RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGBL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000084693

Ensembl transcript IDs: ENST00000323064.12, ENST00000360131.5, ENST00000421915.5, ENST00000437006.1, ENST00000441931.1, ENST00000451003.5, ENST00000453161.5, ENST00000477136.5, ENST00000487078.5, ENST00000489683.5

Found 524 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGGAGGGAAGGGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTaGTACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGA +
Preference number: 1 (lower is better)
Translates to: REGRGGRSLFCSVSR*YSVMPWTAWLAFQG
Trigger: TCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCCCTTCCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATaGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTA +
Preference number: 1 (lower is better)
Translates to: LGQRGWHSKDLTAVT*NQRPGGELAYFPLL
Trigger: TAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR CCA 90 bp GCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATCTTaGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCG +
Preference number: 1 (lower is better)
Translates to: AAWRGTSIFPTVTPS*GYILGLNIKALSDP
Trigger: CGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
3UTR-3UTR TCA 90 bp GTTACCCCATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCGTGGGGGCCTGGCCTaGGGCAGCCCTGGTGTAGCA +
Preference number: 2 (lower is better)
Translates to: VTPSWGYILGLNIKALSDRGGLA*GSPGVA
Trigger: TGCTACACCAGGGCTGCCTCAGGCCAGGCCCCCACG...GTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487078.5
3UTR-3UTR GCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATCCCAAAATCTTGTGCTaGGGAGGGAGGGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHPKILC*GGREGV
Trigger: CACCCCTTCCCTCCCTCCGCAGCACAAGATTTTGGG...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR CAA 90 bp AAATCTTGTGCTGCGGAGGGAGGGAAGGGGTGGCAGGTCCCTGTTTaGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTG +
Preference number: 2 (lower is better)
Translates to: KSCAAEGGKGWQVPV*FCLKVILCNALDSV
Trigger: CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCCCTTCCCTCCCTCCGCAGCACAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR CCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATATGCCTTGGACAGCGTaGCTGGCATTCCAAGGACTT +
Preference number: 2 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHMPWTA*LAFQGL
Trigger: AAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCAT...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR CCA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGCTTGGACAGCGTGGCTaGCATTCCAAGGACTTAACG +
Preference number: 2 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGELGQRG*HSKDLT
Trigger: CGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
3UTR-3UTR TCA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCTGTTCTGTCTCAAGGTaGTACTCTGTAATGCCTTGG +
Preference number: 2 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPCSVSR*YSVMPW
Trigger: CCAAGGCATTACAGAGTATCACCTTGAGACAGAACA...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR CCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAACTGTTACCCCATCTTaGGGCTATATCCTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: FCLKVILCNALDSVAGIPTVTPS*GYILGL
Trigger: CAAGCCCAGGATATAGCCCCAAGATGGGGTAACAGT...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR CCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCATACTCTGTAATGCCTTaGACAGCGTGGCTGGCATTC +
Preference number: 2 (lower is better)
Translates to: FCLKVILCNALDSVAGIPYSVMP*TAWLAF
Trigger: GAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTA...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR TCA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGTGTTCTGTCTCAAGGTaGTACTCTGTAATGCCTTGG +
Preference number: 2 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGECSVSR*YSVMPW
Trigger: CCAAGGCATTACAGAGTATCACCTTGAGACAGAACA...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
3UTR TCA 72 bp AGGGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTaGTACTCTGTAATGCCTTGGACAGCGTGGCTGGCA +
Preference number: 3 (lower is better)
Translates to: RGGRSLFCSVSR*YSVMPWTAWLA
Trigger: TGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR CCA 72 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATaGAATCAGCGGCCTGGAGGGGAACTAGCATATTTC +
Preference number: 3 (lower is better)
Translates to: RGWHSKDLTAVT*NQRPGGELAYF
Trigger: GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR CAA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCACTGTTACCCCATCTaGGGGCTATATCCTGGGCTT +
Preference number: 3 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQHCYPI*GLYPGL
Trigger: AAGCCCAGGATATAGCCCCAAGATGGGGTAACAGTG...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR CAA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATAAAACAAACCTCAGGTaGGCCCAAGGGACCCCTGCT +
Preference number: 3 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYKTNLR*AQGTPA
Trigger: AGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
3UTR CCA 72 bp CAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTaGAGGGGAACTAGCATATTTCCCACTGTTACCCCA +
Preference number: 3 (lower is better)
Translates to: QGLNGCHMESAA*RGTSIFPTVTP
Trigger: TGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR CAA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATATACTCTGTAATGCCTaGGACAGCGTGGCTGGCATT +
Preference number: 3 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYILCNA*DSVAGI
Trigger: AATGCCAGCCACGCTGTCCAAGGCATTACAGAGTAT...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR-3UTR CAA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATACTCTGTAATGCCTaGGACAGCGTGGCTGGCATT +
Preference number: 3 (lower is better)
Translates to: VLFCLKVILCNALDSVAGILCNA*DSVAGI
Trigger: AATGCCAGCCACGCTGTCCAAGGCATTACAGAGTAT...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
3UTR CCA 72 bp AGGGGAACTAGCATATTTCCCACTGTTACCCCATCTTaGGGCTATATCCTGGGCTTGAACATAAAGGCATTA +
Preference number: 3 (lower is better)
Translates to: RGTSIFPTVTPS*GYILGLNIKAL
Trigger: TAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAACAGTGGGAAATATGCTAGTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGGCTTCGGGGCTCTCTaGCGGGGCCCAGCACCCGGT +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELGFGAL*RGPAPG
Trigger: ACCGGGTGCTGGGCCCCGTCAGAGAGCCCCGAAGCC...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCTCTGCGAGTCGGCGGTaGGCCCCGGCCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPSASRR*APAQPG
Trigger: CCCAGGTTGGGCCGGGGCTCACCGCCGACTCGCAGA...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGCCGGGTGGGCAGTGTaGGCACAAAGGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGAGWAV*AQRGPC
Trigger: GCATGGCCCCCTTTGTGCGCACACTGCCCACCCGGC...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCTCTCTCCGGGCCGGTaGTCCCGCTCCCTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFLSPGR*SRSLSR
Trigger: GCGGGAGAGGGAGCGGGATCACCGGCCCGGAGAGAG...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATCTCTCTCCGGGCCGGTaGTCCCGCTCCCTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHLSPGR*SRSLSR
