RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGO1 (Homo sapiens)

Ensembl gene IDs: ENSG00000092847

Ensembl transcript IDs: ENST00000373204.6, ENST00000373206.5, ENST00000635259.1, ENST00000674304.1, ENST00000674426.1

Found 1559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGTCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTaGTCTTCTGCAGTCAAGGAGCTAAGCCTGACCCTGCCAGCTAAC +
Preference number: 1 (lower is better)
Translates to: QSSPGGHLWAWGTGS*SSAVKELSLTLPAN
Trigger: GTTAGCTGGCAGGGTCAGGCTTAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR TCA 90 bp ACTTCCACCTTCAGGCCCTTGATCTCCTTGGTGAAGCGAACGCGCTaGGAGTCCGTGAGGGGCTTGGGCTGCTCATCTATGTTCCTGATG +
Preference number: 1 (lower is better)
Translates to: TSTFRPLISLVKRTR*ESVRGLGCSSMFLM
Trigger: CATCAGGAACATAGATGAGCAGCCCAAGCCCCTCACGGACTCTCAGCGCGTTCGCTTCACCAAGGAGATCAAGGGCCTGAAGGTGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR GCA 90 bp CTCCTTTCCAGGGTGAAAACGCACGGCGTAAATGGGCCCCGCCTGTaGTACAGCTATACTGGTTGGCTTCCAATTCTCCCAACGGGCCAA +
Preference number: 1 (lower is better)
Translates to: LLSRVKTHGVNGPRL*YSYTGWLPILPTGQ
Trigger: TTGGCCCGTTGGGAGAATTGGAAGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTCACCCTGGAAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 90 bp CCAACCTCCCTAACCCTTGCTGCTGAAAAGAAGCATGGGGCTGGCTaGCTCTTTCCCAAGGGAGTCTGCCAGATGATAGCCACAGGCCAA +
Preference number: 1 (lower is better)
Translates to: PTSLTLAAEKKHGAG*LFPKGVCQMIATGQ
Trigger: TTGGCCTGTGGCTATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTCAGCAGCAAGGGTTAGGGAGGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 90 bp TGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTaGGGTAACAGCGTTCTGCCTTCAAGCGAAGTACATGGTGCGCAG +
Preference number: 1 (lower is better)
Translates to: WVAQLLGLGKLSSIQ*GNSVLPSSEVHGAQ
Trigger: CTGCGCACCATGTACTTCGCTTGAAGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTaGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTT +
Preference number: 1 (lower is better)
Translates to: TKGCSSAALPLQGRH*LPTSGRKEDRVVSL
Trigger: AAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR TCA 90 bp CCAATCTGCTCTTCAAGTTCAACCAACCTCCCTAACCCTTGCTGCTaGAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTG +
Preference number: 1 (lower is better)
Translates to: PICSSSSTNLPNPCC*KEAWGWLALSQGSL
Trigger: CAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTCAGCAGCAAGGGTTAGGGAGGTTGGTTGAACTTGAAGAGCAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 90 bp CCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTaGCATAGTGCCTTAAGTATTACTAGGGGCTGGATGTCTGTCAGG +
Preference number: 1 (lower is better)
Translates to: PAGGRKTGSCHFKAK*HSALSITRGWMSVR
Trigger: CCTGACAGACATCCAGCCCCTAGTAATACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR TCA 90 bp CCGGCAGCACTCGCCCTGTCACCTCCGTCATGTCATCCTTCACTTTaGTCCCAAATTCCTGGATGTAGGGATCTAAGTTGTAGCTGGCAT +
Preference number: 1 (lower is better)
Translates to: PAALALSPPSCHPSL*SQIPGCRDLSCSWH
Trigger: ATGCCAGCTACAACTTAGATCCCTACATCCAGGAATTTGGGATCAAAGTGAAGGATGACATGACGGAGGTGACAGGGCGAGTGCTGCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CCA 90 bp AGCTGGTCTGTGAAGTTCTTGAGCACCTCTTCTCGACACTGTTTTTaGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCA +
Preference number: 1 (lower is better)
Translates to: SWSVKFLSTSSRHCF*GAKQAMAQTLISIP
Trigger: TGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGAAGAGGTGCTCAAGAACTTCACAGACCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR GCA 90 bp CTTCTTGACACAGCTGCTTTGAAGGAGTACTTCTGTCATGCTGTGTaGCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGG +
Preference number: 1 (lower is better)
Translates to: LLDTAALKEYFCHAV*LLSRPRHFSAYHQR
Trigger: CCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCACACAGCATGACAGAAGTACTCCTTCAAAGCAGCTGTGTCAAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 90 bp GTCTGTGAAGTTCTTGAGCACCTCTTCTCGACACTGTTTTTGGGGTaGGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTA +
Preference number: 1 (lower is better)
Translates to: VCEVLEHLFSTLFLG*EAGDGPDFDLNPIV
Trigger: TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGAAGAGGTGCTCAAGAACTTCACAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR GCA 90 bp AGAAGGAAGGATGCTCAACCAGTAATGAAAAGGAATGCCCAGAGGTaGCAGGACAAGCCTTCACTGAAAACCTTGAGCTCCAGGACCAAA +
Preference number: 1 (lower is better)
Translates to: RRKDAQPVMKRNAQR*QDKPSLKTLSSRTK
Trigger: TTTGGTCCTGGAGCTCAAGGTTTTCAGTGAAGGCTTGTCCTGGCACCTCTGGGCATTCCTTTTCATTACTGGTTGAGCATCCTTCCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 90 bp TTGACAGAGCAGAAGGAAGGATGCTCAACCAGTAATGAAAAGGAATaGCCAGAGGTGCCAGGACAAGCCTTCACTGAAAACCTTGAGCTC +
Preference number: 1 (lower is better)
Translates to: LTEQKEGCSTSNEKE*PEVPGQAFTENLEL
Trigger: GAGCTCAAGGTTTTCAGTGAAGGCTTGTCCTGGCACCTCTGGGCATTCCTTTTCATTACTGGTTGAGCATCCTTCCTTCTGCTCTGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 90 bp CTGAACAATGTAGCCAACCAGAACAGAACCTGGGATAGATTGTTTTaGATAGCAAATCCGGGTCATACAAGGGCAGCTAAGGGGAGGAAA +
Preference number: 1 (lower is better)
Translates to: LNNVANQNRTWDRLF*IANPGHTRAAKGRK
Trigger: TTTCCTCCCCTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCTATCCCAGGTTCTGTTCTGGTTGGCTACATTGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 90 bp GATCAATATCACTGGTCACTAATGAGCTACCAAATACTCAGTGCATaGAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATGTC +
Preference number: 1 (lower is better)
Translates to: DQYHWSLMSYQILSA*RKDRVASCRFKCHV
Trigger: GACATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTAGCTCATTAGTGACCAGTGATATTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 90 bp GGACCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTaGCTTGGTAGCCCTTTGCCCAGTCTGTTATTTATTTACTACTTG +
Preference number: 1 (lower is better)
Translates to: GPPIYGGAPVSLLQY*LGSPLPSLLFIYYL
Trigger: CAAGTAGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 90 bp GGACTTTCTACTCCTAGGCTTCTTGTGTTAGACAAGAAACATCACTaGATGAGGAGAGCAACTGAGTACAATCCTCTCACATGGGCCAAG +
Preference number: 1 (lower is better)
Translates to: GLSTPRLLVLDKKHH*MRRATEYNPLTWAK
Trigger: CTTGGCCCATGTGAGAGGATTGTACTCAGTTGCTCTCCTCATCCAGTGATGTTTCTTGTCTAACACAAGAAGCCTAGGAGTAGAAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 90 bp TTCTACCCTGATGGGGAAGAAACGTCCAACCTTGTTAGTTACACATaGTTCCAGGTCCAAAACTGTCCCACCAGCCTTACAGATATCCTA +
Preference number: 1 (lower is better)
Translates to: FYPDGEETSNLVSYT*FQVQNCPTSLTDIL
Trigger: TAGGATATCTGTAAGGCTGGTGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTTCCCCATCAGGGTAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 90 bp CTGCTGCTGATGTTGCTTGCTTCAGAAGGAACTGTACATTACAGCTaGTGGGATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAG +
Preference number: 1 (lower is better)
Translates to: LLLMLLASEGTVHYS*WDNFTMDWTRYSSK
Trigger: CTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTATCCCAGCAGCTGTAATGTACAGTTCCTTCTGAAGCAAGCAACATCAGCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 90 bp CTGCTGATGTTGCTTGCTTCAGAAGGAACTGTACATTACAGCTGCTaGGATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAG +
Preference number: 1 (lower is better)
Translates to: LLMLLASEGTVHYSC*DNFTMDWTRYSSKQ
Trigger: CTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTATCCCAGCAGCTGTAATGTACAGTTCCTTCTGAAGCAAGCAACATCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 90 bp AAACATCACTGGATGAGGAGAGCAACTGAGTACAATCCTCTCACATaGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTT +
Preference number: 1 (lower is better)
Translates to: KHHWMRRATEYNPLT*AKIRVNWAPEFKSL
Trigger: AAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGTACTCAGTTGCTCTCCTCATCCAGTGATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 90 bp ACGTTTTGTGAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCTaGGATAGATTGTTTTGCATAGCAAATCCGGGTCATACAAGGGCA +
Preference number: 1 (lower is better)
Translates to: TFCELLNNVANQNRT*DRLFCIANPGHTRA
Trigger: TGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCTATCCCAGGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR TCA 90 bp ACAGAAATAGTACAAAATCTCAGGTGCAGAGAAATCAGTGCGCTCTaGAAGTTGAACCTCCTCAGGAGCCATCAAATACCCAGTGCAAAA +
Preference number: 1 (lower is better)
Translates to: TEIVQNLRCREISAL*KLNLLRSHQIPSAK
Trigger: TTTTGCACTGGGTATTTGATGGCTCCTGAGGAGGTTCAACTTTCAGAGCGCACTGATTTCTCTGCACCTGAGATTTTGTACTATTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 90 bp GGAAGACAAAGAGGTTTGAAGGATTCTGCCAAAGGCAAAGCTGTATaGGGCTCTCTCCTGACTACATGTACACCCTATATTTGGATAACT +
Preference number: 1 (lower is better)
Translates to: GRQRGLKDSAKGKAV*GSLLTTCTPYIWIT
Trigger: AGTTATCCAAATATAGGGTGTACATGTAGTCAGGAGAGAGCCTCATACAGCTTTGCCTTTGGCAGAATCCTTCAAACCTCTTTGTCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 90 bp TTCGTTGTTGTAGCCTTATTCCACTCCCTCATTATCTTCCTCCTATaGCAGGGGACTATTTGGCTAATCATATCCCCCACCAAACTTAAT +
Preference number: 1 (lower is better)
Translates to: FVVVALFHSLIIFLL*QGTIWLIISPTKLN
Trigger: ATTAAGTTTGGTGGGGGATATGATTAGCCAAATAGTCCCCTGGCATAGGAGGAAGATAATGAGGGAGTGGAATAAGGCTACAACAACGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 90 bp CTTCAGAAGGAACTGTACATTACAGCTGCTGGGATAATTTCACAATaGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATC +
Preference number: 1 (lower is better)
Translates to: LQKELYITAAGIISQ*TGQGTAQSRTQTQI
Trigger: GATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTATCCCAGCAGCTGTAATGTACAGTTCCTTCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 90 bp AAGAAATACAGAAATAGTACAAAATCTCAGGTGCAGAGAAATCAGTaGGCTCTGAAAGTTGAACCTCCTCAGGAGCCATCAAATACCCAG +
Preference number: 1 (lower is better)
Translates to: KKYRNSTKSQVQRNQ*ALKVEPPQEPSNTQ
Trigger: CTGGGTATTTGATGGCTCCTGAGGAGGTTCAACTTTCAGAGCGCACTGATTTCTCTGCACCTGAGATTTTGTACTATTTCTGTATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 90 bp GAAGGAACTGTACATTACAGCTGCTGGGATAATTTCACAATGGACTaGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAA +
Preference number: 1 (lower is better)
Translates to: EGTVHYSCWDNFTMD*TRYSSKQDTNTNLK
Trigger: TTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTATCCCAGCAGCTGTAATGTACAGTTCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 90 bp AAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAAAGTaGCCTGCATATCCCTGCCATGATCAGATTTTAAGAAGGAAGGTA +
Preference number: 1 (lower is better)
Translates to: KYLLPNLLRRPNSKK*PAYPCHDQILRRKV
Trigger: TACCTTCCTTCTTAAAATCTGATCATGGCAGGGATATGCAGGGCACTTTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 90 bp GCTACTACACCAAGGGACTCAGTGCATTCAACAAATGTCTTTACTTaGACAATTCTTGGAGGGTTTCCTATTTTCCTCTGTAAAGAAGAA +
Preference number: 1 (lower is better)
Translates to: ATTPRDSVHSTNVFT*TILGGFPIFLCKEE
Trigger: TTCTTCTTTACAGAGGAAAATAGGAAACCCTCCAAGAATTGTGCAAGTAAAGACATTTGTTGAATGCACTGAGTCCCTTGGTGTAGTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 90 bp GAGAACAAATCAGGTACACAGTTCATTCTGATGGCTCAATGTTTCTaGGATATAAACTCATCAGGCATGGGAAGGATTTCCAAATTTTGG +
Preference number: 1 (lower is better)
Translates to: ENKSGTQFILMAQCF*DINSSGMGRISKFW
Trigger: CCAAAATTTGGAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATGAACTGTGTACCTGATTTGTTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 90 bp TATTTCTGCCTCACTCGGAGTCATAAATTTATGTCTTATTTCAACTaGTCAAAATCTGCTCCATGTCCAATCTGCTCTTCAAGTTCAACC +
Preference number: 1 (lower is better)
Translates to: YFCLTRSHKFMSYFN*SKSAPCPICSSSST
Trigger: GGTTGAACTTGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGAAATAAGACATAAATTTATGACTCCGAGTGAGGCAGAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTAACCCAACTAAGAGGATaGGGCTGGGGGTCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLTQLRG*GWGSPK
Trigger: CTTGGGGGACCCCCAGCCTCATCCTCTTAGTTGGGT...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAGGTGGGCACCAGTGCTaGCCCTTTTGGTCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLGGHQC*PFWSSG
Trigger: CCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACC...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCTTCCGGCCGCCGTACTaGAAGATGGGCGCCGGCAGC +
Preference number: 2 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPFRPPY*KMGAGS
Trigger: GCTGCCGGCGCCCATCTTGCAGTACGGCGGCCGGAA...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGCCTCCTTGCTTCCTCTaGATTTGGGTGGCACAGCTC +
Preference number: 2 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRPPCFL*IWVAQL
Trigger: GAGCTGTGCCACCCAAATCCAGAGGAAGCAAGGAGG...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGGGGCGCACAGACTGGTaGAAGCCGAACCAGACCTCG +
Preference number: 2 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWGRTDW*KPNQTS
Trigger: CGAGGTCTGGTTCGGCTTTCACCAGTCTGTGCGCCC...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCGTGAAGCGAACGCGCTaGGAGTCCGTGAGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPVKRTR*ESVRGL
Trigger: CAAGCCCCTCACGGACTCTCAGCGCGTTCGCTTCAC...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATAGGTGGGCACCAGTGCTaGCCCTTTTGGTCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMIGGHQC*PFWSSG
Trigger: CCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACC...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATGCTTCCTCTGGATTTaGGTGGCACAGCTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLCFLWI*VAQLLG
Trigger: CCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGCA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR CCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSARHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACCTTTCTTCTATCCAGTaGGGTAACAGCGTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHLSSIQ*GNSVLP
Trigger: AGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAG...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR TCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTCGCGCTGAGAGTCCGTaGGGGGCTTGGGCTGCTCAT +
Preference number: 2 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFRAESP*GAWAAH
Trigger: ATGAGCAGCCCAAGCCCCTCACGGACTCTCAGCGCG...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAGTATTACTAGGGGCTaGATGTCTGTCAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRSITRG*MSVREE
Trigger: CTCCTCCCTGACAGACATCCAGCCCCTAGTAATACT...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATATTACAGGGAAGGCACTaGTTACCCACCAGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMILQGRH*LPTSGR
Trigger: CCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAA...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTACAGGTAAAAGAGGCTaGGCCCAGTGGCTTGTGGCT +
Preference number: 2 (lower is better)
Translates to: ENARRKWAPPVLQLYWLATGKRG*AQWLVA
Trigger: AGCCACAAGCCACTGGGCCCAGCCTCTTTTACCTGT...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCACACCCTGATTGGGTGTaGCAATGGCCCGGTTCCGGC +
Preference number: 2 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAHPDWV*QWPGSG
Trigger: GCCGGAACCGGGCCATTGCCACACCCAATCAGGGTG...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCCCCAGACACCCTGATTaGGTGTGGCAATGGCCCGGT +
Preference number: 2 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPPRHPD*VWQWPG
Trigger: ACCGGGCCATTGCCACACCCAATCAGGGTGTCTGGG...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCGCTGGGAGTAGAGGCTaGCACCTGCTCCCTATGGAC +
Preference number: 2 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSAGSRG*HLLPMD
Trigger: GTCCATAGGGAGCAGGTGGCAGCCTCTACTCCCAGC...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATCAGAGATTTCTGGCTaGTGGTCTGTCTTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLSEISG*WSVLLA
Trigger: GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGCGCCGTACTGCAAGATaGGCGCCGGCAGCACTCGCC +
Preference number: 2 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKRRTAR*APAALA
Trigger: GGCGAGTGCTGCCGGCGCCCATCTTGCAGTACGGCG...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CAA 90 bp AGTATAAGCTTGAGGGCAGTCCAGCCCAGGTGGACATCTCTGGGCTaGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTAAGCCT +
Preference number: 2 (lower is better)
Translates to: SISLRAVQPRWTSLG*GNRFLVFCSQGAKP
Trigger: AGGCTTAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGACTGCCCTCAAGCTTATACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAACACTGCAATCTAGGATaGGCCAAAGGGTCAGAGGAC +
Preference number: 2 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQHCNLG*AKGSED
Trigger: GTCCTCTGACCCTTTGGCTCATCCTAGATTGCAGTG...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTAGGTGGGCACCAGTGCTaGCCCTTTTGGTCCAGTGGG +
Preference number: 2 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVGGHQC*PFWSSG
Trigger: CCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACC...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTATATGGTGGGCACCAGTaGTGCCCCTTTTGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELYGGHQ*CPFWSS
Trigger: ACTGGACCAAAAGGGGCAGCACTGGTGCCCACCATA...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTATCCAAGTGGAGAACATaGAGAGCCCACTGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELSKWRT*RAHCPR
Trigger: CCTGGGACAGTGGGCTCTGCATGTTCTCCACTTGGA...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACGCTGGGAGTAGAGGCTaGCACCTGCTCCCTATGGAC +
Preference number: 2 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHAGSRG*HLLPMD
Trigger: GTCCATAGGGAGCAGGTGGCAGCCTCTACTCCCAGC...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTATCCTCTGGATTTGGGTaGCACAGCTCCTGGGGCTTG +
Preference number: 2 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLSSGFG*HSSWGL
Trigger: CAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAGGA...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR CCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTACACCTGTGTGTATGGTaGGCACCAGTGCTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALHLCVW*APVLPL
Trigger: AAGGGGCAGCACTGGTGCCCACCATACACACAGGTG...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTGATGAGGAGAGCAACTaGGTACAATCCTCTCACATG +
Preference number: 2 (lower is better)
Translates to: ENARRKWAPPVLQLYWLADEESN*VQSSHM
Trigger: CATGTGAGAGGATTGTACTCAGTTGCTCTCCTCATC...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAAGGTTGGACAGAGTCTaGGGTGAGGTCTTGACCACG +
Preference number: 2 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKARLDRV*GEVLTT
Trigger: CGTGGTCAAGACCTCACCTCAGACTCTGTCCAACCT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTACACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 2 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR GCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTAGTAGAGGCTGCCACCTaGTCCCTATGGACATTTGCA +
Preference number: 2 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELVEAAT*SLWTFA
Trigger: TGCAAATGTCCATAGGGAGCAGGTGGCAGCCTCTAC...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTCAAATACTCAGTGCATaGAGGAAAGACAGAGTGGCC +
Preference number: 2 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAQILSA*RKDRVA
Trigger: GGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTG...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTATGCTTCCTCTGGATTTaGGTGGCACAGCTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVCFLWI*VAQLLG
Trigger: CCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGCA...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTACCTCCTTGCTTCCTCTaGATTTGGGTGGCACAGCTC +
Preference number: 2 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLPPCFL*IWVAQL
Trigger: GAGCTGTGCCACCCAAATCCAGAGGAAGCAAGGAGG...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 2 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGAGATTTCTGGCTGGTaGTCTGTCTTGCTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKEISGW*SVLLAL
Trigger: CAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFRHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCATTACAGGGAAGGCACTaGTTACCCACCAGCGGGCGG +
Preference number: 2 (lower is better)
Translates to: NSASSHLKTQTPFQGENALQGRH*LPTSGR
Trigger: CCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAA...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTCACGTATGTACACACTaGCTGCCACTGACGATTTCT +
Preference number: 2 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAHVCTH*LPLTIS
Trigger: AGAAATCGTCAGTGGCAGCCAGTGTGTACATACGTG...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAAGTATCTGGGGTAGCTaGCCTTCAGGCACCCCATCT +
Preference number: 2 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKASIWGS*PSGTPS
Trigger: AGATGGGGTGCCTGAAGGCCAGCTACCCCAGATACT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTCTGTCCACAGTGGGTaGCTTCCACCTTCAGGCCCT +
Preference number: 2 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGSVHSG*LPPSGP
Trigger: AGGGCCTGAAGGTGGAAGTCACCCACTGTGGACAGA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCACACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 2 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR GCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTACACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 2 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATGCTGGTGGTCTGTCTTaGTGGCCCTGTTCCCCACTC +
Preference number: 2 (lower is better)
Translates to: TILSHGPRLESTGHLSSNAGGLS*WPCSPL
Trigger: GAGTGGGGAACAGGGCCAGCAAGACAGACCACCAGC...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCATATGGTGGGCACCAGTaGTGCCCCTTTTGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPYGGHQ*CPFWSS
Trigger: ACTGGACCAAAAGGGGCAGCACTGGTGCCCACCATA...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATGCTTCCTCTGGATTTaGGTGGCACAGCTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVCFLWI*VAQLLG
Trigger: CCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGCA...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR CCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTCACCTGTGTGTATGGTaGGCACCAGTGCTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGHLCVW*APVLPL
Trigger: AAGGGGCAGCACTGGTGCCCACCATACACACAGGTG...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWRHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGGCCTGGACCCCATCTTaGGGCGATAACCACCCCCTC +
Preference number: 2 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLAWTPS*GDNHPL
Trigger: GAGGGGGTGGTTATCGCCCCAAGATGGGGTCCAGGC...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCAAGGAAGGATGGAGCCTaGACCCCATCTTGGGGCGAT +
Preference number: 2 (lower is better)
Translates to: NSASSHLKTQTPFQGENARKDGA*TPSWGD
Trigger: ATCGCCCCAAGATGGGGTCCAGGCTCCATCCTTCCT...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACTGCACAGAGGAAGGATaGAGCCTGGACCCCATCTTG +
Preference number: 2 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHCTEEG*SLDPIL
Trigger: CAAGATGGGGTCCAGGCTCCATCCTTCCTCTGTGCA...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAAATGGACAGGGCAGATaGAGTGTTAGCATCACTCTC +
Preference number: 2 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQNGQGR*SVSITL
Trigger: GAGAGTGATGCTAACACTCCATCTGCCCTGTCCATT...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTCAAAATGTATCCAAGTaGAGAACATGCAGAGCCCAC +
Preference number: 2 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAQNVSK*RTCRAH
Trigger: GTGGGCTCTGCATGTTCTCCACTTGGATACATTTTG...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCAAGCATGGGGCTGGCTaGCTCTTTCCCAAGGGAGTC +
Preference number: 2 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFKHGAG*LFPKGV
Trigger: GACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTT...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACCCCCAAGCACTTCCTTaGAGCTTGGGTAAGAAGCAC +
Preference number: 2 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHPQALP*SLGKKH
Trigger: GTGCTTCTTACCCAAGCTTCAAGGAAGTGCTTGGGG...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTATCTTCATCAGGCGACTaGTCTCCTCCTGTCTGTCTG +
Preference number: 2 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVSSSGD*SPPVCL
Trigger: CAGACAGACAGGAGGAGATCAGTCGCCTGATGAAGA...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAAGGACAAGTCTTCAATaGTCTCTTGCCGTGGTCGCT +
Preference number: 2 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKARTSLQ*SLAVVA
Trigger: AGCGACCACGGCAAGAGATCATTGAAGACTTGTCCT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTATGGTGGGCACCAGTaGTGCCCCTTTTGGTCCAGT +
Preference number: 2 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGYGGHQ*CPFWSS
Trigger: ACTGGACCAAAAGGGGCAGCACTGGTGCCCACCATA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCAAGGAATGCCCAGAGGTaGCAGGACAAGCCTTCACTG +
Preference number: 2 (lower is better)
Translates to: NSASSHLKTQTPFQGENARNAQR*QDKPSL
Trigger: CAGTGAAGGCTTGTCCTGGCACCTCTGGGCATTCCT...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCCTCAATCACTGGCTGTaGCTTATAAAAGGCAGTGGC +
Preference number: 2 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPLNHWL*LIKGSG
Trigger: GCCACTGCCTTTTATAAGGCACAGCCAGTGATTGAG...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTAGTGAGGGGCTTGGGCTaGTCATCTATGTTCCTGATG +
Preference number: 2 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVVRGLG*SSMFLM
Trigger: CATCAGGAACATAGATGAGCAGCCCAAGCCCCTCAC...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCACAGCTCCTGGGGCTTaGAAAGCTTTCTTCTATCCA +
Preference number: 2 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPTAPGA*KAFFYP
Trigger: TGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGT...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 2 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTATCAGAGATTTCTGGCTaGTGGTCTGTCTTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVSEISG*WSVLLA
Trigger: GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGA...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACTCAGAGATTTCTGGCTaGTGGTCTGTCTTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHSEISG*WSVLLA
Trigger: GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGA...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTGCCTGGACCCCATCTTaGGGCGATAACCACCCCCTC +
Preference number: 2 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIAAWTPS*GDNHPL
Trigger: GAGGGGGTGGTTATCGCCCCAAGATGGGGTCCAGGC...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAAACATAGTAATGGGATaGTCGGCTGGTGCCCTGGAT +
Preference number: 2 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKANIVMG*SAGALD
Trigger: ATCCAGGGCACCAGCCGACCATCCCATTACTATGTT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGGCAGGGCTACAGAGTTaGCCTTACCAAGCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWAGLQS*PYQAVK
Trigger: CTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGC...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATATTTGCAAATGCTGGTaGATGACTGGACCCTCCAGG +
Preference number: 2 (lower is better)
Translates to: ILSACRKDRVASCRFKCHICKCW*MTGPSR
Trigger: CCTGGAGGGTCCAGTCATTCACCAGCATTTGCAAAT...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCTGCCAGAAACCCTCCTaGCTTCACACAAGTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFCQKPS*LHTSWA
Trigger: TGCCCAACTTGTGTGAAGTCAGGAGGGTTTCTGGCA...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGCTGAGACATCAATGTTaGGCATCATCTTCCACATGG +
Preference number: 2 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWLRHQC*ASSSTW
Trigger: CCATGTGGAAGATGATGCTCAACATTGATGTCTCAG...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTGCTCATCTATGTTCCTaGTGTCCAGCACCTCACACA +
Preference number: 2 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFAHLCS*CPAPHT
Trigger: TGTGTGAGGTGCTGGACATCAGGAACATAGATGAGC...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTGGACAGAGTCTGAGGTaGGGTCTTGACCACGTTCTT +
Preference number: 2 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGGQSLR*GLDHVL
Trigger: AAGAACGTGGTCAAGACCTCACCTCAGACTCTGTCC...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 2 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR GCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAATGCCACCCACCCACATaGCCTAGTGGGAAACCAGGA +
