGTGAAGGACTTCAGATaGACTTCCGTGCACTGGCGC +
Preference number: 4 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRVKDFR*TSVHWR
Trigger: GCGCCAGTGCACGGAAGTCCATCTGAAGTCCTTCAC...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AGACATGTACAAAGGTGTGCAGCTGACCCAGCTGGAGATGTTTGGTCTATTAATGAACCTGGACCGCCTTaGCCAGTGCTTGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: RHVQRCAADPAGDVWSINEPGPP*PVLGGL
Trigger: GAGACCACCAAGCACTGGCCAAGGCGGTCCAGGTTC...ATTAATAGACCAAACATCTCCAGCTGGGTCAGCTGCACACCTTTGTACATGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCTGGTCTGAGTGTAGCTaGTCTCGTGAATCCCACTCG +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAWSECS*SRESHS
Trigger: CGAGTGGGATTCACGAGACCAGCTACACTCAGACCA...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTATTCAGGCAACATATTaGCTGTTTTCAGTGTGGACA +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRIQATY*LFSVWT
Trigger: TGTCCACACTGAAAACAGCCAATATGTTGCCTGAAT...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCATCAAAACACCAGCTGTaGGCCCTGTGTTCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIASKHQL*ALCSFQ
Trigger: TTGAAAAGAACACAGGGCCCACAGCTGGTGTTTTGA...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCCCAACGTCCAGTTCCTaGAGACACTTGGGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAPTSSS*RHLGER
Trigger: TCTTTCCCCCAAGTGTCTCCAGGAACTGGACGTTGG...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCAGGTTTCTCAGGCCATTaGCCAAGAAACTGCTCAATA +
Preference number: 4 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIAGFSGH*PRNCSI
Trigger: TATTGAGCAGTTTCTTGGCCAATGGCCTGAGAAACC...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTTATCAAACTCAGGCCTaGAATTTCAATGCAACGCCA +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFYQTQA*NFNATP
Trigger: TGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGATA...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTCAAAACAGCACTGCATaGTTTCTATATTGCAAGCAC +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRQNSTA*FLYCKH
Trigger: GTGCTTGCAATATAGAAACCATGCAGTGCTGTTTTG...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp GTCCGTGGTGTCACTCTTAGTGCAACAGTTTCTAGATaGGCAAACCCAAGTCTGGGGCCCCAAATGCAAACC +
Preference number: 4 (lower is better)
Translates to: VRGVTLSATVSR*ANPSLGPQMQT
Trigger: GGTTTGCATTTGGGGCCCCAGACTTGGGTTTGCCAATCTAGAAACTGTTGCACTAAGAGTGACACCACGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp GAAACTTGCACTTCGCATCAATTTGCTAATCTCTTCTaGCCGATCGGGCGCCGACCTAGCAGTCGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: ETCTSHQFANLF*PIGRRPSSRSD
Trigger: ATCAGAGCGACTGCTAGGTCGGCGCCCGATCGGCAAGAAGAGATTAGCAAATTGATGCGAAGTGCAAGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR TCA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCGATTCACAGCTAGTTTaGGCCCATCAATTTCATAGA +
Preference number: 4 (lower is better)
Translates to: VTEGLAICWSECSWSRESDSQLV*AHQFHR
Trigger: TCTATGAAATTGATGGGCTCAAACTAGCTGTGAATC...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR TCA 90 bp CGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTCGTCTGCATTGTCTTTaGAACCATGCAACTATTTTA +
Preference number: 4 (lower is better)
Translates to: RRPHAQQSHHQQLSTNLSRLHCL*NHATIL
Trigger: TAAAATAGTTGCATGGTTTCAAAGACAATGCAGACG...ACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAACAGTTCTCTCACTTCTaGGTAAATTCTCACAAACGC +
Preference number: 4 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQQFSHF*VNSHKR
Trigger: GCGTTTGTGAGAATTTACTCAGAAGTGAGAGAACTG...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTTCATCTGCCCACAGTaGGTTATCTCCACCTTTAGA +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICFICPQ*VISTFR
Trigger: TCTAAAGGTGGAGATAACGCACTGTGGGCAGATGAA...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTGAGATCTTTCTGAGCTaGTCTGTGAAGGACTTCAGA +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICEIFLS*SVKDFR
Trigger: TCTGAAGTCCTTCACAGAGCAGCTCAGAAAGATCTC...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATCCCCCTGCGCGTATTTaGAGAAGCACGGCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNPPARI*RSTAGP
Trigger: AGGGCCAGCCGTGCTTCTGCAAATACGCGCAGGGGG...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATATGACCACCACCAGCTaGAGGCCCGCATACGTGTTC +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHMTTTS*RPAYVF
Trigger: GAACACGTATGCGGGCCTGCAGCTGGTGGTGGTCAT...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTTCTGTCTCAGGCATCTaGTCAGGAAGCACCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCSVSGI*SGSTSS
Trigger: GGAGGAGGTGCTTCCTGAGCAGATGCCTGAGACAGA...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGCTGGAGGTCCACGCCTaGCTTGTGGAATGGCACAGG +
Preference number: 4 (lower is better)
Translates to: IARHVLLLRKCKNADHLMLEVHA*LVEWHR
Trigger: CCTGTGCCATTCCACAAGGCAGGCGTGGACCTCCAG...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGAACTGGTGTCCTATGTaGACAGCTCAAGGTGACACC +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMNWCPM*TAQGDT
Trigger: GGTGTCACCTTGAGCTGTGCACATAGGACACCAGTT...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTTGCCACCTAGCATCATaGAAGCGTGGACATCTTCAA +
Preference number: 4 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSCHLAS*KRGHLQ
Trigger: TTGAAGATGTCCACGCTTGCATGATGCTAGGTGGCA...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTAGGTGTATCACTGAATaGTTCCCTTTAACTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFRCITE*FPLTPE
Trigger: TTCTGGAGTTAAAGGGAAGCATTCAGTGATACACCT...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACACTATTTTTGAGATCCTaGAGCAAAAAGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTLFLRS*SKKPPK
Trigger: TTTGGGAGGCTTTTTGCTGCAGGATCTCAAAAATAG...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CGACGGCCTCACGCCCAGCAGAGCCACCACCAACAGCTTTCTACGAATCTCAGTACACATTTAGGATCATaGTACTTCCTCAATCGCAAT +
Preference number: 4 (lower is better)
Translates to: RRPHAQQSHHQQLSTNLSTHLGS*YFLNRN
Trigger: ATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGT...ACTGAGATTCGTAGAAAGCTGTTGGTGGTGGCTCTGCTGGGCGTGAGGCCGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAACCTCGGGCACTTCTCTaGCTTGATATCCAATTCATA +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLEPRALL*LDIQFI
Trigger: TATGAATTGGATATCAAGCCAGAGAAGTGCCCGAGG...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAACAAACTCGATTACTaGCTGTGCCTTGTAAAACGC +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECNKLDY*LCLVKR
Trigger: GCGTTTTACAAGGCACAGCCAGTAATCGAGTTTGTT...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAAAATTCACGGACGTATaGATCTGTGTTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTKFTDV*ICVETC
Trigger: GCAAGTTTCAACACAGATCCATACGTCCGTGAATTT...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTCAAGGTGACACCACACCAAAGTAAGCGGTTTCCCAGGAAGTCACAAAACAGATCGAACTCGGTGGGGTaGGTGATTTTCGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LKVTPHQSKRFPRKSQNRSNSVG*VIFVST
Trigger: TGTGGACACGAAAATCACCCACCCCACCGAGTTCGA...TCTGTTTTGTGACTTCCTGGGAAACCGCTTACTTTGGTGTGGTGTCACCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTCACACGAGCATCGCCTaGAAATCAACTTTAGTGACA +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICHTSIA*KSTLVT
Trigger: TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTG...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AGACATGTACAAAGGTGTGCAGCTGACCCAGCTGGAGATGTTTGGTCTATTAATCATCCGTCCCTCCCATaGGTACACGCTGCACAGTCT +
Preference number: 4 (lower is better)
Translates to: RHVQRCAADPAGDVWSINHPSLP*VHAAQS
Trigger: AGACTGTGCAGCGTGTACCCATGGGAGGGACGGATG...ATTAATAGACCAAACATCTCCAGCTGGGTCAGCTGCACACCTTTGTACATGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCGTGGACAGGGAAGGGTaGCAAGGCCCCAGGCACCCA +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLVDREG*QGPRHP
Trigger: TGGGTGCCTGGGGCCTTGCCACCCTTCCCTGTCCAC...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGCTCAGAGTAAACTCATaGAGAAATTGGGGCGAGCGC +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMLRVNS*RNWGER