Trigger: GCGGGAGAGGGAGCGGGATCACCGGCCCGGAGAGAG...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp AAAACAAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGGCTTCGGGGCTCTCTaGCGGGGCCCAGCACCCGGT +
Preference number: 4 (lower is better)
Translates to: KTNLRLAQGTPAVTIPGWGFGAL*RGPAPG
Trigger: ACCGGGTGCTGGGCCCCGTCAGAGAGCCCCGAAGCC...CCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGTCTGCGAGTCGGCGGTaGGCCCCGGCCCAACCTGGG +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRSASRR*APAQPG
Trigger: CCCAGGTTGGGCCGGGGCTCACCGCCGACTCGCAGA...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGCGTGGGGGCCTGGCCTaGGGCAGCCCTGGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMRGGLA*GSPGVA
Trigger: TGCTACACCAGGGCTGCCTCAGGCCAGGCCCCCACG...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTCGTGGGGGCCTGGCCTaGGGCAGCCCTGGTGTAGCA +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTRGGLA*GSPGVA
Trigger: TGCTACACCAGGGCTGCCTCAGGCCAGGCCCCCACG...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGTGGGCCGGTCTCGAATaGGTTCCCAGCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMWAGLE*VPSVAG
Trigger: CCCGGCCACGCTGGGAACGCATTCGAGACCGGCCCA...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAAGGCGACGGAGGGTTTaGGCCCGGGGATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGRRRRV*ARGSSG
Trigger: ACCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCT...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGTTCCACAGTGTATCTaGAGGGGAAAGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGVPQCI*RGKPAG
Trigger: CCCCGCCGGCTTTCCCCTCCAGATACACTGTGGAAC...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTACTAGAGCCCAGGCCTaGCAGCCCTGCAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTTRAQA*QPCRPT
Trigger: AGTCGGCCTGCAGGGCTGCCAGGCCTGGGCTCTAGT...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGATGGTATCAGGGGCTaGCTCTTCAAGCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGDGIRG*LFKPRR
Trigger: TCTGCGGGGCTTGAAGAGTCAGCCCCTGATACCATC...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGGGAGCCCAGCTTGTGTaGGGAGGCTGGGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQGAQLV*GGWART
Trigger: AGTTCTGGCCCAGCCTCCTCACACAAGCTGGGCTCC...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGGCCGGGTGGGCAGTGTaGGCACAAAGGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGEAGWAV*AQRGPC
Trigger: GCATGGCCCCCTTTGTGCGCACACTGCCCACCCGGC...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCATGGGCCGGTCTCGAATaGGTTCCCAGCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPWAGLE*VPSVAG
Trigger: CCCGGCCACGCTGGGAACGCATTCGAGACCGGCCCA...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGAGCCTTTCATCCCTCTaGGAGTCGGCGGTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQSLSSL*ESAVSP
Trigger: GGGGCTCACCGCCGACTCGCAGAGGGATGAAAGGCT...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAAAGGGGGCCATGCCCTaGGAATACAGCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGKGAMP*EYSLLC
Trigger: GCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTT...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCAGGCGAAGAAGGTGGTaGCCCCACGGCCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFRRRRW*PHGPPR
Trigger: TCGTGGAGGGCCGTGGGGCCACCACCTTCTTCGCCT...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAAGGCGAAGAAGGTGGTaGCCCCACGGCCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPRRRRW*PHGPPR
Trigger: TCGTGGAGGGCCGTGGGGCCACCACCTTCTTCGCCT...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGAGGCGACGGAGGGTTTaGGCCCGGGGATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQRRRRV*ARGSSG
Trigger: ACCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCT...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTGCACGCCCATTGTCATaGCAGGCAGCAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: KPQVGPRDPCCNNSRMGSARPLS*QAAGML
Trigger: CAGCATCCCTGCTGCCTGCCATGACAATGGGCGTGC...ACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATACTAGAGCCCAGGCCTaGCAGCCCTGCAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHTRAQA*QPCRPT
Trigger: AGTCGGCCTGCAGGGCTGCCAGGCCTGGGCTCTAGT...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGTGCCGTCTCCTGTCCTaGCTTCGGGGCTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQCRLLS*LRGSLT
Trigger: CGTCAGAGAGCCCCGAAGCCAGGACAGGAGACGGCA...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCTGCCTGCAGGACGATaGTTCAGGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQLPAGR*FRGCCC
Trigger: GCAGCAGCAGCCCCTGAACCATCGTCCTGCAGGCAG...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAAGAACTAGTAGGAGCTaGGGATGGAGCGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGRTSRS*GWSEAA
Trigger: GGCAGCCTCGCTCCATCCCCAGCTCCTACTAGTTCT...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGACAGATTCACTCCACGTaGGTCTGTGCGGTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGQIHST*VCAVVS
Trigger: GGACACTACCGCACAGACTCACGTGGAGTGAATCTG...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGCCCCTCTTCTTGTTaGCACCCACATTCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGGPSSC*HPHSEC
Trigger: GCACTCTGAATGTGGGTGTCAACAAGAAGAGGGGCC...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp AAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTGCAGGCCGACTGCCATaGAAAGGAAAGCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: KPQVGPRDPCCNNSRMGSAGRLP*KGKLGE
Trigger: TTCCCCCAGCTTTCCTTTTCATGGCAGTCGGCCTGC...ACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATGGAGCCCAGCTTGTGTaGGGAGGCTGGGCCAGAACT +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHGAQLV*GGWART
Trigger: AGTTCTGGCCCAGCCTCCTCACACAAGCTGGGCTCC...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCGGGAAAGCATCCTCCTaGCCCGCTCTGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFGKASS*PALALR
Trigger: TCTCAGGGCCAGAGCGGGGCAGGAGGATGCTTTCCC...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGTGGTTCAGGGGCTGCTaGTGCCGTCTCCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRWFRGC*CRLLSW
Trigger: CCAGGACAGGAGACGGCAGCAGCAGCCCCTGAACCA...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTTGGTTCAGGGGCTGCTaGTGCCGTCTCCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFWFRGC*CRLLSW
Trigger: CCAGGACAGGAGACGGCAGCAGCAGCCCCTGAACCA...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCTGGAGCGAGGCTGCCTaGAGGACGATGGTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFWSEAA*RTMVQG
Trigger: CCCCTGAACCATCGTCCTGCAGGCAGCCTCGCTCCA...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATTGGAGCGAGGCTGCCTaGAGGACGATGGTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHWSEAA*RTMVQG
Trigger: CCCCTGAACCATCGTCCTGCAGGCAGCCTCGCTCCA...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCGGGATGGAGCGAGGCTaGCTGCAGGACGATGGTTCA +
Preference number: 4 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPGMERG*LQDDGS
Trigger: TGAACCATCGTCCTGCAGGCAGCCTCGCTCCATCCC...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAAGCCTTTCATCCCTCTaGGAGTCGGCGGTGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPSLSSL*ESAVSP