Preference number: 2 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKCHPPT*PSGKPG
Trigger: TCCTGGTTTCCCACTAGGGCATGTGGGTGGGTGGCA...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTATGGATGATCTTACTTaGTTTGCCAATGACAGGAGT +
Preference number: 2 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAMDDLT*FANDRS
Trigger: ACTCCTGTCATTGGCAAAGCAAGTAAGATCATCCAT...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp TGCCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGGAATAAATGTGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 2 (lower is better)
Translates to: CLLSRPRHFSAYHQRNKCGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...ACATTTATTCCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGAGATTTCTGGCTGGTaGTCTGTCTTGCTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKEISGW*SVLLAL
Trigger: CAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTC...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp CAACACCACTTCTCCATCTGCATGCACCACCTTTCAAACAGGAATAATCTCAAGCACCTGTGTGTATGGTaGGCACCAGTGCTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: QHHFSICMHHLSNRNNLKHLCVW*APVLPL
Trigger: AAGGGGCAGCACTGGTGCCCACCATACACACAGGTG...CTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAATGGCTCAATGTTTCTaGGATATAAACTCATCAGGC +
Preference number: 2 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAMAQCF*DINSSG
Trigger: GCCTGATGAGTTTATATCCCAGAAACATTGAGCCAT...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCTTCCAGCTACCATCCTaGATTGGCCTAGGCCCCATA +
Preference number: 2 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFFQLPS*IGLGPI
Trigger: TATGGGGCCTAGGCCAATCCAGGATGGTAGCTGGAA...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTAAAACGGCAGAGCGCTaGTGTGGGACTAGGATGTTG +
Preference number: 2 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGKTAER*CGTRML
Trigger: CAACATCCTAGTCCCACACCAGCGCTCTGCCGTTTT...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTACTTTCTTCTATCCAGTaGGGTAACAGCGTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVLSSIQ*GNSVLP
Trigger: AGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAG...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAACCCAACTAAGAGGATaGGGCTGGGGGTCCCCCAAG +
Preference number: 2 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKTQLRG*GWGSPK
Trigger: CTTGGGGGACCCCCAGCCTCATCCTCTTAGTTGGGT...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp TGCCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGGAATAAATGTAACAAATACCCAGCCTaGCTACCCCAAGGCAACTGC +
Preference number: 2 (lower is better)
Translates to: CLLSRPRHFSAYHQRNKCNKYPA*LPQGNC
Trigger: GCAGTTGCCTTGGGGTAGTCAGGCTGGGTATTTGTT...ACATTTATTCCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGTGGGGATACTTGAGCTaGAGGTTATATTTCTGCTTG +
Preference number: 2 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWWGYLS*RLYFCL
Trigger: CAAGCAGAAATATAACCTTCAGCTCAAGTATCCCCA...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCACACTTCAAAGCTAAGTaGCATAGTGCCTTAAGTATT +
Preference number: 2 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAHFKAK*HSALSI
Trigger: AATACTTAAGGCACTATGGCACTTAGCTTTGAAGTG...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATAGCCTTCTTACCCCCATaGATAGAAATAACAATGCTC +
Preference number: 2 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMIAFLPP*IEITML
Trigger: GAGCATTGTTATTTCTATGCATGGGGGTAAGAAGGC...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATTCACACTTCCCTCCCTaGTGCCGCTATTATTCTACT +
Preference number: 2 (lower is better)
Translates to: ILSACRKDRVASCRFKCHSHFPP*CRYYST
Trigger: AGTAGAATAATAGCGGCAGCAGGGAGGGAAGTGTGA...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACAGCTCCTGGGGCTTaGAAAGCTTTCTTCTATCCA +
Preference number: 2 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPTAPGA*KAFFYP
Trigger: TGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGT...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR CCA 90 bp GTTTGTGCTACGTTTTGTGAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCCCTCCTTGCTTCCTCTaGATTTGGGTGGCACAGCTC +
Preference number: 2 (lower is better)
Translates to: VCATFCELLNNVANQNRTPPCFL*IWVAQL
Trigger: GAGCTGTGCCACCCAAATCCAGAGGAAGCAAGGAGG...GGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGTAGCACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
3UTR-3UTR CCA 90 bp CAACACCACTTCTCCATCTGCATGCACCACCTTTCAAACAGGAATAATCTCAAGGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 2 (lower is better)
Translates to: QHHFSICMHHLSNRNNLKGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...CTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GTTTGTGCTACGTTTTGTGAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCGAGATTTCTGGCTGGTaGTCTGTCTTGCTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: VCATFCELLNNVANQNRTEISGW*SVLLAL
Trigger: CAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTC...GGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGTAGCACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGATATCAGAGATTTCTaGCTGGTGGTCTGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKDIRDF*LVVCLA
Trigger: AGCAAGACAGACCACCAGCCAGAAATCTCTGATATC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTCACCTGTGTGTATGGTaGGCACCAGTGCTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIAHLCVW*APVLPL
Trigger: AAGGGGCAGCACTGGTGCCCACCATACACACAGGTG...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGAGTATTACTAGGGGCTaGATGTCTGTCAGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWSITRG*MSVREE
Trigger: CTCCTCCCTGACAGACATCCAGCCCCTAGTAATACT...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp TCAACTGGTCAAAATCTGCTCCATGTCCAATCTGCTCTTCAAGTTCAACCAACCAGCTGGCTTTCTGGCTaGAGGTTTGTTGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: STGQNLLHVQSALQVQPTSWLSG*RFVGSG
Trigger: CCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT...GGTTGGTTGAACTTGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTAGCTGGCTTTCTGGCTaGAGGTTTGTTGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRISWLSG*RFVGSG
Trigger: CCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCAAGGAAGGATGGAGCCTaGACCCCATCTTGGGGCGAT +
Preference number: 2 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPRKDGA*TPSWGD
Trigger: ATCGCCCCAAGATGGGGTCCAGGCTCCATCCTTCCT...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACATTCTGTTCTTCAGCTaGGCTTGTGCCTATAGGGCA +
Preference number: 2 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHILFFS*ACAYRA
Trigger: TGCCCTATAGGCACAAGCCCAGCTGAAGAACAGAAT...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGCACCGGCGTCTTCCCTaGCAGGATGACAATAATGAG +
Preference number: 2 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKHRRLP*QDDNNE
Trigger: CTCATTATTGTCATCCTGCCAGGGAAGACGCCGGTG...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCATCAAACTCAAATGGGTaGGTGATGTTGGTGTCCACT +
Preference number: 2 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKASNSNG*VMLVST
Trigger: AGTGGACACCAACATCACCCACCCATTTGAGTTTGA...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CAA 90 bp GAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCTGGGATAGATaGTTTTGCATAGCAAATCCGGGTCATACAAGGGCAGCTAAGGGG +
Preference number: 2 (lower is better)
Translates to: ELLNNVANQNRTWDR*FCIANPGHTRAAKG
Trigger: CCCCTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCTATCCCAGGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CAA 90 bp CAGCCTTACAGATATCCTATGGGCCAGCTAATAGTCAGTGCACCCTaGGCTGCCCATCTTGAGTGCTGGCCTTATTCACAAACAGAAAAA +
Preference number: 2 (lower is better)
Translates to: QPYRYPMGQLIVSAP*AAHLECWPYSQTEK
Trigger: TTTTTCTGTTTGTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGGCCCATAGGATATCTGTAAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTCTTTCTTCTATCCAGTaGGGTAACAGCGTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSLSSIQ*GNSVLP
Trigger: AGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAG...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR TCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTCCAAGCTGTCAAGCATaGGTCTTTAGCACTGTGAGT +
Preference number: 2 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSPSCQA*VFSTVS
Trigger: ACTCACAGTGCTAAAGACTCATGCTTGACAGCTTGG...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp GCTTTAGAAGGACACAGAAAAATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCGCAGGGCTACAGAGTTaGCCTTACCAAGCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: ALEGHRKICLSFARHGSVAGLQS*PYQAVK
Trigger: CTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGC...GACAGAACCGTGTCTGGCAAAAGAGAGACAGATTTTTCTGTGTCCTTCTAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATGAGGAAATTCCACACTaGAGTTGCAACTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: TILSHGPRLESTGHLSSNEEIPH*SCNSPS
Trigger: GGATGGGGAGTTGCAACTTCAGTGTGGAATTTCCTC...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp GTCTACTACAGTATTGCCTTGGTAGCCCTTTGCCCAGTCTGTTATTTATTTACTTGCCACCCACCCACATaGCCTAGTGGGAAACCAGGA +
Preference number: 2 (lower is better)
Translates to: VYYSIALVALCPVCYLFTCHPPT*PSGKPG
Trigger: TCCTGGTTTCCCACTAGGGCATGTGGGTGGGTGGCA...AGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTCCCTCCCCACAATACTaGTGGCACAGTGCTTTGCAT +
Preference number: 2 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRIPSPQY*WHSALH
Trigger: ATGCAAAGCACTGTGCCAGCAGTATTGTGGGGAGGG...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGGGGTGTGTAACATCTaGTCCCAGGAATATCACTGG +
Preference number: 2 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKGVCNI*SQEYHW
Trigger: CCAGTGATATTCCTGGGAGCAGATGTTACACACCCC...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATGCTTCCTCTGGATTTaGGTGGCACAGCTCCTGGGG +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQCFLWI*VAQLLG
Trigger: CCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGCA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
3UTR-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 2 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTAGATATCAGAGATTTCTaGCTGGTGGTCTGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVDIRDF*LVVCLA
Trigger: AGCAAGACAGACCACCAGCCAGAAATCTCTGATATC...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQRHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCACCAGGTGGACATCTCTaGGCTTGGGGAACAGGTTCT +
Preference number: 2 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPPGGHL*AWGTGS
Trigger: AGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGG...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAATTCCCCTCCCTTTCTTaGATGCCCAAACAGCAGCCA +
Preference number: 2 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKFPSLS*MPKQQP
Trigger: TGGCTGCTGTTTGGGCATCCAAGAAAGGGAGGGGAA...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACACATACCAATTAGGCTaGACTGTGTGCACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHTYQLG*TVCTGK
Trigger: CTTTCCTGTGCACACAGTCCAGCCTAATTGGTATGT...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCAATTGCCATGAGATTCTaGGGTCTGCTACACCAAGAG +
Preference number: 2 (lower is better)
Translates to: NSASSHLKTQTPFQGENAIAMRF*GLLHQE
Trigger: CTCTTGGTGTAGCAGACCCCAGAATCTCATGGCAAT...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp TCAGCTTCTTCCAGAATAGACATTAGACATGGTGACAGTGATAAACCTTTGGGGACAGGTAAAAGAGGCTaGGCCCAGTGGCTTGTGGCT +
Preference number: 2 (lower is better)
Translates to: SASSRIDIRHGDSDKPLGTGKRG*AQWLVA
Trigger: AGCCACAAGCCACTGGGCCCAGCCTCTTTTACCTGT...CCCCAAAGGTTTATCACTGTCACCATGTCTAATGTCTATTCTGGAAGAAGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTAATCATGGTCGAGGTCTaGTTGTCGGTCAGCTTTTTA +
Preference number: 2 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVIMVEV*LSVSFL
Trigger: TAAAAAGCTGACCGACAACCAGACCTCGACCATGAT...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATGCAGGGCTACAGAGTTaGCCTTACCAAGCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDAGLQS*PYQAVK
Trigger: CTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGC...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTTGTGCTACGTTTTGTaGGTTGCTGAACAATGTAGC +
Preference number: 2 (lower is better)
Translates to: YQILSACRKDRVASCRFKLCYVL*VAEQCS
Trigger: GCTACATTGTTCAGCAACTCACAAAACGTAGCACAA...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp TGCCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGGAATAAATGTATTTCAAGCCCCAGCTaGAAACCAACTGGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: CLLSRPRHFSAYHQRNKCISSPS*KPTGES
Trigger: ACTCTCTCCAGTTGGTTTTCAGCTGGGGCTTGAAAT...ACATTTATTCCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp TCAGCTTCTTCCAGAATAGACATTAGACATGGTGACAGTGATAAACCTTTGGGGTGCTGCTGCTGCTGCTaGTGTTGCTTGCTTCAGAAG +
Preference number: 2 (lower is better)
Translates to: SASSRIDIRHGDSDKPLGCCCCC*CCLLQK
Trigger: CTTCTGAAGCAAGCAACATCAGCAGCAGCAGCAGCA...CCCCAAAGGTTTATCACTGTCACCATGTCTAATGTCTATTCTGGAAGAAGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCTATGGGGATAGTAAGTaGGCACATGAAAAGATGATC +
Preference number: 2 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSYGDSK*AHEKMI
Trigger: GATCATCTTTTCATGTGCTCACTTACTATCCCCATA...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTGGTTATATTTCTGCTTaGAATACTGTGCCACTGTGC +
Preference number: 2 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFGYISA*NTVPLC
Trigger: GCACAGTGGCACAGTATTTCAAGCAGAAATATAACC...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTGCAGATGGGGATACTTaGGCTGAAGGTTATATTTCT +
Preference number: 2 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFADGDT*AEGYIS
Trigger: AGAAATATAACCTTCAGCTCAAGTATCCCCATCTGC...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR TCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGCGATGGCCCAGACTTTaGTCTCAATCCCATTGTAGA +
Preference number: 2 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKRWPRL*SQSHCR
Trigger: TCTACAATGGGATTGAGATCAAAGTCTGGGCCATCG...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATTGCCCTGCATATCCCTaGCATGATCAGATTTTAAGA +
Preference number: 2 (lower is better)
Translates to: ILSACRKDRVASCRFKCHCPAYP*HDQILR
Trigger: TCTTAAAATCTGATCATGGCAGGGATATGCAGGGCA...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGACCTCCTTCCCAATCTaGTTAGAAGGCCAAATAGTA +
Preference number: 2 (lower is better)
Translates to: YQILSACRKDRVASCRFKTSFPI*LEGQIV
Trigger: TACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGT...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATATTATCTTCCTCCTATaGCAGGGGACTATTTGGCTA +
Preference number: 2 (lower is better)
Translates to: ILSACRKDRVASCRFKCHIIFLL*QGTIWL
Trigger: TAGCCAAATAGTCCCCTGGCATAGGAGGAAGATAAT...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp TGGGATATAAACTCATCAGGCATGGGAAGGATTTCCAAATTTTGGCAATACACTAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 2 (lower is better)
Translates to: WDINSSGMGRISKFWQYTRHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...AGTGTATTGCCAAAATTTGGAAATCCTTCCCATGCCTGATGAGTTTATATCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CAACACCACTTCTCCATCTGCATGCACCACCTTTCAAACAGGAATAATCTCAAGGGAGGAGAAGTAAGGTaGGGCAGAAAATGTGGACAG +
Preference number: 2 (lower is better)
Translates to: QHHFSICMHHLSNRNNLKGGEVR*GRKCGQ
Trigger: CTGTCCACATTTTCTGCCCCACCTTACTTCTCCTCC...CTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GCTTTAGAAGGACACAGAAAAATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCTGGCTGGAGGTTTGTTaGGTCTGGGGTATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: ALEGHRKICLSFARHGSVWLEVC*VWGISS
Trigger: GGAAGAAATACCCCAGACCCAACAAACCTCCAGCCA...GACAGAACCGTGTCTGGCAAAAGAGAGACAGATTTTTCTGTGTCCTTCTAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATGCACAGAGGAAGGATaGAGCCTGGACCCCATCTTG +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQCTEEG*SLDPIL
Trigger: CAAGATGGGGTCCAGGCTCCATCCTTCCTCTGTGCA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp TCAGCTTCTTCCAGAATAGACATTAGACATGGTGACAGTGATAAACCTTTGGGGGCTGGCCTCCAAGCCTaGGCTAGGTCTAAAGTAATC +
Preference number: 2 (lower is better)
Translates to: SASSRIDIRHGDSDKPLGAGLQA*ARSKVI
Trigger: GATTACTTTAGACCTAGCCCAGGCTTGGAGGCCAGC...CCCCAAAGGTTTATCACTGTCACCATGTCTAATGTCTATTCTGGAAGAAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp GTCTACTACAGTATTGCCTTGGTAGCCCTTTGCCCAGTCTGTTATTTATTTACTCCAGGTGGACATCTCTaGGCTTGGGGAACAGGTTCT +
Preference number: 2 (lower is better)
Translates to: VYYSIALVALCPVCYLFTPGGHL*AWGTGS
Trigger: AGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGG...AGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTCATGAACTCAATCACTaGCTGTGCCTTATAAAAGGC +
Preference number: 2 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFHELNH*LCLIKG
Trigger: GCCTTTTATAAGGCACAGCCAGTGATTGAGTTCATG...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CAA 90 bp CACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTaGGTAGCCCTTTGCCCAGTCTGTTATTTATTTACTACTTGTGTG +
Preference number: 2 (lower is better)
Translates to: HPSMVGHLLVYYSIA*VALCPVCYLFTTCV
Trigger: CACACAAGTAGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp GTTTGTGCTACGTTTTGTGAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCCTTTCTTCTATCCAGTaGGGTAACAGCGTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: VCATFCELLNNVANQNRTLSSIQ*GNSVLP
Trigger: AGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAG...GGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGTAGCACAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
3UTR-3UTR TCA 90 bp TCTCAGCAGCTCCGAGACTTGTCATGTTTGAAAGTGCAAATGTCAATGGATTTTGCAGGGCTACAGAGTTaGCCTTACCAAGCTGTCAAG +
Preference number: 2 (lower is better)
Translates to: SQQLRDLSCLKVQMSMDFAGLQS*PYQAVK
Trigger: CTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGC...AAAATCCATTGACATTTGCACTTTCAAACATGACAAGTCTCGGAGCTGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATGAGACTTGTCATGTTTaGAAGTGCAAATGTCAATGG +
Preference number: 2 (lower is better)
Translates to: ILSACRKDRVASCRFKCHETCHV*KCKCQW
Trigger: CCATTGACATTTGCACTTTCAAACATGACAAGTCTC...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp TCAACTGGTCAAAATCTGCTCCATGTCCAATCTGCTCTTCAAGTTCAACCAACCGAAGTAGACTGTATATaGAGGCAATGGACAGGGCAG +
Preference number: 2 (lower is better)
Translates to: STGQNLLHVQSALQVQPTEVDCI*RQWTGQ
Trigger: CTGCCCTGTCCATTGCCTTCATATACAGTCTACTTC...GGTTGGTTGAACTTGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGGAAGTAGACTGTATATaGAGGCAATGGACAGGGCAG +
Preference number: 2 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLEVDCI*RQWTGQ
Trigger: CTGCCCTGTCCATTGCCTTCATATACAGTCTACTTC...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp TTAGACATGGTGACAGTGATAAACCTTTGGGGTGGGCTAGTCTTTTTCAACATTTGCCAGAAACCCTCCTaGCTTCACACAAGTTGGGCA +
Preference number: 2 (lower is better)
Translates to: LDMVTVINLWGGLVFFNICQKPS*LHTSWA
Trigger: TGCCCAACTTGTGTGAAGTCAGGAGGGTTTCTGGCA...AATGTTGAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGTCACCATGTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp TTCCTTGCACTAACTCTTTCGTTTAGCCACCAAATCCTAATTGCCATGAGATTCCTTGGCTGCCCATCTTaGGTGCTGGCCTTATTCACA +
Preference number: 2 (lower is better)
Translates to: FLALTLSFSHQILIAMRFLGCPS*VLALFT
Trigger: TGTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAG...GAATCTCATGGCAATTAGGATTTGGTGGCTAAACGAAAGAGTTAGTGCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGCTTGTTAGTTACACATaGTTCCAGGTCCAAAACTGT +
Preference number: 2 (lower is better)
Translates to: YQILSACRKDRVASCRFKLVSYT*FQVQNC
Trigger: ACAGTTTTGGACCTGGAATCATGTGTAACTAACAAG...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp GCTTTAGAAGGACACAGAAAAATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCACCTCCAACTTGGGGTaGGTGGGAAAAGACAATGAT +
Preference number: 2 (lower is better)
Translates to: ALEGHRKICLSFARHGSVTSNLG*VGKDND
Trigger: ATCATTGTCTTTTCCCACTCACCCCAAGTTGGAGGT...GACAGAACCGTGTCTGGCAAAAGAGAGACAGATTTTTCTGTGTCCTTCTAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTGTCATCCTTCACTTTaGTCCCAAATTCCTGGATGT +
Preference number: 2 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGCHPSL*SQIPGC
Trigger: ACATCCAGGAATTTGGGATCAAAGTGAAGGATGACA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR GCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATAAAAGGTTGCAGTTCTaGAGCATTACCGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: TILSHGPRLESTGHLSSNKRLQF*SITVTG
Trigger: CCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTT...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGCTCATTTCTTGTCATTaGCCAAAGCTGATTCTCTTG +
Preference number: 2 (lower is better)
Translates to: YQILSACRKDRVASCRFKLISCH*PKLILL
Trigger: CAAGAGAATCAGCTTTGGGCAATGACAAGAAATGAG...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGGCTGCCCATCTTGAGTaGTGGCCTTATTCACAAACA +
Preference number: 2 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLAAHLE*WPYSQT
Trigger: TGTTTGTGAATAAGGCCAGCACTCAAGATGGGCAGC...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GTCTACTACAGTATTGCCTTGGTAGCCCTTTGCCCAGTCTGTTATTTATTTACTCCAGCTAATAGTCAGTaGACCCTTGGCTGCCCATCT +
Preference number: 2 (lower is better)
Translates to: VYYSIALVALCPVCYLFTPANSQ*TLGCPS
Trigger: AGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGG...AGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CAACACCACTTCTCCATCTGCATGCACCACCTTTCAAACAGGAATAATCTCAAGACAGCTCCTGGGGCTTaGAAAGCTTTCTTCTATCCA +
Preference number: 2 (lower is better)
Translates to: QHHFSICMHHLSNRNNLKTAPGA*KAFFYP
Trigger: TGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGT...CTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
3UTR-3UTR CCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATCAGAGATTTCTGGCTaGTGGTCTGTCTTGCTGGCC +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQSEISG*WSVLLA
Trigger: GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATGATATCAGAGATTTCTaGCTGGTGGTCTGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: TILSHGPRLESTGHLSSNDIRDF*LVVCLA
Trigger: AGCAAGACAGACCACCAGCCAGAAATCTCTGATATC...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCGGAGGAGAAGTAAGGTaGGGCAGAAAATGTGGACAG +
Preference number: 2 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFGGEVR*GRKCGQ
Trigger: CTGTCCACATTTTCTGCCCCACCTTACTTCTCCTCC...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTTGGCTGGAGGTTTGTTaGGTCTGGGGTATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIAWLEVC*VWGISS
Trigger: GGAAGAAATACCCCAGACCCAACAAACCTCCAGCCA...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCTGGCTGGAGGTTTGTTaGGTCTGGGGTATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFWLEVC*VWGISS
Trigger: GGAAGAAATACCCCAGACCCAACAAACCTCCAGCCA...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCATGGCTGGAGGTTTGTTaGGTCTGGGGTATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPWLEVC*VWGISS
Trigger: GGAAGAAATACCCCAGACCCAACAAACCTCCAGCCA...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAAAGCTGGCTTTCTGGCTaGAGGTTTGTTGGGTCTGGG +
Preference number: 2 (lower is better)
Translates to: RKPENTSFPICLEGQIVKSWLSG*RFVGSG
Trigger: CCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT...TTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAACCAGCTCCAAGGAGTaGACAGGTGTGGAAAATGCC +
Preference number: 2 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKTSSKE*TGVENA
Trigger: GGCATTTTCCACACCTGTCCACTCCTTGGAGCTGGT...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATACATACCAATTAGGCTaGACTGTGTGCACAGGAAAG +
Preference number: 2 (lower is better)
Translates to: TILSHGPRLESTGHLSSNTYQLG*TVCTGK
Trigger: CTTTCCTGTGCACACAGTCCAGCCTAATTGGTATGT...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCAAATGAGCTTCAAGAATaGGGCTCAGCAAACAAGCTA +
Preference number: 2 (lower is better)
Translates to: NSASSHLKTQTPFQGENANELQE*GSANKL
Trigger: TAGCTTGTTTGCTGAGCCCCATTCTTGAAGCTCATT...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CAA 90 bp CAAAGCTGTATGAGGCTCTCTCCTGACTACATGTACACCCTATATTaGGATAACTCATTCCCAACTGAGTCTGCTCTTAAGGGTACAGAG +
Preference number: 2 (lower is better)
Translates to: QSCMRLSPDYMYTLY*DNSFPTESALKGTE
Trigger: CTCTGTACCCTTAAGAGCAGACTCAGTTGGGAATGAGTTATCCAAATATAGGGTGTACATGTAGTCAGGAGAGAGCCTCATACAGCTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCAATTTCAAGCCCCAGCTaGAAACCAACTGGAGAGAGT +
Preference number: 2 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPISSPS*KPTGES
Trigger: ACTCTCTCCAGTTGGTTTTCAGCTGGGGCTTGAAAT...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp CGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAACTTGGCTGCCCATCTTaGGTGCTGGCCTTATTCACA +
Preference number: 2 (lower is better)
Translates to: RKPENTSFPICLEGQIVKLGCPS*VLALFT
Trigger: TGTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAG...TTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATCAGAATTTACATGCTTaGCAATTATACCACCAGCTT +
Preference number: 2 (lower is better)
Translates to: ILSACRKDRVASCRFKCHQNLHA*QLYHQL
Trigger: AAGCTGGTGGTATAATTGTCAAGCATGTAAATTCTG...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACGTCAATTCCTTCAAATaGAAAATAGCTGGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHVNSFK*KIAGFL
Trigger: CAGAAAGCCAGCTATTTTGCATTTGAAGGAATTGAC...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp TATAAGACTCCTGTATCTATAAATGCAGTTTTACAGTCTTACCTGAGCACCAACTCCAAGTGGAGAACATaGAGAGCCCACTGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: YKTPVSINAVLQSYLSTNSKWRT*RAHCPR
Trigger: CCTGGGACAGTGGGCTCTGCATGTTCTCCACTTGGA...GTTGGTGCTCAGGTAAGACTGTAAAACTGCATTTATAGATACAGGAGTCTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp CGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAAGTAGAGGCTGCCACCTaGTCCCTATGGACATTTGCA +
Preference number: 2 (lower is better)
Translates to: RKPENTSFPICLEGQIVKVEAAT*SLWTFA
Trigger: TGCAAATGTCCATAGGGAGCAGGTGGCAGCCTCTAC...TTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp CGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAACCAGCTAATAGTCAGTaGACCCTTGGCTGCCCATCT +
Preference number: 2 (lower is better)
Translates to: RKPENTSFPICLEGQIVKPANSQ*TLGCPS
Trigger: AGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGG...TTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATACCTCCTTCCCAATCTaGTTAGAAGGCCAAATAGTA +
Preference number: 2 (lower is better)
Translates to: TILSHGPRLESTGHLSSNTSFPI*LEGQIV
Trigger: TACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGT...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCACAGCTCCTGGGGCTTaGAAAGCTTTCTTCTATCCA +
Preference number: 2 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFTAPGA*KAFFYP
Trigger: TGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGT...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR CCA 90 bp AACAAAAATGGTGAGCTAATTTTCCAATTCGACATTACTTCCCATTCAGGCAGTGAGATTTCTGGCTGGTaGTCTGTCTTGCTGGCCCTG +
Preference number: 2 (lower is better)
Translates to: NKNGELIFQFDITSHSGSEISGW*SVLLAL
Trigger: CAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTC...ACTGCCTGAATGGGAAGTAATGTCGAATTGGAAAATTAGCTCACCATTTTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTGAGGTTTGTTGGGTCTaGGGTATTTCTTCCCCATCT +
Preference number: 2 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIAEVCWV*GISSPS
Trigger: AGATGGGGAAGAAATACCCCAGACCCAACAAACCTC...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGGCCCATCTTGAGTGCTaGCCTTATTCACAAACAGAA +
Preference number: 2 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLAHLEC*PYSQTE
Trigger: TTCTGTTTGTGAATAAGGCCAGCACTCAAGATGGGC...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp TCAGCTTCTTCCAGAATAGACATTAGACATGGTGACAGTGATAAACCTTTGGGGACAAGTACACAGCTGTaGGGATCCAGAGACATTTCC +
Preference number: 2 (lower is better)
Translates to: SASSRIDIRHGDSDKPLGTSTQL*GSRDIS