Trigger: GCGCTCGCCCCAATTTCTCCATGAGTTTACTCTGAG...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATCCTGGCAGAGGTGGACTTGGTCAGGGTATGGGAGAAACCACACGACTGGAAAGAAGCGATGACAGGTaGTACTACCTGAAGAAAGCT +
Preference number: 4 (lower is better)
Translates to: NPGRGGLGQGMGETTRLERSDDR*YYLKKA
Trigger: AGCTTTCTTCAGGTAGTACCACCTGTCATCGCTTCT...TTCCAGTCGTGTGGTTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTACTGTAGCAGTTGGCTaGGGAAAAGTCTATCAAATT +
Preference number: 4 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSTVAVG*GKVYQI
Trigger: AATTTGATAGACTTTTCCCCAGCCAACTGCTACAGT...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATCAAAGCCACGAGCTCTaGCTCGCCCCTTTCTGTCCA +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHQSHEL*LAPFCP
Trigger: TGGACAGAAAGGGGCGAGCCAGAGCTCGTGGCTTTG...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp CATCGCCTGTCAACTCAGAGTAAACTCATGGAGAAATaGGGGCGAGCGCTAACCTCAAGATCGGGCAACATA +
Preference number: 4 (lower is better)
Translates to: HRLSTQSKLMEK*GRALTSRSGNI
Trigger: TATGTTGCCCGATCTTGAGGTTAGCGCTCGCCCCAATTTCTCCATGAGTTTACTCTGAGTTGACAGGCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp TGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCTTaGACCATGATTCCAAATTCACGGACGTATGGATCT +
Preference number: 4 (lower is better)
Translates to: CSTRPVTSVISS*TMIPNSRTYGS
Trigger: AGATCCATACGTCCGTGAATTTGGAATCATGGTCAAAGATGAGATGACAGACGTGACTGGGCGGGTGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR TCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCTACCCTACTGTACTTTaGGGTTTTTACACTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASYPTVL*GFYTVS
Trigger: TGAGACAGTGTAAAAACCTCAAAGTACAGTAGGGTA...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCTCATTCAAAGGAGTGTaGGACCACCACCGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: NKINDVSCSMLAVTEGLASFKGV*DHHRKA
Trigger: TGCTTTTCGGTGGTGGTCTCACACTCCTTTGAATGA...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTGGCTTCAAACATAAATaGAATACTCACGTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFGFKHK*NTHVLQ
Trigger: TTGCAGAACGTGAGTATTTCATTTATGTTTGAAGCC...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATAGCCTGACCACAGAGTaGCACACGGGGGCTACAGCA +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNSLTTE*HTGATA
Trigger: TGCTGTAGCCCCCGTGTGTCACTCTGTGGTCAGGCT...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGCCATACTGTAGGATTTaGGTCACGCGTGTCTGTTTG +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMPYCRI*VTRVCL
Trigger: CAAACAGACACGCGTGACTCAAATCCTACAGTATGG...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATTTCATCTGCACGCACTaGGTGGCCATCCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNFICTH*VAIPST
Trigger: GGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTCTGGTGTTCGTTAATTaGGTCGTCATTACAGCAAGA +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICLVFVN*VVITAR
Trigger: TCTTGCTGTAATGACGACGCAATTAACGAACACCAG...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTCTTGCACCAATCTCCTaGAATCCTGGCAGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCLAPIS*NPGRGG
Trigger: TCCACCTCTGCCAGGATTGCAGGAGATTGGTGCAAG...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAGATAGATGTCAATTTTaGGGATGTCCATTTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTDRCQF*GCPFRR
Trigger: TCTTCGAAATGGACATCCCCAAAATTGACATCTATC...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR CCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATGTGTTTTAAAGTGCTaGACCATGTGTTCCACGATT +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTCVLKC*TMCSTI
Trigger: AATCGTGGAACACATGGTCCAGCACTTTAAAACACA...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCTGGCGCAGTAGCGATTaGGGTGGGCGTCCATGCTGC +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLWRSSD*GGRPCC
Trigger: GCAGCATGGACGCCCACCCCAATCGCTACTGCGCCA...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTCCAGCTGGAGATGTTTaGTCTATTAATGTTTTTAGT +
Preference number: 4 (lower is better)
Translates to: LAVTEGLAICWSECSWSRPAGDV*SINVFS
Trigger: ACTAAAAACATTAATAGACCAAACATCTCCAGCTGG...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATCAAACTCAGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTTTTCCACCGCTCCCCTaGTGTTCGTTAATTGCGTCG +
Preference number: 4 (lower is better)
Translates to: IKLRPGISMQRHPPYCRIFPPLP*CSLIAS
Trigger: CGACGCAATTAACGAACACCAGGGGAGCGGTGGAAA...AATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AGCGCTAACCTCAAGATCGGGCAACATATGGAACCCAAAGAAAGAAGCGAAGGACCAACAGTTCCCTCTTaGGCAAGCTGTACAATGGTC +
Preference number: 4 (lower is better)
Translates to: SANLKIGQHMEPKERSEGPTVPS*ASCTMV
Trigger: GACCATTGTACAGCTTGCCCAAGAGGGAACTGTTGG...TCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTTCCACGCCTGCCTTGTaGAATGGCACAGGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCSTPAL*NGTGLV
Trigger: AACTAAGCCTGTGCCATTCCACAAGGCAGGCGTGGA...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAATTCCATGACCAATTaGACTTTTCTCCCACCTGTA +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECNSMTN*TFLPPV
Trigger: TACAGGTGGGAGAAAAGTCCAATTGGTCATGGAATT...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp CCCAGACAGCCTGACGCAGGTGGAAGAAACACACCTTaGAGACACATGGTTCCAGATGATTGTAAAAATGGC +
Preference number: 4 (lower is better)
Translates to: PRQPDAGGRNTP*RHMVPDDCKNG
Trigger: GCCATTTTTACAATCATCTGGAACCATGTGTCTCAAAGGTGTGTTTCTTCCACCTGCGTCAGGCTGTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATAGACTGGTCTGGGGCTaGAAAACTTCTTGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHRLVWG*KTSCWV
Trigger: CACCCAGCAAGAAGTTTTTCAGCCCCAGACCAGTCT...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCAAATGTATTATTTGCATaGCAGTCGGTGTTGAAGCAC +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSNVLFA*QSVLKH
Trigger: GTGCTTCAACACCGACTGTCATGCAAATAATACATT...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTTATGATACAGCATCTTaGTCTGAACAGTTTACACTC +
Preference number: 4 (lower is better)
Translates to: SCSMLAVTEGLAICWSECYDTAS*SEQFTL
Trigger: GAGTGTAAACTGTTCAGATCAAGATGCTGTATCATA...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTTGGACACGGAGCGTGTaGAGCGCACGTAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFWTRSV*SARRCD
Trigger: GTCACACCTACGTGCGCTGCACACGCTCCGTGTCCA...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACAGTTCTCATACAGGTCTaGAGTTCAAAATCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTVLIQV*SSKSKF
Trigger: AAACTTGGATTTTGAACTGCAGACCTGTATGAGAAC...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCACCTGCGCAGGCTCCTaGCAGCCTGAAGGATGGCAT +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLTCAGS*QPEGWH
Trigger: ATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGT...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTAGGGCCGCTGCTGAATaGAGGCCTCTGCCTCCACAA +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFRAAAE*RPLPPQ
Trigger: TTGTGGAGGCAGAGGCCTGCATTCAGCAGCGGCCCT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACAAAATTCACGGACGTATaGATCTGTGTTGAAACTTGC +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTKFTDV*ICVETC
Trigger: GCAAGTTTCAACACAGATCCATACGTCCGTGAATTT...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATAAGATGACGGGCTGCTaGAACACCGGCGGCCTGCCC +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDKMTGC*NTGGLP
Trigger: GGGCAGGCCGCCGGTGTTCCAGCAGCCCGTCATCTT...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp ATCAAACTCAGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTTCAAAGACCATGCTTTaGAGAGCCACGGTAAGCGAC +
Preference number: 4 (lower is better)
Translates to: IKLRPGISMQRHPPYCRISKTML*RATVSD
Trigger: GTCGCTTACCGTGGCTCTCCAAAGCATGGTCTTTGA...AATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTAGGTTAAGTCAAAACTaGTGTCCTATGTGCACAGCT +