Trigger: GGGGCTCACCGCCGACTCGCAGAGGGATGAAAGGCT...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGCCGGGACCCCGCTCTaGCAGGAAACAAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMAGTPL*QETRSL
Trigger: GAGACTTCTTGTTTCCTGGCAGAGCGGGGTCCCGGC...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAATGCGTTCCCAGCGTaGCCGGGTGGGCAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPNAFPA*PGGQCA
Trigger: CGCACACTGCCCACCCGGCCACGCTGGGAACGCATT...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGAATGCGTTCCCAGCGTaGCCGGGTGGGCAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALNAFPA*PGGQCA
Trigger: CGCACACTGCCCACCCGGCCACGCTGGGAACGCATT...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATAGAAGGCGAAGAAGGTaGTGGCCCCACGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYRRRRR*WPHGPP
Trigger: TGGAGGGCCGTGGGGCCACCACCTTCTTCGCCTTCT...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTTCCAGGGGGCTGCTATaGGTAGGGTGGTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTSRGLL*VGWFSG
Trigger: TCCGGAGAACCACCCTACCCATAGCAGCCCCCTGGA...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTCCACAGTGTATCTaGAGGGGAAAGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTVPQCI*RGKPAG
Trigger: CCCCGCCGGCTTTCCCCTCCAGATACACTGTGGAAC...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCTGCCGTCTCCTGTCCTaGCTTCGGGGCTCTCTGACG +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFCRLLS*LRGSLT
Trigger: CGTCAGAGAGCCCCGAAGCCAGGACAGGAGACGGCA...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCTGCCTGCAGGACGATaGTTCAGGGGCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFLPAGR*FRGCCC
Trigger: GCAGCAGCAGCCCCTGAACCATCGTCCTGCAGGCAG...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATAGTAGGAGCTGGGGATaGAGCGAGGCTGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYSRSWG*SEAACR
Trigger: CCTGCAGGCAGCCTCGCTCCATCCCCAGCTCCTACT...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATAGTAGGAGCTGGGGATaGAGCGAGGCTGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHSRSWG*SEAACR
Trigger: CCTGCAGGCAGCCTCGCTCCATCCCCAGCTCCTACT...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGAACCTGGGCCTAGCCTaGGGAATCCGGGACCCCTCC +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALNLGLA*GIRDPS
Trigger: GGAGGGGTCCCGGATTCCCCAGGCTAGGCCCAGGTT...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCGGGAAAGCATCCTCCTaGCCCGCTCTGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGGKASS*PALALR
Trigger: TCTCAGGGCCAGAGCGGGGCAGGAGGATGCTTTCCC...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCAGGGGAAGAGGCAATaGCACTGGTCAGGGCTGACG +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFQGKRQ*HWSGLT
Trigger: CGTCAGCCCTGACCAGTGGCATTGCCTCTTCCCCTG...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGCGATGGTTCAGGGGCTaGTGCTGCCGTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALRWFRG*CCRLLS
Trigger: GGACAGGAGACGGCAGCAGCAGCCCCTGAACCATCG...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCCGATGGTTCAGGGGCTaGTGCTGCCGTCTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGRWFRG*CCRLLS
Trigger: GGACAGGAGACGGCAGCAGCAGCCCCTGAACCATCG...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp AAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTGGCCCAAGGGACCCCTaGTGTAACAATTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: KPQVGPRDPCCNNSRMGSGPRDP*CNNSRM
Trigger: CATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCC...ACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTCCCAAAATCTTGTGCTaGGGAGGGAGGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTPKILC*GGREGV
Trigger: CACCCCTTCCCTCCCTCCGCAGCACAAGATTTTGGG...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCCCAAAATCTTGTGCTaGGGAGGGAGGGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQPKILC*GGREGV
Trigger: CACCCCTTCCCTCCCTCCGCAGCACAAGATTTTGGG...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATCACAGCGCAGCTCCATaGTGGGGCTGGGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYHSAAP*WGWESI
Trigger: GATGCTTTCCCAGCCCCACCATGGAGCTGCGCTGTG...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGACTGTCATCTCAAAGGTaGGCCGGTCTCGAATGCGTT +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGLSSQR*AGLECV
Trigger: AACGCATTCGAGACCGGCCCACCTTTGAGATGACAG...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCAGAAGGCGAAGAAGGTaGTGGCCCCACGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGRRRRR*WPHGPP
Trigger: TGGAGGGCCGTGGGGCCACCACCTTCTTCGCCTTCT...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGTCCAGGGGGCTGCTATaGGTAGGGTGGTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRSRGLL*VGWFSG
Trigger: TCCGGAGAACCACCCTACCCATAGCAGCCCCCTGGA...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGATCTTCTCGAAGCCCATaGCAGGAAGTGATCGTCAGC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGSSRSP*QEVIVS
Trigger: GCTGACGATCACTTCCTGCCATGGGCTTCGAGAAGA...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATCTTTGGCCCCATAGATaGCCGGGTGCAGGACGGCAT +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYLWPHR*PGAGRH
Trigger: ATGCCGTCCTGCACCCGGCCATCTATGGGGCCAAAG...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGAGGGAGACAGGAACTaGGCTGGTGCTCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELEGDRN*AGAQRN
Trigger: GTTCCTCTGAGCACCAGCCCAGTTCCTGTCTCCCTC...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAGGGCCCAGCACCCGGTaGGTGACCTTTTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPGPSTR*VTFWVL
Trigger: TAGTACCCAAAAGGTCACCCACCGGGTGCTGGGCCC...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGGAGGGAGGGAAGGGGTaGCAGGTCCCTGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQEGGKG*QVPVLF
Trigger: GAACAAAACAGGGACCTGCCACCCCTTCCCTCCCTC...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAATCCGGGACCCCTCCTaGCGGAAACTCTCCTCGGAC +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPIRDPS*RKLSSD
Trigger: GTCCGAGGAGAGTTTCCGCCAGGAGGGGTCCCGGAT...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTCTCTCCGGGCCGGTaGTCCCGCTCCCTCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYLSPGR*SRSLSR
Trigger: GCGGGAGAGGGAGCGGGATCACCGGCCCGGAGAGAG...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGGATGGTATCAGGGGCTaGCTCTTCAAGCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRDGIRG*LFKPRR
Trigger: TCTGCGGGGCTTGAAGAGTCAGCCCCTGATACCATC...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAAGCTGTTTCCGTACATaGAGCAGCCCCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGSCFRT*SSPFWK
Trigger: CTTCCAAAAGGGGCTGCTTCATGTACGGAAACAGCT...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGGCCCCTCTTCTTGTTaGCACCCACATTCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELGPSSC*HPHSEC
Trigger: GCACTCTGAATGTGGGTGTCAACAAGAAGAGGGGCC...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATGCAGGCCGACTGCCATaGAAAGGAAAGCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYAGRLP*KGKLGE
Trigger: TTCCCCCAGCTTTCCTTTTCATGGCAGTCGGCCTGC...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTAGGGGATGTGGGGCCTaGAGAGCCTTTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFRGCGA*RAFHPS
