Pregenerated sensors for AGMAT (Homo sapiens)
Ensembl gene IDs: ENSG00000116771Ensembl transcript IDs: ENST00000375826.4
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGGGCAGGAGAATCGATTaGACTCGGGAGGCGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRGRRID*TREAEV Trigger: AACCTCCGCCTCCCGAGTTCAATCGATTCTCCTGCC...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAATGAACCGAGATCATaGCATTGCACTCCAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRNEPRS*HCTPAW Trigger: CCAGGCTGGAGTGCAATGGCATGATCTCGGTTCATT...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR-3UTR CCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGACATTGCACTCCAGCCTaGGTGACAAGCAAAACTCTA | + |
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Preference number: 2 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGHCTPA*VTSKTL Trigger: TAGAGTTTTGCTTGTCACCCAGGCTGGAGTGCAATG...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGCTCATAAGTTCTTCTTaGGAACTTGTCAGCGACGCA | + |
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Preference number: 2 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRLISSS*ELVSDA Trigger: TGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAG...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR CAA 90 bp | GGCATAAACTCTTTAGTTCTCAGACTGCTTACTCATAAGTTCTTCTaGAGAACTTGTCAGCGACGCAATCTGTTTTGTCTTGAAGAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GINSLVLRLLTHKFF*RTCQRRNLFCLEEH Trigger: GTGCTCTTCAAGACAAAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCTGAGAACTAAAGAGTTTATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR CAA 90 bp | GCATTGCAAGATGATGATTTGATTATGGACACATTATCAACAGAATaGAATTTGCATGGAACTCAAGACACGCTTAAGATCACCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: ALQDDDLIMDTLSTE*NLHGTQDTLKITTA Trigger: TGCTGTGGTGATCTTAAGCGTGTCTTGAGTTCCATGCAAATTCAATTCTGTTGATAATGTGTCCATAATCAAATCATCATCTTGCAATGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR CAA 90 bp | ATGTCTGATAATTATGGGGTAGCCCTTGCATTGCAAGATGATGATTaGATTATGGACACATTATCAACAGAATTGAATTTGCATGGAACT | + |
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Preference number: 2 (lower is better) Translates to: MSDNYGVALALQDDD*IMDTLSTELNLHGT Trigger: AGTTCCATGCAAATTCAATTCTGTTGATAATGTGTCCATAATCAAATCATCATCTTGCAATGCAAGGGCTACCCCATAATTATCAGACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGACCGAGATCATGCCATaGCACTCCAGCCTGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKTEIMP*HSSLGD Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGATCTCGGT...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGAGGCAGGAGAATCGATaGAACTCGGGAGGCGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKRQENR*NSGGGG Trigger: ACCTCCGCCTCCCGAGTTCAATCGATTCTCCTGCCT...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTAACTCATAAGTTCTTCTaGAGAACTTGTCAGCGACGC | + |
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Preference number: 3 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVTHKFF*RTCQRR Trigger: GCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGT...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGGTTCTTCTTGAGAACTaGTCAGCGACGCAATCTGTT | + |
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Preference number: 3 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKVLLEN*SATQSV Trigger: AACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAAC...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR TCA 72 bp | AGTTTAGAAGACATTTTGTGTACCCTTCTAGGCCTCTaGGCAAGAAGTTTCTTCATTAGGCTCTCCGTGTTA | + |
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Preference number: 3 (lower is better) Translates to: SLEDILCTLLGL*ARSFFIRLSVL Trigger: TAACACGGAGAGCCTAATGAAGAAACTTCTTGCTCAGAGGCCTAGAAGGGTACACAAAATGTCTTCTAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| 3UTR GCA 72 bp | TTTTTACTTACGTTCACAGTGGTCCTAAAACCAAGATaGAGCCCTAAGCACCTCATAGGAGAAGCTGTATTT | + |