Preference number: 4 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSRLSQN*CPMCTA
Trigger: AGCTGTGCACATAGGACACCAGTTTTGACTTAACCT...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGAGCATCATGCAAGCGTaGACATCTTCAAGACACACA +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMSIMQA*TSSRHT
Trigger: TGTGTGTCTTGAAGATGTCCACGCTTGCATGATGCT...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATACGTCTCATGTTCGATaGTGGCTGTCACGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNTSHVR*WLSRKG
Trigger: GCCCTTCCGTGACAGCCAGCATCGAACATGAGACGT...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTACGGGGCCCACCTTCTaGCACTGCTCCTTAGTTCAG +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFTGPTF*HCSLVQ
Trigger: CTGAACTAAGGAGCAGTGGCAGAAGGTGGGCCCCGT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCAAAAACACTCTTGATATaGCAAACAGATCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSKTLLI*QTDHRS
Trigger: GCTTCTGTGATCTGTTTGGCATATCAAGAGTGTTTT...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTTTTCACATTCAGTTTaGTTAAAGCAAGGCACACCT +
Preference number: 4 (lower is better)
Translates to: INDVSCSMLAVTEGLAICFSHSV*LKQGTP
Trigger: AGGTGTGCCTTGCTTTAAGCAAACTGAATGTGAAAA...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTATGCAAGGAGGCCCTTaGGTCCTAGTAGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFMQGGP*VLVAGG
Trigger: TCCGCCTGCTACTAGGACGCAAGGGCCTCCTTGCAT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGCATTCTCAGAGAGACTaGAAAGGACACTTAGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMHSQRD*KGHLAL
Trigger: AAGAGCTAAGTGTCCTTTGCAGTCTCTCTGAGAATG...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATAGGGGCGAGCGGCTGTaGAGTGTCCCCTCGAAACAC +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDRGERL*SVPSKH
Trigger: GTGTTTCGAGGGGACACTGCACAGCCGCTCGCCCCT...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GGGGAGAGGGGGAGAGAGAGAGAGAGAGAGAGAGGTGTATCACTGAATGCTTCCATGCTGATCATCTTATaGAGCATACTAAAGGATGAT +
Preference number: 4 (lower is better)
Translates to: GERGRERERERGVSLNASMLIIL*SILKDD
Trigger: ATCATCCTTTAGTATGCTGCATAAGATGATCAGCAT...GGAAGCATTCAGTGATACACCTCTCTCTCTCTCTCTCTCTCTCCCCCTCTCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAAAAACACGACAATAGATaGTCAGTTTCTCAGCATTTA +
Preference number: 4 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQKHDNR*SVSQHL
Trigger: TAAATGCTGAGAAACTGAGCATCTATTGTCGTGTTT...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCACCACGTCCAGGGCCTaGATCGTCTCAAAAGGGACG +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLTTSRA*IVSKGT
Trigger: CGTCCCTTTTGAGACGATCCAGGCCCTGGACGTGGT...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACAGTAAACTTTACCCTTTaGGAATCTGTCAGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTVNFTL*ESVRGF
Trigger: AAAACCTCTGACAGATTCCCAAAGGGTAAAGTTTAC...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTGTTGGACAGGGTCTGTaGCGTGGTCCTCTGCACGTT +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFVGQGL*RGPLHV
Trigger: AACGTGCAGAGGACCACGCCACAGACCCTGTCCAAC...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AGCGCTAACCTCAAGATCGGGCAACATATGGAACCCAAAGAAAGAAGCGAAGGACACACGAGCATCGCCTaGAAATCAACTTTAGTGACA +
Preference number: 4 (lower is better)
Translates to: SANLKIGQHMEPKERSEGHTSIA*KSTLVT
Trigger: TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTG...TCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACACTTTTCGAAGTACTCTaGCCCACTAAAAATGAAAGT +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTLFEVL*PTKNES
Trigger: ACTTTCATTTTTAGTGGGCCAGAGTACTTCGAAAAG...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AGCGCTAACCTCAAGATCGGGCAACATATGGAACCCAAAGAAAGAAGCGAAGGAGCTGTGGGGTGTTCTTaGGATCAACTCACTCATTTT +
Preference number: 4 (lower is better)
Translates to: SANLKIGQHMEPKERSEGAVGCS*DQLTHF
Trigger: AAAATGAGTGAGTTGATCCCAAGAACACCCCACAGC...TCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGTGCTGGTTGGTGCTGTaGGGTGTTCTTGGGATCAAC +
Preference number: 4 (lower is better)
Translates to: IARHVLLLRKCKNADHLMCWLVL*GVLGIN
Trigger: GTTGATCCCAAGAACACCCCACAGCACCAACCAGCA...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp CAATTGCTTCCAGGTAGTGACGTAGTAGAACCGCCGGGGCCAAACTCAATGTCTAGGCTTAATTTAAAGTaGCATTGCCACCTAGCATCA +
Preference number: 4 (lower is better)
Translates to: QLLPGSDVVEPPGPNSMSRLNLK*HCHLAS
Trigger: TGATGCTAGGTGGCAATGCCACTTTAAATTAAGCCT...AGACATTGAGTTTGGCCCCGGCGGTTCTACTACGTCACTACCTGGAAGCAATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATTTCATCTGCACGCACTaGGTGGCCATCCCCAGCACC +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDFICTH*VAIPST
Trigger: GGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATAGAAAGATGACGGGCTaGTGGAACACCGGCGGCCTG +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDRKMTG*WNTGGL
Trigger: CAGGCCGCCGGTGTTCCAGCAGCCCGTCATCTTTCT...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATTGGACACGGAGCGTGTaGAGCGCACGTAGGTGTGAC +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDWTRSV*SARRCD
Trigger: GTCACACCTACGTGCGCTGCACACGCTCCGTGTCCA...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACATTGAACAGAATGCTTTaGTTTCAACCCTTAGTTTGT +
Preference number: 4 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTLNRML*FQPLVC
Trigger: ACAAACTAAGGGTTGAAAGCAAAGCATTCTGTTCAA...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTAAGTCGCTTGCACTGTaGCCTGCTGGTTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFKSLAL*PAGWCC
Trigger: ACAGCACCAACCAGCAGGGCACAGTGCAAGCGACTT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTCCCGCGGCTCCAGACTaGATGGCATCACAGTTTACA +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFPAAPD*MASQFT
Trigger: TGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGG...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTAGAACCTGCTGGAACTaGCCTTCAGAGACACCGTCG +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFRTCWN*PSETPS
Trigger: CGACGGTGTCTCTGAAGGCCAGTTCCAGCAGGTTCT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATGAACCTGGACCGCCTTaGCCAGTGCTTGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDEPGPP*PVLGGL
Trigger: GAGACCACCAAGCACTGGCCAAGGCGGTCCAGGTTC...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTTGCAAGCACAAGACATaGTCACATGGTTCCACTGTA +
Preference number: 4 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCCKHKT*SHGSTV
Trigger: TACAGTGGAACCATGTGACCATGTCTTGTGCTTGCA...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp GGGTTCTCATACAGGTCTGCAGTTCAAAATCCAAGTTaGAAATCTGGGACGGAAGGCATTCTGGAAAACGGA +
Preference number: 4 (lower is better)
Translates to: GFSYRSAVQNPS*KSGTEGILENG
Trigger: TCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAACTGCAGACCTGTATGAGAACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
3UTR CAA 72 bp GACAAAAAGCCCACTCAGCACAAACAGAGTTGTCTGTaGTTAGCCTTCAAAATCGTCCGTGGTGTCACTCTT +
Preference number: 4 (lower is better)
Translates to: DKKPTQHKQSCL*LAFKIVRGVTL
Trigger: AAGAGTGACACCACGGACGATTTTGAAGGCTAACAACAGACAACTCTGTTTGTGCTGAGTGGGCTTTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp GTACAGAGACAAAAAGCCCACTCAGCACAAACAGAGTaGTCTGTTGTTAGCCTTCAAAATCGTCCGTGGTGT +
Preference number: 4 (lower is better)
Translates to: VQRQKAHSAQTE*SVVSLQNRPWC
Trigger: ACACCACGGACGATTTTGAAGGCTAACAACAGACAACTCTGTTTGTGCTGAGTGGGCTTTTTGTCTCTGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGCCCCACTACAGGAACTaGACTGACATGATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: IARHVLLLRKCKNADHLMPHYRN*TDMICS
Trigger: AGAACAGATCATGTCAGTTCAGTTCCTGTAGTGGGG...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATAAGTGTTTTCCGCAATaGGACCGAGTGCGTCCCCCG +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDKCFPQ*DRVRPP
Trigger: CGGGGGACGCACTCGGTCTCATTGCGGAAAACACTT...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATCAATCGCAATTTTTCTaGGGTCTGTGTTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHQSQFF*GLCWGK