Trigger: AGAGGGATGAAAGGCTCTTCAGGCCCCACATCCCCT...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp AAAACAAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGAGGGGATGTGGGGCCTaGAGAGCCTTTCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: KTNLRLAQGTPAVTIPGWRGCGA*RAFHPS
Trigger: AGAGGGATGAAAGGCTCTTCAGGCCCCACATCCCCT...CCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCTCTGCAATCGAGTCTTaGTGCAGGGCATCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPSAIES*CRASEL
Trigger: GAGCTCGGATGCCCTGCATCAAGACTCGATTGCAGA...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCAGGAACTGGGCTGGTaGTCAGAGGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFQELGW*SEELWE
Trigger: CTCCCAGAGTTCCTCTGAGCACCAGCCCAGTTCCTG...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCAGGCTTCAGCGTTATaGCTGTCAGCTGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQQASAL*LSAECP
Trigger: TGGGCACTCAGCTGACAGGCATAACGCTGAAGCCTG...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAGGCAGGCAGCAGGGATaGTGTTTACTGAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPGRQQG*CLLSVQ
Trigger: CTGGACGCTCAGTAAACAGCATCCCTGCTGCCTGCC...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTACACCCACATTCAGAGTaGTGCTTAGGCCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELHPHSE*CLGLGC
Trigger: ACAGCCGAGGCCTAAGCAGCACTCTGAATGTGGGTG...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCTTTGTTGGCTGCTGCTaGTACCACCGGCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPFVGCC*YHRHLC
Trigger: GCACAAGTGCCGGTGGTAGCAGCAGCAGCCAACAAA...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTGCCCTGCAGGCCGACTaGCATGAAAAGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFALQAD*HEKESW
Trigger: CCAGCTTTCCTTTTCATGGCAGTCGGCCTGCAGGGC...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCGGGATGGAGCGAGGCTaGCTGCAGGACGATGGTTCA +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGGMERG*LQDDGS
Trigger: TGAACCATCGTCCTGCAGGCAGCCTCGCTCCATCCC...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTGGTCCCAAAATCTTGTaGTGCGGAGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFGPKIL*CGGREG
Trigger: CCCTTCCCTCCCTCCGCAGCACAAGATTTTGGGACC...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAGGTCCCAAAATCTTGTaGTGCGGAGGGAGGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPGPKIL*CGGREG
Trigger: CCCTTCCCTCCCTCCGCAGCACAAGATTTTGGGACC...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCACACAGCGCAGCTCCATaGTGGGGCTGGGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPHSAAP*WGWESI
Trigger: GATGCTTTCCCAGCCCCACCATGGAGCTGCGCTGTG...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTCGTTTCAGCACAGTCTaGTCGGGTCCACACGTTGAA +
Preference number: 4 (lower is better)
Translates to: KPQVGPRDPCCNNSRMGSRFSTV*SGPHVE
Trigger: TTCAACGTGTGGACCCGACCAGACTGTGCTGAAACG...ACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGATTCTCCGGAAAGCGCTaGTCTAGCTGGTTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGFSGKR*SSWFSS
Trigger: ACTGCTAAACCAGCTAGACCAGCGCTTTCCGGAGAA...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGGCCTGCGAAACGGAATaGTCGAGGGGTGCTGGTATC +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRACETE*SRGAGI
Trigger: GATACCAGCACCCCTCGACCATTCCGTTTCGCAGGC...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp ATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGAAACAGTCAGTGGCTTTGGCCCCATAGATaGCCGGGTGCAGGACGGCAT +
Preference number: 4 (lower is better)
Translates to: ILGLNIKALSDPGRNSQWLWPHR*PGAGRH
Trigger: ATGCCGTCCTGCACCCGGCCATCTATGGGGCCAAAG...CCACTGACTGTTTCTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTGAGGGAGACAGGAACTaGGCTGGTGCTCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFEGDRN*AGAQRN
Trigger: GTTCCTCTGAGCACCAGCCCAGTTCCTGTCTCCCTC...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGGGCCCAGCACCCGGTaGGTGACCTTTTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALGPSTR*VTFWVL
Trigger: TAGTACCCAAAAGGTCACCCACCGGGTGCTGGGCCC...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGAGAACTAGTAGGAGCTaGGGATGGAGCGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRRTSRS*GWSEAA
Trigger: GGCAGCCTCGCTCCATCCCCAGCTCCTACTAGTTCT...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGATACTCTGTAATGCCTTaGACAGCGTGGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGYSVMP*TAWLAF
Trigger: GAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTA...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCTTCCTCCCCGGACGCTaGAGTAGAACCATGACCTGT +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFFLPGR*SRTMTC
Trigger: ACAGGTCATGGTTCTACTTCAGCGTCCGGGGAGGAA...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp AAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTTCAGGCTTCAGGTACTaGCGGTTCAGATTCACTCCA +
Preference number: 4 (lower is better)
Translates to: KPQVGPRDPCCNNSRMGSSGFRY*RFRFTP
Trigger: TGGAGTGAATCTGAACCGTCAGTACCTGAAGCCTGA...ACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCGTTATGCCTGTCAGCTaGGTGCCCACACTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFVMPVS*VPTLSF
Trigger: GAAGCTCAGTGTGGGCACTCAGCTGACAGGCATAAC...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGCTGTGGATTATCCCTaGGGCTTTGTAGATTGCAAC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGAVDYP*GFVDCN
Trigger: GTTGCAATCTACAAAGCCTCAGGGATAATCCACAGC...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAAGGGATGCTGTTTACTaGGCGTCCAGTGTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGRDAVY*ASSVVV
Trigger: AACTACAACACTGGACGCTCAGTAAACAGCATCCCT...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTAAGGCTGCTGTGCTCTaGCAGTACAATTCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFKAAVL*QYNSGP
Trigger: TGGCCCCGAATTGTACTGTCAGAGCACAGCAGCCTT...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCCCTGCAATCGAGTCTTaGTGCAGGGCATCCGAGCTC +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGPAIES*CRASEL
Trigger: GAGCTCGGATGCCCTGCATCAAGACTCGATTGCAGG...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360131.5
CDS-3UTR GCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGCACAAAGGGGGCCATaGCCTGGGAATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALAQRGP*PGNTAC
Trigger: GCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGC...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp AGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTCAGATAGACTACAGGATAGGCAGGCAGCAGGGATaGTGTTTACTGAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: RDPCCNNSRMGSQIDYRIGRQQG*CLLSVQ
Trigger: CTGGACGCTCAGTAAACAGCATCCCTGCTGCCTGCC...TATCCTGTAGTCTATCTGACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCACATTCAGAGTGCTaGTTAGGCCTCGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFPHSEC*LGLGCC
Trigger: GCAACAGCCGAGGCCTAAGCAGCACTCTGAATGTGG...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp AAAACAAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGCCACATTCAGAGTGCTaGTTAGGCCTCGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: KTNLRLAQGTPAVTIPGWPHSEC*LGLGCC