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Preference number: 3 (lower is better) Translates to: FLLTFTVVLKPR*SPKHLIGEAVF Trigger: AAATACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAGTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGCCGCCGCGATCTGGCTaGTCCCGAACGGCGAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRPPRSG*SRTARR Trigger: TCGCCTCGCCGTTCGGGACCAGCCAGATCGCGGCGG...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGGAGGCCGCCGCGATCTaGCTGGTCCCGAACGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSREAAAI*LVPNGE Trigger: CTCGCCGTTCGGGACCAGCCAGATCGCGGCGGCCTC...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGCCCTCGGGGGAGGTCTaGACCGGCAGGCGCATCATG | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRPSGEV*TGRRIM Trigger: CATGATGCGCCTGCCGGTGCAGACCTCCCCCGAGGG...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGCAGCAGCCTCAGCATTaGCGCGCGCGGCCAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRQQPQH*RARPRP Trigger: AGGTCTTGGCCGCGCGCGGCAATGCTGAGGCTGCTG...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTAGTGTGCGCATCCACGTaGAGCAGCCCCACTGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVVCAST*SSPTGP Trigger: TGGCCCAGTGGGGCTGCTGCACGTGGATGCGCACAC...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGTCGCCCCAGGCCGGTTaGAGGTCCCAGTATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRSPQAG*RSQYPG Trigger: CCCTGGATACTGGGACCTCCAACCGGCCTGGGGCGA...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTAGCAACCATGAGGGACTaGAAGGGGAGGGCCCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVATMRD*KGRAPV Trigger: CACGGGGGCCCTCCCCTTCCAGTCCCTCATGGTTGC...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAACTCCTGACCTCAGGTaGTCCTCCCGCCTAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGTPDLR*SSRLGL Trigger: CAGGCCTAGGCGGGAGGATCACCTGAGGTCAGGAGT...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTATCGGTCGTGTCCGTGTaGGCATCCACGTGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVSVVSV*ASTCSS Trigger: GCTGCTGCACGTGGATGCGCACACGGACACGACCGA...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTTGGCGGCGCCCCGGATaGAAGAGCCCTGCGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFWRRPG*KSPAAG Trigger: TCCTGCCGCAGGGCTCTTTCATCCGGGGCGCCGCCA...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGCTAAGATCGGGCCACTaGACTCCAGCCTGGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRLRSGH*TPAWGT Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCCCGATCTTAG...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CCA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTCCGGCAGGCGCATCATaGAGCAGACGCCCACCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFPAGAS*SRRPPA Trigger: GGCCGGTGGGCGTCTGCTCCATGATGCGCCTGCCGG...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAAGGTGTCCCTGTCCCTaGCGCATAGGCAGGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGRCPCP*RIGRIQ Trigger: CTGGATCCTGCCTATGCGCCAGGGACAGGGACACCT...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGTGTCCCAAGCATCACTaGTTCTTCCCGGATGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRCPKHH*FFPDAA Trigger: CGCCGCATCCGGGAAGAATCAGTGATGCTTGGGACA...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTACCTGCCTCAGCTTCCTaGGTAGCTGGGACTATAGGC | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVPASAS*VAGTIG Trigger: GCCTATAGTCCCAGCTACTCAGGAAGCTGAGGCAGG...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTCGGATGAAAGAGCCCTaGGGCAGGACGCGCGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFRMKEP*GRTRAH Trigger: GTGGGCGCGCGTCCTGCCGCAGGGCTCTTTCATCCG...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTACTGATTCTTCCCGGATaGGGCGAGGTCCGAATCTCG | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVLILPG*GEVRIS Trigger: CGAGATTCGGACCTCGCCGCATCCGGGAAGAATCAG...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTATGGAAGAGCCCCGGATaGCAATCTGCACCACACGCT | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVWKSPG*QSAPHA Trigger: AGCGTGTGGTGCAGATTGGCATCCGGGGCTCTTCCA...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGGTTTGCCTCCCATCTaGTGCCTGACTTCCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGGLPPI*CLTSPI Trigger: GATGGGGGAAGTCAGGCAGCAGATGGGAGGCAAACC...