Trigger: TTTCCCCCAACACAGACCTCAGAAAAATTGCGATTG...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AGACATGTACAAAGGTGTGCAGCTGACCCAGCTGGAGATGTTTGGTCTATTAATTCACCAGTTTTATCTTaGCAATCAAGACCACTCCCC +
Preference number: 4 (lower is better)
Translates to: RHVQRCAADPAGDVWSINSPVLS*QSRPLP
Trigger: GGGGAGTGGTCTTGATTGTCAAGATAAAACTGGTGA...ATTAATAGACCAAACATCTCCAGCTGGGTCAGCTGCACACCTTTGTACATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATTCTTGTATGATCTCCTaGCGGTGCTGCTGCACGCGC +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDSCMIS*RCCCTR
Trigger: GCGCGTGCAGCAGCACCGGCAGGAGATCATACAAGA...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCGTGTGGTGCCTCTTCTaGACCACGATGAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLVWCLF*TTMKVI
Trigger: GATCACCTTCATCGTGGTGCAGAAGAGGCACCACAC...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATCTGAATGCAGGCCTCTaGCTCCACAAAGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDLNAGL*LHKATS
Trigger: GCTCGTGGCTTTGTGGAGGCAGAGGCCTGCATTCAG...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTTATAAACACAGTGTCTaGCTCCTCAGGTGTATTTGG +
Preference number: 4 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCYKHSV*LLRCIW
Trigger: CCAAATACACCTGAGGAGGCAGACACTGTGTTTATA...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTACCAGAGGCTCGGGCTaGCTGATTTCAGCAACACAT +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFTRGSG*LISATH
Trigger: ATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGT...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATTCCAAGTTTGAAATCTaGGACGGAAGGCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHSKFEI*DGRHSG
Trigger: TCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGA...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTCTGTCCCAGGCTGGGTaGAACTCAAAGACCATGCTT +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFLSQAG*NSKTML
Trigger: AAGCATGGTCTTTGAGTTCCACCCAGCCTGGGACAG...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATCCGTGGGTCACAGTATaGCACACACATTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNPWVTV*HTHFQA
Trigger: GGCTTGAAAATGTGTGTGCCATACTGTGACCCACGG...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AGCGCTAACCTCAAGATCGGGCAACATATGGAACCCAAAGAAAGAAGCGAAGGACATTGTAAAGAAAGCTaGGTCCCCTCCATTTTATCT +
Preference number: 4 (lower is better)
Translates to: SANLKIGQHMEPKERSEGHCKES*VPSILS
Trigger: AGATAAAATGGAGGGGACCCAGCTTTCTTTACAATG...TCCTTCGCTTCTTTCTTTGGGTTCCATATGTTGCCCGATCTTGAGGTTAGCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp GGTGTTCTTGGGATCAACTCACTCATTTTAAGGACCTaGGAGCTACAGAAAGAACTGAATAAGAATGGCCCC +
Preference number: 4 (lower is better)
Translates to: GVLGINSLILRT*ELQKELNKNGP
Trigger: GGGGCCATTCTTATTCAGTTCTTTCTGTAGCTCCAAGGTCCTTAAAATGAGTGAGTTGATCCCAAGAACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp CAGACAATACATAGAGTACCACCTGAAACGAGGCCCTaGGAGCTGCTCAGCTTCTTAGAAAATAGAGAACTT +
Preference number: 4 (lower is better)
Translates to: QTIHRVPPETRP*ELLSFLENREL
Trigger: AAGTTCTCTATTTTCTAAGAAGCTGAGCAGCTCCAAGGGCCTCGTTTCAGGTGGTACTCTATGTATTGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCTTACAAGTCAGGGGCTaGGGAGCGGAAAGAAAGCTT +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLLQVRG*GAERKL
Trigger: AAGCTTTCTTTCCGCTCCTCAGCCCCTGACTTGTAA...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp ATCAAACTCAGGCCTGGAATTTCAATGCAACGCCACCCTCCATACTGTAGGATTTGTGTTTTAAAGTGCTaGACCATGTGTTCCACGATT +
Preference number: 4 (lower is better)
Translates to: IKLRPGISMQRHPPYCRICVLKC*TMCSTI
Trigger: AATCGTGGAACACATGGTCCAGCACTTTAAAACACA...AATCCTACAGTATGGAGGGTGGCGTTGCATTGAAATTCCAGGCCTGAGTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATCAATCGGAAGGGGCATaGCTGTGTATAGATTCTTCC +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNQSEGA*LCIDSS
Trigger: GGAAGAATCTATACACAGCCATGCCCCTTCCGATTG...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTGTTCCTGGAGACACTTaGGGGAAAGAGTTAATATTT +
Preference number: 4 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCVPGDT*GKELIF
Trigger: AAATATTAACTCTTTCCCCCAAGTGTCTCCAGGAAC...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp AGAAAGCAGCATGAACAGGAAGGATTCAGAACATTATaGTCTGCTTATAAACACAGTGTCTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: RKQHEQEGFRTL*SAYKHSVCLLR
Trigger: CCTGAGGAGGCAGACACTGTGTTTATAAGCAGACAATAATGTTCTGAATCCTTCCTGTTCATGCTGCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATTTGTGCTTCATCAGCTaGGTGAGTGACACACGGGGA +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDLCFIS*VSDTRG
Trigger: TCCCCGTGTGTCACTCACTCAGCTGATGAAGCACAA...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCTGTATAGATTCTTCCTaGCGTCAAACACGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLCIDSS*RQTRAS
Trigger: GGAAGCCCGTGTTTGACGGCAGGAAGAATCTATACA...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCCGCAGAACCAACTTGTaGCTGTCCTTGAAATACTGG +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLRRTNL*LSLKYW
Trigger: CCAGTATTTCAAGGACAGGCACAAGTTGGTTCTGCG...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTGTAAACTTTACCCTTTaGGAATCTGTCAGAGGTTTT +
Preference number: 4 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCVNFTL*ESVRGF
Trigger: AAAACCTCTGACAGATTCCCAAAGGGTAAAGTTTAC...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AAGACTGCAACGAGTCTGCTTAGGACTAAATCATCAGGCACCAAGAGACCATGTCACAGAAATGCACAATaGTCCATTTTCATCAAGCTA +
Preference number: 4 (lower is better)
Translates to: KTATSLLRTKSSGTKRPCHRNAQ*SIFIKL
Trigger: TAGCTTGATGAAAATGGACCATTGTGCATTTCTGTG...ACATGGTCTCTTGGTGCCTGATGATTTAGTCCTAAGCAGACTCGTTGCAGTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTTCTATGGAAGTCATCTaGCAAAAGAGCACACGGAGA +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFSMEVI*QKSTRR
Trigger: TCTCCGTGTGCTCTTTTGTCAGATGACTTCCATAGA...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATACACACACACCACTCTaGGTACACATCTTCACAAAT +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNTHTPL*VHIFTN
Trigger: ATTTGTGAAGATGTGTACTCAGAGTGGTGTGTGTGT...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATGTGTCTGTTTGGCTTTaGAGAGGAACTGGGATGGCA +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDVSVWL*RGTGMA
Trigger: TGCCATCCCAGTTCCTCTTCAAAGCCAAACAGACAC...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TGCCTGATTTCAGCAACACATTTAGGATCATGCTACTTCCTCAATCGCAATTTTTTCATCTGCCCACAGTaGGTTATCTCCACCTTTAGA +
Preference number: 4 (lower is better)
Translates to: CLISATHLGSCYFLNRNFFICPQ*VISTFR
Trigger: TCTAAAGGTGGAGATAACGCACTGTGGGCAGATGAA...AAAATTGCGATTGAGGAAGTAGCATGATCCTAAATGTGTTGCTGAAATCAGGCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATAAAATGGCACTTGTCTaGCAACCTCTCTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDKMALV*QPLWTW
Trigger: CCAGGTCCAGAGAGGTTGGCAGACAAGTGCCATTTT...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ATTGCCCGGCACGTCTTATTACTGAGAAAGTGCAAGAATGCTGATCATCTTATGAAGGCCAATTACGTCTaGATTGTCTTTGAAACCATG +
Preference number: 4 (lower is better)
Translates to: IARHVLLLRKCKNADHLMKANYV*IVFETM
Trigger: CATGGTTTCAAAGACAATGCAGACGTAATTGGCCTT...CATAAGATGATCAGCATTCTTGCACTTTCTCAGTAATAAGACGTGCCGGGCAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATACAGCAGATGCGAAGTaGGACATCGTAAAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNTADAK*DIVKRS
Trigger: ACTTCTTTTTACGATGTCCCACTTCGCATCTGCTGT...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATGGCACTTCTCTGGCTTaGTATCCAATTCATAATGAT +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNGTSLA*YPIHND
Trigger: ATCATTATGAATTGGATATCAAGCCAGAGAAGTGCC...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR TCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATCATGTAAAGACTGCTTaGACCAGAGAAAACCAAAAC +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNHVKTA*TRENQN