Trigger: GGAAATGTCTCTGGATCCCCACAGCTGTGTACTTGT...CCCCAAAGGTTTATCACTGTCACCATGTCTAATGTCTATTCTGGAAGAAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp GCTTTAGAAGGACACAGAAAAATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCATAGAACCTCCAACTTaGGGTGAGTGGGAAAAGACA +
Preference number: 2 (lower is better)
Translates to: ALEGHRKICLSFARHGSVIEPPT*GEWEKT
Trigger: TGTCTTTTCCCACTCACCCCAAGTTGGAGGTTCTAT...GACAGAACCGTGTCTGGCAAAAGAGAGACAGATTTTTCTGTGTCCTTCTAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CAA 90 bp TTTATAAAACACAGAATTGTGCTGCTGCTGCTGCTGCTGCTGATGTaGCTTGCTTCAGAAGGAACTGTACATTACAGCTGCTGGGATAAT +
Preference number: 2 (lower is better)
Translates to: FIKHRIVLLLLLLLM*LASEGTVHYSCWDN
Trigger: ATTATCCCAGCAGCTGTAATGTACAGTTCCTTCTGAAGCAAGCAACATCAGCAGCAGCAGCAGCAGCAGCACAATTCTGTGTTTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp CCCACAAACACCTCAAAACTCAGTCTATACAACATTCTGTTTCTTCAAAAACTCCACTGCAATCTAGGATaGGCCAAAGGGTCAGAGGAC +
Preference number: 2 (lower is better)
Translates to: PTNTSKLSLYNILFLQKLHCNLG*AKGSED
Trigger: GTCCTCTGACCCTTTGGCTCATCCTAGATTGCAGTG...GAGTTTTTGAAGAAACAGAATGTTGTATAGACTGAGTTTTGAGGTGTTTGTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCAACTCAAAACCACATCTaGCTCCAATTCTTACTTTCT +
Preference number: 2 (lower is better)
Translates to: NSASSHLKTQTPFQGENATQNHI*LQFLLS
Trigger: AGAAAGTAAGAATTGGAGTCAGATGTGGTTTTGAGT...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp CAACACCACTTCTCCATCTGCATGCACCACCTTTCAAACAGGAATAATCTCAAGAAAGGTACAAAAGGTTaGAGTTCTGCAGCATTACCG +
Preference number: 2 (lower is better)
Translates to: QHHFSICMHHLSNRNNLKKGTKG*SSAALP
Trigger: CGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT...CTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGCCAAATAGTAAAAAGTaGCCTGCATATCCCTGCCAT +
Preference number: 2 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLPNSKK*PAYPCH
Trigger: ATGGCAGGGATATGCAGGGCACTTTTTACTATTTGG...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp TCAGCTTCTTCCAGAATAGACATTAGACATGGTGACAGTGATAAACCTTTGGGGAGTAATGAAAAGGAATaGCCAGAGGTGCCAGGACAA +
Preference number: 2 (lower is better)
Translates to: SASSRIDIRHGDSDKPLGSNEKE*PEVPGQ
Trigger: TTGTCCTGGCACCTCTGGGCATTCCTTTTCATTACT...CCCCAAAGGTTTATCACTGTCACCATGTCTAATGTCTATTCTGGAAGAAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTTGCTCCAGCATATTTTaGCAATTGACAGAGCAGAAG +
Preference number: 2 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRICSSIF*QLTEQK
Trigger: CTTCTGCTCTGTCAATTGGCAAAATATGCTGGAGCA...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATGATATCAGAGATTTCTaGCTGGTGGTCTGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDDIRDF*LVVCLA
Trigger: AGCAAGACAGACCACCAGCCAGAAATCTCTGATATC...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTGATATCAGAGATTTCTaGCTGGTGGTCTGTCTTGCT +
Preference number: 2 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIADIRDF*LVVCLA
Trigger: AGCAAGACAGACCACCAGCCAGAAATCTCTGATATC...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAGAGGTTTGTTGGGTCTaGGGTATTTCTTCCCCATCT +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQEVCWV*GISSPS
Trigger: AGATGGGGAAGAAATACCCCAGACCCAACAAACCTC...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp CGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAATGGGGAACAGGTTCTTaGTCTTCTGCAGTCAAGGAG +
Preference number: 2 (lower is better)
Translates to: RKPENTSFPICLEGQIVKWGTGS*SSAVKE
Trigger: CTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCA...TTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATAATTTCACAATGGACTaGACAAGGTACAGCTCAAAG +
Preference number: 2 (lower is better)
Translates to: TILSHGPRLESTGHLSSNNFTMD*TRYSSK
Trigger: CTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATT...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CAA 90 bp CCTGATGCTTTCTCCATAATGAATGTTTGTGCTACGTTTTGTGAGTaGCTGAACAATGTAGCCAACCAGAACAGAACCTGGGATAGATTG +
Preference number: 2 (lower is better)
Translates to: PDAFSIMNVCATFCE*LNNVANQNRTWDRL
Trigger: CAATCTATCCCAGGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGTAGCACAAACATTCATTATGGAGAAAGCATCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp AACAAAAATGGTGAGCTAATTTTCCAATTCGACATTACTTCCCATTCAGGCAGTGCAAATGCTGGTGAATaGCTGGACCCTCCAGGAATA +
Preference number: 2 (lower is better)
Translates to: NKNGELIFQFDITSHSGSANAGE*LDPPGI
Trigger: TATTCCTGGAGGGTCCAGTCATTCACCAGCATTTGC...ACTGCCTGAATGGGAAGTAATGTCGAATTGGAAAATTAGCTCACCATTTTTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp TTAGACATGGTGACAGTGATAAACCTTTGGGGTGGGCTAGTCTTTTTCAACATTTTGACACAGCTGCTTTaGAGGAGTACTTCTGTCATG +
Preference number: 2 (lower is better)
Translates to: LDMVTVINLWGGLVFFNILTQLL*RSTSVM
Trigger: CATGACAGAAGTACTCCTTCAAAGCAGCTGTGTCAA...AATGTTGAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGTCACCATGTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAAAAAGGTTGCAGTTCTaGAGCATTACCGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKKRLQF*SITVTG
Trigger: CCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTT...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
42% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAATGGGATAGATTGTTTTaGATAGCAAATCCGGGTCAT +
Preference number: 2 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKWDRLF*IANPGH
Trigger: ATGACCCGGATTTGCTATGCAAAACAATCTATCCCA...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTTGGGATAGATTGTTTTaGATAGCAAATCCGGGTCAT +
Preference number: 2 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRIWDRLF*IANPGH
Trigger: ATGACCCGGATTTGCTATGCAAAACAATCTATCCCA...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp TTAGACATGGTGACAGTGATAAACCTTTGGGGTGGGCTAGTCTTTTTCAACATTGCTCCATGTCCAATCTaGTCTTCAAGTTCAACCAAC +
Preference number: 2 (lower is better)
Translates to: LDMVTVINLWGGLVFFNIAPCPI*SSSSTN
Trigger: GTTGGTTGAACTTGAAGAGCAGATTGGACATGGAGC...AATGTTGAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGTCACCATGTCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CCCACAAACACCTCAAAACTCAGTCTATACAACATTCTGTTTCTTCAAAAACTCAGGAGTGGACAGGTGTaGAAAATGCCAGAAACCCTC +
Preference number: 2 (lower is better)
Translates to: PTNTSKLSLYNILFLQKLRSGQV*KMPETL
Trigger: GAGGGTTTCTGGCATTTTCCACACCTGTCCACTCCT...GAGTTTTTGAAGAAACAGAATGTTGTATAGACTGAGTTTTGAGGTGTTTGTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATTGGATCAGGTTGGACTaGATAAACAATCAAAGAACA +
Preference number: 2 (lower is better)
Translates to: TILSHGPRLESTGHLSSNWIRLD*INNQRT
Trigger: TGTTCTTTGATTGTTTATCCAGTCCAACCTGATCCA...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCAATGTCTTATTTCAACTaGTCAAAATCTGCTCCATGT +
Preference number: 2 (lower is better)
Translates to: NSASSHLKTQTPFQGENAMSYFN*SKSAPC
Trigger: ACATGGAGCAGATTTTGACCAGTTGAAATAAGACAT...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATGAGACTTGTCATGTTTaGAAGTGCAAATGTCAATGG +
Preference number: 2 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDETCHV*KCKCQW
Trigger: CCATTGACATTTGCACTTTCAAACATGACAAGTCTC...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp TTAGACATGGTGACAGTGATAAACCTTTGGGGTGGGCTAGTCTTTTTCAACATTCTTTGGTGTTATCACTaGGCCACTGAATTAACCAAC +
Preference number: 2 (lower is better)
Translates to: LDMVTVINLWGGLVFFNILWCYH*ATELTN
Trigger: GTTGGTTAATTCAGTGGCTCAGTGATAACACCAAAG...AATGTTGAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGTCACCATGTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp TCAACTGGTCAAAATCTGCTCCATGTCCAATCTGCTCTTCAAGTTCAACCAACCGTCAATTCCTTCAAATaGAAAATAGCTGGCTTTCTG +
Preference number: 2 (lower is better)
Translates to: STGQNLLHVQSALQVQPTVNSFK*KIAGFL
Trigger: CAGAAAGCCAGCTATTTTGCATTTGAAGGAATTGAC...GGTTGGTTGAACTTGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATGCCCTGCATATCCCTaGCATGATCAGATTTTAAGA +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQCPAYP*HDQILR
Trigger: TCTTAAAATCTGATCATGGCAGGGATATGCAGGGCA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp TCAGCTTCTTCCAGAATAGACATTAGACATGGTGACAGTGATAAACCTTTGGGGAACCCTTCCTCCTTTTaGAGCTCACTCTCATTAATA +
Preference number: 2 (lower is better)
Translates to: SASSRIDIRHGDSDKPLGNPSSF*SSLSLI
Trigger: TATTAATGAGAGTGAGCTGCAAAAGGAGGAAGGGTT...CCCCAAAGGTTTATCACTGTCACCATGTCTAATGTCTATTCTGGAAGAAGCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCAATGGCTCAATGTTTCTaGGATATAAACTCATCAGGC +
Preference number: 2 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPMAQCF*DINSSG
Trigger: GCCTGATGAGTTTATATCCCAGAAACATTGAGCCAT...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp TTAGACATGGTGACAGTGATAAACCTTTGGGGTGGGCTAGTCTTTTTCAACATTCCAACTTGGGGTGAGTaGGAAAAGACAATGATAATG +
Preference number: 2 (lower is better)
Translates to: LDMVTVINLWGGLVFFNIPTWGE*EKTMIM
Trigger: CATTATCATTGTCTTTTCCCACTCACCCCAAGTTGG...AATGTTGAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGTCACCATGTCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp GTCTACTACAGTATTGCCTTGGTAGCCCTTTGCCCAGTCTGTTATTTATTTACTACAGTGATAAACCTTTaGGGTGGGCTAGTCTTTTTC +
Preference number: 2 (lower is better)
Translates to: VYYSIALVALCPVCYLFTTVINL*GGLVFF
Trigger: GAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGT...AGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAGTTACTCAACAGTCCTaGTGCTTTCTCCATAATGAA +
Preference number: 2 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKVTQQS*CFLHNE
Trigger: TTCATTATGGAGAAAGCATCAGGACTGTTGAGTAAC...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp AACAAAAATGGTGAGCTAATTTTCCAATTCGACATTACTTCCCATTCAGGCAGTAAAAGGTTGCAGTTCTaGAGCATTACCGTTACAGGG +
Preference number: 2 (lower is better)
Translates to: NKNGELIFQFDITSHSGSKRLQF*SITVTG
Trigger: CCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTT...ACTGCCTGAATGGGAAGTAATGTCGAATTGGAAAATTAGCTCACCATTTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp AGCTCAATGAATGAGGAAGTCAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGAAAGGTACAAAAGGTTaGAGTTCTGCAGCATTACCG +
Preference number: 2 (lower is better)
Translates to: SSMNEEVNSFKCKIAGFLKGTKG*SSAALP
Trigger: CGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT...CAGAAAGCCAGCTATTTTGCATTTGAAGGAATTGACTTCCTCATTCATTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAACTCATTTCTTGTCATTaGCCAAAGCTGATTCTCTTG +
Preference number: 2 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKLISCH*PKLILL
Trigger: CAAGAGAATCAGCTTTGGGCAATGACAAGAAATGAG...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAACAATCAAAGAACAGTaGTCTCCTTTCCCACCTTTT +
Preference number: 2 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKTIKEQ*SPFPPF
Trigger: AAAAGGTGGGAAAGGAGAGCACTGTTCTTTGATTGT...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp AACAAAAATGGTGAGCTAATTTTCCAATTCGACATTACTTCCCATTCAGGCAGTTCCAGGACCAAACAATaGAGGCTCCCAGTCTTTTTA +
Preference number: 2 (lower is better)
Translates to: NKNGELIFQFDITSHSGSSRTKQ*RLPVFL
Trigger: TAAAAAGACTGGGAGCCTGCATTGTTTGGTCCTGGA...ACTGCCTGAATGGGAAGTAATGTCGAATTGGAAAATTAGCTCACCATTTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp AACAAAAATGGTGAGCTAATTTTCCAATTCGACATTACTTCCCATTCAGGCAGTAGTAATGAAAAGGAATaGCCAGAGGTGCCAGGACAA +
Preference number: 2 (lower is better)
Translates to: NKNGELIFQFDITSHSGSSNEKE*PEVPGQ
Trigger: TTGTCCTGGCACCTCTGGGCATTCCTTTTCATTACT...ACTGCCTGAATGGGAAGTAATGTCGAATTGGAAAATTAGCTCACCATTTTTGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp GTCTACTACAGTATTGCCTTGGTAGCCCTTTGCCCAGTCTGTTATTTATTTACTATGGATGATCTTACTTaGTTTGCCAATGACAGGAGT +
Preference number: 2 (lower is better)
Translates to: VYYSIALVALCPVCYLFTMDDLT*FANDRS
Trigger: ACTCCTGTCATTGGCAAAGCAAGTAAGATCATCCAT...AGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTAACCAGAACAGAACCTaGGATAGATTGTTTTGCATA +
Preference number: 2 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIANQNRT*DRLFCI
Trigger: TATGCAAAACAATCTATCCCAGGTTCTGTTCTGGTT...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CAA 90 bp CAAGGGACTCAGTGCATTCAACAAATGTCTTTACTTGCACAATTCTaGGAGGGTTTCCTATTTTCCTCTGTAAAGAAGAAAATCTCCCTT +
Preference number: 2 (lower is better)
Translates to: QGTQCIQQMSLLAQF*EGFLFSSVKKKISL
Trigger: AAGGGAGATTTTCTTCTTTACAGAGGAAAATAGGAAACCCTCCAAGAATTGTGCAAGTAAAGACATTTGTTGAATGCACTGAGTCCCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CAA 90 bp ATCTTAAAAGTCATTTTTAATCCTCGACTGTACACAATCCAAATCTaGGTAGCAGCATCTGACAGGGTAAATACCAACTCTTGTGCAAGG +
Preference number: 2 (lower is better)
Translates to: ILKVIFNPRLYTIQI*VAASDRVNTNSCAR
Trigger: CCTTGCACAAGAGTTGGTATTTACCCTGTCAGATGCTGCTACCAAGATTTGGATTGTGTACAGTCGAGGATTAAAAATGACTTTTAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR TCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAGTCATTGCCCAAAGCTaGTTCTCTTGCTTTTTATTT +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQVIAQS*FSCFLF
Trigger: AAATAAAAAGCAAGAGAATCAGCTTTGGGCAATGAC...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR TCA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAGTCATTGCCCAAAGCTaGTTCTCTTGCTTTTTATTT +
Preference number: 2 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKVIAQS*FSCFLF
Trigger: AAATAAAAAGCAAGAGAATCAGCTTTGGGCAATGAC...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp GTCTACTACAGTATTGCCTTGGTAGCCCTTTGCCCAGTCTGTTATTTATTTACTCACTTCAAAGCTAAGTaGCATAGTGCCTTAAGTATT +
Preference number: 2 (lower is better)
Translates to: VYYSIALVALCPVCYLFTHFKAK*HSALSI
Trigger: AATACTTAAGGCACTATGGCACTTAGCTTTGAAGTG...AGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp CCCACAAACACCTCAAAACTCAGTCTATACAACATTCTGTTTCTTCAAAAACTCAAAGGTACAAAAGGTTaGAGTTCTGCAGCATTACCG +
Preference number: 2 (lower is better)
Translates to: PTNTSKLSLYNILFLQKLKGTKG*SSAALP
Trigger: CGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT...GAGTTTTTGAAGAAACAGAATGTTGTATAGACTGAGTTTTGAGGTGTTTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp TATAAGACTCCTGTATCTATAAATGCAGTTTTACAGTCTTACCTGAGCACCAACGGATCATTGCAGCCATaGAGAGATTTCATCATCACA +
Preference number: 2 (lower is better)
Translates to: YKTPVSINAVLQSYLSTNGSLQP*RDFIIT
Trigger: TGTGATGATGAAATCTCTGCATGGCTGCAATGATCC...GTTGGTGCTCAGGTAAGACTGTAAAACTGCATTTATAGATACAGGAGTCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATTCATTTTTCCTTATTaGTACTACACCAAGGGACTC +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQFIFPY*YYTKGL
Trigger: GAGTCCCTTGGTGTAGTAGCAATAAGGAAAAATGAA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR GCA 90 bp TTCCTTGCACTAACTCTTTCGTTTAGCCACCAAATCCTAATTGCCATGAGATTCTTCATTTTTCCTTATTaGTACTACACCAAGGGACTC +
Preference number: 2 (lower is better)
Translates to: FLALTLSFSHQILIAMRFFIFPY*YYTKGL
Trigger: GAGTCCCTTGGTGTAGTAGCAATAAGGAAAAATGAA...GAATCTCATGGCAATTAGGATTTGGTGGCTAAACGAAAGAGTTAGTGCAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR GCA 90 bp TATAAGACTCCTGTATCTATAAATGCAGTTTTACAGTCTTACCTGAGCACCAACATTATCTTCCTCCTATaGCAGGGGACTATTTGGCTA +
Preference number: 2 (lower is better)
Translates to: YKTPVSINAVLQSYLSTNIIFLL*QGTIWL
Trigger: TAGCCAAATAGTCCCCTGGCATAGGAGGAAGATAAT...GTTGGTGCTCAGGTAAGACTGTAAAACTGCATTTATAGATACAGGAGTCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp TATAAGACTCCTGTATCTATAAATGCAGTTTTACAGTCTTACCTGAGCACCAACCAAATGCAAAATAGCTaGCTTTCTGGCTGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: YKTPVSINAVLQSYLSTNQMQNS*LSGWRF
Trigger: AAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTG...GTTGGTGCTCAGGTAAGACTGTAAAACTGCATTTATAGATACAGGAGTCTTATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp AACAAAAATGGTGAGCTAATTTTCCAATTCGACATTACTTCCCATTCAGGCAGTCAAATGCAAAATAGCTaGCTTTCTGGCTGGAGGTTT +
Preference number: 2 (lower is better)
Translates to: NKNGELIFQFDITSHSGSQMQNS*LSGWRF
Trigger: AAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTG...ACTGCCTGAATGGGAAGTAATGTCGAATTGGAAAATTAGCTCACCATTTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATGGATCAGGTTGGACTaGATAAACAATCAAAGAACA +
Preference number: 2 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQWIRLD*INNQRT
Trigger: TGTTCTTTGATTGTTTATCCAGTCCAACCTGATCCA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CCA 90 bp AACAAAAATGGTGAGCTAATTTTCCAATTCGACATTACTTCCCATTCAGGCAGTGGGATAATTTCACAATaGACTGGACAAGGTACAGCT +
Preference number: 2 (lower is better)
Translates to: NKNGELIFQFDITSHSGSGIISQ*TGQGTA
Trigger: AGCTGTACCTTGTCCAGTCCATTGTGAAATTATCCC...ACTGCCTGAATGGGAAGTAATGTCGAATTGGAAAATTAGCTCACCATTTTTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CCCACAAACACCTCAAAACTCAGTCTATACAACATTCTGTTTCTTCAAAAACTCGGGATAATTTCACAATaGACTGGACAAGGTACAGCT +
Preference number: 2 (lower is better)
Translates to: PTNTSKLSLYNILFLQKLGIISQ*TGQGTA
Trigger: AGCTGTACCTTGTCCAGTCCATTGTGAAATTATCCC...GAGTTTTTGAAGAAACAGAATGTTGTATAGACTGAGTTTTGAGGTGTTTGTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CCA 90 bp CCCACAAACACCTCAAAACTCAGTCTATACAACATTCTGTTTCTTCAAAAACTCTACTTGCACAATTCTTaGAGGGTTTCCTATTTTCCT +
Preference number: 2 (lower is better)
Translates to: PTNTSKLSLYNILFLQKLYLHNS*RVSYFP
Trigger: AGGAAAATAGGAAACCCTCCAAGAATTGTGCAAGTA...GAGTTTTTGAAGAAACAGAATGTTGTATAGACTGAGTTTTGAGGTGTTTGTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp CGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTaGTTGGCTTCCAATTCTCCCAACGGGCCAACCGCT +
Preference number: 3 (lower is better)
Translates to: RRKWAPPVLQLY*LASNSPNGPTA
Trigger: AGCGGTTGGCCCGTTGGGAGAATTGGAAGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGCCAGTGCTGCCCCTTTaGGTCCAGTGGGGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWPVLPL*VQWGQG
Trigger: GCCCTGACCCCACTGGACCAAAAGGGGCAGCACTGG...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGCACAGCTCCTGGGGCTaGGAAAGCTTTCTTCTATCC +
Preference number: 3 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRHSSWG*ESFLLS
Trigger: GGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTG...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR TCA 72 bp CCCCAGCCTGTCCACAGGACACACTGCAATCTAGGATaGGCCAAAGGGTCAGAGGACAGTCCAGGGGAAGGA +
Preference number: 3 (lower is better)
Translates to: PQPVHRTHCNLG*AKGSEDSPGEG
Trigger: TCCTTCCCCTGGACTGTCCTCTGACCCTTTGGCTCATCCTAGATTGCAGTGTGTCCTGTGGACAGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR TCA 72 bp TTCAGGCCCTTGATCTCCTTGGTGAAGCGAACGCGCTaGGAGTCCGTGAGGGGCTTGGGCTGCTCATCTATG +
Preference number: 3 (lower is better)
Translates to: FRPLISLVKRTR*ESVRGLGCSSM
Trigger: CATAGATGAGCAGCCCAAGCCCCTCACGGACTCTCAGCGCGTTCGCTTCACCAAGGAGATCAAGGGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CCA 72 bp TGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTaGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTC +
Preference number: 3 (lower is better)
Translates to: CSSAALPLQGRH*LPTSGRKEDRV
Trigger: GACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGGCTGGTGGTCTGTCTaGCTGGCCCTGTTCCCCACT +
Preference number: 3 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAGWWSV*LALFPT
Trigger: AGTGGGGAACAGGGCCAGCAAGACAGACCACCAGCC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGCCAGTGCTGCCCCTTTaGGTCCAGTGGGGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: YQILSACRKDRVASCRFKPVLPL*VQWGQG
Trigger: GCCCTGACCCCACTGGACCAAAAGGGGCAGCACTGG...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTACTGGCTGGAGGTTTGTaGGGTCTGGGGTATTTCTTC +
Preference number: 3 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLLAGGL*GLGYFF
Trigger: GAAGAAATACCCCAGACCCAACAAACCTCCAGCCAG...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTCCTTGGCTGCCCATCTaGAGTGCTGGCCTTATTCAC +
Preference number: 3 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAPWLPI*SAGLIH
Trigger: GTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAGG...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp CCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTaGTCTTCTGCAGTCAAGGAGCTAAGCCTGACCCTG +
Preference number: 3 (lower is better)
Translates to: PGGHLWAWGTGS*SSAVKELSLTL
Trigger: CAGGGTCAGGCTTAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 72 bp GTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTaGCTTCCAATTCTCCCAACGGGCCAACCGCTGCTT +
Preference number: 3 (lower is better)
Translates to: VNGPRLCYSYTG*LPILPTGQPLL
Trigger: AAGCAGCGGTTGGCCCGTTGGGAGAATTGGAAGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGAGAACACAAACTTGTaGCTGGGAGTAGAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAENTNL*LGVEAA
Trigger: GGCAGCCTCTACTCCCAGCAACAAGTTTGTGTTCTC...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGGCATCCCCGCATCCTaGGAAATCTTCCGCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAGIPAS*EIFRSW
Trigger: CCAGCTGCGGAAGATTTCCAAGGATGCGGGGATGCC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR TCA 72 bp TCCAAGCCCAGGCTCCTCAAAGAGGAAATTCCACACTaGAGTTGCAACTCCCCATCCCAAGCAGTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: SKPRLLKEEIPH*SCNSPSQAVGQ
Trigger: CTGCCCCACTGCTTGGGATGGGGAGTTGCAACTTCAGTGTGGAATTTCCTCTTTGAGGAGCCTGGGCTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 72 bp AGGGTGAAAACGCACGGCGTAAATGGGCCCCGCCTGTaGTACAGCTATACTGGTTGGCTTCCAATTCTCCCA +
Preference number: 3 (lower is better)
Translates to: RVKTHGVNGPRL*YSYTGWLPILP
Trigger: TGGGAGAATTGGAAGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp CAAACTCCTTTCCAGGGTGAAAACGCACGGCGTAAATaGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCT +
Preference number: 3 (lower is better)
Translates to: QTPFQGENARRK*APPVLQLYWLA
Trigger: AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTCACCCTGGAAAGGAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTGGGGGACATGAGGTaGATATCAGAGATTTCTGGC +
Preference number: 3 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAVGDMR*ISEISG
Trigger: GCCAGAAATCTCTGATATCAACCTCATGTCCCCCAC...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCATTTCTGGCTGGAGGTTaGTTGGGTCTGGGGTATTTC +
Preference number: 3 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAFLAGG*LGLGYF
Trigger: GAAATACCCCAGACCCAACAAACCTCCAGCCAGAAA...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGAGAACACAAACTTGTaGCTGGGAGTAGAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQENTNL*LGVEAA
Trigger: GGCAGCCTCTACTCCCAGCAACAAGTTTGTGTTCTC...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR TCA 72 bp CACCTTCCTTCTACAGTCTCCCCGTCACCCCCATCTTaGCTGGCAGAATGTCCCAACACACTCCTATGGTCA +
Preference number: 3 (lower is better)
Translates to: HLPSTVSPSPPS*LAECPNTLLWS
Trigger: TGACCATAGGAGTGTGTTGGGACATTCTGCCAGTCAAGATGGGGGTGACGGGGAGACTGTAGAAGGAAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp GTGGGGGACATGAGGTTGATATCAGAGATTTCTGGCTaGTGGTCTGTCTTGCTGGCCCTGTTCCCCACTCTT +
Preference number: 3 (lower is better)
Translates to: VGDMRLISEISG*WSVLLALFPTL
Trigger: AAGAGTGGGGAACAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGATATCAACCTCATGTCCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
3UTR CCA 72 bp GCTACCAAATACTCAGTGCATGCAGGAAAGACAGAGTaGCCAGCTGCCGCTTTAAGTGTCATGTCCCTGCCC +
Preference number: 3 (lower is better)
Translates to: ATKYSVHAGKTE*PAAALSVMSLP
Trigger: GGGCAGGGACATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCCACAGCTCCTGGGGCTaGGAAAGCTTTCTTCTATCC +
Preference number: 3 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPHSSWG*ESFLLS
Trigger: GGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTG...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAAAACCTAACCAGCTTTaGTCTGCAGGGCTACAGAGT +
Preference number: 3 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAKPNQL*SAGLQS
Trigger: ACTCTGTAGCCCTGCAGACAAAAGCTGGTTAGGTTT...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGTTCTCGACACTGTTTTaGGGGTGCGAAGCAGGCGAT +
Preference number: 3 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWFSTLF*GCEAGD
Trigger: ATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGAA...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAAATGGGTGGGTGATGTaGGTGTCCACTGTGGTCCCA +
Preference number: 3 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKANGWVM*VSTVVP
Trigger: TGGGACCACAGTGGACACCAACATCACCCACCCATT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR TCA 72 bp TGCCACCTGCTCCCTATGGACATTTGCAAATGCTGGTaGATGACTGGACCCTCCAGGAATAGTGCCCTGATC +
Preference number: 3 (lower is better)
Translates to: CHLLPMDICKCW*MTGPSRNSALI
Trigger: GATCAGGGCACTATTCCTGGAGGGTCCAGTCATTCACCAGCATTTGCAAATGTCCATAGGGAGCAGGTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR TCA 72 bp AATGCTAGGTCCACGTATGTACACACTGGCTGCCACTaGCGATTTCTCACTGGGGTATCCGCCAGGATCCTT +
Preference number: 3 (lower is better)
Translates to: NARSTYVHTGCH*RFLTGVSARIL
Trigger: AAGGATCCTGGCGGATACCCCAGTGAGAAATCGTCAGTGGCAGCCAGTGTGTACATACGTGGACCTAGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp GGGGACATGAGGTTGATATCAGAGATTTCTGGCTGGTaGTCTGTCTTGCTGGCCCTGTTCCCCACTCTTACA +
Preference number: 3 (lower is better)
Translates to: GDMRLISEISGW*SVLLALFPTLT
Trigger: TGTAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGATATCAACCTCATGTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
3UTR CCA 72 bp GTGAAGTTCTTGAGCACCTCTTCTCGACACTGTTTTTaGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATC +
Preference number: 3 (lower is better)
Translates to: VKFLSTSSRHCF*GAKQAMAQTLI
Trigger: GATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGAAGAGGTGCTCAAGAACTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CCA 72 bp CACCATGTAGGACAAGTCTTCAATGATCTCTTGCCGTaGTCGCTGTACCCGCACAGTAGCACAGTATCGGCT +
Preference number: 3 (lower is better)
Translates to: HHVGQVFNDLLP*SLYPHSSTVSA
Trigger: AGCCGATACTGTGCTACTGTGCGGGTACAGCGACCACGGCAAGAGATCATTGAAGACTTGTCCTACATGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTACACAGCTCCTGGGGCTaGGAAAGCTTTCTTCTATCC +
Preference number: 3 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALHSSWG*ESFLLS
Trigger: GGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTG...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
3UTR-3UTR CAA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCGTGGGGGACATGAGGTaGATATCAGAGATTTCTGGC +
Preference number: 3 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPVGDMR*ISEISG
Trigger: GCCAGAAATCTCTGATATCAACCTCATGTCCCCCAC...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTCCAGTGCTGCCCCTTTaGGTCCAGTGGGGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIAPVLPL*VQWGQG
Trigger: GCCCTGACCCCACTGGACCAAAAGGGGCAGCACTGG...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTAGGAAAAAGATGCACTaGCAAGAAAGAGTGCAGGAC +
Preference number: 3 (lower is better)
Translates to: ENARRKWAPPVLQLYWLARKKMH*QERVQD
Trigger: GTCCTGCACTCTTTCTTGCAAGTGCATCTTTTTCCT...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTATCCACCTTCAGGCCCTaGATCTCCTTGGTGAAGCGA +
Preference number: 3 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVSTFRP*ISLVKR
Trigger: TCGCTTCACCAAGGAGATCAAGGGCCTGAAGGTGGA...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATCACAGCTCCTGGGGCTaGGAAAGCTTTCTTCTATCC +
Preference number: 3 (lower is better)
Translates to: ILSACRKDRVASCRFKCHHSSWG*ESFLLS
Trigger: GGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTG...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373204.6
3UTR-3UTR CAA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGTGGGGGACATGAGGTaGATATCAGAGATTTCTGGC +
Preference number: 3 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKVGDMR*ISEISG
Trigger: GCCAGAAATCTCTGATATCAACCTCATGTCCCCCAC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAACCAGTGCTGCCCCTTTaGGTCCAGTGGGGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQPVLPL*VQWGQG
Trigger: GCCCTGACCCCACTGGACCAAAAGGGGCAGCACTGG...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTAAAACCTAACCAGCTTTaGTCTGCAGGGCTACAGAGT +
Preference number: 3 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELKPNQL*SAGLQS
Trigger: ACTCTGTAGCCCTGCAGACAAAAGCTGGTTAGGTTT...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTTCCCCTCCCTTTCTaGGATGCCCAAACAGCAGCC +
Preference number: 3 (lower is better)