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGTGGAGTGTAGTGGCATaGCCTCAGCTCACTGCAACC | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRWSVVA*PQLTAT Trigger: GGTTGCAGTGAGCTGAGGTCATGCCACTACACTCCA...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGCCCCGGATGCCAATCTaGACCACACGCTTACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKPRMPI*TTRLQS Trigger: GGACTGTAAGCGTGTGGTGCAGATTGGCATCCGGGG...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAATCACGTTCAGGCCTTaGCAACCCCTGATGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGITFRP*QPLMIS Trigger: GGAGATCATCAGGGGTTGTCAAGGCCTGAACGTGAT...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGTTGCCTCCCATCTGCTaGCTGACTTCCCCCATCAGA | + |
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Preference number: 4 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKLPPIC*LTSPIR Trigger: TCTGATGGGGGAAGTCAGGCAGCAGATGGGAGGCAA...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTATTCAAGCAATGCCCCTaGCTCAGCTTCCTGAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVFKQCP*LSFLSS Trigger: GCTACTCAGGAAGCTGAGGCAGGGGCATTGCTTGAA...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGATGATCTCCAGAGCCTaGCTAGGAGTGAGACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKMISRA*LGVRPA Trigger: TGCTGGTCTCACTCCTAGTCAGGCTCTGGAGATCAT...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTAAATGAACCGAGATCATaGCATTGCACTCCAGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVNEPRS*HCTPAW Trigger: CCAGGCTGGAGTGCAATGGCATGATCTCGGTTCATT...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGGATATGTGATTGTGTaGTCTCCACCCAAGGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGGYVIV*SPPKVR Trigger: TCTGACCTTGGGTGGAGATCACACAATCACATATCC...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CCA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTAGGGATCCAAGGTCGTaGAAGAGCCCCGGATGCCAA | + |
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Preference number: 4 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFRDPRS*KSPGCQ Trigger: TTGGCATCCGGGGCTCTTCCACGACCTTGGATCCCT...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGCATTGCACTCCAGCCTaGGTGACAAGCAAAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRHCTPA*VTSKTL Trigger: TAGAGTTTTGCTTGTCACCCAGGCTGGAGTGCAATG...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGACTCATAAGTTCTTCTTaGGAACTTGTCAGCGACGCA | + |
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Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGLISSS*ELVSDA Trigger: TGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAG...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAACCCTTCTAGGCCTCTaGGCAAGAAGTTTCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGTLLGL*ARSFFI Trigger: AATGAAGAAACTTCTTGCTCAGAGGCCTAGAAGGGT...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGGTTGTAAAGATTaGCATTCACATCGCCTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGEGCKD*HSHRLG Trigger: ACCTAGGCGATGTGAATGTCAATCTTTACAACCTTC...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTAAAGATCATACGGTGGTaGAACTTCGACAAGATCACA | + |
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Preference number: 4 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVKIIRW*NFDKIT Trigger: TGTGATCTTGTCGAAGTTTCACCACCGTATGATCTT...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR GCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAAGGAATACAGCCAGCTaGTACAATTTTCTCATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGRNTAS*YNFLIG Trigger: GCCTATGAGAAAATTGTAGCAGCTGGCTGTATTCCT...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR GCA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGGTCCTAAAACCAAGATaGAGCCCTAAGCACCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKVLKPR*SPKHLI Trigger: TATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGAC...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR TCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGACGTCAATATCAAAGCTaGTATAAATGGGTTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGRQYQS*YKWVCL Trigger: GAGGCAAACCCATTTATATCAGCTTTGATATTGACG...