Trigger: GTTTTGGTTTTCTCTGGTTCAAGCAGTCTTTACATG...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATTTCACAAAACAGCACTaGATGGTTTCTATATTGCAA +
Preference number: 4 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHFTKQH*MVSILQ
Trigger: TTGCAATATAGAAACCATGCAGTGCTGTTTTGTGAA...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp GTTTCTCAGCATTTAGCTTTCTTCACCAGTTTTATCTaGACAATCAAGACCACTCCCCATCTGTTCAGTTTC +
Preference number: 4 (lower is better)
Translates to: VSQHLAFFTSFI*TIKTTPHLFSF
Trigger: GAAACTGAACAGATGGGGAGTGGTCTTGATTGTCAAGATAAAACTGGTGAAGAAAGCTAAATGCTGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp ACCATGATTCCAAATTCACGGACGTATGGATCTGTGTaGAAACTTGCACTTCGCATCAATTTGCTAATCTCT +
Preference number: 4 (lower is better)
Translates to: TMIPNSRTYGSV*KLALRINLLIS
Trigger: AGAGATTAGCAAATTGATGCGAAGTGCAAGTTTCAACACAGATCCATACGTCCGTGAATTTGGAATCATGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR TCA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATAAACCATATTTCCTATaGCATTGGGTTCTCATACAG +
Preference number: 4 (lower is better)
Translates to: NPSLKSGTEGILENGESNKPYFL*HWVLIQ
Trigger: CTGTATGAGAACCCAATGTCATAGGAAATATGGTTT...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR GCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCGCATGGTTTCTATATTaGAAGCACAAGACATGGTCA +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLAWFLY*KHKTWS
Trigger: TGACCATGTCTTGTGCTTGCAATATAGAAACCATGC...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
3UTR CAA 72 bp CCGAGGTCCCAAAGTCAAAGGCCAATTACGTCTGCATaGTCTTTGAAACCATGCAACTATTTTAAATGTATT +
Preference number: 4 (lower is better)
Translates to: PRSQSQRPITSA*SLKPCNYFKCI
Trigger: AATACATTTAAAATAGTTGCATGGTTTCAAAGACAATGCAGACGTAATTGGCCTTTGACTTTGGGACCTCGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCATAAATTTAATCACCTaGCCCAAAGTCCTCTCGTTA +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLINLIT*PKVLSL
Trigger: TAACGAGAGGACTTTGGGGCAGGTGATTAAATTTAT...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR TCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATGATTCACAGCTAGTTTaGGCCCATCAATTTCATAGA +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDDSQLV*AHQFHR
Trigger: TCTATGAAATTGATGGGCTCAAACTAGCTGTGAATC...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CCA 90 bp CAGAATGTTCAAGGCTTTAAAACCACACTTGTGTTTTGTGTTGCTTTCACTCTCCTTTCAACAGTCTATTaGGGTCCAAAAAGCATATAT +
Preference number: 4 (lower is better)
Translates to: QNVQGFKTTLVFCVAFTLLSTVY*GPKSIY
Trigger: ATATATGCTTTTTGGACCCCAATAGACTGTTGAAAG...GAGAGTGAAAGCAACACAAAACACAAGTGTGGTTTTAAAGCCTTGAACATTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR GCA 90 bp TTTAGGAGATTTTTAGGACACACGGGACTCTGTTTTAATAAGCAGCTTATAGATATCTGTGTTGAAACTTaGACTTCGCATCAATTTGCT +
Preference number: 4 (lower is better)
Translates to: FRRFLGHTGLCFNKQLIDICVET*TSHQFA
Trigger: AGCAAATTGATGCGAAGTGCAAGTTTCAACACAGAT...ATCTATAAGCTGCTTATTAAAACAGAGTCCCGTGTGTCCTAAAAATCTCCTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCTGCAGCGGGAATGTTaGGTGACTGGCGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PADASAWPPALSRGTWVSLQREC*VTGGPP
Trigger: CGGCGGCCCGCCAGTCACCAAACATTCCCGCTGCAG...GCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS GCA 90 bp GCTGCACGCGCACGGTGGCGCAGTAGCGATTGGGGTGGGCGTCCATaGTGCCCACCACCTGCAGGAACAGGCAGTGAGTGTGGTCAGGGG +
Preference number: 5 (lower is better)
Translates to: AARARWRSSDWGGRP*CPPPAGTGSECGQG
Trigger: CCCCTGACCACACTCACTGCCTGTTCCTGCAGGTGGTGGGCAGCATGGACGCCCACCCCAATCGCTACTGCGCCACCGTGCGCGTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520412.1
CDS-3UTR CAA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGGCCCCCTGCGCGTATTaGCAGAAGCACGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRAPCAY*QKHGWP
Trigger: GGGCCAGCCGTGCTTCTGCAAATACGCGCAGGGGGC...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCCAACCCGCTCGTTCTaGTCAGTGCAGAAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPPTRSF*SVQKSR
Trigger: CCGGCTCTTCTGCACTGACAAGAACGAGCGGGTTGG...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR CAA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGGCGCGTGCAGGAAGCTaGCGGTGGATCTGCGTGCTG +
Preference number: 5 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTARAGS*RWICVL
Trigger: CAGCACGCAGATCCACCGCAAGCTTCCTGCACGCGC...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS GCA 90 bp GCACGCGCACGGTGGCGCAGTAGCGATTGGGGTGGGCGTCCATGCTaGCCACCACCTGCAGGAACAGGCAGTGAGTGTGGTCAGGGGTTC +
Preference number: 5 (lower is better)
Translates to: ARARWRSSDWGGRPC*PPPAGTGSECGQGF
Trigger: GAACCCCTGACCACACTCACTGCCTGTTCCTGCAGGTGGTGGGCAGCATGGACGCCCACCCCAATCGCTACTGCGCCACCGTGCGCGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520412.1
CDS-3UTR CAA 90 bp GTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGACCTCGGCGTACACGGGCGCAATGGCCCACACCTaGATCTCGATGCCCGTGTGG +
Preference number: 5 (lower is better)
Translates to: VAIPSTVSPTRLTSAYTGAMAHT*ISMPVW
Trigger: CCACACGGGCATCGAGATCAAGGTGTGGGCCATTGC...GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACGTGTCTCCCACGCGCTaGACCTCGGCGTACACGGGC +
Preference number: 5 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHVSPTR*TSAYTG
Trigger: GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACAC...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGTGCGAAGGCCTGCTaGTCCCCTGGATGCCAGCGT +
Preference number: 5 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTSAKAC*SPGCQR
Trigger: ACGCTGGCATCCAGGGGACAAGCAGGCCTTCGCACT...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000523609.5
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGACGCCTTGGCCAGTGCTaGGTGGTCTCGCCCGTTACT +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGRLGQC*VVSPVT
Trigger: AGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCG...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGATGCAAGGAGGCCCTaGCGTCCTAGTAGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGDARRP*RPSSRR
Trigger: CCGCCTGCTACTAGGACGCAAGGGCCTCCTTGCATC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTGCGGGGGGGCCCAAGCCTCTaGAGGTCGGTCCGCACAGAA +
Preference number: 5 (lower is better)
Translates to: LLSSGRVKGGAGRTRHLRGGPSL*RSVRTE
Trigger: TTCTGTGCGGACCGACCTCAAGAGGCTTGGGCCCCC...CCGCAGGTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAG
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTTGAAGATGCGATCCTaGCCTTCTCCTGGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPLKMRS*PSPGSV
Trigger: CACGCTGCCAGGAGAAGGCAAGGATCGCATCTTCAA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GTAGAGGATGGAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCCTGCAGCGGGAATGTTaGGTGACTGGCGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: VEDGGRLQHPPSHVCHLILQREC*VTGGPP
Trigger: CGGCGGCCCGCCAGTCACCAAACATTCCCGCTGCAG...GATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCTCTAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCCGTGTGGAACTGCTaGTTCCGCATGTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: PALSRGTWVSHARGTRASPVWNC*FRMSQT
Trigger: CGTCTGGGACATGCGGAACAAGCAGTTCCACACGGG...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAGCAATGGCCCACACCTaGATCTCGATGCCCGTGTGG +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGAMAHT*ISMPVW
Trigger: CCACACGGGCATCGAGATCAAGGTGTGGGCCATTGC...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp TGCCTCATGACCACGTCCAGGGCCTGGATCGTCTCAAAAGGGACGCTGGGCAGCGCCCCCTGCGCGTATTaGCAGAAGCACGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: CLMTTSRAWIVSKGTLGSAPCAY*QKHGWP
Trigger: GGGCCAGCCGTGCTTCTGCAAATACGCGCAGGGGGC...GCTGCCCAGCGTCCCTTTTGAGACGATCCAGGCCCTGGACGTGGTCATGAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp GTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGACCTCGGCGTACACGGGCATCTTCAGGCAGAGGTaGGACAGGGTCTGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: VAIPSTVSPTRLTSAYTGIFRQR*DRVCGV