Translates to: TILSHGPRLESTGHLSSNLPLPF*DAQTAA
Trigger: GGCTGCTGTTTGGGCATCCAAGAAAGGGAGGGGAAG...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp AGGAGAGAACACAAACTTGTTGCTGGGAGTAGAGGCTaGCACCTGCTCCCTATGGACATTTGCAAATGCTGG +
Preference number: 3 (lower is better)
Translates to: RREHKLVAGSRG*HLLPMDICKCW
Trigger: CCAGCATTTGCAAATGTCCATAGGGAGCAGGTGGCAGCCTCTACTCCCAGCAACAAGTTTGTGTTCTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 72 bp GTTCTTGAGCACCTCTTCTCGACACTGTTTTTGGGGTaGGAAGCAGGCGATGGCCCAGACTTTGATCTCAAT +
Preference number: 3 (lower is better)
Translates to: VLEHLFSTLFLG*EAGDGPDFDLN
Trigger: ATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGAAGAGGTGCTCAAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CCA 72 bp AATGTCCCAACACACTCCTATGGTCAAGGAGAAACCTaGGAGCTAACCTCTACTCCTGTCTTCTCCTCCCAC +
Preference number: 3 (lower is better)
Translates to: NVPTHSYGQGET*ELTSTPVFSSH
Trigger: GTGGGAGGAGAAGACAGGAGTAGAGGTTAGCTCCCAGGTTTCTCCTTGACCATAGGAGTGTGTTGGGACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp AGCTCAATGAATGAGGAAGTCAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGCCAGTGCTGCCCCTTTaGGTCCAGTGGGGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: SSMNEEVNSFKCKIAGFLPVLPL*VQWGQG
Trigger: GCCCTGACCCCACTGGACCAAAAGGGGCAGCACTGG...CAGAAAGCCAGCTATTTTGCATTTGAAGGAATTGACTTCCTCATTCATTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCACAGCAGCTCCGAGACTaGTCATGTTTGAAAGTGCAA +
Preference number: 3 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAQQLRD*SCLKVQ
Trigger: TTGCACTTTCAAACATGACAAGTCTCGGAGCTGCTG...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACCTGCTGCTGCTGATGTaGCTTGCTTCAGAAGGAACT +
Preference number: 3 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHLLLLM*LASEGT
Trigger: AGTTCCTTCTGAAGCAAGCAACATCAGCAGCAGCAG...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 72 bp CAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTaGGGTAACAGCGTTCTGCCTTCAAGCGAAGTACAT +
Preference number: 3 (lower is better)
Translates to: QLLGLGKLSSIQ*GNSVLPSSEVH
Trigger: ATGTACTTCGCTTGAAGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR GCA 72 bp GATGCTCAACCAGTAATGAAAAGGAATGCCCAGAGGTaGCAGGACAAGCCTTCACTGAAAACCTTGAGCTCC +
Preference number: 3 (lower is better)
Translates to: DAQPVMKRNAQR*QDKPSLKTLSS
Trigger: GGAGCTCAAGGTTTTCAGTGAAGGCTTGTCCTGGCACCTCTGGGCATTCCTTTTCATTACTGGTTGAGCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp ACAGCTGCTTTGAAGGAGTACTTCTGTCATGCTGTGTaGCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTAT +
Preference number: 3 (lower is better)
Translates to: TAALKEYFCHAV*LLSRPRHFSAY
Trigger: ATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCACACAGCATGACAGAAGTACTCCTTCAAAGCAGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp CACTGGTCACTAATGAGCTACCAAATACTCAGTGCATaGAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAG +
Preference number: 3 (lower is better)
Translates to: HWSLMSYQILSA*RKDRVASCRFK
Trigger: CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTAGCTCATTAGTGACCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp TGGATGAGGAGAGCAACTGAGTACAATCCTCTCACATaGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTC +
Preference number: 3 (lower is better)
Translates to: WMRRATEYNPLT*AKIRVNWAPEF
Trigger: GAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGTACTCAGTTGCTCTCCTCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTGTGGGGGACATGAGGTaGATATCAGAGATTTCTGGC +
Preference number: 3 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSVGDMR*ISEISG
Trigger: GCCAGAAATCTCTGATATCAACCTCATGTCCCCCAC...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTGCAGGGCTACAGAGTaGACCTTACCAAGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWCRATE*TLPSCQ
Trigger: TTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGCA...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTGCAGGGCTACAGAGTaGACCTTACCAAGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGCRATE*TLPSCQ
Trigger: TTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGCA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTAAACCTAACCAGCTTTaGTCTGCAGGGCTACAGAGT +
Preference number: 3 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFKPNQL*SAGLQS
Trigger: ACTCTGTAGCCCTGCAGACAAAAGCTGGTTAGGTTT...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp TGCCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGGAATAAATGTCTGGCTGGAGGTTTGTaGGGTCTGGGGTATTTCTTC +
Preference number: 3 (lower is better)
Translates to: CLLSRPRHFSAYHQRNKCLAGGL*GLGYFF
Trigger: GAAGAAATACCCCAGACCCAACAAACCTCCAGCCAG...ACATTTATTCCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCGGAGAGAACACAAACTaGTTGCTGGGAGTAGAGGCT +
Preference number: 3 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFGENTN*LLGVEA
Trigger: AGCCTCTACTCCCAGCAACAAGTTTGTGTTCTCTCC...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCCTGCAGCAGTTCATGTaGTTAATCACTCCCTTCATG +
Preference number: 3 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSLQQFM*LITPFM
Trigger: CATGAAGGGAGTGATTAACAACATGAACTGCTGCAG...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGGAAAGTTCCCTCCCTTaGGAAAATGGGGACAAAGGA +
Preference number: 3 (lower is better)
Translates to: YQILSACRKDRVASCRFKESSLP*ENGDKG
Trigger: TCCTTTGTCCCCATTTTCCAAAGGGAGGGAACTTTC...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 72 bp CGATTTCTCACTGGGGTATCCGCCAGGATCCTTCTCTaGGCCTTCTTACCCCCATGCATAGAAATAACAATG +
Preference number: 3 (lower is better)
Translates to: RFLTGVSARILL*AFLPPCIEITM
Trigger: CATTGTTATTTCTATGCATGGGGGTAAGAAGGCTCAGAGAAGGATCCTGGCGGATACCCCAGTGAGAAATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 72 bp ATCTCAGGTGCAGAGAAATCAGTGCGCTCTGAAAGTTaGACCTCCTCAGGAGCCATCAAATACCCAGTGCAA +
Preference number: 3 (lower is better)
Translates to: ISGAEKSVRSES*TSSGAIKYPVQ
Trigger: TTGCACTGGGTATTTGATGGCTCCTGAGGAGGTTCAACTTTCAGAGCGCACTGATTTCTCTGCACCTGAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTaGCATAGTGCCTTAAGTATTACTAGGGGCTGGATG +
Preference number: 3 (lower is better)
Translates to: GRKTGSCHFKAK*HSALSITRGWM
Trigger: CATCCAGCCCCTAGTAATACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR GCA 72 bp CCATTCCCCAAAGAAAGGTACAAAAGGTTGCAGTTCTaGAGCATTACCGTTACAGGGAAGGCACTGGTTACC +
Preference number: 3 (lower is better)
Translates to: PFPKERYKRLQF*SITVTGKALVT
Trigger: GGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGGGAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR GCA 72 bp GTAGCCTTATTCCACTCCCTCATTATCTTCCTCCTATaGCAGGGGACTATTTGGCTAATCATATCCCCCACC +
Preference number: 3 (lower is better)
Translates to: VALFHSLIIFLL*QGTIWLIISPT
Trigger: GGTGGGGGATATGATTAGCCAAATAGTCCCCTGGCATAGGAGGAAGATAATGAGGGAGTGGAATAAGGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTCACATGAGCCAAAGCTaGCTGCCAACACCACTTCTC +
Preference number: 3 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRIHMSQS*LPTPLL
Trigger: GAGAAGTGGTGTTGGCAGCAAGCTTTGGCTCATGTG...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACCCCAGTCTTTTTAACTaGAGTAGCAACCACAGGCAA +
Preference number: 3 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHPSLFN*SSNHRQ
Trigger: TTGCCTGTGGTTGCTACTCAAGTTAAAAAGACTGGG...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTGCTGAGACATCAATGTaGAGCATCATCTTCCACATG +
Preference number: 3 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFAETSM*SIIFHM
Trigger: CATGTGGAAGATGATGCTCAACATTGATGTCTCAGC...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGAGGTTATATTTCTGCTaGAAATACTGTGCCACTGTG +
Preference number: 3 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWRLYFC*KYCATV
Trigger: CACAGTGGCACAGTATTTCAAGCAGAAATATAACCT...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGTGGTCTGTGAAGTTCTaGAGCACCTCTTCTCGACAC +
Preference number: 3 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKWSVKF*STSSRH
Trigger: GTGTCGAGAAGAGGTGCTCAAGAACTTCACAGACCA...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR-3UTR CAA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCACTGGCTGGAGGTTTGTaGGGTCTGGGGTATTTCTTC +
Preference number: 3 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPLAGGL*GLGYFF
Trigger: GAAGAAATACCCCAGACCCAACAAACCTCCAGCCAG...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GCTTTAGAAGGACACAGAAAAATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCTTTCTGGCTGGAGGTTaGTTGGGTCTGGGGTATTTC +
Preference number: 3 (lower is better)
Translates to: ALEGHRKICLSFARHGSVFLAGG*LGLGYF
Trigger: GAAATACCCCAGACCCAACAAACCTCCAGCCAGAAA...GACAGAACCGTGTCTGGCAAAAGAGAGACAGATTTTTCTGTGTCCTTCTAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCAGCAGCTCCGAGACTaGTCATGTTTGAAAGTGCAA +
Preference number: 3 (lower is better)
Translates to: TILSHGPRLESTGHLSSNQQLRD*SCLKVQ
Trigger: TTGCACTTTCAAACATGACAAGTCTCGGAGCTGCTG...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCAGGAAAAAGATGCACTaGCAAGAAAGAGTGCAGGAC +
Preference number: 3 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFRKKMH*QERVQD
Trigger: GTCCTGCACTCTTTCTTGCAAGTGCATCTTTTTCCT...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCCCCGAACCTTTAAATaGAGTTTCTTAGGGGGCTGT +
Preference number: 3 (lower is better)
Translates to: TILSHGPRLESTGHLSSNPRTFK*SFLGGC
Trigger: ACAGCCCCCTAAGAAACTCAATTTAAAGGTTCGGGG...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCCTTGACACAGCTGCTTaGAAGGAGTACTTCTGTCAT +
Preference number: 3 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFLDTAA*KEYFCH
Trigger: ATGACAGAAGTACTCCTTCAAAGCAGCTGTGTCAAG...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 72 bp GATGGGGAAGAAACGTCCAACCTTGTTAGTTACACATaGTTCCAGGTCCAAAACTGTCCCACCAGCCTTACA +
Preference number: 3 (lower is better)
Translates to: DGEETSNLVSYT*FQVQNCPTSLT
Trigger: TGTAAGGCTGGTGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTTCCCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR TCA 72 bp GTACAAAATCTCAGGTGCAGAGAAATCAGTGCGCTCTaGAAGTTGAACCTCCTCAGGAGCCATCAAATACCC +
Preference number: 3 (lower is better)
Translates to: VQNLRCREISAL*KLNLLRSHQIP
Trigger: GGGTATTTGATGGCTCCTGAGGAGGTTCAACTTTCAGAGCGCACTGATTTCTCTGCACCTGAGATTTTGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 72 bp CTCTTGTGCAAGGGTCTTTTATATCCTCAACCCCTCTaGTTCTGGAACCGGTTCCCTAAACAAAGGCAGACT +
Preference number: 3 (lower is better)
Translates to: LLCKGLLYPQPL*FWNRFPKQRQT
Trigger: AGTCTGCCTTTGTTTAGGGAACCGGTTCCAGAATCAGAGGGGTTGAGGATATAAAAGACCCTTGCACAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp GTAGCCAACCAGAACAGAACCTGGGATAGATTGTTTTaGATAGCAAATCCGGGTCATACAAGGGCAGCTAAG +
Preference number: 3 (lower is better)
Translates to: VANQNRTWDRLF*IANPGHTRAAK
Trigger: CTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCTATCCCAGGTTCTGTTCTGGTTGGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 72 bp CACACTTCCCTCCCTGCTGCCGCTATTATTCTACTCTaGTTAGGACTTTCTACTCCTAGGCTTCTTGTGTTA +
Preference number: 3 (lower is better)
Translates to: HTSLPAAAIILL*LGLSTPRLLVL
Trigger: TAACACAAGAAGCCTAGGAGTAGAAAGTCCTAAGCAGAGTAGAATAATAGCGGCAGCAGGGAGGGAAGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTGCAGGGCTACAGAGTaGACCTTACCAAGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDCRATE*TLPSCQ
Trigger: TTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGCA...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACCGAGACTTGTCATGTTaGAAAGTGCAAATGTCAATG +
Preference number: 3 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHRDLSC*KVQMSM
Trigger: CATTGACATTTGCACTTTCAAACATGACAAGTCTCG...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAACAGCAGCTCCGAGACTaGTCATGTTTGAAAGTGCAA +
Preference number: 3 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKQQLRD*SCLKVQ
Trigger: TTGCACTTTCAAACATGACAAGTCTCGGAGCTGCTG...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTGCTCCCTATGGACATTaGCAAATGCTGGTGAATGAC +
Preference number: 3 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRIAPYGH*QMLVND
Trigger: GTCATTCACCAGCATTTGCAAATGTCCATAGGGAGC...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp TTCCTTGCACTAACTCTTTCGTTTAGCCACCAAATCCTAATTGCCATGAGATTCGAGAACACAAACTTGTaGCTGGGAGTAGAGGCTGCC +
Preference number: 3 (lower is better)
Translates to: FLALTLSFSHQILIAMRFENTNL*LGVEAA
Trigger: GGCAGCCTCTACTCCCAGCAACAAGTTTGTGTTCTC...GAATCTCATGGCAATTAGGATTTGGTGGCTAAACGAAAGAGTTAGTGCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp CGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAATGGACATCTCTGGGCTaGGGGAACAGGTTCTTGGTC +
Preference number: 3 (lower is better)
Translates to: RKPENTSFPICLEGQIVKWTSLG*GNRFLV
Trigger: GACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCA...TTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATTCTCTAGTATAAGCTaGAGGGCAGTCCAGCCCAGG +
Preference number: 3 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQFSSIS*RAVQPR
Trigger: CCTGGGCTGGACTGCCCTCAAGCTTATACTAGAGAA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTGCCAATTTACAACACTaGGCCTCCAGAGGAATGCTA +
Preference number: 3 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRIANLQH*ASRGML
Trigger: TAGCATTCCTCTGGAGGCCAAGTGTTGTAAATTGGC...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp TCAACTGGTCAAAATCTGCTCCATGTCCAATCTGCTCTTCAAGTTCAACCAACCGCCAATTTACAACACTaGGCCTCCAGAGGAATGCTA +
Preference number: 3 (lower is better)
Translates to: STGQNLLHVQSALQVQPTANLQH*ASRGML
Trigger: TAGCATTCCTCTGGAGGCCAAGTGTTGTAAATTGGC...GGTTGGTTGAACTTGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTTAATGCCACCAAGTTaGACATTGATCTTGAGGCAG +
Preference number: 3 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGLMPPS*TLILRQ
Trigger: CTGCCTCAAGATCAATGTCAAACTTGGTGGCATTAA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR GCA 72 bp GCCGTATCTGTTGGAGCTTCCAGGGGAAGACTTCCTTaGTTTAGAAGGACACAGAAAAATCTGTCTCTCTTT +
Preference number: 3 (lower is better)
Translates to: AVSVGASRGRLP*FRRTQKNLSLF
Trigger: AAAGAGAGACAGATTTTTCTGTGTCCTTCTAAAGCAAGGAAGTCTTCCCCTGGAAGCTCCAACAGATACGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp TACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTaGGCACCTGAGTTCAAATCTCTTCTCCTAGACCAT +
Preference number: 3 (lower is better)
Translates to: YNPLTWAKIRVN*APEFKSLLLDH
Trigger: ATGGTCTAGGAGAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATGCAGGGCTACAGAGTaGACCTTACCAAGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQCRATE*TLPSCQ
Trigger: TTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGCA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp TTAGACATGGTGACAGTGATAAACCTTTGGGGTGGGCTAGTCTTTTTCAACATTTGCAGGGCTACAGAGTaGACCTTACCAAGCTGTCAA +
Preference number: 3 (lower is better)
Translates to: LDMVTVINLWGGLVFFNICRATE*TLPSCQ
Trigger: TTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGCA...AATGTTGAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGTCACCATGTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCAAAACCTAACCAGCTTTaGTCTGCAGGGCTACAGAGT +
Preference number: 3 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPKPNQL*SAGLQS
Trigger: ACTCTGTAGCCCTGCAGACAAAAGCTGGTTAGGTTT...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp TTAGACATGGTGACAGTGATAAACCTTTGGGGTGGGCTAGTCTTTTTCAACATTTTTCTGGCTGGAGGTTaGTTGGGTCTGGGGTATTTC +
Preference number: 3 (lower is better)
Translates to: LDMVTVINLWGGLVFFNIFLAGG*LGLGYF
Trigger: GAAATACCCCAGACCCAACAAACCTCCAGCCAGAAA...AATGTTGAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGTCACCATGTCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGAGGAAAAAGATGCACTaGCAAGAAAGAGTGCAGGAC +
Preference number: 3 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLRKKMH*QERVQD
Trigger: GTCCTGCACTCTTTCTTGCAAGTGCATCTTTTTCCT...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp CAACACCACTTCTCCATCTGCATGCACCACCTTTCAAACAGGAATAATCTCAAGGCTACGTTTTGTGAGTaGCTGAACAATGTAGCCAAC +
Preference number: 3 (lower is better)
Translates to: QHHFSICMHHLSNRNNLKATFCE*LNNVAN
Trigger: GTTGGCTACATTGTTCAGCAACTCACAAAACGTAGC...CTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAAGCTACGTTTTGTGAGTaGCTGAACAATGTAGCCAAC +
Preference number: 3 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKATFCE*LNNVAN
Trigger: GTTGGCTACATTGTTCAGCAACTCACAAAACGTAGC...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCACTCATTTCTTGTCATaGCCCAAAGCTGATTCTCTT +
Preference number: 3 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFTHFLS*PKADSL
Trigger: AAGAGAATCAGCTTTGGGCAATGACAAGAAATGAGT...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 72 bp TCGACTGTACACAATCCAAATCTTGGTAGCAGCATCTaGCAGGGTAAATACCAACTCTTGTGCAAGGGTCTT +
Preference number: 3 (lower is better)
Translates to: STVHNPNLGSSI*QGKYQLLCKGL
Trigger: AAGACCCTTGCACAAGAGTTGGTATTTACCCTGTCAGATGCTGCTACCAAGATTTGGATTGTGTACAGTCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp TATTTCAACTGGTCAAAATCTGCTCCATGTCCAATCTaGTCTTCAAGTTCAACCAACCTCCCTAACCCTTGC +
Preference number: 3 (lower is better)
Translates to: YFNWSKSAPCPI*SSSSTNLPNPC
Trigger: GCAAGGGTTAGGGAGGTTGGTTGAACTTGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp AGAAATAGTACAAAATCTCAGGTGCAGAGAAATCAGTaGGCTCTGAAAGTTGAACCTCCTCAGGAGCCATCA +
Preference number: 3 (lower is better)
Translates to: RNSTKSQVQRNQ*ALKVEPPQEPS
Trigger: TGATGGCTCCTGAGGAGGTTCAACTTTCAGAGCGCACTGATTTCTCTGCACCTGAGATTTTGTACTATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp ATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTaGCTTGGTAGCCCTTTGCCCAGTCTGTTATTTATT +
Preference number: 3 (lower is better)
Translates to: IYGGAPVSLLQY*LGSPLPSLLFI
Trigger: AATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp GAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCTaGGATAGATTGTTTTGCATAGCAAATCCGGGTCAT +
Preference number: 3 (lower is better)
Translates to: ELLNNVANQNRT*DRLFCIANPGH
Trigger: ATGACCCGGATTTGCTATGCAAAACAATCTATCCCAGGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 72 bp GTACATTACAGCTGCTGGGATAATTTCACAATGGACTaGACAAGGTACAGCTCAAAGCAGGACACAAACACA +
Preference number: 3 (lower is better)
Translates to: VHYSCWDNFTMD*TRYSSKQDTNT
Trigger: TGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTATCCCAGCAGCTGTAATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 72 bp GAACTGTACATTACAGCTGCTGGGATAATTTCACAATaGACTGGACAAGGTACAGCTCAAAGCAGGACACAA +
Preference number: 3 (lower is better)
Translates to: ELYITAAGIISQ*TGQGTAQSRTQ
Trigger: TTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTATCCCAGCAGCTGTAATGTACAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 72 bp ACTCCTAGGCTTCTTGTGTTAGACAAGAAACATCACTaGATGAGGAGAGCAACTGAGTACAATCCTCTCACA +
Preference number: 3 (lower is better)
Translates to: TPRLLVLDKKHH*MRRATEYNPLT
Trigger: TGTGAGAGGATTGTACTCAGTTGCTCTCCTCATCCAGTGATGTTTCTTGTCTAACACAAGAAGCCTAGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp AGCTCAATGAATGAGGAAGTCAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGTGGGGGACATGAGGTaGATATCAGAGATTTCTGGC +
Preference number: 3 (lower is better)
Translates to: SSMNEEVNSFKCKIAGFLVGDMR*ISEISG
Trigger: GCCAGAAATCTCTGATATCAACCTCATGTCCCCCAC...CAGAAAGCCAGCTATTTTGCATTTGAAGGAATTGACTTCCTCATTCATTGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAACTAACAGTGGGATCATaGCAGCCATGCAGAGATTTC +
Preference number: 3 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKLTVGS*QPCRDF
Trigger: GAAATCTCTGCATGGCTGCAATGATCCCACTGTTAG...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp TGCCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGGAATAAATGTTTACTTGCACAATTCTaGGAGGGTTTCCTATTTTCC +
Preference number: 3 (lower is better)
Translates to: CLLSRPRHFSAYHQRNKCLLAQF*EGFLFS
Trigger: GGAAAATAGGAAACCCTCCAAGAATTGTGCAAGTAA...ACATTTATTCCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAACCATCCATGCTGGACTaGAGAGGGATAAAAAGTTTA +
Preference number: 3 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKPSMLD*RGIKSL
Trigger: TAAACTTTTTATCCCTCTCAAGTCCAGCATGGATGG...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATAAAGTTGAAGTACCTTaGAGACCAGATGCTGCTTAT +
Preference number: 3 (lower is better)
Translates to: TILSHGPRLESTGHLSSNKVEVP*RPDAAY
Trigger: ATAAGCAGCATCTGGTCTCAAAGGTACTTCAACTTT...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp CCCTTTGCCCAGTCTGTTATTTATTTACTACTTGTGTaGCCCCCACCTCACTTGAATGTCAGGCAAATATTA +
Preference number: 3 (lower is better)
Translates to: PFAQSVIYLLLV*PPPHLNVRQIL
Trigger: TAATATTTGCCTGACATTCAAGTGAGGTGGGGGGCACACAAGTAGTAAATAAATAACAGACTGGGCAAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp CTGTTAGTCTACTACAGTATTGCCTTGGTAGCCCTTTaGCCAGTCTGTTATTTATTTACTACTTGTGTGCCC +
Preference number: 3 (lower is better)
Translates to: LLVYYSIALVAL*PVCYLFTTCVP
Trigger: GGGCACACAAGTAGTAAATAAATAACAGACTGGGCAAAGGGCTACCAAGGCAATACTGTAGTAGACTAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp TCAGGTACACAGTTCATTCTGATGGCTCAATGTTTCTaGGATATAAACTCATCAGGCATGGGAAGGATTTCC +
Preference number: 3 (lower is better)
Translates to: SGTQFILMAQCF*DINSSGMGRIS
Trigger: GGAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATGAACTGTGTACCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 72 bp TCGTTTAGCCACCAAATCCTAATTGCCATGAGATTCTaGGGTCTGCTACACCAAGAGATACCAAACAAATAC +
Preference number: 3 (lower is better)
Translates to: SFSHQILIAMRF*GLLHQEIPNKY
Trigger: GTATTTGTTTGGTATCTCTTGGTGTAGCAGACCCCAGAATCTCATGGCAATTAGGATTTGGTGGCTAAACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAAGTAAGAACTCATTTCTaGTCATTGCCCAAAGCTGAT +
Preference number: 3 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKVRTHF*SLPKAD
Trigger: ATCAGCTTTGGGCAATGACAAGAAATGAGTTCTTAC...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAAAAGAAACGTCCAACCTaGTTAGTTACACATGATTCC +
Preference number: 3 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKKKRPT*LVTHDS
Trigger: GGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp GCTTTAGAAGGACACAGAAAAATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAAGAAACGTCCAACCTaGTTAGTTACACATGATTCC +
Preference number: 3 (lower is better)
Translates to: ALEGHRKICLSFARHGSVKKRPT*LVTHDS
Trigger: GGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT...GACAGAACCGTGTCTGGCAAAAGAGAGACAGATTTTTCTGTGTCCTTCTAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp ATATTCGTTGTTGTAGCCTTATTCCACTCCCTCATTATCTTCCTCCTATGCCAGCCATCCATGCTGGACTaGAGAGGGATAAAAAGTTTA +
Preference number: 3 (lower is better)
Translates to: IFVVVALFHSLIIFLLCQPSMLD*RGIKSL
Trigger: TAAACTTTTTATCCCTCTCAAGTCCAGCATGGATGG...CTGGCATAGGAGGAAGATAATGAGGGAGTGGAATAAGGCTACAACAACGAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR GCA 72 bp CTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAAAGTaGCCTGCATATCCCTGCCATGATCAGATTTTAAGA +
Preference number: 3 (lower is better)
Translates to: LPNLLRRPNSKK*PAYPCHDQILR
Trigger: TCTTAAAATCTGATCATGGCAGGGATATGCAGGGCACTTTTTACTATTTGGCCTTCTAAGCAGATTGGGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR GCA 72 bp ACAAACTGTCTACCAGTGATCTGTCACCTTAAGATCTaGTTCCTCCCCCGAACCTTTAAATTGAGTTTCTTA +
Preference number: 3 (lower is better)
Translates to: TNCLPVICHLKI*FLPRTFKLSFL
Trigger: TAAGAAACTCAATTTAAAGGTTCGGGGGAGGAAGCAGATCTTAAGGTGACAGATCACTGGTAGACAGTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAACGAGACTTGTCATGTTaGAAAGTGCAAATGTCAATG +
Preference number: 3 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQRDLSC*KVQMSM
Trigger: CATTGACATTTGCACTTTCAAACATGACAAGTCTCG...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp CGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAAAGAACCTGGGATAGATaGTTTTGCATAGCAAATCCG +
Preference number: 3 (lower is better)
Translates to: RKPENTSFPICLEGQIVKRTWDR*FCIANP
Trigger: CGGATTTGCTATGCAAAACAATCTATCCCAGGTTCT...TTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp TCAGCTTCTTCCAGAATAGACATTAGACATGGTGACAGTGATAAACCTTTGGGGATGTACACCCTATATTaGGATAACTCATTCCCAACT +
Preference number: 3 (lower is better)
Translates to: SASSRIDIRHGDSDKPLGMYTLY*DNSFPT
Trigger: AGTTGGGAATGAGTTATCCAAATATAGGGTGTACAT...CCCCAAAGGTTTATCACTGTCACCATGTCTAATGTCTATTCTGGAAGAAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 72 bp TGCTTTCTCCATAATGAATGTTTGTGCTACGTTTTGTaGGTTGCTGAACAATGTAGCCAACCAGAACAGAAC +
Preference number: 3 (lower is better)
Translates to: CFLHNECLCYVL*VAEQCSQPEQN
Trigger: GTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGTAGCACAAACATTCATTATGGAGAAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR-3UTR CAA 90 bp CGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAAACGAGACTTGTCATGTTaGAAAGTGCAAATGTCAATG +
Preference number: 3 (lower is better)
Translates to: RKPENTSFPICLEGQIVKRDLSC*KVQMSM
Trigger: CATTGACATTTGCACTTTCAAACATGACAAGTCTCG...TTTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
3UTR CCA 72 bp CTCACTCGGAGTCATAAATTTATGTCTTATTTCAACTaGTCAAAATCTGCTCCATGTCCAATCTGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: LTRSHKFMSYFN*SKSAPCPICSS
Trigger: TGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGAAATAAGACATAAATTTATGACTCCGAGTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CCA 72 bp GTTACTTTATACTCTAGCAAGATACAATATAAAACATaGGCTTTAGGGACAGACACAGCTAACACTGAAGGC +
Preference number: 3 (lower is better)
Translates to: VTLYSSKIQYKT*ALGTDTANTEG
Trigger: GCCTTCAGTGTTAGCTGTGTCTGTCCCTAAAGCCCATGTTTTATATTGTATCTTGCTAGAGTATAAAGTAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR-3UTR CAA 90 bp CCCACAAACACCTCAAAACTCAGTCTATACAACATTCTGTTTCTTCAAAAACTCTTTCATTTTTCCTTATaGCTACTACACCAAGGGACT +
Preference number: 3 (lower is better)
Translates to: PTNTSKLSLYNILFLQKLFHFSL*LLHQGT
Trigger: AGTCCCTTGGTGTAGTAGCAATAAGGAAAAATGAAA...GAGTTTTTGAAGAAACAGAATGTTGTATAGACTGAGTTTTGAGGTGTTTGTGGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR TCA 72 bp AAAAATTTCAAGAAACTGAGTCTTTGGTGTTATCACTaGGCCACTGAATTAACCAACCTTGGAGTAACATTA +
Preference number: 3 (lower is better)
Translates to: KNFKKLSLWCYH*ATELTNLGVTL
Trigger: TAATGTTACTCCAAGGTTGGTTAATTCAGTGGCTCAGTGATAACACCAAAGACTCAGTTTCTTGAAATTTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACGCTTTGGCCAGGGCCTaGGGGTCCCGCCCATTGCTC +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHALARA*GSRPLL
Trigger: GAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGC...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACGATTGGGTGTGGCAATaGCCCGGTTCCGGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHDWVWQ*PGSGRR
Trigger: ACGGCGGCCGGAACCGGGCCATTGCCACACCCAATC...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGCGCGCTGAGAGTCCGTaGGGGGCTTGGGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRRAESP*GAWAAH
Trigger: ATGAGCAGCCCAAGCCCCTCACGGACTCTCAGCGCG...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACGGTGGGCACCAGTGCTaGCCCTTTTGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHGGHQC*PFWSSG
Trigger: CCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACC...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTGGCCGGCGAGGTGCCTaGAACACCTGCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAGRRGA*NTCCRG
Trigger: CCCCCTGCAGCAGGTGTTCCAGGCACCTCGCCGGCC...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACCACCCTGATTGGGTGTaGCAATGGCCCGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHHPDWV*QWPGSG
Trigger: GCCGGAACCGGGCCATTGCCACACCCAATCAGGGTG...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTCCCCGAGTTCTGCGTaGGCCTCACGCACTCCTGAG +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHSPSSA*ASRTPE
Trigger: CTCAGGAGTGCGTGAGGCCCACGCAGAACTCGGGGA...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373206.5
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTACGCCGTACTGCAAGATaGGCGCCGGCAGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLRRTAR*APAALA
Trigger: GGCGAGTGCTGCCGGCGCCCATCTTGCAGTACGGCG...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTACAGGGATCTGGCCGCTaGCCAGGGCCTCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLQGSGR*PGPHAA