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR TCA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGCAATCTGTTTTGTCTTaGAGAGCACAAGACTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKQSVLS*RAQDSD Trigger: GTCTGAGTCTTGTGCTCTTCAAGACAAAACAGATTG...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR GCA 90 bp | CTTACGTTCACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGATCACCACAGCATAACTaGAGATTTCAGGAATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTFTVVLKPRCSPKHLIGSPQHN*RFQELQ Trigger: CTGTAATTCCTGAAATCTGCAGTTATGCTGTGGTGA...TCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGTGAACGTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CCA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTAGACGGTTGTCACTTTaGGGAGAGCACATAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFRRLSL*GEHIAS Trigger: AGATGCTATGTGCTCTCCCCAAAGTGACAACCGTCT...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR TCA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTGCAATATGGGATATGTaGTTGTGTGATCTCCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFAIWDM*LCDLHP Trigger: TGGGTGGAGATCACACAATCACATATCCCATATTGC...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CCA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAGAAATGTTGCTGTTTaGGTGAGAATTCTACTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRRNVAV*VRILLI Trigger: AATCAGTAGAATTCTCACCCAAACAGCAACATTTCT...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| 3UTR CAA 72 bp | GATTTCAGGAATTACAGTCATAGAGGGTACATCAACTaGAAGAGTAGATTGAGTCTTACAGGAAGTGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: DFRNYSHRGYIN*KSRLSLTGSEL Trigger: TAACTCACTTCCTGTAAGACTCAATCTACTCTTCAAGTTGATGTACCCTCTATGACTGTAATTCCTGAAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| 3UTR CAA 72 bp | AATTATGGGGTAGCCCTTGCATTGCAAGATGATGATTaGATTATGGACACATTATCAACAGAATTGAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: NYGVALALQDDD*IMDTLSTELNL Trigger: CAAATTCAATTCTGTTGATAATGTGTCCATAATCAAATCATCATCTTGCAATGCAAGGGCTACCCCATAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CCA 90 bp | CCCGGAAGCCCTGGCTCCGGTTGTATCTGTAGGGATCCAAGGTCGTaGAAGAGCCCCGGATGCCAATCTGCACCACACGCTTACAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGSPGSGCICRDPRS*KSPGCQSAPHAYSP Trigger: TGGACTGTAAGCGTGTGGTGCAGATTGGCATCCGGGGCTCTTCCACGACCTTGGATCCCTACAGATACAACCGGAGCCAGGGCTTCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS GCA 90 bp | TCCGGTTGTATCTGTAGGGATCCAAGGTCGTGGAAGAGCCCCGGATaGCAATCTGCACCACACGCTTACAGTCCAGGAGACCCTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGCICRDPRSWKSPG*QSAPHAYSPGDPHP Trigger: TGGATGAGGGTCTCCTGGACTGTAAGCGTGTGGTGCAGATTGGCATCCGGGGCTCTTCCACGACCTTGGATCCCTACAGATACAACCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGCTCGCCCCAGGCCGGTaGGAGGTCCCAGTATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRLAPGR*EVPVSR Trigger: CCTGGATACTGGGACCTCCAACCGGCCTGGGGCGAG...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTCCAGCAGCCTCAGCATaGCCGCGCGCGGCCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFPAASA*PRAAKT Trigger: GGTCTTGGCCGCGCGCGGCAATGCTGAGGCTGCTGG...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGGCCCCCGTGCTAGGATaGACTGTCCCAAGCATCACT | + |
|
Preference number: 5 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRAPVLG*TVPSIT Trigger: AGTGATGCTTGGGACAGTCAATCCTAGCACGGGGGC...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTAACCGAGATCATGCCATaGCACTCCAGCCTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVTEIMP*HSSLGD Trigger: GTCACCCAGGCTGGAGTGCAATGGCATGATCTCGGT...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CCA 90 bp | AGCCTGACTAGGAGTGAGACCAGCAATTTCAGGTGTCCCTGTCCCTaGCGCATAGGCAGGATCCAGAGCGTCAATATCAAAGCTGATATA | + |
|