Trigger: CACGCCACAGACCCTGTCCAACCTCTGCCTGAAGAT...GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAATCTTCAGGCAGAGGTaGGACAGGGTCTGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGIFRQR*DRVCGV
Trigger: CACGCCACAGACCCTGTCCAACCTCTGCCTGAAGAT...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GTTCTTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGACCTCCAGCTCCACCTaGTCCCTCCCAATCGGAAGG +
Preference number: 5 (lower is better)
Translates to: VLHLHALRGHPQHRVSHATSSST*SLPIGR
Trigger: CCTTCCGATTGGGAGGGACAAGGTGGAGCTGGAGGT...CGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAAGAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp CCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGTTGAAGATGCGATCCTaGCCTTCTCCTGGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: PALSRGTWVSHARGTRASLKMRS*PSPGSV
Trigger: CACGCTGCCAGGAGAAGGCAAGGATCGCATCTTCAA...CGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGATTCACGCCTCCCAGCTaGACGTTGATCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGFTPPS*TLIFRQ
Trigger: CTGCCTGAAGATCAACGTCAAGCTGGGAGGCGTGAA...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGTTCACGCCTCCCAGCTaGACGTTGATCTTCAGGCAG +
Preference number: 5 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTFTPPS*TLIFRQ
Trigger: CTGCCTGAAGATCAACGTCAAGCTGGGAGGCGTGAA...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GTAGAGGATGGAGGGCGGCTGCAGCACCCGCCCAGTCACGTCTGTCATCTCATCAGTGCGAAGGCCTGCTaGTCCCCTGGATGCCAGCGT +
Preference number: 5 (lower is better)
Translates to: VEDGGRLQHPPSHVCHLISAKAC*SPGCQR
Trigger: ACGCTGGCATCCAGGGGACAAGCAGGCCTTCGCACT...GATGAGATGACAGACGTGACTGGGCGGGTGCTGCAGCCGCCCTCCATCCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAACAGAGCCACGTGTaGCATTCATGTCACTTCTCC +
Preference number: 5 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPQQSHV*HSCHFS
Trigger: GGAGAAGTGACATGAATGCAACACGTGGCTCTGTTG...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGACCTGAAACGAGGCCCTaGGAGCTGCTCAGCTTCTTA +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGPETRP*ELLSFL
Trigger: TAAGAAGCTGAGCAGCTCCAAGGGCCTCGTTTCAGG...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS GCA 90 bp GACGGCCAAGACTCTGTCCGAAGGGGACTCCCGGCCTTACCTGGATaGCAGCGTGACTACACAGGTAGAAGTCGAACTCGGTGGGGTGGG +
Preference number: 5 (lower is better)
Translates to: DGQDSVRRGLPALPG*QRDYTGRSRTRWGG
Trigger: CCCACCCCACCGAGTTCGACTTCTACCTGTGTAGTCACGCTGGCATCCAGGTAAGGCCGGGAGTCCCCTTCGGACAGAGTCTTGGCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519347.1
CDS-3UTR CAA 90 bp GTTCTTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGTTGAAGATGCGATCCTaGCCTTCTCCTGGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: VLHLHALRGHPQHRVSHALKMRS*PSPGSV
Trigger: CACGCTGCCAGGAGAAGGCAAGGATCGCATCTTCAA...CGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCAGCCCCCTGCGCGTATTaGCAGAAGCACGGCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIAAPCAY*QKHGWP
Trigger: GGGCCAGCCGTGCTTCTGCAAATACGCGCAGGGGGC...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAATTGCAGTGTCTCCCACGCGCTaGACCTCGGCGTACACGGGC +
Preference number: 5 (lower is better)
Translates to: RCTVSTGEAGCCHIKSIAVSPTR*TSAYTG
Trigger: GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACAC...TGCAATTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTCGCCTTGGCCAGTGCTaGGTGGTCTCGCCCGTTACT +
Preference number: 5 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVRLGQC*VVSPVT
Trigger: AGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCG...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAGGCACCACCAGCTTCTaGGGACAGAGGGACCTGCCG +
Preference number: 5 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTGTTSF*GQRDLP
Trigger: CGGCAGGTCCCTCTGTCCCAAGAAGCTGGTGGTGCC...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGACAAGACCACCAGGCTTaGCTGATGGTCATGGTCAAT +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGQDHQA*LMVMVN
Trigger: ATTGACCATGACCATCAGCAAAGCCTGGTGGTCTTG...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGTCCCCCGCTCGTTCTaGTCAGTGCAGAAGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LAVTEGLAICWSECSWSRVPRSF*SVQKSR
Trigger: CCGGCTCTTCTGCACTGACAAGAACGAGCGGGGGAC...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519980.5
CDS-3UTR CAA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGACGCAGGACACCCACTaGATGGACACCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLTQDTH*MDTLKM
Trigger: CATCTTCAAGGTGTCCATCAAGTGGGTGTCCTGCGT...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTCCCGTGTGGAACTGCTaGTTCCGCATGTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVPVWNC*FRMSQT
Trigger: CGTCTGGGACATGCGGAACAAGCAGTTCCACACGGG...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp TGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTCCCGTGTGGAACTGCTaGTTCCGCATGTCCCAGACG +
Preference number: 5 (lower is better)
Translates to: WPVLGGLARYSAQRYGFLPVWNC*FRMSQT
Trigger: CGTCTGGGACATGCGGAACAAGCAGTTCCACACGGG...AAGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACAGTGTCTCCCACGCGCTaGACCTCGGCGTACACGGGC +
Preference number: 5 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTVSPTR*TSAYTG
Trigger: GCCCGTGTACGCCGAGGTCAAGCGCGTGGGAGACAC...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTCCTCAGTCGAGGAACTaGGGTGAGCCACGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: SCSMLAVTEGLAICWSECPQSRN*GEPRQG
Trigger: CCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGG...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTTTATTAAAATGGCACTaGTCTGCCAACCTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPLLKWH*SANLSG
Trigger: TCCAGAGAGGTTGGCAGACAAGTGCCATTTTAATAA...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACCTCAAAGACCATGCTTaGGAGAGCCACGGTAAGCGA +
Preference number: 5 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHLKDHA*ESHGKR
Trigger: TCGCTTACCGTGGCTCTCCAAAGCATGGTCTTTGAG...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTAAATTCCATGACCAATaGGACTTTTCTCCCACCTGT +
Preference number: 5 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPKFHDQ*DFSPTC
Trigger: ACAGGTGGGAGAAAAGTCCAATTGGTCATGGAATTT...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS TCA 90 bp GTGCAAGTGCTGCTCAGAGGCTTCCGAACTGGCCCAGGGGCCAGGTaGGAATGGGACTGTAACAGCTGCTGTGCAGGAAAATTGCCCGGT +
Preference number: 5 (lower is better)
Translates to: VQVLLRGFRTGPGAR*EWDCNSCCAGKLPG
Trigger: ACCGGGCAATTTTCCTGCACAGCAGCTGTTACAGTCCCATTCTCACCTGGCCCCTGGGCCAGTTCGGAAGCCTCTGAGCAGCACTTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524328.1
CDS-3UTR CAA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATTTTGCTAATCTCTTCTaGCCGATCGGGCGCCGACCT +
Preference number: 5 (lower is better)
Translates to: SRGTWVSHARGTRASPGNFANLF*PIGRRP
Trigger: AGGTCGGCGCCCGATCGGCAAGAAGAGATTAGCAAA...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGAACGTATGGATCTGTGTaGAAACTTGCACTTCGCATC +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGTYGSV*KLALRI
Trigger: GATGCGAAGTGCAAGTTTCAACACAGATCCATACGT...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTTGGGGCAGCAGGATGTaGTTCACGCCTCCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFWGSRM*FTPPSL
Trigger: CAAGCTGGGAGGCGTGAACAACATCCTGCTGCCCCA...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACACGCCTTGGCCAGTGCTaGGTGGTCTCGCCCGTTACT +
Preference number: 5 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTRLGQC*VVSPVT
Trigger: AGTAACGGGCGAGACCACCAAGCACTGGCCAAGGCG...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTCAGCACTGTCATGTTCCTTACCTCAGTCGAGGAACTaGGGTGAGCCACGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: RPLLCPEVWLPSALSCSLPQSRN*GEPRQG