Trigger: TGCTGCATGAGGCCCTGGTCAGCGGCCAGATCCCTG...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTATGCAGCAGCTCCCACTaGGAGCGCCCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELCSSSH*ERPASC
Trigger: GCAGCTGGCCGGGCGCTCGCAGTGGGAGCTGCTGCA...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCACATCCCATATACCCGTaGGGAGGTCAGGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAHPIYP*GGQAAR
Trigger: CCGGGCCGCCTGACCTCCGCACGGGTATATGGGATG...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHRHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTGAAGCGAACGCGCTaGGAGTCCGTGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAVKRTR*ESVRGL
Trigger: CAAGCCCCTCACGGACTCTCAGCGCGTTCGCTTCAC...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTACGCAGAGTATCCTGGTaGACCTGCACGGCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLRRVSW*TCTALA
Trigger: GGCCAAAGCCGTGCAGGTTCACCAGGATACTCTGCG...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCATGCAGCAGCTCCCACTaGGAGCGCCCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKACSSSH*ERPASC
Trigger: GCAGCTGGCCGGGCGCTCGCAGTGGGAGCTGCTGCA...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTATGCAGCAGCTCCCACTaGGAGCGCCCGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALCSSSH*ERPASC
Trigger: GCAGCTGGCCGGGCGCTCGCAGTGGGAGCTGCTGCA...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCACGCCGCCGCGGAGCCTaGAGCAGCTCCCACTGCGAG +
Preference number: 4 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPRRRGA*SSSHCE
Trigger: CTCGCAGTGGGAGCTGCTGCAGGCTCCGCGGCGGCG...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACACACTGTTTTTGGGGTaGGAAGCAGGCGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHTLFLG*EAGDGP
Trigger: TGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGGGGTCCCGCCCATTaGTCTGCCCCGATATGTGGC +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQGGPAH*SAPICG
Trigger: GCCACATATCGGGGCAGAGCAATGGGCGGGACCCCC...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACCACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGATTGGGTGTGGCAATaGCCCGGTTCCGGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQDWVWQ*PGSGRR
Trigger: ACGGCGGCCGGAACCGGGCCATTGCCACACCCAATC...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGGGTCGGCTGGTGCCCTaGATGCCTGCGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQGRLVP*MPAWLH
Trigger: GTGCAGCCACGCAGGCATCCAGGGCACCAGCCGACC...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGCATGGGGCTGGCTaGCTCTTTCCCAAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRKHGAG*LFPKGV
Trigger: GACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTT...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGCGCGCTGAGAGTCCGTaGGGGGCTTGGGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWRAESP*GAWAAH
Trigger: ATGAGCAGCCCAAGCCCCTCACGGACTCTCAGCGCG...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTACGCGCTGAGAGTCCGTaGGGGGCTTGGGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELRAESP*GAWAAH
Trigger: ATGAGCAGCCCAAGCCCCTCACGGACTCTCAGCGCG...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGGCCACATCCAGGGCTTaGACAGACTCCAAGGGAACA +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRATSRA*TDSKGT
Trigger: TGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGC...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTTTCCGGCCGCCGTACTaGAAGATGGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSFRPPY*KMGAGS
Trigger: GCTGCCGGCGCCCATCTTGCAGTACGGCGGCCGGAA...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGCACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCGGCCGGCGAGGTGCCTaGAACACCTGCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPGRRGA*NTCCRG
Trigger: CCCCCTGCAGCAGGTGTTCCAGGCACCTCGCCGGCC...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTAATGCCAGGTGCCTCATaGCCACATCCAGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLMPGAS*PHPGLA
Trigger: TGCAAGCCCTGGATGTGGCCATGAGGCACCTGGCAT...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTCGCCGTACTGCAAGATaGGCGCCGGCAGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSRRTAR*APAALA
Trigger: GGCGAGTGCTGCCGGCGCCCATCTTGCAGTACGGCG...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGGATTGGGTGTGGCAATaGCCCGGTTCCGGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWDWVWQ*PGSGRR
Trigger: ACGGCGGCCGGAACCGGGCCATTGCCACACCCAATC...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAGTATCTGGGGTAGCTaGCCTTCAGGCACCCCATCT +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRSIWGS*PSGTPS
Trigger: AGATGGGGTGCCTGAAGGCCAGCTACCCCAGATACT...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAGGTCGGCTGGTGCCCTaGATGCCTGCGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALGRLVP*MPAWLH
Trigger: GTGCAGCCACGCAGGCATCCAGGGCACCAGCCGACC...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGGTCGGCTGGTGCCCTaGATGCCTGCGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAGRLVP*MPAWLH
Trigger: GTGCAGCCACGCAGGCATCCAGGGCACCAGCCGACC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTACTCTGCCCCGATATGTaGCTCCCCTCTCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLLCPDM*LPSPLS
Trigger: TGACAGTGGAGAGGGGAGCCACATATCGGGGCAGAG...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGCTTTGGCCAGGGCCTaGGGGTCCCGCCCATTGCTC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAALARA*GSRPLL
Trigger: GAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTATCCTCTGGATTTGGGTaGCACAGCTCCTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLSSGFG*HSSWGL
Trigger: CAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAGGA...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTTTACAGGGAAGGCACTaGTTACCCACCAGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLALQGRH*LPTSGR
Trigger: CCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAA...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCCCCTCCCTTTCTTaGATGCCCAAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHFPSLS*MPKQQP
Trigger: TGGCTGCTGTTTGGGCATCCAAGAAAGGGAGGGGAA...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCGGACAGGCAGAGAACTaGTCCCTCGGGCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPGQAEN*SLGHRP
Trigger: GGGCCTGTGCCCGAGGGACCAGTTCTCTGCCTGTCC...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACCGATCACCAAAGATCTaGGGCTTGAAATGCTGGACC +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHRSPKI*GLKCWT
Trigger: GGTCCAGCATTTCAAGCCTCAGATCTTTGGTGATCG...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGTAGCCCTCAGGCGGTaGGAAGAAGGAGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAVALRR*EEGAAH
Trigger: GTGGGCCGCTCCTTCTTCTCACCGCCTGAGGGCTAC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCATGTAAGGGGAATGTCTaGTGGCTAGCAGGGCGACGG +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSACKGNV*WLAGRR
Trigger: CCGTCGCCCTGCTAGCCATCAGACATTCCCCTTACA...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGTCTTCATCAGGCGACTaGTCTCCTCCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRSSSGD*SPPVCL
Trigger: CAGACAGACAGGAGGAGATCAGTCGCCTGATGAAGA...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACAATGAGCTGCAGCCCTaGGTAGGTGTTCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHNELQP*VGVLEM
Trigger: CATCTCAAGAACACCTACTCAGGGCTGCAGCTCATT...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACAATATCACTGGCTGTTaGAAAACGGCAGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHNITGC*KTAERW
Trigger: CCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATT...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAACAAATACCCAGCCTaGCTACCCCAAGGCAACTGC +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRNKYPA*LPQGNC
Trigger: GCAGTTGCCTTGGGGTAGTCAGGCTGGGTATTTGTT...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTCAGGCCCCCACCCTGTaGGGCATCCTGGGCACGGAG +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGQAPTL*GILGTE
Trigger: CTCCGTGCCCAGGATGCCTCACAGGGTGGGGGCCTG...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCACCCCACACTCTCGCTaGTCGGGATCCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFTPHSR*SGSRAG
Trigger: CCCGGCCCGGGATCCCGAGCAGCGAGAGTGTGGGGT...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTATCCCCACAGTGCCAATaGCAGGCCGGCGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVSPQCQ*QAGEVP
Trigger: AGGCACCTCGCCGGCCTGGCATTGGCACTGTGGGGA...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR GCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAATCCCCACAGTGCCAATaGCAGGCCGGCGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKSPQCQ*QAGEVP
Trigger: AGGCACCTCGCCGGCCTGGCATTGGCACTGTGGGGA...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCACTGACCAGGGCCTCATaGAGCATTCGCCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSALTRAS*SIRQLT
Trigger: TGTGAGCTGGCGAATGCTGCATGAGGCCCTGGTCAG...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACTTCCGGCCGCCGTACTaGAAGATGGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHFRPPY*KMGAGS
Trigger: GCTGCCGGCGCCCATCTTGCAGTACGGCGGCCGGAA...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGGGGGTCCCGCCCATTaGTCTGCCCCGATATGTGGC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAGGPAH*SAPICG
Trigger: GCCACATATCGGGGCAGAGCAATGGGCGGGACCCCC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCATGCCACCCACCCACATaGCCTAGTGGGAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSACHPPT*PSGKPG
Trigger: TCCTGGTTTCCCACTAGGGCATGTGGGTGGGTGGCA...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGCTGGGAGTAGAGGCTaGCACCTGCTCCCTATGGAC +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQAGSRG*HLLPMD
Trigger: GTCCATAGGGAGCAGGTGGCAGCCTCTACTCCCAGC...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGCCAGCTAATAGTCAGTaGACCCTTGGCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRPANSQ*TLGCPS
Trigger: AGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGG...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGGGCCGGCGAGGTGCCTaGAACACCTGCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWGRRGA*NTCCRG
Trigger: CCCCCTGCAGCAGGTGTTCCAGGCACCTCGCCGGCC...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAACCCAGACACCCTGATTaGGTGTGGCAATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQPRHPD*VWQWPG
Trigger: ACCGGGCCATTGCCACACCCAATCAGGGTGTCTGGG...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATGGTCGGCTGGTGCCCTaGATGCCTGCGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ILSACRKDRVASCRFKCHGRLVP*MPAWLH
Trigger: GTGCAGCCACGCAGGCATCCAGGGCACCAGCCGACC...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTACACCTGTGTGTATGGTaGGCACCAGTGCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLHLCVW*APVLPL
Trigger: AAGGGGCAGCACTGGTGCCCACCATACACACAGGTG...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTACCAGGTGGACATCTCTaGGCTTGGGGAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLPGGHL*AWGTGS
Trigger: AGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGG...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAGGCACGGAGGAGCCCTaGCCTCATGGATGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVGTEEP*PHGCQV
Trigger: CACCTGGCATCCATGAGGCCAGGGCTCCTCCGTGCC...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CAA 72 bp CGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTaGGCTTCCAATTCTCCCAACGGGCCAACCGCTGCT +
Preference number: 4 (lower is better)
Translates to: RKWAPPVLQLYW*ASNSPNGPTAA
Trigger: AGCAGCGGTTGGCCCGTTGGGAGAATTGGAAGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTCAGGGATCTGGCCGCTaGCCAGGGCCTCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFQGSGR*PGPHAA
Trigger: TGCTGCATGAGGCCCTGGTCAGCGGCCAGATCCCTG...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATGTAGCCCTCAGGCGGTaGGAAGAAGGAGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ILSACRKDRVASCRFKCHVALRR*EEGAAH
Trigger: GTGGGCCGCTCCTTCTTCTCACCGCCTGAGGGCTAC...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTAGTAGCCCTCAGGCGGTaGGAAGAAGGAGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVVALRR*EEGAAH
Trigger: GTGGGCCGCTCCTTCTTCTCACCGCCTGAGGGCTAC...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCAGTAGCCCTCAGGCGGTaGGAAGAAGGAGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPVALRR*EEGAAH
Trigger: GTGGGCCGCTCCTTCTTCTCACCGCCTGAGGGCTAC...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGGGCGCACAGACTGGTaGAAGCCGAACCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSGRTDW*KPNQTS
Trigger: CGAGGTCTGGTTCGGCTTTCACCAGTCTGTGCGCCC...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR TCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGGGCGCACAGACTGGTaGAAGCCGAACCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKGRTDW*KPNQTS
Trigger: CGAGGTCTGGTTCGGCTTTCACCAGTCTGTGCGCCC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGTGAAGCGAACGCGCTaGGAGTCCGTGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAVKRTR*ESVRGL
Trigger: CAAGCCCCTCACGGACTCTCAGCGCGTTCGCTTCAC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACCGATGGCCCAGACTTTaGTCTCAATCCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHRWPRL*SQSHCR
Trigger: TCTACAATGGGATTGAGATCAAAGTCTGGGCCATCG...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTAACTCAAATGGGTGGGTaGTGTTGGTGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLTQMGG*CWCPLW
Trigger: CCACAGTGGACACCAACATCACCCACCCATTTGAGT...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCCGCAGAGTATCCTGGTaGACCTGCACGGCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPRRVSW*TCTALA
Trigger: GGCCAAAGCCGTGCAGGTTCACCAGGATACTCTGCG...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTACTTGGCTGCCCATCTTaGGTGCTGGCCTTATTCACA +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLLGCPS*VLALFT
Trigger: TGTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAG...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACAAAGGCAAAGCTGTATaGGGCTCTCTCCTGACTACA +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHKGKAV*GSLLTT
Trigger: TGTAGTCAGGAGAGAGCCTCATACAGCTTTGCCTTT...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAATACTGTGCCACTGTaGACTCCACAGTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRNTVPL*TPQSVH
Trigger: GTGGACAGACTGTGGAGTGCACAGTGGCACAGTATT...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTTCCGGCCGCCGTACTaGAAGATGGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGFRPPY*KMGAGS
Trigger: GCTGCCGGCGCCCATCTTGCAGTACGGCGGCCGGAA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTATCTTCAATGATCTCTTaGCGTGGTCGCTGTACCCGC +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLSSMIS*RGRCTR
Trigger: GCGGGTACAGCGACCACGGCAAGAGATCATTGAAGA...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATATGGTGGGCACCAGTaGTGCCCCTTTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLYGGHQ*CPFWSS
Trigger: ACTGGACCAAAAGGGGCAGCACTGGTGCCCACCATA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCACCCTGGCCTCATGGATaGCAGGTGCCTCATGGCCAC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAPWPHG*QVPHGH
Trigger: GTGGCCATGAGGCACCTGGCATCCATGAGGCCAGGG...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCAAGGGAACAGGGATCTaGCCGCTGACCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPKGTGI*PLTRAS
Trigger: TGAGGCCCTGGTCAGCGGCCAGATCCCTGTTCCCTT...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGCCCAGACACCCTGATTaGGTGTGGCAATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQPRHPD*VWQWPG
Trigger: ACCGGGCCATTGCCACACCCAATCAGGGTGTCTGGG...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTGCTTTGGCCAGGGCCTaGGGGTCCCGCCCATTGCTC +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGALARA*GSRPLL
Trigger: GAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGC...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTTGCACAGAGGAAGGATaGAGCCTGGACCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLACTEEG*SLDPIL
Trigger: CAAGATGGGGTCCAGGCTCCATCCTTCCTCTGTGCA...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CAA 72 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTaGGTCTTCTGCAGTCAAGGAGCTAAGCCTGACCCT +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRF*VFCSQGAKPDP
Trigger: AGGGTCAGGCTTAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGCAGGGATCTGGCCGCTaGCCAGGGCCTCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWQGSGR*PGPHAA
Trigger: TGCTGCATGAGGCCCTGGTCAGCGGCCAGATCCCTG...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATGTGAAGCGAACGCGCTaGGAGTCCGTGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: ILSACRKDRVASCRFKCHVKRTR*ESVRGL
Trigger: CAAGCCCCTCACGGACTCTCAGCGCGTTCGCTTCAC...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGTCTGTCCACAGTGGGTaGCTTCCACCTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWSVHSG*LPPSGP
Trigger: AGGGCCTGAAGGTGGAAGTCACCCACTGTGGACAGA...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGTAAGGGGAATGTCTaGTGGCTAGCAGGGCGACGG +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQCKGNV*WLAGRR
Trigger: CCGTCGCCCTGCTAGCCATCAGACATTCCCCTTACA...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR TCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTAAATATCACTGGCTGTTaGAAAACGGCAGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLNITGC*KTAERW
Trigger: CCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATT...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACGTACACAGTTCATTCTaGTGGCTCAATGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHVHSSF*WLNVSG
Trigger: CCCAGAAACATTGAGCCATCAGAATGAACTGTGTAC...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTATCAACGAAAGACATCTaGGACGCCTTTTCCGGACCA +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLSTKDI*DAFSGP
Trigger: TGGTCCGGAAAAGGCGTCTCAGATGTCTTTCGTTGA...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTACCCCACACTCTCGCTaGTCGGGATCCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QFLQMQNSWLSGWRFVGSTPHSR*SGSRAG
Trigger: CCCGGCCCGGGATCCCGAGCAGCGAGAGTGTGGGGT...AGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTTTGGTTTCCCCACAGTaGCAATGCCAGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSLVSPQ*QCQAGE
Trigger: CTCGCCGGCCTGGCATTGGCACTGTGGGGAAACCAA...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR GCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCCTGACCAGGGCCTCATaGAGCATTCGCCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPLTRAS*SIRQLT
Trigger: TGTGAGCTGGCGAATGCTGCATGAGGCCCTGGTCAG...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGCTCATGGATGCCAGGTaGCTCATGGCCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQLMDAR*LMATSR
Trigger: CCTGGATGTGGCCATGAGGCACCTGGCATCCATGAG...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATACTCATGGATGCCAGGTaGCTCATGGCCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMILMDAR*LMATSR
Trigger: CCTGGATGTGGCCATGAGGCACCTGGCATCCATGAG...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAGTGAGGGGCTTGGGCTaGTCATCTATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLVRGLG*SSMFLM
Trigger: CATCAGGAACATAGATGAGCAGCCCAAGCCCCTCAC...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTGGGGGTCCCGCCCATTaGTCTGCCCCGATATGTGGC +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGGGPAH*SAPICG
Trigger: GCCACATATCGGGGCAGAGCAATGGGCGGGACCCCC...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGGGGGGTCCCGCCCATTaGTCTGCCCCGATATGTGGC +
Preference number: 4 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWGGPAH*SAPICG
Trigger: GCCACATATCGGGGCAGAGCAATGGGCGGGACCCCC...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGCTGGTGGTCTGTCTTaGTGGCCCTGTTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKAGGLS*WPCSPL
Trigger: GAGTGGGGAACAGGGCCAGCAAGACAGACCACCAGC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTAGGTGGGCACCAGTGCTaGCCCTTTTGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVGGHQC*PFWSSG
Trigger: CCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACC...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGATGCCAGGTGCCTCATaGCCACATCCAGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQMPGAS*PHPGLA
Trigger: TGCAAGCCCTGGATGTGGCCATGAGGCACCTGGCAT...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACATCATGGTCGAGGTCTaGTTGTCGGTCAGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHIMVEV*LSVSFL
Trigger: TAAAAAGCTGACCGACAACCAGACCTCGACCATGAT...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTAGATTGGGTGTGGCAATaGCCCGGTTCCGGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVDWVWQ*PGSGRR
Trigger: ACGGCGGCCGGAACCGGGCCATTGCCACACCCAATC...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTAAAACGGCAGAGCGCTaGTGTGGGACTAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAKTAER*CGTRML
Trigger: CAACATCCTAGTCCCACACCAGCGCTCTGCCGTTTT...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGGGTCGGCTGGTGCCCTaGATGCCTGCGTGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRGRLVP*MPAWLH
Trigger: GTGCAGCCACGCAGGCATCCAGGGCACCAGCCGACC...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAAATGGGATGGTCGGCTaGTGCCCTGGATGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVNGMVG*CPGCLR
Trigger: ACGCAGGCATCCAGGGCACCAGCCGACCATCCCATT...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTCCTCTGGATTTGGGTaGCACAGCTCCTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQSSGFG*HSSWGL
Trigger: CAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAGGA...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAACCTCCTTGCTTCCTCTaGATTTGGGTGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQPPCFL*IWVAQL
Trigger: GAGCTGTGCCACCCAAATCCAGAGGAAGCAAGGAGG...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGGAGGTTTGTTGGGTCTaGGGTATTTCTTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGREVCWV*GISSPS
Trigger: AGATGGGGAAGAAATACCCCAGACCCAACAAACCTC...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCGCCTGGACCCCATCTTaGGGCGATAACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPAWTPS*GDNHPL
Trigger: GAGGGGGTGGTTATCGCCCCAAGATGGGGTCCAGGC...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCATTCCAGCTACCATCCTaGATTGGCCTAGGCCCCATA +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAFQLPS*IGLGPI
Trigger: TATGGGGCCTAGGCCAATCCAGGATGGTAGCTGGAA...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATTCCCCTCCCTTTCTTaGATGCCCAAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLFPSLS*MPKQQP
Trigger: TGGCTGCTGTTTGGGCATCCAAGAAAGGGAGGGGAA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATGCTTTTGGTTCCCTTaGCCAGGAACCCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLCFWFP*PGTLSL
Trigger: GAGAGAGAGGGTTCCTGGCCAAGGGAACCAAAAGCA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAGAGCTTCTCTGCTTTTaGTTCCCTTGGCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLELLCF*FPWPGT
Trigger: GGTTCCTGGCCAAGGGAACCAAAAGCAGAGAAGCTC...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTAAACGCACGGCGTAAATaGGCCCCGCCTGTGCTACAG +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLNARRK*APPVLQ
Trigger: CTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTT...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAGCTCATCTATGTTCCTaGTGTCCAGCACCTCACACA +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLAHLCS*CPAPHT
Trigger: TGTGTGAGGTGCTGGACATCAGGAACATAGATGAGC...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTGTGAAGCGAACGCGCTaGGAGTCCGTGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSVKRTR*ESVRGL
Trigger: CAAGCCCCTCACGGACTCTCAGCGCGTTCGCTTCAC...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTGGGGATACTTGAGCTaGAGGTTATATTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHWGYLS*RLYFCL
Trigger: CAAGCAGAAATATAACCTTCAGCTCAAGTATCCCCA...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAATGAGCTGCAGCCCTaGGTAGGTGTTCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLNELQP*VGVLEM
Trigger: CATCTCAAGAACACCTACTCAGGGCTGCAGCTCATT...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAAGGACAAGTCTTCAATaGTCTCTTGCCGTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSARTSLQ*SLAVVA
Trigger: AGCGACCACGGCAAGAGATCATTGAAGACTTGTCCT...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGCGCAGAGTATCCTGGTaGACCTGCACGGCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: YQILSACRKDRVASCRFKRRVSW*TCTALA
Trigger: GGCCAAAGCCGTGCAGGTTCACCAGGATACTCTGCG...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCCGCAGAGTATCCTGGTaGACCTGCACGGCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPRRVSW*TCTALA
Trigger: GGCCAAAGCCGTGCAGGTTCACCAGGATACTCTGCG...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GCGAAAACCAGAAAATACCTCCTTCCCAATCTGCTTAGAAGGCCAAATAGTAAACGCCGCCGCGGAGCCTaGAGCAGCTCCCACTGCGAG +
Preference number: 4 (lower is better)
Translates to: AKTRKYLLPNLLRRPNSKRRRGA*SSSHCE
Trigger: CTCGCAGTGGGAGCTGCTGCAGGCTCCGCGGCGGCG...TTTACTATTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATACCCCACACTCTCGCTaGTCGGGATCCCGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDTPHSR*SGSRAG
Trigger: CCCGGCCCGGGATCCCGAGCAGCGAGAGTGTGGGGT...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCATTGGTTTCCCCACAGTaGCAATGCCAGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPLVSPQ*QCQAGE
Trigger: CTCGCCGGCCTGGCATTGGCACTGTGGGGAAACCAA...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTACTCATGGATGCCAGGTaGCTCATGGCCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVLMDAR*LMATSR
Trigger: CCTGGATGTGGCCATGAGGCACCTGGCATCCATGAG...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTACTCATGGATGCCAGGTaGCTCATGGCCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALLMDAR*LMATSR
Trigger: CCTGGATGTGGCCATGAGGCACCTGGCATCCATGAG...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTACTCAATCACTGGCTGTaGCTTATAAAAGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLLNHWL*LIKGSG
Trigger: GCCACTGCCTTTTATAAGGCACAGCCAGTGATTGAG...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGTGAGGGGCTTGGGCTaGTCATCTATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQVRGLG*SSMFLM
Trigger: CATCAGGAACATAGATGAGCAGCCCAAGCCCCTCAC...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGTTCCGGCCGCCGTACTaGAAGATGGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLFRPPY*KMGAGS
Trigger: GCTGCCGGCGCCCATCTTGCAGTACGGCGGCCGGAA...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGACACTGTTTTTGGGGTaGGAAGCAGGCGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWTLFLG*EAGDGP
Trigger: TGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTCCCGCCCATTGCTCTaGCCCGATATGTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGSRPLL*PDMWLP
Trigger: GGGGAGCCACATATCGGGGCAGAGCAATGGGCGGGA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGCACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAAAGGTTGCAGTTCTaGAGCATTACCGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRKRLQF*SITVTG
Trigger: CCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTT...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATATCCAAGTGGAGAACATaGAGAGCCCACTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMISKWRT*RAHCPR
Trigger: CCTGGGACAGTGGGCTCTGCATGTTCTCCACTTGGA...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAATTTCCCAAGGGAGTCTaGCAGATGATAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQFPKGV*QMIATG
Trigger: GCCTGTGGCTATCATCTGGCAGACTCCCTTGGGAAA...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTACACTTCCCTCCCTGCTaGCGCTATTATTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLHFPPC*RYYSTL
Trigger: CAGAGTAGAATAATAGCGGCAGCAGGGAGGGAAGTG...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTGACTTGGAGCTTCTCTaGTTTTGGTTCCCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLADLELL*FWFPWP
Trigger: TGGCCAAGGGAACCAAAAGCAGAGAAGCTCCAAGTC...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCAGGCCGGCGAGGTGCCTaGAACACCTGCTGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPGRRGA*NTCCRG