Preference number: 5 (lower is better) Translates to: SLTRSETSNFRCPCP*RIGRIQSVNIKADI Trigger: TATATCAGCTTTGATATTGACGCTCTGGATCCTGCCTATGCGCCAGGGACAGGGACACCTGAAATTGCTGGTCTCACTCCTAGTCAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS GCA 90 bp | TGTGATTGTGTGATCTCCACCCAAGGTCAGAGGAATACAGCCAGCTaGTACAATTTTCTCATAGGCCTCTTGAATTCGCCGGCAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CDCVISTQGQRNTAS*YNFLIGLLNSPAAV Trigger: GACAGCTGCCGGCGAATTCAAGAGGCCTATGAGAAAATTGTAGCAGCTGGCTGTATTCCTCTGACCTTGGGTGGAGATCACACAATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGTTTCTCATAGGCCTCTaGAATTCGCCGGCAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRFLIGL*NSPAAV Trigger: GACAGCTGCCGGCGAATTCAAGAGGCCTATGAGAAA...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTTTCTCTCCTAGGGCCTaGTCGGTCGTGTCCGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFFSPRA*SVVSVC Trigger: GCACACGGACACGACCGACAAGGCCCTAGGAGAGAA...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGCATCACGTTCAGGCCTaGACAACCCCTGATGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKHHVQA*TTPDDL Trigger: GAGATCATCAGGGGTTGTCAAGGCCTGAACGTGATG...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTAGGCAGGAGAATCGATaGAACTCGGGAGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFRQENR*NSGGGG Trigger: ACCTCCGCCTCCCGAGTTCAATCGATTCTCCTGCCT...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CTGCAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGGGGGTAGCCCTTGCATaGCAAGATGATGATTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LQRPRRSCSLKEDTQYSRGVALA*QDDDLI Trigger: AATCAAATCATCATCTTGCAATGCAAGGGCTACCCC...CCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTGCAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTACAAGACTCAGACGGTaGTCACTTTGGGGAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFTRLRR*SLWGEH Trigger: GTGCTCTCCCCAAAGTGACAACCGTCTGAGTCTTGT...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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| CDS-3UTR CAA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTAGCAATCTGTTTTGTCTaGAAGAGCACAAGACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVAICFV*KSTRLR Trigger: TCTGAGTCTTGTGCTCTTCAAGACAAAACAGATTGC...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGACTCATAAGTTCTTCTaGAGAACTTGTCAGCGACGC | + |
|
Preference number: 5 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKTHKFF*RTCQRR Trigger: GCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGT...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | AGACTGCTTACTCATAAGTTCTTCTTGAGAACTTGTCAGCGACGCAATCTGTTTCTGGGCCATGCTTTTTaGCCATCGCTTGCAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: RLLTHKFFLRTCQRRNLFLGHAF*PSLAIW Trigger: CCATATTGCAAGCGATGGCAAAAAAGCATGGCCCAG...AAACAGATTGCGTCGCTGACAAGTTCTCAAGAAGAACTTATGAGTAAGCAGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGAGTTTAGAAGACATTTaGTGTACCCTTCTAGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKSLEDI*CTLLGL Trigger: GAGGCCTAGAAGGGTACACAAAATGTCTTCTAAACT...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | ACAGTGGTCCTAAAACCAAGATGCAGCCCTAAGCACCTCATAGGAGAAGCTGTAAGAGGGTACATCAACTaGAAGAGTAGATTGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TVVLKPRCSPKHLIGEAVRGYIN*KSRLSL Trigger: AAGACTCAATCTACTCTTCAAGTTGATGTACCCTCT...TACAGCTTCTCCTATGAGGTGCTTAGGGCTGCATCTTGGTTTTAGGACCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGAACTTGAAGAGTAGATaGAGTCTTACAGGAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKNLKSR*SLTGSE Trigger: CTCACTTCCTGTAAGACTCAATCTACTCTTCAAGTT...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS-3UTR CAA 90 bp | CAGCGTCCGAGGAGGAGCTGTAGTTTAAAGGAAGATACTCAATACTCTAGGAAGTCAACAGAATTGAATTaGCATGGAACTCAAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: QRPRRSCSLKEDTQYSRKSTELN*HGTQDT Trigger: CGTGTCTTGAGTTCCATGCAAATTCAATTCTGTTGA...CTTCCTAGAGTATTGAGTATCTTCCTTTAAACTACAGCTCCTCCTCGGACGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS TCA 72 bp | GCGTCGGAAGCCTGGCGGCTCTGGCGGCGCCCCGGATaGAAGAGCCCTGCGGCAGGACGCGCGCCCACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ASEAWRLWRRPG*KSPAAGRAPTP Trigger: CGGCGTGGGCGCGCGTCCTGCCGCAGGGCTCTTTCATCCGGGGCGCCGCCAGAGCCGCCAGGCTTCCGACGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CCA 72 bp | GCCCCTCGGGGGAGGTCTGCACCGGCAGGCGCATCATaGAGCAGACGCCCACCGGCCGGGCCACGAACTCGG | + |
|