Trigger: CCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGG...TAAGGAACATGACAGTGCTGAAGGAAGCCATACCTCTGGGCAGAGTAACGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS GCA 90 bp AAAGGGACGCTGGGCAGCCGCCCTGAAAGTGCATCGTGTAACGCCTaGAAGCTCACGCAGGACACCCACTTGATGGACACCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: KGTLGSRPESASCNA*KLTQDTHLMDTLKM
Trigger: CATCTTCAAGGTGTCCATCAAGTGGGTGTCCTGCGTGAGCTTGCAGGCGTTACACGATGCACTTTCAGGGCGGCTGCCCAGCGTCCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCCTGCAGCGGGAATGTTaGGTGACTGGCGGGCCGCCG +
Preference number: 5 (lower is better)
Translates to: NKINDVSCSMLAVTEGLALQREC*VTGGPP
Trigger: CGGCGGCCCGCCAGTCACCAAACATTCCCGCTGCAG...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCATCTTCAGGCAGAGGTaGGACAGGGTCTGTGGCGTG +
Preference number: 5 (lower is better)
Translates to: CSMLAVTEGLAICWSECSIFRQR*DRVCGV
Trigger: CACGCCACAGACCCTGTCCAACCTCTGCCTGAAGAT...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATGGGGCAGCAGGATGTaGTTCACGCCTCCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: EPRQGHTSIAWKSTLVTTWGSRM*FTPPSL
Trigger: CAAGCTGGGAGGCGTGAACAACATCCTGCTGCCCCA...TGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GCGGTGCTGGCAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTAAGTTTCATGTGGAGTaGTATCTCACTGTTTGGTTA +
Preference number: 5 (lower is better)
Translates to: AVLAEHGTCGRLCMATGPKFHVE*YLTVWL
Trigger: TAACCAAACAGTGAGATACAACTCCACATGAAACTT...AGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTGCCAGCACCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCAACCTCCAGCTCCACCTaGTCCCTCCCAATCGGAAGG +
Preference number: 5 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSTSSST*SLPIGR
Trigger: CCTTCCGATTGGGAGGGACAAGGTGGAGCTGGAGGT...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp AGATTTTGCCACACCTGCGCAGGCTCCTGCCAGCCTGAAGGATGGCATGCCGTTACGCAGGACACCCACTaGATGGACACCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: RFCHTCAGSCQPEGWHAVTQDTH*MDTLKM
Trigger: CATCTTCAAGGTGTCCATCAAGTGGGTGTCCTGCGT...AACGGCATGCCATCCTTCAGGCTGGCAGGAGCCTGCGCAGGTGTGGCAAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CTGCCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGGTTCAAAATCCAAGTTaGAAATCTGGGACGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LPLLLSSGRVKGGAGRTRVQNPS*KSGTEG
Trigger: GCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAAC...CCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CGTCCAGGGCCTGGATCGTCTCAAAAGGGACGCTGGGCAGCCGCCCTGAAAGTGGTTCAAAATCCAAGTTaGAAATCTGGGACGGAAGGC +
Preference number: 5 (lower is better)
Translates to: RPGPGSSQKGRWAAALKVVQNPS*KSGTEG
Trigger: GCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAAC...CACTTTCAGGGCGGCTGCCCAGCGTCCCTTTTGAGACGATCCAGGCCCTGGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp CCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAACATCAAACAGGACGGTGGCTTaGCGTCACCGAAGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: PRQGHTSIAWKSTLVTTSNRTVA*RHRRAH
Trigger: GTGAGCCCTTCGGTGACGCAAAGCCACCGTCCTGTT...TGATGTTGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACACTGGCAGAGGTGGACTaGGTCAGGGTATGGGAGAAA +
Preference number: 5 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTLAEVD*VRVWEK
Trigger: TTTCTCCCATACCCTGACCAAGTCCACCTCTGCCAG...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CCACCAGGTAGGTCAGGAGAGATGAAATCGACAACAGTCCGTTTGCTGCTTATGCTCCCTCTGCAGCCGTaGCCTCTGTGGAGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: PPGRSGEMKSTTVRLLLMLPLQP*PLWRER
Trigger: CCTCTCCCTCCACAGAGGCAACGGCTGCAGAGGGAG...CATAAGCAGCAAACGGACTGTTGTCGATTTCATCTCTCCTGACCTACCTGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTAGTGCGAAGGCCTGCTaGTCCCCCGCTCGTTCTTGT +
Preference number: 5 (lower is better)
Translates to: INDVSCSMLAVTEGLAICSAKAC*SPARSC
Trigger: ACAAGAACGAGCGGGGGACAAGCAGGCCTTCGCACT...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000519980.5
CDS-3UTR CAA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCAACTTGTGCCTGTCCTaGAAATACTGGGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: VTEGLAICWSECSWSRESNLCLS*KYWATV
Trigger: CACGGTGGCCCAGTATTTCAAGGACAGGCACAAGTT...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTTTTGCTAATCTCTTCTaGCCGATCGGGCGCCGACCT +
Preference number: 5 (lower is better)
Translates to: SCSMLAVTEGLAICWSECFANLF*PIGRRP
Trigger: AGGTCGGCGCCCGATCGGCAAGAAGAGATTAGCAAA...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAAGCACTTCGCATCAATTaGCTAATCTCTTCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: QSRNLGEPRQGHTSIAWKALRIN*LISSCR
Trigger: TCGGCAAGAAGAGATTAGCAAATTGATGCGAAGTGC...TTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CAGAACACGGCACCTGCGGACGCCTCTGCATGGCCACCGGCCCTCAGTCGAGGATCTGTCATCTCATCTTaGACCATGATTCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: QNTAPADASAWPPALSRGSVISS*TMIPNS
Trigger: TGAATTTGGAATCATGGTCAAAGATGAGATGACAGA...TCCTCGACTGAGGGCCGGTGGCCATGCAGAGGCGTCCGCAGGTGCCGTGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp ATGGCCACCGGCCCTCAGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGTCTGTCATCTCATCTTaGACCATGATTCCAAATTCA +
Preference number: 5 (lower is better)
Translates to: MATGPQSRNLGEPRQGHTSVISS*TMIPNS
Trigger: TGAATTTGGAATCATGGTCAAAGATGAGATGACAGA...CGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACTGAGGGCCGGTGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGGGCTGAAAAACTTCTaGCTGGGTGTGACACAGGGT +
Preference number: 5 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSGLKNF*LGVTQG
Trigger: ACCCTGTGTCACACCCAGCAAGAAGTTTTTCAGCCC...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GACCGAGTGCGTCCCCCGCGGCTCCAGACTGCATGGCATCACAGTTTACAAGTCTGGTTTCTCAGGCCATaGGCCAAGAAACTGCTCAAT +
Preference number: 5 (lower is better)
Translates to: DRVRPPRLQTAWHHSLQVWFLRP*AKKLLN
Trigger: ATTGAGCAGTTTCTTGGCCAATGGCCTGAGAAACCA...GACTTGTAAACTGTGATGCCATGCAGTCTGGAGCCGCGGGGGACGCACTCGGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCGTCACGCGTGTCTGTTaGGCTTTGAAGAGGAACTGG +
Preference number: 5 (lower is better)
Translates to: VTEGLAICWSECSWSRESVTRVC*ALKRNW
Trigger: CCAGTTCCTCTTCAAAGCCAAACAGACACGCGTGAC...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CCACTGCTCCTTAGTTCAGGCCGGGTGAAGGGCGGTGCTGGCAGAACACGGCACTGCATGGTTTCTATATaGCAAGCACAAGACATGGTC +
Preference number: 5 (lower is better)
Translates to: PLLLSSGRVKGGAGRTRHCMVSI*QAQDMV
Trigger: GACCATGTCTTGTGCTTGCAATATAGAAACCATGCA...GTGCCGTGTTCTGCCAGCACCGCCCTTCACCCGGCCTGAACTAAGGAGCAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS CCA 90 bp TCGATATCCGTGTCTGGACCTTGTCCCTCCCAATCGGAAGGGGCATaGCTGTGTATAGATTCTTCCTGCCGTCAAACACGGGCTTCCGAT +
Preference number: 5 (lower is better)
Translates to: SISVSGPCPSQSEGA*LCIDSSCRQTRASD
Trigger: ATCGGAAGCCCGTGTTTGACGGCAGGAAGAATCTATACACAGCCATGCCCCTTCCGATTGGGAGGGACAAGGTCCAGACACGGATATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517293.5
CDS CCA 90 bp ACGTCTTTTACAGGCTCAGCCGGGAGTAGAAAGGATTCTCCTGCATaGAACACAGTCTACACCGCGGGCGATAGCTCAGAACCTGAGAGG +
Preference number: 5 (lower is better)
Translates to: TSFTGSAGSRKDSPA*NTVYTAGDSSEPER
Trigger: CCTCTCAGGTTCTGAGCTATCGCCCGCGGTGTAGACTGTGTTCCATGCAGGAGAATCCTTTCTACTCCCGGCTGAGCCTGTAAAAGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521325.1
CDS-3UTR CAA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTACGCAGGACACCCACTaGATGGACACCTTGAAGATG +
Preference number: 5 (lower is better)
Translates to: SCSMLAVTEGLAICWSECTQDTH*MDTLKM
Trigger: CATCTTCAAGGTGTCCATCAAGTGGGTGTCCTGCGT...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp TTCATCTGCACGCACTGCGTGGCCATCCCCAGCACCGTGTCTCCCACGCGCTTGCCTTGTAAAACGCTGTaGCTGACACATCAATATTCA +
Preference number: 5 (lower is better)
Translates to: FICTHCVAIPSTVSPTRLPCKTL*LTHQYS