Trigger: CCCCCTGCAGCAGGTGTTCCAGGCACCTCGCCGGCC...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAATGCCAGGTGCCTCATaGCCACATCCAGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAMPGAS*PHPGLA
Trigger: TGCAAGCCCTGGATGTGGCCATGAGGCACCTGGCAT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAACTGTGGCCTTTATCATaGTCGAGGTCTGGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQLWPLS*SRSGCR
Trigger: CCGACAACCAGACCTCGACCATGATAAAGGCCACAG...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTCGCCGTACTGCAAGATaGGCGCCGGCAGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: QFLQMQNSWLSGWRFVGSRRTAR*APAALA
Trigger: GGCGAGTGCTGCCGGCGCCCATCTTGCAGTACGGCG...AGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTACACCCTGATTGGGTGTaGCAATGGCCCGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVHPDWV*QWPGSG
Trigger: GCCGGAACCGGGCCATTGCCACACCCAATCAGGGTG...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAATCTCGACACTGTTTTTaGGGTGCGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQSRHCF*GAKQAM
Trigger: CATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGA...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATAATGGGATGGTCGGCTaGTGCCCTGGATGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: ILSACRKDRVASCRFKCHNGMVG*CPGCLR
Trigger: ACGCAGGCATCCAGGGCACCAGCCGACCATCCCATT...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTTCCTTGTCCACCAGGTaGTATCGTGCCCGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSSLSTR*YRARKA
Trigger: GGCTTTCCGGGCACGATACCACCTGGTGGACAAGGA...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAACTCTGCCCCGATATGTaGCTCCCCTCTCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKLCPDM*LPSPLS
Trigger: TGACAGTGGAGAGGGGAGCCACATATCGGGGCAGAG...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCAACTGGTCAAAATCTGCTCCATGTCCAATCTGCTCTTCAAGTTCAACCAACCGCTTTGGCCAGGGCCTaGGGGTCCCGCCCATTGCTC +
Preference number: 4 (lower is better)
Translates to: STGQNLLHVQSALQVQPTALARA*GSRPLL
Trigger: GAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGC...GGTTGGTTGAACTTGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTATGCTTCCTCTGGATTTaGGTGGCACAGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLCFLWI*VAQLLG
Trigger: CCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGCA...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTACCTCCTTGCTTCCTCTaGATTTGGGTGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELPPCFL*IWVAQL
Trigger: GAGCTGTGCCACCCAAATCCAGAGGAAGCAAGGAGG...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCCACCTGTGTGTATGGTaGGCACCAGTGCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSHLCVW*APVLPL
Trigger: AAGGGGCAGCACTGGTGCCCACCATACACACAGGTG...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSRHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATGGCTGGAGGTTTGTTaGGTCTGGGGTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLWLEVC*VWGISS
Trigger: GGAAGAAATACCCCAGACCCAACAAACCTCCAGCCA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTACCAGGTGGACATCTCTaGGCTTGGGGAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELPGGHL*AWGTGS
Trigger: AGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGG...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCACACATGCCCACCACATaGCTGCTAAGTGCAACATCA +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAHMPTT*LLSATS
Trigger: TGATGTTGCACTTAGCAGCCATGTGGTGGGCATGTG...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTGGAGCCCTGGCCTCATaGATGCCAGGTGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGGALAS*MPGASW
Trigger: CCATGAGGCACCTGGCATCCATGAGGCCAGGGCTCC...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
3UTR CAA 72 bp GCCCAGGCTCCTCAAAGAGGAAATTCCACACTGAAGTaGCAACTCCCCATCCCAAGCAGTGGGGCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: AQAPQRGNSTLK*QLPIPSSGAGK
Trigger: TTTTCCTGCCCCACTGCTTGGGATGGGGAGTTGCAACTTCAGTGTGGAATTTCCTCTTTGAGGAGCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTACCACCACTTCCCGGTTaGCTCTACGGGGACACTTAT +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVPPLPG*LYGDTY
Trigger: ATAAGTGTCCCCGTAGAGTCAACCGGGAAGTGGTGG...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR TCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGGGGCGCACAGACTGGTaGAAGCCGAACCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRGRTDW*KPNQTS
Trigger: CGAGGTCTGGTTCGGCTTTCACCAGTCTGTGCGCCC...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGATTGTTTTGCATAGCAAATCCGGGTCATACAAGGGCAGCTAAGGGGAGGAAAGTGAAGCGAACGCGCTaGGAGTCCGTGAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RLFCIANPGHTRAAKGRKVKRTR*ESVRGL
Trigger: CAAGCCCCTCACGGACTCTCAGCGCGTTCGCTTCAC...TTTCCTCCCCTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGGCAGATGGGGATACTTaGGCTGAAGGTTATATTTCT +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRADGDT*AEGYIS
Trigger: AGAAATATAACCTTCAGCTCAAGTATCCCCATCTGC...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTACGATGGCCCAGACTTTaGTCTCAATCCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLRWPRL*SQSHCR
Trigger: TCTACAATGGGATTGAGATCAAAGTCTGGGCCATCG...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCTCTGAGGTGAGGTCTTaGCCACGTTCTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPSEVRS*PRSSPA
Trigger: TGCAGGTGAAGAACGTGGTCAAGACCTCACCTCAGA...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTAGGACAGAGTCTGAGGTaGGGTCTTGACCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELGQSLR*GLDHVL
Trigger: AAGAACGTGGTCAAGACCTCACCTCAGACTCTGTCC...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGGCAGGGCTACAGAGTTaGCCTTACCAAGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWAGLQS*PYQAVK
Trigger: CTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGC...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAATTTGCAAATGCTGGTaGATGACTGGACCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQICKCW*MTGPSR
Trigger: CCTGGAGGGTCCAGTCATTCACCAGCATTTGCAAAT...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAATTTCAAGCCCCAGCTaGAAACCAACTGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLISSPS*KPTGES
Trigger: ACTCTCTCCAGTTGGTTTTCAGCTGGGGCTTGAAAT...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTACCTCCAACTTGGGGTaGGTGGGAAAAGACAATGAT +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLATSNLG*VGKDND
Trigger: ATCATTGTCTTTTCCCACTCACCCCAAGTTGGAGGT...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGAACAAATACCCAGCCTaGCTACCCCAAGGCAACTGC +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQNKYPA*LPQGNC
Trigger: GCAGTTGCCTTGGGGTAGTCAGGCTGGGTATTTGTT...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000373204.6
CDS-3UTR TCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTATTGACACAGCTGCTTTaGAGGAGTACTTCTGTCATG +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLLTQLL*RSTSVM
Trigger: CATGACAGAAGTACTCCTTCAAAGCAGCTGTGTCAA...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTCAACTGGGCACCTaGGTTCAAATCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLSQLGT*VQISSP
Trigger: AGGAGAAGAGATTTGAACTCAGGTGCCCAGTTGACT...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGATGAGGAGAGCAACTaGGTACAATCCTCTCACATG +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSADEESN*VQSSHM
Trigger: CATGTGAGAGGATTGTACTCAGTTGCTCTCCTCATC...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATCTGACCAGGGCCTCATaGAGCATTCGCCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: ILSACRKDRVASCRFKCHLTRAS*SIRQLT
Trigger: TGTGAGCTGGCGAATGCTGCATGAGGCCCTGGTCAG...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCGCCACATCCAGGGCTTaGACAGACTCCAAGGGAACA +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSATSRA*TDSKGT
Trigger: TGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGC...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCCTCATGGATGCCAGGTaGCTCATGGCCACATCCAGG +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPLMDAR*LMATSR
Trigger: CCTGGATGTGGCCATGAGGCACCTGGCATCCATGAG...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAACACTGTTTTTGGGGTaGGAAGCAGGCGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKTLFLG*EAGDGP
Trigger: TGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAATTCACCTGCACACACTaGGTAGCCATTCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQFTCTH*VAIPKS
Trigger: ACTCTTGGGAATGGCTACGCAGTGTGTGCAGGTGAA...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCGGTGCCCTGGATGCCTaGGTGGCTGCACAGATAGAA +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPGALDA*VAAQIE
Trigger: TTCTATCTGTGCAGCCACGCAGGCATCCAGGGCACC...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGGCATAGTAGGCAGGTaGTGGGATAGAGACAGAGCG +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKGIVGR*WDRDRA
Trigger: CGCTCTGTCTCTATCCCAGCACCTGCCTACTATGCC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGTCCCGCCCATTGCTCTaGCCCGATATGTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRSRPLL*PDMWLP
Trigger: GGGGAGCCACATATCGGGGCAGAGCAATGGGCGGGA...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACACAATCAAAGAACAGTaGTCTCCTTTCCCACCTTTT +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHTIKEQ*SPFPPF
Trigger: AAAAGGTGGGAAAGGAGAGCACTGTTCTTTGATTGT...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTATTTCCCAAGGGAGTCTaGCAGATGATAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELFPKGV*QMIATG
Trigger: GCCTGTGGCTATCATCTGGCAGACTCCCTTGGGAAA...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAAGGAATGCCCAGAGGTaGCAGGACAAGCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKRNAQR*QDKPSL
Trigger: CAGTGAAGGCTTGTCCTGGCACCTCTGGGCATTCCT...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCCTGTGGCCTTTATCATaGTCGAGGTCTGGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPLWPLS*SRSGCR
Trigger: CCGACAACCAGACCTCGACCATGATAAAGGCCACAG...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTAGATCTAAGTTGTAGCTaGCATTCTTCATCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLDLSCS*HSSSGD
Trigger: GTCGCCTGATGAAGAATGCCAGCTACAACTTAGATC...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ATATTCGTTGTTGTAGCCTTATTCCACTCCCTCATTATCTTCCTCCTATGCCAGCGCCGTACTGCAAGATaGGCGCCGGCAGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: IFVVVALFHSLIIFLLCQRRTAR*APAALA
Trigger: GGCGAGTGCTGCCGGCGCCCATCTTGCAGTACGGCG...CTGGCATAGGAGGAAGATAATGAGGGAGTGGAATAAGGCTACAACAACGAATAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATCGCCGTACTGCAAGATaGGCGCCGGCAGCACTCGCC +
Preference number: 4 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDRRTAR*APAALA
Trigger: GGCGAGTGCTGCCGGCGCCCATCTTGCAGTACGGCG...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGCACCCTGATTGGGTGTaGCAATGGCCCGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKHPDWV*QWPGSG
Trigger: GCCGGAACCGGGCCATTGCCACACCCAATCAGGGTG...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATATCTCGACACTGTTTTTaGGGTGCGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMISRHCF*GAKQAM
Trigger: CATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGA...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTCTCGACACTGTTTTTaGGGTGCGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQSRHCF*GAKQAM
Trigger: CATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGA...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGCACCGGCGTCTTCCCTaGCAGGATGACAATAATGAG +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWHRRLP*QDDNNE
Trigger: CTCATTATTGTCATCCTGCCAGGGAAGACGCCGGTG...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTACACCGGCGTCTTCCCTaGCAGGATGACAATAATGAG +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELHRRLP*QDDNNE
Trigger: CTCATTATTGTCATCCTGCCAGGGAAGACGCCGGTG...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGAATGATCTCTTGCCGTaGTCGCTGTACCCGCACAGT +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWNDLLP*SLYPHS
Trigger: ACTGTGCGGGTACAGCGACCACGGCAAGAGATCATT...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAAGTATCTGGGGTAGCTaGCCTTCAGGCACCCCATCT +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVSIWGS*PSGTPS
Trigger: AGATGGGGTGCCTGAAGGCCAGCTACCCCAGATACT...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCTCCTTGTCCACCAGGTaGTATCGTGCCCGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPSLSTR*YRARKA
Trigger: GGCTTTCCGGGCACGATACCACCTGGTGGACAAGGA...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCGCTTTGGCCAGGGCCTaGGGGTCCCGCCCATTGCTC +
Preference number: 4 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFALARA*GSRPLL
Trigger: GAGCAATGGGCGGGACCCCCAGGCCCTGGCCAAAGC...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTTGCTTCCTCTGGATTTaGGTGGCACAGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFCFLWI*VAQLLG
Trigger: CCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGCA...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTCCTCCTTGCTTCCTCTaGATTTGGGTGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSPPCFL*IWVAQL
Trigger: GAGCTGTGCCACCCAAATCCAGAGGAAGCAAGGAGG...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCACCTCCTTGCTTCCTCTaGATTTGGGTGGCACAGCTC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAPPCFL*IWVAQL
Trigger: GAGCTGTGCCACCCAAATCCAGAGGAAGCAAGGAGG...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAGAGATTTCTGGCTGGTaGTCTGTCTTGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVEISGW*SVLLAL
Trigger: CAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTC...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTACACCTGTGTGTATGGTaGGCACCAGTGCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVHLCVW*APVLPL
Trigger: AAGGGGCAGCACTGGTGCCCACCATACACACAGGTG...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAAGTATTACTAGGGGCTaGATGTCTGTCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQSITRG*MSVREE
Trigger: CTCCTCCCTGACAGACATCCAGCCCCTAGTAATACT...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTAGCTGGCTTTCTGGCTaGAGGTTTGTTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSSWLSG*RFVGSG
Trigger: CCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR CCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCCTGGACCCCATCTTaGGGCGATAACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKAWTPS*GDNHPL
Trigger: GAGGGGGTGGTTATCGCCCCAAGATGGGGTCCAGGC...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTATGCACAGAGGAAGGATaGAGCCTGGACCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVCTEEG*SLDPIL
Trigger: CAAGATGGGGTCCAGGCTCCATCCTTCCTCTGTGCA...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
CDS-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAATGGGGAACAGGTTCTTaGTCTTCTGCAGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQWGTGS*SSAVKE
Trigger: CTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCA...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACGTACATTACAGCTGCTaGGATAATTTCACAATGGAC +
Preference number: 4 (lower is better)
Translates to: REGTGYPPAGGRKTGSCHVHYSC*DNFTMD
Trigger: GTCCATTGTGAAATTATCCCAGCAGCTGTAATGTAC...GTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAAAGAAGCATGGGGCTaGCTGGCTCTTTCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALKEAWG*LALSQG
Trigger: CCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTT...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTAAACGCACGGCGTAAATaGGCCCCGCCTGTGCTACAG +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVNARRK*APPVLQ
Trigger: CTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTT...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CAA 72 bp CTCACGCACCATGTAGGACAAGTCTTCAATGATCTCTaGCCGTGGTCGCTGTACCCGCACAGTAGCACAGTA +
Preference number: 4 (lower is better)
Translates to: LTHHVGQVFNDL*PWSLYPHSSTV
Trigger: TACTGTGCTACTGTGCGGGTACAGCGACCACGGCAAGAGATCATTGAAGACTTGTCCTACATGGTGCGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTAATTGGCCAGGAGCTTaGTTGGTTTCCCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSNWPGA*LVSPQC
Trigger: GCACTGTGGGGAAACCAATCAAGCTCCTGGCCAATT...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR TCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCGACACTTATCCGGCTTaGTGTCCACCTCGTAGTGGT +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSDTYPA*CPPRSG
Trigger: ACCACTACGAGGTGGACATCAAGCCGGATAAGTGTC...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGCCACCACTTCCCGGTTaGCTCTACGGGGACACTTAT +
Preference number: 4 (lower is better)
Translates to: YQILSACRKDRVASCRFKPPLPG*LYGDTY
Trigger: ATAAGTGTCCCCGTAGAGTCAACCGGGAAGTGGTGG...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTACAATGGGCAGTGCTGTaGCAGTGTAAATGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLQWAVL*QCKCSS
Trigger: AGAAGAACATTTACACTGTCACAGCACTGCCCATTG...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ATATTCGTTGTTGTAGCCTTATTCCACTCCCTCATTATCTTCCTCCTATGCCAGGTAGCCCTCAGGCGGTaGGAAGAAGGAGCGGCCCAC +
Preference number: 4 (lower is better)
Translates to: IFVVVALFHSLIIFLLCQVALRR*EEGAAH
Trigger: GTGGGCCGCTCCTTCTTCTCACCGCCTGAGGGCTAC...CTGGCATAGGAGGAAGATAATGAGGGAGTGGAATAAGGCTACAACAACGAATAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAAGGGCGCACAGACTGGTaGAAGCCGAACCAGACCTCG +
Preference number: 4 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKGRTDW*KPNQTS
Trigger: CGAGGTCTGGTTCGGCTTTCACCAGTCTGTGCGCCC...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTCTGAGACATCAATGTTaGGCATCATCTTCCACATGG +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLALRHQC*ASSSTW
Trigger: CCATGTGGAAGATGATGCTCAACATTGATGTCTCAG...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCCGCGCTGAGAGTCCGTaGGGGGCTTGGGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFRAESP*GAWAAH
Trigger: ATGAGCAGCCCAAGCCCCTCACGGACTCTCAGCGCG...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GCAACAGTAGCCCCAGGCTTATCCCTGGAGGCCAGTGTAGCACCTCGATCCCTAGGTTATATTTCTGCTTaGAATACTGTGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: ATVAPGLSLEASVAPRSLGYISA*NTVPLC
Trigger: GCACAGTGGCACAGTATTTCAAGCAGAAATATAACC...TAGGGATCGAGGTGCTACACTGGCCTCCAGGGATAAGCCTGGGGCTACTGTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGGACAGAGTCTGAGGTaGGGTCTTGACCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSGQSLR*GLDHVL
Trigger: AAGAACGTGGTCAAGACCTCACCTCAGACTCTGTCC...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGAATATCACTGGCTGTTaGAAAACGGCAGAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWNITGC*KTAERW
Trigger: CCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATT...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCAGGACAAGTCTTCAATaGTCTCTTGCCGTGGTCGCT +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPRTSLQ*SLAVVA
Trigger: AGCGACCACGGCAAGAGATCATTGAAGACTTGTCCT...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAACTCAAATGGGTGGGTaGTGTTGGTGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALTQMGG*CWCPLW
Trigger: CCACAGTGGACACCAACATCACCCACCCATTTGAGT...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAACTCAAATGGGTGGGTaGTGTTGGTGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKATQMGG*CWCPLW
Trigger: CCACAGTGGACACCAACATCACCCACCCATTTGAGT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTAGCAGGGCTACAGAGTTaGCCTTACCAAGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLAGLQS*PYQAVK
Trigger: CTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGC...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTATGCCAGAAACCCTCCTaGCTTCACACAAGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLCQKPS*LHTSWA
Trigger: TGCCCAACTTGTGTGAAGTCAGGAGGGTTTCTGGCA...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTACTTGGCTGCCCATCTTaGGTGCTGGCCTTATTCACA +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLLGCPS*VLALFT
Trigger: TGTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAG...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTATATCCTCAACCCCTCTaGTTCTGGAACCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLYPQPL*FWNRFP
Trigger: AGGGAACCGGTTCCAGAATCAGAGGGGTTGAGGATA...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCACATCCCATATACCCGTaGGGAGGTCAGGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPHPIYP*GGQAAR
Trigger: CCGGGCCGCCTGACCTCCGCACGGGTATATGGGATG...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCTCCCCACAGTGCCAATaGCAGGCCGGCGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFSPQCQ*QAGEVP
Trigger: AGGCACCTCGCCGGCCTGGCATTGGCACTGTGGGGA...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGTGAGGGGCTTGGGCTaGTCATCTATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSVRGLG*SSMFLM
Trigger: CATCAGGAACATAGATGAGCAGCCCAAGCCCCTCAC...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCGTGAGGGGCTTGGGCTaGTCATCTATGTTCCTGATG +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSVRGLG*SSMFLM
Trigger: CATCAGGAACATAGATGAGCAGCCCAAGCCCCTCAC...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGAATACTGTGCCACTGTaGACTCCACAGTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWNTVPL*TPQSVH
Trigger: GTGGACAGACTGTGGAGTGCACAGTGGCACAGTATT...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTTCACCTGCACACACTaGGTAGCCATTCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQFTCTH*VAIPKS
Trigger: ACTCTTGGGAATGGCTACGCAGTGTGTGCAGGTGAA...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCGGATGCCTGCGTGGCTaGACAGATAGAAGTCAAACT +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPGCLRG*TDRSQT
Trigger: AGTTTGACTTCTATCTGTGCAGCCACGCAGGCATCC...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCGGTGCCCTGGATGCCTaGGTGGCTGCACAGATAGAA +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSGALDA*VAAQIE
Trigger: TTCTATCTGTGCAGCCACGCAGGCATCCAGGGCACC...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTGGTGCCCTGGATGCCTaGGTGGCTGCACAGATAGAA +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGGALDA*VAAQIE
Trigger: TTCTATCTGTGCAGCCACGCAGGCATCCAGGGCACC...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp TCAGCTTCTTCCAGAATAGACATTAGACATGGTGACAGTGATAAACCTTTGGGGGGGGGTCCCGCCCATTaGTCTGCCCCGATATGTGGC +
Preference number: 4 (lower is better)
Translates to: SASSRIDIRHGDSDKPLGGGPAH*SAPICG
Trigger: GCCACATATCGGGGCAGAGCAATGGGCGGGACCCCC...CCCCAAAGGTTTATCACTGTCACCATGTCTAATGTCTATTCTGGAAGAAGCTGA
52% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCTGGTGGTCTGTCTTaGTGGCCCTGTTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKAGGLS*WPCSPL
Trigger: GAGTGGGGAACAGGGCCAGCAAGACAGACCACCAGC...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp TCAACTGGTCAAAATCTGCTCCATGTCCAATCTGCTCTTCAAGTTCAACCAACCGGTGGGCACCAGTGCTaGCCCTTTTGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: STGQNLLHVQSALQVQPTGGHQC*PFWSSG
Trigger: CCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACC...GGTTGGTTGAACTTGAAGAGCAGATTGGACATGGAGCAGATTTTGACCAGTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGGGTGGGCACCAGTGCTaGCCCTTTTGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLGGHQC*PFWSSG
Trigger: CCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACC...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTATATGGTGGGCACCAGTaGTGCCCCTTTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVYGGHQ*CPFWSS
Trigger: ACTGGACCAAAAGGGGCAGCACTGGTGCCCACCATA...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTGGGGAAGGAAAAAGATaGACTTGCAAGAAAGAGTGC +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAGEGKR*TCKKEC
Trigger: GCACTCTTTCTTGCAAGTGCATCTTTTTCCTTCCCC...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTGCCACCCACCCACATaGCCTAGTGGGAAACCAGGA +
Preference number: 4 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWCHPPT*PSGKPG
Trigger: TCCTGGTTTCCCACTAGGGCATGTGGGTGGGTGGCA...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATGCTGGGAGTAGAGGCTaGCACCTGCTCCCTATGGAC +
Preference number: 4 (lower is better)
Translates to: TILSHGPRLESTGHLSSNAGSRG*HLLPMD
Trigger: GTCCATAGGGAGCAGGTGGCAGCCTCTACTCCCAGC...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGCTCATTTCTTGTCATTaGCCAAAGCTGATTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRLISCH*PKLILL
Trigger: CAAGAGAATCAGCTTTGGGCAATGACAAGAAATGAG...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTCCAGCTAATAGTCAGTaGACCCTTGGCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSPANSQ*TLGCPS
Trigger: AGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGG...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
CDS-3UTR GCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCACCACCAAATCCTAATTaGCATGAGATTCTGGGGTCT +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAPPNPN*HEILGS
Trigger: AGACCCCAGAATCTCATGGCAATTAGGATTTGGTGG...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCATTCTGTCATGCTGTGTaGCTTCTAAGCCGGCCTAGG +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAFCHAV*LLSRPR
Trigger: CCTAGGCCGGCTTAGAAGGCACACAGCATGACAGAA...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATACACTTCCCTCCCTGCTaGCGCTATTATTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMIHFPPC*RYYSTL
Trigger: CAGAGTAGAATAATAGCGGCAGCAGGGAGGGAAGTG...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATAGGCTCCCCGAGTTCTaGGTGGGCCTCACGCACTCC +
Preference number: 4 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDRLPEF*VGLTHS
Trigger: GGAGTGCGTGAGGCCCACGCAGAACTCGGGGAGCCT...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373206.5
CDS-3UTR CCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGAAGGGAACAGGGATCTaGCCGCTGACCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKKGTGI*PLTRAS
Trigger: TGAGGCCCTGGTCAGCGGCCAGATCCCTGTTCCCTT...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ACAATCCTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATAAGGGAACAGGGATCTaGCCGCTGACCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: TILSHGPRLESTGHLSSNKGTGI*PLTRAS
Trigger: TGAGGCCCTGGTCAGCGGCCAGATCCCTGTTCCCTT...ATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAGGATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCCAGGGGTGTACCTCATaGATGCCAGGTGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSQGCTS*MPGASW
Trigger: CCATGAGGCACCTGGCATCCATGAGGTACACCCCTG...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTCAGGGGTGTACCTCATaGATGCCAGGTGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSQGCTS*MPGASW
Trigger: CCATGAGGCACCTGGCATCCATGAGGTACACCCCTG...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTACTGTGGCCTTTATCATaGTCGAGGTCTGGTTGTCGG +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALLWPLS*SRSGCR
Trigger: CCGACAACCAGACCTCGACCATGATAAAGGCCACAG...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATGATTGGGTGTGGCAATaGCCCGGTTCCGGCCGCCGT +
Preference number: 4 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDDWVWQ*PGSGRR
Trigger: ACGGCGGCCGGAACCGGGCCATTGCCACACCCAATC...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAACACCCTGATTGGGTGTaGCAATGGCCCGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKHPDWV*QWPGSG
Trigger: GCCGGAACCGGGCCATTGCCACACCCAATCAGGGTG...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCCCAGACACCCTGATTaGGTGTGGCAATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRPRHPD*VWQWPG
Trigger: ACCGGGCCATTGCCACACCCAATCAGGGTGTCTGGG...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGCCCAGACACCCTGATTaGGTGTGGCAATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKPRHPD*VWQWPG
Trigger: ACCGGGCCATTGCCACACCCAATCAGGGTGTCTGGG...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCATCTCGACACTGTTTTTaGGGTGCGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKASRHCF*GAKQAM
Trigger: CATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGA...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAAAAACGGCAGAGCGCTaGTGTGGGACTAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVKTAER*CGTRML
Trigger: CAACATCCTAGTCCCACACCAGCGCTCTGCCGTTTT...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAAATGATCTCTTGCCGTaGTCGCTGTACCCGCACAGT +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVNDLLP*SLYPHS