Preference number: 6 (lower is better) Translates to: APRGRSAPAGAS*SRRPPAGPRTR Trigger: CCGAGTTCGTGGCCCGGCCGGTGGGCGTCTGCTCCATGATGCGCCTGCCGGTGCAGACCTCCCCCGAGGGGC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS GCA 72 bp | AGCTTCTCTCCTAGGGCCTTGTCGGTCGTGTCCGTGTaGGCATCCACGTGCAGCAGCCCCACTGGGCCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SFSPRALSVVSV*ASTCSSPTGPC Trigger: GCATGGCCCAGTGGGGCTGCTGCACGTGGATGCGCACACGGACACGACCGACAAGGCCCTAGGAGAGAAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS TCA 72 bp | GGCCCCCGTGCTAGGATTGACTGTCCCAAGCATCACTaGTTCTTCCCGGATGCGGCGAGGTCCGAATCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GPRARIDCPKHH*FFPDAARSESR Trigger: GCGAGATTCGGACCTCGCCGCATCCGGGAAGAATCAGTGATGCTTGGGACAGTCAATCCTAGCACGGGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CAA 90 bp | TCTGCAACCATGAGGGACTGGAAGGGGAGGGCCCCCGTGCTAGGATaGACTGTCCCAAGCATCACTGATTCTTCCCGGATGCGGCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SATMRDWKGRAPVLG*TVPSITDSSRMRRG Trigger: ACCTCGCCGCATCCGGGAAGAATCAGTGATGCTTGGGACAGTCAATCCTAGCACGGGGGCCCTCCCCTTCCAGTCCCTCATGGTTGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS GCA 72 bp | GGATCCAAGGTCGTGGAAGAGCCCCGGATGCCAATCTaGACCACACGCTTACAGTCCAGGAGACCCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GSKVVEEPRMPI*TTRLQSRRPSS Trigger: GGATGAGGGTCTCCTGGACTGTAAGCGTGTGGTGCAGATTGGCATCCGGGGCTCTTCCACGACCTTGGATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CCA 72 bp | CCTGGCTCCGGTTGTATCTGTAGGGATCCAAGGTCGTaGAAGAGCCCCGGATGCCAATCTGCACCACACGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGSGCICRDPRS*KSPGCQSAPHA Trigger: AGCGTGTGGTGCAGATTGGCATCCGGGGCTCTTCCACGACCTTGGATCCCTACAGATACAACCGGAGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CCA 72 bp | ACATTCACATCGCCTAGGTCTGCAACCATGAGGGACTaGAAGGGGAGGGCCCCCGTGCTAGGATTGACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TFTSPRSATMRD*KGRAPVLGLTV Trigger: GACAGTCAATCCTAGCACGGGGGCCCTCCCCTTCCAGTCCCTCATGGTTGCAGACCTAGGCGATGTGAATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CAA 72 bp | ATGAGGGACTGGAAGGGGAGGGCCCCCGTGCTAGGATaGACTGTCCCAAGCATCACTGATTCTTCCCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: MRDWKGRAPVLG*TVPSITDSSRM Trigger: CATCCGGGAAGAATCAGTGATGCTTGGGACAGTCAATCCTAGCACGGGGGCCCTCCCCTTCCAGTCCCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS GCA 72 bp | ATCTGTAGGGATCCAAGGTCGTGGAAGAGCCCCGGATaGCAATCTGCACCACACGCTTACAGTCCAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ICRDPRSWKSPG*QSAPHAYSPGD Trigger: GTCTCCTGGACTGTAAGCGTGTGGTGCAGATTGGCATCCGGGGCTCTTCCACGACCTTGGATCCCTACAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CAA 72 bp | AACTTCGACAAGATCACAGCCCATCACGTTCAGGCCTaGACAACCCCTGATGATCTCCAGAGCCTGACTAGG | + |
|
Preference number: 6 (lower is better) Translates to: NFDKITAHHVQA*TTPDDLQSLTR Trigger: CCTAGTCAGGCTCTGGAGATCATCAGGGGTTGTCAAGGCCTGAACGTGATGGGCTGTGATCTTGTCGAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS TCA 72 bp | CAGCAGGGCTGTGTTCCCAGAAAGATCATACGGTGGTaGAACTTCGACAAGATCACAGCCCATCACGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QQGCVPRKIIRW*NFDKITAHHVQ Trigger: CTGAACGTGATGGGCTGTGATCTTGTCGAAGTTTCACCACCGTATGATCTTTCTGGGAACACAGCCCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CAA 90 bp | GGTCAGAGGAATACAGCCAGCTGCTACAATTTTCTCATAGGCCTCTaGAATTCGCCGGCAGCTGTCCTGAAGGTTGTAAAGATTGACATT | + |
|
Preference number: 6 (lower is better) Translates to: GQRNTASCYNFLIGL*NSPAAVLKVVKIDI Trigger: AATGTCAATCTTTACAACCTTCAGGACAGCTGCCGGCGAATTCAAGAGGCCTATGAGAAAATTGTAGCAGCTGGCTGTATTCCTCTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS TCA 72 bp | CTTGAGAACTTGTCAGCGACGCAATCTGTTTTGTCTTaGAGAGCACAAGACTCAGACGGTTGTCACTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LENLSATQSVLS*RAQDSDGCHFG Trigger: CCCAAAGTGACAACCGTCTGAGTCTTGTGCTCTTCAAGACAAAACAGATTGCGTCGCTGACAAGTTCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
||
| CDS CAA 72 bp | AATACAGCCAGCTGCTACAATTTTCTCATAGGCCTCTaGAATTCGCCGGCAGCTGTCCTGAAGGTTGTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NTASCYNFLIGL*NSPAAVLKVVK Trigger: CTTTACAACCTTCAGGACAGCTGCCGGCGAATTCAAGAGGCCTATGAGAAAATTGTAGCAGCTGGCTGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000375826.4 |
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