Trigger: GCAACAGCCGAGGCCTAAGCAGCACTCTGAATGTGG...CCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGTGCTAAAACTTCGTaGCCGACTCAAGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGGAKTS*PTQGVF
Trigger: GAAAACACCTTGAGTCGGGCACGAAGTTTTAGCACC...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp ATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGAAACAGTCAGTGGGCCCTGCAGGCCGACTaGCATGAAAAGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: ILGLNIKALSDPGRNSQWALQAD*HEKESW
Trigger: CCAGCTTTCCTTTTCATGGCAGTCGGCCTGCAGGGC...CCACTGACTGTTTCTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGGGCCCAAGGGACCCCTaGTGTAACAATTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRGPRDP*CNNSRM
Trigger: CATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCC...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGCTTGATGAGTTTTCCTaGCATTCCTCCCCGGACGCT +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMLDEFS*HSSPDA
Trigger: AGCGTCCGGGGAGGAATGCCAGGAAAACTCATCAAG...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp ATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGAAACAGTCAGTGGAAGGGGGCCATGCCCTaGGAATACAGCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ILGLNIKALSDPGRNSQWKGAMP*EYSLLC
Trigger: GCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTT...CCACTGACTGTTTCTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCTGTCATCTCAAAGGTaGGCCGGTCTCGAATGCGTT +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQLSSQR*AGLECV
Trigger: AACGCATTCGAGACCGGCCCACCTTTGAGATGACAG...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGAAGCGCTGGTCTAGCTaGTTTAGCAGTTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMKRWSS*FSSSWQ
Trigger: CTGCCAGGAACTGCTAAACCAGCTAGACCAGCGCTT...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGCTGCTATGGGTAGGGTaGTTCTCCGGAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALLLWVG*FSGKRW
Trigger: CCAGCGCTTTCCGGAGAACCACCCTACCCATAGCAG...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGCCTGCGAAACGGAATaGTCGAGGGGTGCTGGTATC +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALACETE*SRGAGI
Trigger: GATACCAGCACCCCTCGACCATTCCGTTTCGCAGGC...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCCTTCCCTCTTTAGACTaGCCATCTCTACGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPLPSLD*PSLRSR
Trigger: CCGAGACCGTAGAGATGGCCAGTCTAAAGAGGGAAG...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCACGCCCATTGTCATaGCAGGCAGCAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: VPVLFCLKVILCNALDSVARPLS*QAAGML
Trigger: CAGCATCCCTGCTGCCTGCCATGACAATGGGCGTGC...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGACCCATTGTGACTTTTaGGTGGAGTTCGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQTHCDF*VEFEGP
Trigger: GGGGCCTTCGAACTCCACCCAAAAGTCACAATGGGT...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCCGGTGGGTGACCTTTTaGGTACTAGAGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGRWVTF*VLEPRP
Trigger: AGGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCG...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATAAACAAACCTCAGGTTaGCCCAAGGGACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYKQTSG*PKGPLL
Trigger: CAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTT...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTAAACAAACCTCAGGTTaGCCCAAGGGACCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFKQTSG*PKGPLL
Trigger: CAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTT...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAGAGGGAGGGAAGGGGTaGCAGGTCCCTGTTTTGTTC +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPEGGKG*QVPVLF
Trigger: GAACAAAACAGGGACCTGCCACCCCTTCCCTCCCTC...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGAATCAAAGCGAGAACTaGACAGCAATCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMNQSEN*TAIPHS
Trigger: GCTGTGGGGGATTGCTGTTCAGTTCTCGCTTTGATT...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAGTCGGGTCCACACGTTaGATTCATAGTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPVGSTR*IHSQGK
Trigger: CTTCCCCTGACTATGAATTCAACGTGTGGACCCGAC...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp AAAACAAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGTCGGGTCCACACGTTaGATTCATAGTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: KTNLRLAQGTPAVTIPGWVGSTR*IHSQGK
Trigger: CTTCCCCTGACTATGAATTCAACGTGTGGACCCGAC...CCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGTTCCTCCCCGGACGCTaGAGTAGAACCATGACCTGT +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALFLPGR*SRTMTC
Trigger: ACAGGTCATGGTTCTACTTCAGCGTCCGGGGAGGAA...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGCTGAGTGCCCACACTaGGCTTCATTTTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMAECPH*ASFWRL
Trigger: CAATCTCCAAAATGAAGCTCAGTGTGGGCACTCAGC...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCGTTATGCCTGTCAGCTaGGTGCCCACACTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGVMPVS*VPTLSF
Trigger: GAAGCTCAGTGTGGGCACTCAGCTGACAGGCATAAC...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp AGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTCAGATAGACTACAGGATAAAGGCTGCTGTGCTCTaGCAGTACAATTCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: RDPCCNNSRMGSQIDYRIKAAVL*QYNSGP
Trigger: TGGCCCCGAATTGTACTGTCAGAGCACAGCAGCCTT...TATCCTGTAGTCTATCTGACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGACAGGCAACCCATTGTaGCTTTTGGGTGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMTGNPL*LLGGVR
Trigger: TCGAACTCCACCCAAAAGTCACAATGGGTTGCCTGT...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATTCCAGAGGACAAGAGTaGGCAACTGCTCCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHSRGQE*ATAPWY
Trigger: ATACCAGGGAGCAGTTGCTCACTCTTGTCCTCTGGA...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp ACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTTGGGCCGGTCTCGAATaGGTTCCCAGCGTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TNFIDSPLGPGPTVYLQAWAGLE*VPSVAG
Trigger: CCCGGCCACGCTGGGAACGCATTCGAGACCGGCCCA...AGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTATCAGGAAATAGCTaGTCTAGACGGGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTVSGNS*SRRGSR
Trigger: TCGAGAGCCCCGTCTAGAGCAGCTATTTCCTGATAC...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCGTATCAGGAAATAGCTaGTCTAGACGGGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPVSGNS*SRRGSR
Trigger: TCGAGAGCCCCGTCTAGAGCAGCTATTTCCTGATAC...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGGAATGGTCGAGGGGTaGTGGTATCAGGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELGMVEG*WYQEIA
Trigger: AGCTATTTCCTGATACCAGCACCCCTCGACCATTCC...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGAATATCCTCTTGCCTaGGAAACGGAATGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTEYPLA*ETEWSR
Trigger: CCTCGACCATTCCGTTTCGCAGGCAAGAGGATATTC...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATATCCTCTTGCCTaGGAAACGGAATGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMEYPLA*ETEWSR
Trigger: CCTCGACCATTCCGTTTCGCAGGCAAGAGGATATTC...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGCAGGAACTGGGCTGGTaGTCAGAGGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: VPVLFCLKVILCNALDSVQELGW*SEELWE