Trigger: ACTGTGCGGGTACAGCGACCACGGCAAGAGATCATT...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAGAAGTCAAACTCAAATaGGTGGGTGATGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLEVKLK*VGDVGV
Trigger: GACACCAACATCACCCACCCATTTGAGTTTGACTTC...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGAAGTCAAACTCAAATaGGTGGGTGATGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAEVKLK*VGDVGV
Trigger: GACACCAACATCACCCACCCATTTGAGTTTGACTTC...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTCTCTGCCCCGATATGTaGCTCCCCTCTCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGLCPDM*LPSPLS
Trigger: TGACAGTGGAGAGGGGAGCCACATATCGGGGCAGAG...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTTCCTCTGGATTTGGGTaGCACAGCTCCTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSSSGFG*HSSWGL
Trigger: CAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAGGA...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 4 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCATCAGAGATTTCTGGCTaGTGGTCTGTCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKASEISG*WSVLLA
Trigger: GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGA...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTACACCTGTGTGTATGGTaGGCACCAGTGCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVHLCVW*APVLPL
Trigger: AAGGGGCAGCACTGGTGCCCACCATACACACAGGTG...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSRHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGTTACAGGGAAGGCACTaGTTACCCACCAGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRLQGRH*LPTSGR
Trigger: CCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAA...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGTTACAGGGAAGGCACTaGTTACCCACCAGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKLQGRH*LPTSGR
Trigger: CCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAA...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGGCTGGAGGTTTGTTaGGTCTGGGGTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQWLEVC*VWGISS
Trigger: GGAAGAAATACCCCAGACCCAACAAACCTCCAGCCA...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR CCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAAGCCTGGACCCCATCTTaGGGCGATAACCACCCCCTC +
Preference number: 4 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKAWTPS*GDNHPL
Trigger: GAGGGGGTGGTTATCGCCCCAAGATGGGGTCCAGGC...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATAAAGAAGCATGGGGCTaGCTGGCTCTTTCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: ILSACRKDRVASCRFKCHKEAWG*LALSQG
Trigger: CCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTT...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCGGGCCCAGTGGCTTGTaGCTTATGCCTGTAATTCCA +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSGPSGL*LMPVIP
Trigger: TGGAATTACAGGCATAAGCCACAAGCCACTGGGCCC...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAACGATCACCAAAGATCTaGGGCTTGAAATGCTGGACC +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKRSPKI*GLKCWT
Trigger: GGTCCAGCATTTCAAGCCTCAGATCTTTGGTGATCG...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTACGATCACCAAAGATCTaGGGCTTGAAATGCTGGACC +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALRSPKI*GLKCWT
Trigger: GGTCCAGCATTTCAAGCCTCAGATCTTTGGTGATCG...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAACAATGGGCAGTGCTGTaGCAGTGTAAATGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQQWAVL*QCKCSS
Trigger: AGAAGAACATTTACACTGTCACAGCACTGCCCATTG...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TTAGACATGGTGACAGTGATAAACCTTTGGGGTGGGCTAGTCTTTTTCAACATTCAGGGATCTGGCCGCTaGCCAGGGCCTCATGCAGCA +
Preference number: 4 (lower is better)
Translates to: LDMVTVINLWGGLVFFNIQGSGR*PGPHAA
Trigger: TGCTGCATGAGGCCCTGGTCAGCGGCCAGATCCCTG...AATGTTGAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGTCACCATGTCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGCTCATCTATGTTCCTaGTGTCCAGCACCTCACACA +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAAHLCS*CPAPHT
Trigger: TGTGTGAGGTGCTGGACATCAGGAACATAGATGAGC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAACGCGCTGAGAGTCCGTaGGGGGCTTGGGCTGCTCAT +
Preference number: 4 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQRAESP*GAWAAH
Trigger: ATGAGCAGCCCAAGCCCCTCACGGACTCTCAGCGCG...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGTGTAAGGGGAATGTCTaGTGGCTAGCAGGGCGACGG +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKCKGNV*WLAGRR
Trigger: CCGTCGCCCTGCTAGCCATCAGACATTCCCCTTACA...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TGCCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGGAATAAATGTTGTAAGGGGAATGTCTaGTGGCTAGCAGGGCGACGG +
Preference number: 4 (lower is better)
Translates to: CLLSRPRHFSAYHQRNKCCKGNV*WLAGRR
Trigger: CCGTCGCCCTGCTAGCCATCAGACATTCCCCTTACA...ACATTTATTCCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAGGTTATATTTCTGCTTaGAATACTGTGCCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLGYISA*NTVPLC
Trigger: GCACAGTGGCACAGTATTTCAAGCAGAAATATAACC...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAGCAGATGGGGATACTTaGGCTGAAGGTTATATTTCT +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLADGDT*AEGYIS
Trigger: AGAAATATAACCTTCAGCTCAAGTATCCCCATCTGC...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATGTCATCCTTCACTTTaGTCCCAAATTCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLCHPSL*SQIPGC
Trigger: ACATCCAGGAATTTGGGATCAAAGTGAAGGATGACA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTGGACAGAGTCTGAGGTaGGGTCTTGACCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFGQSLR*GLDHVL
Trigger: AAGAACGTGGTCAAGACCTCACCTCAGACTCTGTCC...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCAGGTTGGACAGAGTCTaGGGTGAGGTCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSRLDRV*GEVLTT
Trigger: CGTGGTCAAGACCTCACCTCAGACTCTGTCCAACCT...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTAAGGTTGGACAGAGTCTaGGGTGAGGTCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVRLDRV*GEVLTT
Trigger: CGTGGTCAAGACCTCACCTCAGACTCTGTCCAACCT...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCACTTGTAGAATTGGATaGGGAGCTCACGCACCATGT +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPTCRIG*GAHAPC
Trigger: ACATGGTGCGTGAGCTCCTCATCCAATTCTACAAGT...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGAGTCCTTTTCCAGTTTaGTGCAGGCATCACGAATGG +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQSPFPV*CRHHEW
Trigger: CCATTCGTGATGCCTGCATCAAACTGGAAAAGGACT...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR TCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCAACTCAAATGGGTGGGTaGTGTTGGTGTCCACTGTGG +
Preference number: 4 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPTQMGG*CWCPLW
Trigger: CCACAGTGGACACCAACATCACCCACCCATTTGAGT...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTACCAAGCTGTCAAGCATaGGTCTTTAGCACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELPSCQA*VFSTVS
Trigger: ACTCACAGTGCTAAAGACTCATGCTTGACAGCTTGG...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGCCAAGCTGTCAAGCATaGGTCTTTAGCACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWPSCQA*VFSTVS
Trigger: ACTCACAGTGCTAAAGACTCATGCTTGACAGCTTGG...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAGAGGAAATTCCACACTaGAGTTGCAACTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVEEIPH*SCNSPS
Trigger: GGATGGGGAGTTGCAACTTCAGTGTGGAATTTCCTC...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
CDS-3UTR TCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTAGAAGTAGACTGTATATaGAGGCAATGGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELEVDCI*RQWTGQ
Trigger: CTGCCCTGTCCATTGCCTTCATATACAGTCTACTTC...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGCAAATGCTGGTGAATaGCTGGACCCTCCAGGAATA +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSANAGE*LDPPGI
Trigger: TATTCCTGGAGGGTCCAGTCATTCACCAGCATTTGC...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
CDS-3UTR TCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTATTTGCAAATGCTGGTaGATGACTGGACCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSICKCW*MTGPSR
Trigger: CCTGGAGGGTCCAGTCATTCACCAGCATTTGCAAAT...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
CDS-3UTR TCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCATTTGCAAATGCTGGTaGATGACTGGACCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSICKCW*MTGPSR
Trigger: CCTGGAGGGTCCAGTCATTCACCAGCATTTGCAAAT...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCCCCCAAGCACTTCCTTaGAGCTTGGGTAAGAAGCAC +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPPQALP*SLGKKH
Trigger: GTGCTTCTTACCCAAGCTTCAAGGAAGTGCTTGGGG...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
51% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTACCCAACTAAGAGGATaGGGCTGGGGGTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRITQLRG*GWGSPK
Trigger: CTTGGGGGACCCCCAGCCTCATCCTCTTAGTTGGGT...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGACCCAACTAAGAGGATaGGGCTGGGGGTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLTQLRG*GWGSPK
Trigger: CTTGGGGGACCCCCAGCCTCATCCTCTTAGTTGGGT...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAATGATTTTTCTACCCTaGTGGGGAAGAAACGTCCAA +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLMIFLP*WGRNVQ
Trigger: TTGGACGTTTCTTCCCCATCAGGGTAGAAAAATCAT...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCATTGGCTAGTTTGAGATaGTTTTTCTACCCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSALASLR*FFYPDG
Trigger: CCCATCAGGGTAGAAAAATCATCTCAAACTAGCCAA...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCGTGCGCTCTGAAAGTTaGACCTCCTCAGGAGCCATC +
Preference number: 4 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFVRSES*TSSGAI
Trigger: GATGGCTCCTGAGGAGGTTCAACTTTCAGAGCGCAC...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATTTGGATCAGTCACTTaGTCTCTCTGGGCTTCAATT +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLFGSVT*SLWASI
Trigger: AATTGAAGCCCAGAGAGATCAAGTGACTGATCCAAA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp TCTCAGCAGCTCCGAGACTTGTCATGTTTGAAAGTGCAAATGTCAATGGATTTTCATCCCATATACCCGTaGGGAGGTCAGGCGGCCCGG +
Preference number: 4 (lower is better)
Translates to: SQQLRDLSCLKVQMSMDFHPIYP*GGQAAR
Trigger: CCGGGCCGCCTGACCTCCGCACGGGTATATGGGATG...AAAATCCATTGACATTTGCACTTTCAAACATGACAAGTCTCGGAGCTGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGTTGGTTTCCCCACAGTaGCAATGCCAGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLLVSPQ*QCQAGE
Trigger: CTCGCCGGCCTGGCATTGGCACTGTGGGGAAACCAA...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GTTTGTGCTACGTTTTGTGAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCTTGGTTTCCCCACAGTaGCAATGCCAGGCCGGCGAG +
Preference number: 4 (lower is better)
Translates to: VCATFCELLNNVANQNRTLVSPQ*QCQAGE
Trigger: CTCGCCGGCCTGGCATTGGCACTGTGGGGAAACCAA...GGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGTAGCACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCGCCACATCCAGGGCTTaGACAGACTCCAAGGGAACA +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSATSRA*TDSKGT
Trigger: TGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGC...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGCTCAATCACTGGCTGTaGCTTATAAAAGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQLNHWL*LIKGSG
Trigger: GCCACTGCCTTTTATAAGGCACAGCCAGTGATTGAG...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTTTCACCTGCACACACTaGGTAGCCATTCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSFTCTH*VAIPKS
Trigger: ACTCTTGGGAATGGCTACGCAGTGTGTGCAGGTGAA...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTATTCACCTGCACACACTaGGTAGCCATTCCCAAGAGT +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALFTCTH*VAIPKS
Trigger: ACTCTTGGGAATGGCTACGCAGTGTGTGCAGGTGAA...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAGGATGCCTGCGTGGCTaGACAGATAGAAGTCAAACT +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALGCLRG*TDRSQT
Trigger: AGTTTGACTTCTATCTGTGCAGCCACGCAGGCATCC...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATAGATCTGGAGCTCATCTaGTGTGAAACGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMIDLELI*CETVVI
Trigger: GATGACAACCGTTTCACAGCAGATGAGCTCCAGATC...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTGGCATAGTAGGCAGGTaGTGGGATAGAGACAGAGCG +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGGIVGR*WDRDRA
Trigger: CGCTCTGTCTCTATCCCAGCACCTGCCTACTATGCC...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTCCCGCCCATTGCTCTaGCCCGATATGTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDSRPLL*PDMWLP
Trigger: GGGGAGCCACATATCGGGGCAGAGCAATGGGCGGGA...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATGGTGGGCACCAGTGCTaGCCCTTTTGGTCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDGGHQC*PFWSSG
Trigger: CCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACC...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATATGGTGGGCACCAGTaGTGCCCCTTTTGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVYGGHQ*CPFWSS
Trigger: ACTGGACCAAAAGGGGCAGCACTGGTGCCCACCATA...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTTCCAAGTGGAGAACATaGAGAGCCCACTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSSKWRT*RAHCPR
Trigger: CCTGGGACAGTGGGCTCTGCATGTTCTCCACTTGGA...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGGTAGAGGCTGCCACCTaGTCCCTATGGACATTTGCA +
Preference number: 4 (lower is better)
Translates to: YQILSACRKDRVASCRFKVEAAT*SLWTFA
Trigger: TGCAAATGTCCATAGGGAGCAGGTGGCAGCCTCTAC...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTGGATCATTGCAGCCATaGAGAGATTTCATCATCACA +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLAGSLQP*RDFIIT
Trigger: TGTGATGATGAAATCTCTGCATGGCTGCAATGATCC...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCACCAGCGGGCGGAAGGACTGTACATTACAGCTaGTGGGATAATTTCACAATG +
Preference number: 4 (lower is better)
Translates to: LQHYRYREGTGYPPAGGRTVHYS*WDNFTM
Trigger: CATTGTGAAATTATCCCAGCAGCTGTAATGTACAGT...CCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTCACACTTCCCTCCCTaGTGCCGCTATTATTCTACT +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQSHFPP*CRYYST
Trigger: AGTAGAATAATAGCGGCAGCAGGGAGGGAAGTGTGA...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373204.6
CDS-3UTR GCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGGACAGAGTGGCCAGCTaGCGCTTTAAGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: YQILSACRKDRVASCRFKDRVAS*RFKCHV
Trigger: GACATGACACTTAAAGCGGCAGCTGGCCACTCTGTC...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACGACAGAGTGGCCAGCTaGCGCTTTAAGTGTCATGTC +
Preference number: 4 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHDRVAS*RFKCHV
Trigger: GACATGACACTTAAAGCGGCAGCTGGCCACTCTGTC...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACGGCCAGGAGCTTGATTaGTTTCCCCACAGTGCCAAT +
Preference number: 4 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHGQELD*FPHSAN
Trigger: ATTGGCACTGTGGGGAAACCAATCAAGCTCCTGGCC...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTACATGAACTCAATCACTaGCTGTGCCTTATAAAAGGC +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLHELNH*LCLIKG
Trigger: GCCTTTTATAAGGCACAGCCAGTGATTGAGTTCATG...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTCCCAGACACCCTGATTaGGTGTGGCAATGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRIPRHPD*VWQWPG
Trigger: ACCGGGCCATTGCCACACCCAATCAGGGTGTCTGGG...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTATCTCGACACTGTTTTTaGGGTGCGAAGCAGGCGATG +
Preference number: 4 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVSRHCF*GAKQAM
Trigger: CATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGA...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGGAAATCTTCCGCAGCTaGTCTGTGAAGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQEIFRS*SVKFLS
Trigger: GCTCAAGAACTTCACAGACCAGCTGCGGAAGATTTC...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp ATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGTGTCATAAAACGGCAGAGCGCTaGTGTGGGACTAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: ILSACRKDRVASCRFKCHKTAER*CGTRML
Trigger: CAACATCCTAGTCCCACACCAGCGCTCTGCCGTTTT...ATGACACTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp GCTTTAGAAGGACACAGAAAAATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAATGGGATGGTCGGCTaGTGCCCTGGATGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: ALEGHRKICLSFARHGSVNGMVG*CPGCLR
Trigger: ACGCAGGCATCCAGGGCACCAGCCGACCATCCCATT...GACAGAACCGTGTCTGGCAAAAGAGAGACAGATTTTTCTGTGTCCTTCTAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTAACATAGTAATGGGATaGTCGGCTGGTGCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSNIVMG*SAGALD
Trigger: ATCCAGGGCACCAGCCGACCATCCCATTACTATGTT...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTAAACATAGTAATGGGATaGTCGGCTGGTGCCCTGGAT +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLNIVMG*SAGALD
Trigger: ATCCAGGGCACCAGCCGACCATCCCATTACTATGTT...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGCTCTGCCCCGATATGTaGCTCCCCTCTCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKLCPDM*LPSPLS
Trigger: TGACAGTGGAGAGGGGAGCCACATATCGGGGCAGAG...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGATTGTTTTGCATAGCAAATCCGGGTCATACAAGGGCAGCTAAGGGGAGGAAACTCTGCCCCGATATGTaGCTCCCCTCTCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: RLFCIANPGHTRAAKGRKLCPDM*LPSPLS
Trigger: TGACAGTGGAGAGGGGAGCCACATATCGGGGCAGAG...TTTCCTCCCCTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGACAGCTCCTGGGGCTTaGAAAGCTTTCTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQTAPGA*KAFFYP
Trigger: TGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGT...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 4 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAATTACAGGGAAGGCACTaGTTACCCACCAGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKLQGRH*LPTSGR
Trigger: CCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAA...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCTGGGGAACAGGTTCTTaGTCTTCTGCAGTCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSWGTGS*SSAVKE
Trigger: CTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCA...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCCTGACGATTTCTCACTaGGGTATCCGCCAGGATCCT +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPLTISH*GIRQDP
Trigger: AGGATCCTGGCGGATACCCCAGTGAGAAATCGTCAG...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTACCTCCCTTTGGAAAATaGGGACAAAGGACCAAAGGC +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALPPFGK*GQRTKG
Trigger: GCCTTTGGTCCTTTGTCCCCATTTTCCAAAGGGAGG...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CAA 72 bp TGTGAAGTTCTTGAGCACCTCTTCTCGACACTGTTTTaGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGAT +
Preference number: 4 (lower is better)
Translates to: CEVLEHLFSTLF*GCEAGDGPDFD
Trigger: ATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGTCGAGAAGAGGTGCTCAAGAACTTCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTAATTGGCCAGGAGCTTaGTTGGTTTCCCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSNWPGA*LVSPQC
Trigger: GCACTGTGGGGAAACCAATCAAGCTCCTGGCCAATT...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ATCTGCTCCCAGGAATATCACTGGCTGTTGAAAAACGGCAGAGCGCTGGTGTGGCAATGGGCAGTGCTGTaGCAGTGTAAATGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ICSQEYHWLLKNGRALVWQWAVL*QCKCSS
Trigger: AGAAGAACATTTACACTGTCACAGCACTGCCCATTG...CCACACCAGCGCTCTGCCGTTTTTCAACAGCCAGTGATATTCCTGGGAGCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp CAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTTCTGTCCACAGTGGGTaGCTTCCACCTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QFLQMQNSWLSGWRFVGSSVHSG*LPPSGP
Trigger: AGGGCCTGAAGGTGGAAGTCACCCACTGTGGACAGA...AGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTTGTAAGGGGAATGTCTaGTGGCTAGCAGGGCGACGG +
Preference number: 4 (lower is better)
Translates to: QFLQMQNSWLSGWRFVGSCKGNV*WLAGRR
Trigger: CCGTCGCCCTGCTAGCCATCAGACATTCCCCTTACA...AGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTCTTCATCAGGCGACTaGTCTCCTCCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGSSSGD*SPPVCL
Trigger: CAGACAGACAGGAGGAGATCAGTCGCCTGATGAAGA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTTCTTCATCAGGCGACTaGTCTCCTCCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSSSSGD*SPPVCL
Trigger: CAGACAGACAGGAGGAGATCAGTCGCCTGATGAAGA...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCACGATGGCCCAGACTTTaGTCTCAATCCCATTGTAGA +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKARWPRL*SQSHCR
Trigger: TCTACAATGGGATTGAGATCAAAGTCTGGGCCATCG...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACAATGAGCTGCAGCCCTaGGTAGGTGTTCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHNELQP*VGVLEM
Trigger: CATCTCAAGAACACCTACTCAGGGCTGCAGCTCATT...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTAATGAGCTGCAGCCCTaGGTAGGTGTTCTTGAGATG +
Preference number: 4 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFNELQP*VGVLEM
Trigger: CATCTCAAGAACACCTACTCAGGGCTGCAGCTCATT...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR TCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATCTGAGGTGAGGTCTTaGCCACGTTCTTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVSEVRS*PRSSPA
Trigger: TGCAGGTGAAGAACGTGGTCAAGACCTCACCTCAGA...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTAAGTCCTTTTCCAGTTTaGTGCAGGCATCACGAATGG +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLSPFPV*CRHHEW
Trigger: CCATTCGTGATGCCTGCATCAAACTGGAAAAGGACT...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTACTTTCTTCTATCCAGTaGGGTAACAGCGTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVLSSIQ*GNSVLP
Trigger: AGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAG...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCACCAAGCTGTCAAGCATaGGTCTTTAGCACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAPSCQA*VFSTVS
Trigger: ACTCACAGTGCTAAAGACTCATGCTTGACAGCTTGG...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTCCAAGCTGTCAAGCATaGGTCTTTAGCACTGTGAGT +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSPSCQA*VFSTVS
Trigger: ACTCACAGTGCTAAAGACTCATGCTTGACAGCTTGG...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR TCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCGCAGGGCTACAGAGTTaGCCTTACCAAGCTGTCAAG +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSAGLQS*PYQAVK
Trigger: CTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGC...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGAGACTTGTCATGTTTaGAAGTGCAAATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSAETCHV*KCKCQW
Trigger: CCATTGACATTTGCACTTTCAAACATGACAAGTCTC...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAGAGACTTGTCATGTTTaGAAGTGCAAATGTCAATGG +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLETCHV*KCKCQW
Trigger: CCATTGACATTTGCACTTTCAAACATGACAAGTCTC...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTAGTACACAGTTCATTCTaGTGGCTCAATGTTTCTGGG +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELVHSSF*WLNVSG
Trigger: CCCAGAAACATTGAGCCATCAGAATGAACTGTGTAC...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCCACTGCAATCTAGGATaGGCCAAAGGGTCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSHCNLG*AKGSED
Trigger: GTCCTCTGACCCTTTGGCTCATCCTAGATTGCAGTG...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCGAGGAAATTCCACACTaGAGTTGCAACTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPEEIPH*SCNSPS
Trigger: GGATGGGGAGTTGCAACTTCAGTGTGGAATTTCCTC...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCGAAGTAGACTGTATATaGAGGCAATGGACAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSEVDCI*RQWTGQ
Trigger: CTGCCCTGTCCATTGCCTTCATATACAGTCTACTTC...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAATTTCAAGCCCCAGCTaGAAACCAACTGGAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKAISSPS*KPTGES
Trigger: ACTCTCTCCAGTTGGTTTTCAGCTGGGGCTTGAAAT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp ATATTCGTTGTTGTAGCCTTATTCCACTCCCTCATTATCTTCCTCCTATGCCAGACCCAACTAAGAGGATaGGGCTGGGGGTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: IFVVVALFHSLIIFLLCQTQLRG*GWGSPK
Trigger: CTTGGGGGACCCCCAGCCTCATCCTCTTAGTTGGGT...CTGGCATAGGAGGAAGATAATGAGGGAGTGGAATAAGGCTACAACAACGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATGCTGCTGCTGCTGCTaGTGTTGCTTGCTTCAGAAG +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVCCCCC*CCLLQK
Trigger: CTTCTGAAGCAAGCAACATCAGCAGCAGCAGCAGCA...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGGCCAGGATCCTTCTCTaGGCCTTCTTACCCCCATGC +
Preference number: 4 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLARILL*AFLPPC
Trigger: GCATGGGGGTAAGAAGGCTCAGAGAAGGATCCTGGC...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp AGATTGTTTTGCATAGCAAATCCGGGTCATACAAGGGCAGCTAAGGGGAGGAAACCTAACCCTTGCTGCTaGAAAGAAGCATGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLFCIANPGHTRAAKGRKPNPCC*KEAWGW
Trigger: CCAGCCCCATGCTTCTTTTCAGCAGCAAGGGTTAGG...TTTCCTCCCCTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGGTGCGCTCTGAAAGTTaGACCTCCTCAGGAGCCATC +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRVRSES*TSSGAI
Trigger: GATGGCTCCTGAGGAGGTTCAACTTTCAGAGCGCAC...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTACCCTACCCCCATGGCTaGAAATACCCTCCCCAATTT +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVPYPHG*KYPPQF
Trigger: AAATTGGGGAGGGTATTTTCAGCCATGGGGGTAGGG...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp TGGGATATAAACTCATCAGGCATGGGAAGGATTTCCAAATTTTGGCAATACACTTCCCCACAGTGCCAATaGCAGGCCGGCGAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: WDINSSGMGRISKFWQYTSPQCQ*QAGEVP
Trigger: AGGCACCTCGCCGGCCTGGCATTGGCACTGTGGGGA...AGTGTATTGCCAAAATTTGGAAATCCTTCCCATGCCTGATGAGTTTATATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCCACATCCAGGGCTTaGACAGACTCCAAGGGAACA +
Preference number: 4 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKATSRA*TDSKGT
Trigger: TGTTCCCTTGGAGTCTGTGCAAGCCCTGGATGTGGC...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCAAATACTGTGCCACTGTaGACTCCACAGTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPNTVPL*TPQSVH
Trigger: GTGGACAGACTGTGGAGTGCACAGTGGCACAGTATT...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCAATACTGTGCCACTGTaGACTCCACAGTCTGTCCAC +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPNTVPL*TPQSVH
Trigger: GTGGACAGACTGTGGAGTGCACAGTGGCACAGTATT...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCACAAACACCTCAAAACTCAGTCTATACAACATTCTGTTTCTTCAAAAACTCTTCCGGCCGCCGTACTaGAAGATGGGCGCCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PTNTSKLSLYNILFLQKLFRPPY*KMGAGS
Trigger: GCTGCCGGCGCCCATCTTGCAGTACGGCGGCCGGAA...GAGTTTTTGAAGAAACAGAATGTTGTATAGACTGAGTTTTGAGGTGTTTGTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGACACTGTTTTTGGGGTaGGAAGCAGGCGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKTLFLG*EAGDGP
Trigger: TGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATTGTAGGGGTGTGTAACATCTaGTCCCAGGAATATCACTGG +
Preference number: 4 (lower is better)
Translates to: FLGCEAGDGPDFDLNPIVGVCNI*SQEYHW
Trigger: CCAGTGATATTCCTGGGAGCAGATGTTACACACCCC...TACAATGGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTCTTCAATGATCTCTTaGCGTGGTCGCTGTACCCGC +
Preference number: 4 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWSSMIS*RGRCTR
Trigger: GCGGGTACAGCGACCACGGCAAGAGATCATTGAAGA...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCGGATGCCTGCGTGGCTaGACAGATAGAAGTCAAACT +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPGCLRG*TDRSQT
Trigger: AGTTTGACTTCTATCTGTGCAGCCACGCAGGCATCC...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGATCTGGAGCTCATCTaGTGTGAAACGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSDLELI*CETVVI