Trigger: TGAATATTGATGTGTCAGCAACAGCGTTTTACAAGG...CAAGCGCGTGGGAGACACGGTGCTGGGGATGGCCACGCAGTGCGTGCAGATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp GTACACGCTGCACAGTCTCCACGGGGGAAGCGGGTTGCTGTCACATTAAGTCAAAACTTGTGCCTGTCCTaGAAATACTGGGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: VHAAQSPRGKRVAVTLSQNLCLS*KYWATV
Trigger: CACGGTGGCCCAGTATTTCAAGGACAGGCACAAGTT...TTGACTTAATGTGACAGCAACCCGCTTCCCCCGTGGAGACTGTGCAGCGTGTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATGGAAGAAACACACCTTaGAGACACATGGTTCCAGAT +
Preference number: 5 (lower is better)
Translates to: SRGTWVSHARGTRASPGNGRNTP*RHMVPD
Trigger: ATCTGGAACCATGTGTCTCAAAGGTGTGTTTCTTCC...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACATCCAACAGTTCCCTCTaGGGCAAGCTGTACAATGGT +
Preference number: 5 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTSNSSL*GKLYNG
Trigger: ACCATTGTACAGCTTGCCCAAGAGGGAACTGTTGGA...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCAAAATGTCGTATGGCTaGTCTGGGCCACTGGGATTG +
Preference number: 5 (lower is better)
Translates to: CSMLAVTEGLAICWSECSKMSYG*SGPLGL
Trigger: CAATCCCAGTGGCCCAGACAAGCCATACGACATTTT...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTAAACTCATGGAGAAATaGGGGCGAGCGCTAACCTCA +
Preference number: 5 (lower is better)
Translates to: DVSCSMLAVTEGLAICWSKLMEK*GRALTS
Trigger: TGAGGTTAGCGCTCGCCCCAATTTCTCCATGAGTTT...AGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp TCCCCTGGATGCCAGCGTGACTACACAGGTAGAAGTCGAACTCGGTGGGGTGGGGGTAAACTTTACCCTTaGGGAATCTGTCAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SPGCQRDYTGRSRTRWGGGKLYP*GICQRF
Trigger: AAACCTCTGACAGATTCCCAAAGGGTAAAGTTTACC...CCCACCCCACCGAGTTCGACTTCTACCTGTGTAGTCACGCTGGCATCCAGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp ATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTAACTTGTGCCTGTCCTaGAAATACTGGGCCACCGTG +
Preference number: 5 (lower is better)
Translates to: INDVSCSMLAVTEGLAICNLCLS*KYWATV
Trigger: CACGGTGGCCCAGTATTTCAAGGACAGGCACAAGTT...ACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp TGGCCAGTGCTTGGTGGTCTCGCCCGTTACTCTGCCCAGAGGTATGGCTTCCTTACGTATGGATCTGTGTaGAAACTTGCACTTCGCATC +
Preference number: 5 (lower is better)
Translates to: WPVLGGLARYSAQRYGFLTYGSV*KLALRI
Trigger: GATGCGAAGTGCAAGTTTCAACACAGATCCATACGT...AAGGAAGCCATACCTCTGGGCAGAGTAACGGGCGAGACCACCAAGCACTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523609.5
CDS-3UTR CAA 90 bp AGTCGAGGAACTTGGGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATAACCACACTTGTGTTTaGTGTTGCTTTCACTCTCAG +
Preference number: 5 (lower is better)
Translates to: SRGTWVSHARGTRASPGNNHTCV*CCFHSQ
Trigger: CTGAGAGTGAAAGCAACACAAAACACAAGTGTGGTT...ATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACCCAAGTTCCTCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTCATAAGAGATGGGTCTaGCACCAATCTCCTGCAATC +
Preference number: 5 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFHKRWV*HQSPAI
Trigger: GATTGCAGGAGATTGGTGCAAGACCCATCTCTTATG...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp AATAAAATCAATGACGTCTCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCGTCCTGGGGAGCCAATaGCCCGGCACGTCTTATTAC +
Preference number: 5 (lower is better)
Translates to: NKINDVSCSMLAVTEGLAVLGSQ*PGTSYY
Trigger: GTAATAAGACGTGCCGGGCAATTGGCTCCCCAGGAC...GGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGAGACGTCATTGATTTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CGGGCTCTCTGGAGAGACCAGAGGCTCGGGCTGCCTGATTTCAGCAACACATTTAAATTGGCCTGTAATTaGATTGTTCTCCCGGAGGTC +
Preference number: 5 (lower is better)
Translates to: RALWRDQRLGLPDFSNTFKLACN*IVLPEV
Trigger: GACCTCCGGGAGAACAATCAAATTACAGGCCAATTT...AAATGTGTTGCTGAAATCAGGCAGCCCGAGCCTCTGGTCTCTCCAGAGAGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAAAATTGGCCTGTAATTaGATTGTTCTCCCGGAGGTC +
Preference number: 5 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTKLACN*IVLPEV
Trigger: GACCTCCGGGAGAACAATCAAATTACAGGCCAATTT...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000220592.10
ENST00000519980.5
CDS-3UTR CAA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAGCACTTCGCATCAATTaGCTAATCTCTTCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTALRIN*LISSCR
Trigger: TCGGCAAGAAGAGATTAGCAAATTGATGCGAAGTGC...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCGCACTTCGCATCAATTaGCTAATCTCTTCTTGCCGA +
Preference number: 5 (lower is better)
Translates to: CSMLAVTEGLAICWSECSALRIN*LISSCR
Trigger: TCGGCAAGAAGAGATTAGCAAATTGATGCGAAGTGC...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp GGTGAGCCACGCCAGGGGCACACGAGCATCGCCTGGAAATCAACTTTAGTGACAGGCTCCAAAACACTCTaGATATGCCAAACAGATCAC +
Preference number: 5 (lower is better)
Translates to: GEPRQGHTSIAWKSTLVTGSKTL*ICQTDH
Trigger: GTGATCTGTTTGGCATATCAAGAGTGTTTTGGAGCC...TGTCACTAAAGTTGATTTCCAGGCGATGCTCGTGTGCCCCTGGCGTGGCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp CTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTCCAATTACGTCTGCATaGTCTTTGAAACCATGCAAC +
Preference number: 5 (lower is better)
Translates to: LAVTEGLAICWSECSWSRPITSA*SLKPCN
Trigger: GTTGCATGGTTTCAAAGACAATGCAGACGTAATTGG...ACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS GCA 90 bp AGGAGAAACGATTGTCGTCCCAGAGGACGTGATAGTGCGAAGGCCTaGTTGTCCCCTAAAGCAGATCAGAAGATTAGACAGTTGGACTCG +
Preference number: 5 (lower is better)
Translates to: RRNDCRPRGRDSAKA*LSPKADQKIRQLDS
Trigger: CGAGTCCAACTGTCTAATCTTCTGATCTGCTTTAGGGGACAAGCAGGCCTTCGCACTATCACGTCCTCTGGGACGACAATCGTTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520628.1
CDS-3UTR CAA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATGCAATGGCCCACACCTaGATCTCGATGCCCGTGTGG +
Preference number: 5 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHAMAHT*ISMPVW
Trigger: CCACACGGGCATCGAGATCAAGGTGTGGGCCATTGC...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp TCATGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTGTTCAAAATCCAAGTTaGAAATCTGGGACGGAAGGC +
Preference number: 5 (lower is better)
Translates to: SCSMLAVTEGLAICWSECVQNPS*KSGTEG
Trigger: GCCTTCCGTCCCAGATTTCAAACTTGGATTTTGAAC...ACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220592.10
ENST00000519980.5
ENST00000523609.5
CDS-3UTR CAA 90 bp TGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCCACTCGGTACACATGCTGTGGGGTGTTCTaGGGATCAACTCACTCATTT +
Preference number: 5 (lower is better)
Translates to: WPSVGLSVAGLVNPTRYTCCGVF*GSTHSF
Trigger: AAATGAGTGAGTTGATCCCAAGAACACCCCACAGCA...TGTGTACCGAGTGGGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp TGTTCGATGCTGGCTGTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCGAAAATGAGGCGAACTaGTCCTTCATAAATGGTCAA +
Preference number: 5 (lower is better)
Translates to: CSMLAVTEGLAICWSECSENEAN*SFINGQ
Trigger: TTGACCATTTATGAAGGACAAGTTCGCCTCATTTTC...GCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGACAGCCAGCATCGAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp GTCACGGAAGGGCTGGCCATCTGTTGGTCTGAGTGTAGCTGGTCTCGTGAATCCACCTTCTGTAGTGATTaGGCTAAGCCAATACATTCA +
Preference number: 5 (lower is better)
Translates to: VTEGLAICWSECSWSRESTFCSD*AKPIHS
Trigger: TGAATGTATTGGCTTAGCCAAATCACTACAGAAGGT...GGATTCACGAGACCAGCTACACTCAGACCAACAGATGGCCAGCCCTTCCGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp ACATGGTCACATGGTTCCACTGTACAGGTAGAAACAAGCCCACAGACAATACATAGGTCCACGCCTGCCTaGTGGAATGGCACAGGCTTA +
Preference number: 5 (lower is better)
Translates to: TWSHGSTVQVETSPQTIHRSTPA*WNGTGL
Trigger: TAAGCCTGTGCCATTCCACAAGGCAGGCGTGGACCT...ATGTATTGTCTGTGGGCTTGTTTCTACCTGTACAGTGGAACCATGTGACCATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220592.10
CDS-3UTR CAA 90 bp AATCCAAGTTTGAAATCTGGGACGGAAGGCATTCTGGAAAACGGAGAATCTAATACCTCCAGCTCCACCTaGTCCCTCCCAATCGGAAGG +
Preference number: 5 (lower is better)
Translates to: NPSLKSGTEGILENGESNTSSST*SLPIGR
Trigger: CCTTCCGATTGGGAGGGACAAGGTGGAGCTGGAGGT...ATTAGATTCTCCGTTTTCCAGAATGCCTTCCGTCCCAGATTTCAAACTTGGATT
49% GC, longest homopolymer 4 nt, total homopolyme