Trigger: CTCCCAGAGTTCCTCTGAGCACCAGCCCAGTTCCTG...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGTTGAGCTTCTGTTCTaGTGGCTCTGTTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGVELLF*WLCLFP
Trigger: TGGAAACAAACAGAGCCAGCAGAACAGAAGCTCAAC...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGTTAGGCCTCGGCTGTTaGGTACATGTTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMLGLGC*VHVSAS
Trigger: GGATGCTGAAACATGTACGCAACAGCCGAGGCCTAA...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGTTTGTTGGCTGCTGCTaGTACCACCGGCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGEFVGCC*YHRHLC
Trigger: GCACAAGTGCCGGTGGTAGCAGCAGCAGCCAACAAA...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGGAGAATTTTGTTGGCTaGTGCTGCTACCACCGGCAC +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRENFVG*CCYHRH
Trigger: GTGCCGGTGGTAGCAGCAGCAGCCAACAAAATTCTC...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATGAGAATTTTGTTGGCTaGTGCTGCTACCACCGGCAC +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYENFVG*CCYHRH
Trigger: GTGCCGGTGGTAGCAGCAGCAGCCAACAAAATTCTC...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGCCCAGTATAGGGGCTTaGTTTTCTACTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALPSIGA*FSTPSP
Trigger: GGGGGAGGGAGTAGAAAAGCAAGCCCCTATACTGGG...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGCCCAGTATAGGGGCTTaGTTTTCTACTCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGEPSIGA*FSTPSP
Trigger: GGGGGAGGGAGTAGAAAAGCAAGCCCCTATACTGGG...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGCGTTTCAGCACAGTCTaGTCGGGTCCACACGTTGAA +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRRFSTV*SGPHVE
Trigger: TTCAACGTGTGGACCCGACCAGACTGTGCTGAAACG...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATCTTGATGAGTTTTCCTaGCATTCCTCCCCGGACGCT +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYLDEFS*HSSPDA
Trigger: AGCGTCCGGGGAGGAATGCCAGGAAAACTCATCAAG...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATAAGCGCTGGTCTAGCTaGTTTAGCAGTTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYKRWSS*FSSSWQ
Trigger: CTGCCAGGAACTGCTAAACCAGCTAGACCAGCGCTT...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTACCCGATGGTAATAGATaGTATCCAGGGGGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELPDGNR*YPGGCY
Trigger: ATAGCAGCCCCCTGGATACCATCTATTACCATCGGG...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAAACAAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGTCTTCTCGAAGCCCATaGCAGGAAGTGATCGTCAGC +
Preference number: 4 (lower is better)
Translates to: KTNLRLAQGTPAVTIPGWSSRSP*QEVIVS
Trigger: GCTGACGATCACTTCCTGCCATGGGCTTCGAGAAGA...CCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGGAAGACAAAGCTAGATaGAGTCTCCCCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQEDKAR*SLPWVY
Trigger: GTACACCCAGGGGAGACTCCATCTAGCTTTGTCTTC...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGAGAAGCACAGCTTTaGCCCCATAGATGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPREAQL*PHRWPG
Trigger: ACCCGGCCATCTATGGGGCCAAAGCTGTGCTTCTCT...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATTGCTCAGAGGAACTCTaGGAGTTCAGACGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHCSEEL*EFRREC
Trigger: GCACTCTCGTCTGAACTCCCAGAGTTCCTCTGAGCA...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCCCCGCAGACTGTTGTaGCATAATCCACACACTGTT +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQPRRLL*HNPHTV
Trigger: AACAGTGTGTGGATTATGCCACAACAGTCTGCGGGG...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGAGAAATTGCAGCCCTaGAAGTCGAAGTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTEKLQP*KSKWAE
Trigger: TTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCTC...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTTCCCTCTTTAGACTaGCCATCTCTACGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPLPSLD*PSLRSR
Trigger: CCGAGACCGTAGAGATGGCCAGTCTAAAGAGGGAAG...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTACCCATTGTGACTTTTaGGTGGAGTTCGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFTHCDF*VEFEGP
Trigger: GGGGCCTTCGAACTCCACCCAAAAGTCACAATGGGT...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATCTTGGACAGCGTGGCTaGCATTCCAAGGACTTAACG +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYLGQRG*HSKDLT
Trigger: CGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCATGCCTTGGACAGCGTaGCTGGCATTCCAAGGACTT +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFMPWTA*LAFQGL
Trigger: AAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCAT...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAAGTCGAAGTGGGCTaGATTCAAGGAGATGAGCTT +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMEVEVG*IQGDEL
Trigger: AAGCTCATCTCCTTGAATTCAGCCCACTTCGACTTC...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATACAGGCAACCCATTGTaGCTTTTGGGTGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHTGNPL*LLGGVR
Trigger: TCGAACTCCACCCAAAAGTCACAATGGGTTGCCTGT...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp ATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGAAACAGTCAGTGGTCCAGAGGACAAGAGTaGGCAACTGCTCCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ILGLNIKALSDPGRNSQWSRGQE*ATAPWY
Trigger: ATACCAGGGAGCAGTTGCTCACTCTTGTCCTCTGGA...CCACTGACTGTTTCTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATCTTTCCCGATTACCATaGCAGCCTCTGGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYLSRLP*QPLVCL
Trigger: GAGACAAACCAGAGGCTGTCATGGTAATCGGGAAAG...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCGGGAAAGCATCCTCCTaGCCCGCTCTGGCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLGKASS*PALALR
Trigger: TCTCAGGGCCAGAGCGGGGCAGGAGGATGCTTTCCC...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp GTTACCCCATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACGCACAAAGGGGGCCATaGCCTGGGAATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: VTPSWGYILGLNIKALSDAQRGP*PGNTAC
Trigger: GCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGC...GTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTGCCGGGTGGGCAGTGTaGGCACAAAGGGGGCCATGC +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLAGWAV*AQRGPC
Trigger: GCATGGCCCCCTTTGTGCGCACACTGCCCACCCGGC...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCGGAATGGTCGAGGGGTaGTGGTATCAGGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFGMVEG*WYQEIA
Trigger: AGCTATTTCCTGATACCAGCACCCCTCGACCATTCC...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGCACCCACATTCAGAGTaGTGCTTAGGCCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: VPVLFCLKVILCNALDSVHPHSE*CLGLGC
Trigger: ACAGCCGAGGCCTAAGCAGCACTCTGAATGTGGGTG...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGGTGCTAAAACTTCGTaGCCGACTCAAGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMGAKTS*PTQGVF
Trigger: GAAAACACCTTGAGTCGGGCACGAAGTTTTAGCACC...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAAATTTTGTTGGCTGCTaGTGCTACCACCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPNFVGC*CYHRHL
Trigger: CAAGTGCCGGTGGTAGCAGCAGCAGCCAACAAAATT...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATTCCACCTTCTCCACGTaGGCTAGATTCCCTGAATCA +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHSTFST*ARFPES