Trigger: GATGACAACCGTTTCACAGCAGATGAGCTCCAGATC...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTAGATCTGGAGCTCATCTaGTGTGAAACGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLDLELI*CETVVI
Trigger: GATGACAACCGTTTCACAGCAGATGAGCTCCAGATC...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGATCTGGAGCTCATCTaGTGTGAAACGGTTGTCATC +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKDLELI*CETVVI
Trigger: GATGACAACCGTTTCACAGCAGATGAGCTCCAGATC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAATCCCGCCCATTGCTCTaGCCCGATATGTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQSRPLL*PDMWLP
Trigger: GGGGAGCCACATATCGGGGCAGAGCAATGGGCGGGA...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAGAGGTAACAGCGTTCTaGCTTCAAGCGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVEVTAF*LQAKYM
Trigger: CATGTACTTCGCTTGAAGGCAGAACGCTGTTACCTC...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp TGCCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGGAATAAATGTCACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: CLLSRPRHFSAYHQRNKCHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...ACATTTATTCCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp AAGAAACGTCCAACCTTGTTAGTTACACATGATTCCAGGTCCAAAACTGTCCCAGCTGGTGGTCTGTCTTaGTGGCCCTGTTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: KKRPTLLVTHDSRSKTVPAGGLS*WPCSPL
Trigger: GAGTGGGGAACAGGGCCAGCAAGACAGACCACCAGC...TGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTGCTGGTGGTCTGTCTTaGTGGCCCTGTTCCCCACTC +
Preference number: 4 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIAAGGLS*WPCSPL
Trigger: GAGTGGGGAACAGGGCCAGCAAGACAGACCACCAGC...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGCTGCCCATCTTGAGTaGTGGCCTTATTCACAAACA +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKAAHLE*WPYSQT
Trigger: TGTTTGTGAATAAGGCCAGCACTCAAGATGGGCAGC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGCCAGCTAATAGTCAGTaGACCCTTGGCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWPANSQ*TLGCPS
Trigger: AGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGG...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTACAACTGGTCAAAATCTaGTCCATGTCCAATCTGCTC +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELQLVKI*SMSNLL
Trigger: GAGCAGATTGGACATGGAGCAGATTTTGACCAGTTG...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGAGGAATGCCCAGAGGTaGCAGGACAAGCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKRNAQR*QDKPSL
Trigger: CAGTGAAGGCTTGTCCTGGCACCTCTGGGCATTCCT...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp TCCAGCCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAAACCCTTCCTCCTTTTaGAGCTCACTCTCATTAATA +
Preference number: 4 (lower is better)
Translates to: SSPGGHLWAWGTGSWSSANPSSF*SSLSLI
Trigger: TATTAATGAGAGTGAGCTGCAAAAGGAGGAAGGGTT...TGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTACAAATACTCAGTGCATaGAGGAAAGACAGAGTGGCC +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALQILSA*RKDRVA
Trigger: GGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTG...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCCTTCCTATCTACTTCTaGTATCCAGGAACCCACCTC +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSLPIYF*YPGTHL
Trigger: GAGGTGGGTTCCTGGATAGCAGAAGTAGATAGGAAG...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCAAGGGAACAGGGATCTaGCCGCTGACCAGGGCCTCA +
Preference number: 4 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFKGTGI*PLTRAS
Trigger: TGAGGCCCTGGTCAGCGGCCAGATCCCTGTTCCCTT...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATAATCATGGTCGAGGTCTaGTTGTCGGTCAGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMIIMVEV*LSVSFL
Trigger: TAAAAAGCTGACCGACAACCAGACCTCGACCATGAT...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCATCATGGTCGAGGTCTaGTTGTCGGTCAGCTTTTTA +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPIMVEV*LSVSFL
Trigger: TAAAAAGCTGACCGACAACCAGACCTCGACCATGAT...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGGATCTAAGTTGTAGCTaGCATTCTTCATCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQDLSCS*HSSSGD
Trigger: GTCGCCTGATGAAGAATGCCAGCTACAACTTAGATC...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAAGAAATCTTCCGCAGCTaGTCTGTGAAGTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKEIFRS*SVKFLS
Trigger: GCTCAAGAACTTCACAGACCAGCTGCGGAAGATTTC...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCCACCGGCGTCTTCCCTaGCAGGATGACAATAATGAG +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSHRRLP*QDDNNE
Trigger: CTCATTATTGTCATCCTGCCAGGGAAGACGCCGGTG...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGAAAACGGCAGAGCGCTaGTGTGGGACTAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: KGTKGCSSAALPLQGRHWKTAER*CGTRML
Trigger: CAACATCCTAGTCCCACACCAGCGCTCTGCCGTTTT...CCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTAAATGATCTCTTGCCGTaGTCGCTGTACCCGCACAGT +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVNDLLP*SLYPHS
Trigger: ACTGTGCGGGTACAGCGACCACGGCAAGAGATCATT...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ACACTGTTTTTGGGGTGCGAAGCAGGCGATGGCCCAGACTTTGATCTCAATCCCTCAAACTCAAATGGGTaGGTGATGTTGGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: TLFLGCEAGDGPDFDLNPSNSNG*VMLVST
Trigger: AGTGGACACCAACATCACCCACCCATTTGAGTTTGA...GGGATTGAGATCAAAGTCTGGGCCATCGCCTGCTTCGCACCCCAAAAACAGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCAATGGGATGGTCGGCTaGTGCCCTGGATGCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFNGMVG*CPGCLR
Trigger: ACGCAGGCATCCAGGGCACCAGCCGACCATCCCATT...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTTCCTTGTCCACCAGGTaGTATCGTGCCCGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: QFLQMQNSWLSGWRFVGSSLSTR*YRARKA
Trigger: GGCTTTCCGGGCACGATACCACCTGGTGGACAAGGA...AGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTAACAGCTCCTGGGGCTTaGAAAGCTTTCTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLTAPGA*KAFFYP
Trigger: TGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGT...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTACAGCTCCTGGGGCTTaGAAAGCTTTCTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSTAPGA*KAFFYP
Trigger: TGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGT...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp GTTTGTGCTACGTTTTGTGAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCTGCTTCCTCTGGATTTaGGTGGCACAGCTCCTGGGG +
Preference number: 4 (lower is better)
Translates to: VCATFCELLNNVANQNRTCFLWI*VAQLLG
Trigger: CCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGCA...GGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGTAGCACAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGGTGGTCTGTCTTGCTaGCCCTGTTCCCCACTCTTA +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKGGLSC*PCSPLL
Trigger: TAAGAGTGGGGAACAGGGCCAGCAAGACAGACCACC...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGATTGTTTTGCATAGCAAATCCGGGTCATACAAGGGCAGCTAAGGGGAGGAAAGAGATTTCTGGCTGGTaGTCTGTCTTGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RLFCIANPGHTRAAKGRKEISGW*SVLLAL
Trigger: CAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTC...TTTCCTCCCCTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTTCAGAGATTTCTGGCTaGTGGTCTGTCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSSEISG*WSVLLA
Trigger: GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGA...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTAGACACCTGTGTGTATaGTGGGCACCAGTGCTGCCC +
Preference number: 4 (lower is better)
Translates to: QFLQMQNSWLSGWRFVGSRHLCV*WAPVLP
Trigger: GGGCAGCACTGGTGCCCACCATACACACAGGTGTCT...AGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACAGTATTACTAGGGGCTaGATGTCTGTCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHSITRG*MSVREE
Trigger: CTCCTCCCTGACAGACATCCAGCCCCTAGTAATACT...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAGAGGTTTGTTGGGTCTaGGGTATTTCTTCCCCATCT +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVEVCWV*GISSPS
Trigger: AGATGGGGAAGAAATACCCCAGACCCAACAAACCTC...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR CCA 90 bp GTCCTATTAAGTCGGAGGAAAGCGAAAACCAGAAAATACCTCCTTCCCAATCTGAGGAAGGATGGAGCCTaGACCCCATCTTGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: VLLSRRKAKTRKYLLPNLRKDGA*TPSWGD
Trigger: ATCGCCCCAAGATGGGGTCCAGGCTCCATCCTTCCT...CAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTATTCTGTTCTTCAGCTaGGCTTGTGCCTATAGGGCA +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSILFFS*ACAYRA
Trigger: TGCCCTATAGGCACAAGCCCAGCTGAAGAACAGAAT...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
CDS-3UTR CCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACGCCACCTGCTCCCTATaGACATTTGCAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHATCSL*TFANAG
Trigger: ACCAGCATTTGCAAATGTCCATAGGGAGCAGGTGGC...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGACATACCAATTAGGCTaGACTGTGTGCACAGGAAAG +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQTYQLG*TVCTGK
Trigger: CTTTCCTGTGCACACAGTCCAGCCTAATTGGTATGT...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674304.1
CDS-3UTR CCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCACACATGCCCACCACATaGCTGCTAAGTGCAACATCA +
Preference number: 4 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPHMPTT*LLSATS
Trigger: TGATGTTGCACTTAGCAGCCATGTGGTGGGCATGTG...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGCACATGCCCACCACATaGCTGCTAAGTGCAACATCA +
Preference number: 4 (lower is better)
Translates to: YQILSACRKDRVASCRFKHMPTT*LLSATS
Trigger: TGATGTTGCACTTAGCAGCCATGTGGTGGGCATGTG...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAATTTCACAATGGACTaGACAAGGTACAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLNFTMD*TRYSSK
Trigger: CTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATT...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GAAAACGCACGGCGTAAATGGGCCCCGCCTGTGCTACAGCTATACTGGTTGGCTAATTTCACAATGGACTaGACAAGGTACAGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ENARRKWAPPVLQLYWLANFTMD*TRYSSK
Trigger: CTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATT...AGCCAACCAGTATAGCTGTAGCACAGGCGGGGCCCATTTACGCCGTGCGTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAAAGAGGCTGGGCCCAGTaGCTTGTGGCTTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKRGWAQ*LVAYAC
Trigger: ACAGGCATAAGCCACAAGCCACTGGGCCCAGCCTCT...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAAACAGTGCCAGTACCTaGCACATAGCAGCATTCAGT +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKANSAST*HIAAFS
Trigger: ACTGAATGCTGCTATGTGCCAGGTACTGGCACTGTT...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CCCAGGTGGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAACAGTGATAAACCTTTaGGGTGGGCTAGTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: PRWTSLGLGNRFLVFCSQTVINL*GGLVFF
Trigger: GAAAAAGACTAGCCCACCCCAAAGGTTTATCACTGT...TTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCAGAGCTTCTCTGCTTTTaGTTCCCTTGGCCAGGAACC +
Preference number: 4 (lower is better)
Translates to: NSASSHLKTQTPFQGENAELLCF*FPWPGT
Trigger: GGTTCCTGGCCAAGGGAACCAAAAGCAGAGAAGCTC...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAGTGCTACAGCTATACTaGTTGGCTTCCAATTCTCCC +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALVLQLY*LASNSP
Trigger: GGGAGAATTGGAAGCCAACCAGTATAGCTGTAGCAC...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
3UTR CAA 72 bp AGATATCCTATGGGCCAGCTAATAGTCAGTGCACCCTaGGCTGCCCATCTTGAGTGCTGGCCTTATTCACAA +
Preference number: 4 (lower is better)
Translates to: RYPMGQLIVSAP*AAHLECWPYSQ
Trigger: TTGTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGGCCCATAGGATATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGAATTGGCCAGGAGCTTaGTTGGTTTCCCCACAGTGC +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRNWPGA*LVSPQC
Trigger: GCACTGTGGGGAAACCAATCAAGCTCCTGGCCAATT...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTCCACCACTTCCCGGTTaGCTCTACGGGGACACTTAT +
Preference number: 4 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRIPPLPG*LYGDTY
Trigger: ATAAGTGTCCCCGTAGAGTCAACCGGGAAGTGGTGG...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp GTTTGTGCTACGTTTTGTGAGTTGCTGAACAATGTAGCCAACCAGAACAGAACCCCACCACTTCCCGGTTaGCTCTACGGGGACACTTAT +
Preference number: 4 (lower is better)
Translates to: VCATFCELLNNVANQNRTPPLPG*LYGDTY
Trigger: ATAAGTGTCCCCGTAGAGTCAACCGGGAAGTGGTGG...GGTTCTGTTCTGGTTGGCTACATTGTTCAGCAACTCACAAAACGTAGCACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GTATTACTAGGGGCTGGATGTCTGTCAGGGAGGAGAAGTAAGGTGGGGCAGAAACAATGGGCAGTGCTGTaGCAGTGTAAATGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VLLGAGCLSGRRSKVGQKQWAVL*QCKCSS
Trigger: AGAAGAACATTTACACTGTCACAGCACTGCCCATTG...TTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTCTGTCCACAGTGGGTaGCTTCCACCTTCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDSVHSG*LPPSGP
Trigger: AGGGCCTGAAGGTGGAAGTCACCCACTGTGGACAGA...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp GGACATCTCTGGGCTTGGGGAACAGGTTCTTGGTCTTCTGCAGTCAAGGAGCTAGCAGATGGGGATACTTaGGCTGAAGGTTATATTTCT +
Preference number: 4 (lower is better)
Translates to: GHLWAWGTGSWSSAVKELADGDT*AEGYIS
Trigger: AGAAATATAACCTTCAGCTCAAGTATCCCCATCTGC...TAGCTCCTTGACTGCAGAAGACCAAGAACCTGTTCCCCAAGCCCAGAGATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGTCTTCATCAGGCGACTaGTCTCCTCCTGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKSSSGD*SPPVCL
Trigger: CAGACAGACAGGAGGAGATCAGTCGCCTGATGAAGA...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGGGACAGAGTCTGAGGTaGGGTCTTGACCACGTTCTT +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRGQSLR*GLDHVL
Trigger: AAGAACGTGGTCAAGACCTCACCTCAGACTCTGTCC...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AATCTGTCTCTCTTTTGCCAGACACGGTTCTGTCAGCATTTCCTTCCCAGAATTAGGTTGGACAGAGTCTaGGGTGAGGTCTTGACCACG +
Preference number: 4 (lower is better)
Translates to: NLSLFCQTRFCQHFLPRIRLDRV*GEVLTT
Trigger: CGTGGTCAAGACCTCACCTCAGACTCTGTCCAACCT...AATTCTGGGAAGGAAATGCTGACAGAACCGTGTCTGGCAAAAGAGAGACAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp ATAATTTCACAATGGACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAACGCAGAGTATCCTGGTaGACCTGCACGGCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: IISQWTGQGTAQSRTQTQRRVSW*TCTALA
Trigger: GGCCAAAGCCGTGCAGGTTCACCAGGATACTCTGCG...TTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTCCATTGTGAAATTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCACTTTCTTCTATCCAGTaGGGTAACAGCGTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPLSSIQ*GNSVLP
Trigger: AGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAG...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR TCA 90 bp AATAGCGCCTCGTCACACTTGAAAACCCAAACTCCTTTCCAGGGTGAAAACGCAGAGGAAATTCCACACTaGAGTTGCAACTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: NSASSHLKTQTPFQGENAEEIPH*SCNSPS
Trigger: GGATGGGGAGTTGCAACTTCAGTGTGGAATTTCCTC...TGCGTTTTCACCCTGGAAAGGAGTTTGGGTTTTCAAGTGTGACGAGGCGCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CATTCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATGCCAGGATCCTTCTCTaGGCCTTCTTACCCCCATGC +
Preference number: 4 (lower is better)
Translates to: HSDGSMFLGYKLIRHGKDARILL*AFLPPC
Trigger: GCATGGGGGTAAGAAGGCTCAGAGAAGGATCCTGGC...ATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR TCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGCTGGGAAAGTCACTCTaGTTCATGTTTCTCATCTGT +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQLGKSL*FMFLIC
Trigger: ACAGATGAGAAACATGAATCAGAGTGACTTTCCCAG...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000373204.6
CDS-3UTR TCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGTATCCTCAACCCCTCTaGTTCTGGAACCGGTTCCCT +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRYPQPL*FWNRFP
Trigger: AGGGAACCGGTTCCAGAATCAGAGGGGTTGAGGATA...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAGTTGCCAATGGGCAGTaGTGTGACAGTGTAAATGTT +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVVANGQ*CDSVNV
Trigger: AACATTTACACTGTCACAGCACTGCCCATTGGCAAC...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR GCA 90 bp AGCTGGGATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGTCTTCAATGATCTCTTaGCGTGGTCGCTGTACCCGC +
Preference number: 4 (lower is better)
Translates to: SWDVTTLPNSLILVSTEKSSMIS*RGRCTR
Trigger: GCGGGTACAGCGACCACGGCAAGAGATCATTGAAGA...CTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp ACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGCACTGGTTACCCGAGGTAACAGCGTTCTaGCTTCAAGCGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: TKGCSSAALPLQGRHWLPEVTAF*LQAKYM
Trigger: CATGTACTTCGCTTGAAGGCAGAACGCTGTTACCTC...GGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp GGATCTAGCTGTGGCCTTTATCATGGTCGAGGTCTGGTTGTCGGTCAGCTTTTTGAGGTAACAGCGTTCTaGCTTCAAGCGAAGTACATG +
Preference number: 4 (lower is better)
Translates to: GSSCGLYHGRGLVVGQLFEVTAF*LQAKYM
Trigger: CATGTACTTCGCTTGAAGGCAGAACGCTGTTACCTC...AAAAAGCTGACCGACAACCAGACCTCGACCATGATAAAGGCCACAGCTAGATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR GCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAACACCTCCCTCCTCCTTaGTTCCTCTGGATTTGGGTG +
Preference number: 4 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKHLPPP*FLWIWV
Trigger: CACCCAAATCCAGAGGAAGCAAGGAGGAGGGAGGTG...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAAAAAGGTTGCAGTTCTaGAGCATTACCGTTACAGGG +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVKRLQF*SITVTG
Trigger: CCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTT...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR GCA 90 bp ACCATTGCCAAGAGGATGGTGGTGAAGATGCTACAGTCCAGAACAACAGGACACAGGTTCTTGGTCTTCTaGAGTCAAGGAGCTAAGCCT +
Preference number: 4 (lower is better)
Translates to: TIAKRMVVKMLQSRTTGHRFLVF*SQGAKP
Trigger: AGGCTTAGCTCCTTGACTGCAGAAGACCAAGAACCT...GTGTCCTGTTGTTCTGGACTGTAGCATCTTCACCACCATCCTCTTGGCAATGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATGTAGTTTCCAAAACTaGCTTTTGGCTAGTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLCSFQN*LLASLR
Trigger: TCTCAAACTAGCCAAAAGGCAGTTTTGGAAACTACA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR GCA 90 bp CCCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGCACTTCTTGATCCACTaGCCACCCAGCCCATACTCA +
Preference number: 4 (lower is better)
Translates to: PKERYKRLQFCSITVTGKHFLIH*PPSPYS
Trigger: TGAGTATGGGCTGGGTGGGCAGTGGATCAAGAAGTG...CTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CCACCCATCTATGGTGGGGCACCTGTTAGTCTACTACAGTATTGCCTTGGTAGCTCCAGGACCAAACAATaGAGGCTCCCAGTCTTTTTA +
Preference number: 4 (lower is better)
Translates to: PPIYGGAPVSLLQYCLGSSRTKQ*RLPVFL
Trigger: TAAAAAGACTGGGAGCCTGCATTGTTTGGTCCTGGA...GCTACCAAGGCAATACTGTAGTAGACTAACAGGTGCCCCACCATAGATGGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTGGAGTACTTCTGTCATaGTGTGTGCCTTCTAAGCCG +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSGVLLS*CVPSKP
Trigger: CGGCTTAGAAGGCACACAGCATGACAGAAGTACTCC...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp GGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAGTGCAGAGAAATCAGTaGGCTCTGAAAGTTGAACCT +
Preference number: 4 (lower is better)
Translates to: GGRKTGSCHFKAKCHSALVQRNQ*ALKVEP
Trigger: AGGTTCAACTTTCAGAGCGCACTGATTTCTCTGCAC...TAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR GCA 90 bp CCTCCCACCCACTTTCTCAAGCCCCTCACTTTCCCATCTAAAGTATCAAACCCAAGTCTACTACAGTATTaGCTTGGTAGCCCTTTGCCC +
Preference number: 4 (lower is better)
Translates to: PPTHFLKPLTFPSKVSNPSLLQY*LGSPLP
Trigger: GGGCAAAGGGCTACCAAGGCAATACTGTAGTAGACT...TGGGTTTGATACTTTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCATGCCAGGTGCCTCATaGCCACATCCAGGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFMPGAS*PHPGLA
Trigger: TGCAAGCCCTGGATGTGGCCATGAGGCACCTGGCAT...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATTTCTTCCCCATCTAGATCTAAGTTGTAGCTaGCATTCTTCATCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: SWLSGWRFVGSGVFLPHLDLSCS*HSSSGD
Trigger: GTCGCCTGATGAAGAATGCCAGCTACAACTTAGATC...TAGATGGGGAAGAAATACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTGCTGGCCCTGTTCCCCACTCTTACACCACCTCTATAGAAGGAAACAAGGCAGATCTAAGTTGTAGCTaGCATTCTTCATCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: LAGPVPHSYTTSIEGNKADLSCS*HSSSGD
Trigger: GTCGCCTGATGAAGAATGCCAGCTACAACTTAGATC...TGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAGGGCCAGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp AGCTCAATGAATGAGGAAGTCAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGCACCCTGATTGGGTGTaGCAATGGCCCGGTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SSMNEEVNSFKCKIAGFLHPDWV*QWPGSG
Trigger: GCCGGAACCGGGCCATTGCCACACCCAATCAGGGTG...CAGAAAGCCAGCTATTTTGCATTTGAAGGAATTGACTTCCTCATTCATTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGAATGATCTCTTGCCGTaGTCGCTGTACCCGCACAGT +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRNDLLP*SLYPHS
Trigger: ACTGTGCGGGTACAGCGACCACGGCAAGAGATCATT...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTATGCAGGCATCACGAATaGCCAGTAGCTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVCRHHE*PVAHSG
Trigger: TCCACTATGAGCTACTGGCCATTCGTGATGCCTGCA...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GATGTTACCACTCTTCCCAATTCGCTCATTCTTGTCAGCACAGAAAAGGCGGGTTGCAGGCATCACGAATaGCCAGTAGCTCATAGTGGA +
Preference number: 4 (lower is better)
Translates to: DVTTLPNSLILVSTEKAGCRHHE*PVAHSG
Trigger: TCCACTATGAGCTACTGGCCATTCGTGATGCCTGCA...ACCCGCCTTTTCTGTGCTGACAAGAATGAGCGAATTGGGAAGAGTGGTAACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635259.1
CDS-3UTR CCA 90 bp TTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGAGGTAGAAGTCAAACTCAAATaGGTGGGTGATGTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: FGWHSSWGLESFLLSSEVEVKLK*VGDVGV
Trigger: GACACCAACATCACCCACCCATTTGAGTTTGACTTC...TACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp CTTTTTCCTTTATGTCCATCCCCTAACACTCAAACCCAGGATACCCAAATAGCTTCCTTGTCCACCAGGTaGTATCGTGCCCGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: LFPLCPSPNTQTQDTQIASLSTR*YRARKA
Trigger: GGCTTTCCGGGCACGATACCACCTGGTGGACAAGGA...AGCTATTTGGGTATCCTGGGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TACCAAATACTCAGTGCATGCAGGAAAGACAGAGTGGCCAGCTGCCGCTTTAAGACAGCTCCTGGGGCTTaGAAAGCTTTCTTCTATCCA +
Preference number: 4 (lower is better)
Translates to: YQILSACRKDRVASCRFKTAPGA*KAFFYP
Trigger: TGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGT...CTTAAAGCGGCAGCTGGCCACTCTGTCTTTCCTGCATGCACTGAGTATTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGATGGCTCAATGTTTCTGGGATATAAACTCATCAGGCATGGGAAGGATTTCTCCTCTGGATTTGGGTaGCACAGCTCCTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SDGSMFLGYKLIRHGKDFSSGFG*HSSWGL
Trigger: CAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAGGA...GAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGAGATTTCTGGCTGGTaGTCTGTCTTGCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QFLQMQNSWLSGWRFVGSEISGW*SVLLAL
Trigger: CAGGGCCAGCAAGACAGACCACCAGCCAGAAATCTC...AGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGTCAGAGATTTCTGGCTaGTGGTCTGTCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRSEISG*WSVLLA
Trigger: GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGA...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGTGATATCAGAGATTTCTaGCTGGTGGTCTGTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SGFGWHSSWGLESFLLSSDIRDF*LVVCLA
Trigger: AGCAAGACAGACCACCAGCCAGAAATCTCTGATATC...ACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000635259.1
ENST00000674304.1
CDS-3UTR CCA 90 bp GGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTAAGTGCCATAGTGCCTTAAGTGGAGGAGAAGTAAGGTaGGGCAGAAAATGTGGACAG +
Preference number: 4 (lower is better)
Translates to: GRKTGSCHFKAKCHSALSGGEVR*GRKCGQ
Trigger: CTGTCCACATTTTCTGCCCCACCTTACTTCTCCTCC...ACTTAAGGCACTATGGCACTTAGCTTTGAAGTGACACGACCCTGTCTTCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTGGGGTAAGTATTACTAGGGGCTaGATGTCTGTCAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LQMQNSWLSGWRFVGSGVSITRG*MSVREE
Trigger: CTCCTCCCTGACAGACATCCAGCCCCTAGTAATACT...TACCCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GACTGGACAAGGTACAGCTCAAAGCAGGACACAAACACAAATCTCAAAGGGAAAAGCTGGCTTTCTGGCTaGAGGTTTGTTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DWTRYSSKQDTNTNLKGKSWLSG*RFVGSG
Trigger: CCCAGACCCAACAAACCTCCAGCCAGAAAGCCAGCT...TTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTTGTCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GAAAAGAAGCATGGGGCTGGCTGGCTCTTTCCCAAGGGAGTCTGCCAGATGATACAAATGCAAAATAGCTaGCTTTCTGGCTGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: EKKHGAGWLFPKGVCQMIQMQNS*LSGWRF
Trigger: AAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTG...TATCATCTGGCAGACTCCCTTGGGAAAGAGCCAGCCAGCCCCATGCTTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CTCTGGATTTGGGTGGCACAGCTCCTGGGGCTTGGAAAGCTTTCTTCTATCCAGCAAATGCAAAATAGCTaGCTTTCTGGCTGGAGGTTT +
Preference number: 4 (lower is better)
Translates to: LWIWVAQLLGLGKLSSIQQMQNS*LSGWRF
Trigger: AAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTG...CTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000373206.5
ENST00000674304.1
CDS-3UTR CCA 90 bp ATATTCGTTGTTGTAGCCTTATTCCACTCCCTCATTATCTTCCTCCTATGCCAGAGGAAGGATGGAGCCTaGACCCCATCTTGGGGCGAT +
Preference number: 4 (lower is better)
Translates to: IFVVVALFHSLIIFLLCQRKDGA*TPSWGD
Trigger: ATCGCCCCAAGATGGGGTCCAGGCTCCATCCTTCCT...CTGGCATAGGAGGAAGATAATGAGGGAGTGGAATAAGGCTACAACAACGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CAATTCCTTCAAATGCAAAATAGCTGGCTTTCTGGCTGGAGGTTTGTTGGGTCTTGCACAGAGGAAGGATaGAGCCTGGACCCCATCTTG +
Preference number: 4 (lower is better)
Translates to: QFLQMQNSWLSGWRFVGSCTEEG*SLDPIL
Trigger: CAAGATGGGGTCCAGGCTCCATCCTTCCTCTGTGCA...AGACCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CCAAAGAAAGGTACAAAAGGTTGCAGTTCTGCAGCATTACCGTTACAGGGAAGGGCTGGCCTCCAAGCCTaGGCTAGGTCTAAAGTAATC +
Preference number: 4 (lower is better)
Translates to: PKKGTKGCSSAALPLQGRAGLQA*ARSKVI
Trigger: GATTACTTTAGACCTAGCCCAGGCTTGGAGGCCAGC...CCTTCCCTGTAACGGTAATGCTGCAGAACTGCAACCTTTTGTACCTTTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTCTCACATGGGCCAAGATTAGAGTCAACTGGGCACCTGAGTTCAAATCTCTTCGCCACCTGCTCCCTATaGACATTTGCAAATGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSHGPRLESTGHLSSNLFATCSL*TFANAG
Trigger: ACCAGCATTTGCAAATGTCCATAGGGAGCAGGTGGC...GAAGAGATTTGAACTCAGGTGCCCAGTTGACTCTAATCTTGGCCCATGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000373204.6
ENST00000674426.1
CDS-3UTR CCA 90 bp CAACACCACTTCTCCATCTGCATGCACCACCTTTCAAACAGGAATAATCTCAAGCCAGGTGGACATCTCTaGGCTTGGGGAACAGGTTCT +
Preference number: 4 (lower is better)
Translates to: QHHFSICMHHLSNRNNLKPGGHL*AWGTGS
Trigger: AGAACCTGTTCCCCAAGCCCAGAGATGTCCACCTGG...CTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp GGAGGAAATGGTAGTTCTAACTCTACAGGCCAGGATTTAGACCCTTCTTCCTCCAGGAGTGGACAGGTGTaGAAAATGCCAGAAACCCTC +
Preference number: 4 (lower is better)
Translates to: GGNGSSNSTGQDLDPSSSRSGQV*KMPETL
Trigger: GAGGGTTTCTGGCATTTTCCACACCTGTCCACTCCT...GGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACCATTTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp CTGGTTACCCACCAGCGGGCGGAAGGAAGACAGGGTCGTGTCACTTCAAAGCTATGGATCAGGTTGGACTaGATAAACAATCAAAGAACA +
Preference number: 4 (lower is better)
Translates to: LVTHQRAEGRQGRVTSKLWIRLD*INNQRT
Trigger: TGTTCTTTGATTGTTTATCCAGTCCAACCTGATCCA...TAGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000373204.6
ENST00000674304.1
ENST00000674426.1
CDS-3UTR CCA 90 bp TGCCTTCTAAGCCGGCCTAGGCATTTCTCAGCCTATCATCAGAGGAATAAATGTTTCCCCTCCCTTTCTTaGATGCCCAAACAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CLLSRPRHFSAYHQRNKCFPSLS*MPKQQP
Trigger: TGGCTGCTGTTTGGGCATCCAAGAAAGGGAGGGGAA...ACATTTATTCCTCTGATGATAGGCTGAGAAATGCCTAGGCCGGCTTAGAAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000373204.6