Trigger: TGATTCAGGGAATCTAGCCCACGTGGAGAAGGTGGA...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATAGGCGAAGAAGGTGGTaGCCCCACGGCCCTCCACGA +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYRRRRW*PHGPPR
Trigger: TCGTGGAGGGCCGTGGGGCCACCACCTTCTTCGCCT...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp GTTACCCCATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCTGCTATGGGTAGGGTaGTTCTCCGGAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: VTPSWGYILGLNIKALSDLLWVG*FSGKRW
Trigger: CCAGCGCTTTCCGGAGAACCACCCTACCCATAGCAG...GTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATATGGTCGAGGGGTGCTaGTATCAGGAAATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHMVEGC*YQEIAA
Trigger: AGCAGCTATTTCCTGATACCAGCACCCCTCGACCAT...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTGAAGACAAAGCTAGATaGAGTCTCCCCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFEDKAR*SLPWVY
Trigger: GTACACCCAGGGGAGACTCCATCTAGCTTTGTCTTC...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGAGAGAAGCACAGCTTTaGCCCCATAGATGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: VPVLFCLKVILCNALDSVREAQL*PHRWPG
Trigger: ACCCGGCCATCTATGGGGCCAAAGCTGTGCTTCTCT...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATGAGCTTCTGTTCTGCTaGCTCTGTTTGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHELLFC*LCLFPG
Trigger: GCCTGGAAACAAACAGAGCCAGCAGAACAGAAGCTC...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTGAGCTTCTGTTCTGCTaGCTCTGTTTGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFELLFC*LCLFPG
Trigger: GCCTGGAAACAAACAGAGCCAGCAGAACAGAAGCTC...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGCCCCGCAGACTGTTGTaGCATAATCCACACACTGTT +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRPRRLL*HNPHTV
Trigger: AACAGTGTGTGGATTATGCCACAACAGTCTGCGGGG...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATCCCTGGAAGTCGAAGTaGGCTGAATTCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHPWKSK*AEFKEM
Trigger: CATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGG...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTTACCCCATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCGGTGGGTGACCTTTTaGGTACTAGAGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: VTPSWGYILGLNIKALSDRWVTF*VLEPRP
Trigger: AGGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCG...GTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTTACCATGACAGCCTCTaGTTTGTCTCCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTYHDSL*FVSRGQ
Trigger: TTGTCCTCTGGAGACAAACCAGAGGCTGTCATGGTA...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAATGGAATCAGCGGCCTaGAGGGGAACTAGCATATTT +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELMESAA*RGTSIF
Trigger: AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCAT...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCCTTGGACAGCGTGGCTaGCATTCCAAGGACTTAACG +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGLGQRG*HSKDLT
Trigger: CGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCTCAGGCTTCAGGTACTaGCGGTTCAGATTCACTCCA +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGSGFRY*RFRFTP
Trigger: TGGAGTGAATCTGAACCGTCAGTACCTGAAGCCTGA...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAGCTGAGTGCCCACACTaGGCTTCATTTTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPAECPH*ASFWRL
Trigger: CAATCTCCAAAATGAAGCTCAGTGTGGGCACTCAGC...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGAGCTGTTTCCGTACATaGAGCAGCCCCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALSCFRT*SSPFWK
Trigger: CTTCCAAAAGGGGCTGCTTCATGTACGGAAACAGCT...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGGAAGTCGAAGTGGGCTaGATTCAAGGAGATGAGCTT +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPREVEVG*IQGDEL
Trigger: AAGCTCATCTCCTTGAATTCAGCCCACTTCGACTTC...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAGCTGTGGATTATCCCTaGGGCTTTGTAGATTGCAAC +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPAVDYP*GFVDCN
Trigger: GTTGCAATCTACAAAGCCTCAGGGATAATCCACAGC...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTAGACTGGCTTACCTCTaGCGGGGCCCAGCACCCGGT +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLRLAYL*RGPAPG
Trigger: ACCGGGTGCTGGGCCCCGTCAGAGGTAAGCCAGTCT...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATTGCTCCCTGGTATGTTaGATGAATCAGGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHCSLVC*MNQAVD
Trigger: GTCTACTGCCTGATTCATTCAACATACCAGGGAGCA...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGCTTTCCCGATTACCATaGCAGCCTCTGGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALLSRLP*QPLVCL
Trigger: GAGACAAACCAGAGGCTGTCATGGTAATCGGGAAAG...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCCAGGGGAAGAGGCAATaGCACTGGTCAGGGCTGACG +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLQGKRQ*HWSGLT
Trigger: CGTCAGCCCTGACCAGTGGCATTGCCTCTTCCCCTG...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGAGAAGAATATCCTCTTaGCTGCGAAACGGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQRRISS*LRNGMV
Trigger: GACCATTCCGTTTCGCAGGCAAGAGGATATTCTTCT...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGTTAGGCCTCGGCTGTTaGGTACATGTTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGELGLGC*VHVSAS
Trigger: GGATGCTGAAACATGTACGCAACAGCCGAGGCCTAA...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp AGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTCAGATAGACTACAGGATAAATTTTGTTGGCTGCTaGTGCTACCACCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: RDPCCNNSRMGSQIDYRINFVGC*CYHRHL
Trigger: CAAGTGCCGGTGGTAGCAGCAGCAGCCAACAAAATT...TATCCTGTAGTCTATCTGACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAAATGCGTTCCCAGCGTaGCCGGGTGGGCAGTGTGCG +
Preference number: 4 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQNAFPA*PGGQCA
Trigger: CGCACACTGCCCACCCGGCCACGCTGGGAACGCATT...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCAGAAGGCGAAGAAGGTaGTGGCCCCACGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIRRRRR*WPHGPP
Trigger: TGGAGGGCCGTGGGGCCACCACCTTCTTCGCCTTCT...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGATGGTCGAGGGGTGCTaGTATCAGGAAATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALMVEGC*YQEIAA
Trigger: AGCAGCTATTTCCTGATACCAGCACCCCTCGACCAT...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTAGCATGTTTTCCACCTaGGTGCTCTCATCACTAAAG +
Preference number: 4 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTSMFST*VLSSLK
Trigger: CTTTAGTGATGAGAGCACCCAGGTGGAAAACATGCT...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGCCCTGGAAGTCGAAGTaGGCTGAATTCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALPWKSK*AEFKEM
Trigger: CATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGG...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCGAGAAATTGCAGCCCTaGAAGTCGAAGTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGEKLQP*KSKWAE
Trigger: TTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCTC...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATATTGTGACTTTTGGGTaGAGTTCGAAGGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYIVTFG*SSKAPL
Trigger: AAGAGGGGCCTTCGAACTCCACCCAAAAGTCACAAT...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCATGTGGAGAATTTTGTTaGCTGCTGCTGCTACCACCG +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPCGEFC*LLLLPP
Trigger: CGGTGGTAGCAGCAGCAGCCAACAAAATTCTCCACA...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTCAGATAGACTACAGGATATGTGGAGAATTTTGTTaGCTGCTGCTGCTACCACCG +
Preference number: 4 (lower is better)
Translates to: RDPCCNNSRMGSQIDYRICGEFC*LLLLPP
Trigger: CGGTGGTAGCAGCAGCAGCCAACAAAATTCTCCACA...TATCCTGTAGTCTATCTGACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCACTAGAGCCCAGGCCTaGCAGCCCTGCAGGCCGACT +
Preference number: 4 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFTRAQA*QPCRPT
Trigger: AGTCGGCCTGCAGGGCTGCCAGGCCTGGGCTCTAGT...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAGGGGCTCCCAGACTaGCTTACCTCTGACGGGGCC +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLQGLPD*LTSDGA
Trigger: GGCCCCGTCAGAGGTAAGCCAGTCTGGGAGCCCCTG...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCTACCATGACAGCCTCTaGTTTGTCTCCAGAGGACAA +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFYHDSL*FVSRGQ
Trigger: TTGTCCTCTGGAGACAAACCAGAGGCTGTCATGGTA...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCACTGTTACCCCATCTTaGGGCTATATCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGTVTPS*GYILGL
Trigger: CAAGCCCAGGATATAGCCCCAAGATGGGGTAACAGT...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGGCTGAAGTAGAACCATaGCCTGTTCCCATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRAEVEP*PVPILK
Trigger: TTTGAGAATGGGAACAGGTCATGGTTCTACTTCAGC...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGCCCTCCACGAAACGATaGACAAAGGATAACACAAAC +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRPSTKR*TKDNTN
Trigger: GTTTGTGTTATCCTTTGTTCATCGTTTCGTGGAGGG...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCTCCACGAAACGATaGACAAAGGATAACACAAAC +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFPSTKR*TKDNTN
Trigger: GTTTGTGTTATCCTTTGTTCATCGTTTCGTGGAGGG...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGTGCTCCCTGGTATGTTaGATGAATCAGGCAGTAGAC +
Preference number: 4 (lower is better)
Translates to: GWQVPVLFCLKVILCNALCSLVC*MNQAVD
Trigger: GTCTACTGCCTGATTCATTCAACATACCAGGGAGCA...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTTGTTCTGTCTCAAGGTaGTACTCTGTAATGCCTTGG +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFCSVSR*YSVMPW
Trigger: CCAAGGCATTACAGAGTATCACCTTGAGACAGAACA...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATAGAAGAATATCCTCTTaGCTGCGAAACGGAATGGTC +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYRRISS*LRNGMV
Trigger: GACCATTCCGTTTCGCAGGCAAGAGGATATTCTTCT...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCGGCAGGCAGCAGGGATaGTGTTTACTGAGCGTCCAG +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLGRQQG*CLLSVQ
Trigger: CTGGACGCTCAGTAAACAGCATCCCTGCTGCCTGCC...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp ATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGAAACAGTCAGTGGATAGCTCGTCCCACCTaGTCAAATAGTTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ILGLNIKALSDPGRNSQWIARPT*SNSSTV
Trigger: CACTGTGGAACTATTTGAGCAGGTGGGACGAGCTAT...CCACTGACTGTTTCTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTAGTAAGGCTGCTGTaGTCTGACAGTACAATTCGG +
Preference number: 4 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYLVRLL*SDSTIR
Trigger: CCGAATTGTACTGTCAGAGCACAGCAGCCTTACTAA...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGAGGCGACGGAGGGTTTaGGCCCGGGGATCATCAGGT +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKRRRRV*ARGSSG
Trigger: ACCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCT...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATCTTTGGCCCCATAGATaGCCGGGTGCAGGACGGCAT +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYLWPHR*PGAGRH
Trigger: ATGCCGTCCTGCACCCGGCCATCTATGGGGCCAAAG...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp GTTACCCCATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACTGCTCAGAGGAACTCTaGGAGTTCAGACGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: VTPSWGYILGLNIKALSDCSEEL*EFRREC
Trigger: GCACTCTCGTCTGAACTCCCAGAGTTCCTCTGAGCA...GTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp ACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTGCACGCCCATTGTCATaGCAGGCAGCAGGGATGCTG +
Preference number: 4 (lower is better)
Translates to: TNFIDSPLGPGPTVYLQAARPLS*QAAGML
Trigger: CAGCATCCCTGCTGCCTGCCATGACAATGGGCGTGC...AGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp ACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTGTTCCACAGTGTATCTaGAGGGGAAAGCCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TNFIDSPLGPGPTVYLQAVPQCI*RGKPAG
Trigger: CCCCGCCGGCTTTCCCCTCCAGATACACTGTGGAAC...AGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGCATGAAAAGGAAAGCTaGGGGAATTCTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMHEKES*GNSSSV
Trigger: CACAGATGAAGAATTCCCCCAGCTTTCCTTTTCATG...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTCAGATAGACTACAGGATAATGGAATCAGCGGCCTaGAGGGGAACTAGCATATTT +
Preference number: 4 (lower is better)
Translates to: RDPCCNNSRMGSQIDYRIMESAA*RGTSIF
Trigger: AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCAT...TATCCTGTAGTCTATCTGACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGTACTCTGTAATGCCTTaGACAGCGTGGCTGGCATTC +
Preference number: 4 (lower is better)
Translates to: VPVLFCLKVILCNALDSVYSVMP*TAWLAF
Trigger: GAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTA...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGGCTGAAGTAGAACCATaGCCTGTTCCCATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGEAEVEP*PVPILK
Trigger: TTTGAGAATGGGAACAGGTCATGGTTCTACTTCAGC...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCGTTATGCCTGTCAGCTaGGTGCCCACACTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLVMPVS*VPTLSF
Trigger: GAAGCTCAGTGTGGGCACTCAGCTGACAGGCATAAC...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATGATGGTATCAGGGGCTaGCTCTTCAAGCCCCGCAGA +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYDGIRG*LFKPRR
Trigger: TCTGCGGGGCTTGAAGAGTCAGCCCCTGATACCATC...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAAAGGATAACACAAACTaGGTCTCTGTCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELKDNTN*VSVISK
Trigger: CTTTGAGATGACAGAGACGCAGTTTGTGTTATCCTT...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp ACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCAGGAACTGGGCTGGTaGTCAGAGGAACTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TNFIDSPLGPGPTVYLQAQELGW*SEELWE
Trigger: CTCCCAGAGTTCCTCTGAGCACCAGCCCAGTTCCTG...AGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGGTTGAGCTTCTGTTCTaGTGGCTCTGTTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGEVELLF*WLCLFP
Trigger: TGGAAACAAACAGAGCCAGCAGAACAGAAGCTCAAC...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR GCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCTCTTCTCTGAGAAATTaGAGCCCTGGAAGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGSSLRN*SPGSRS
Trigger: ACTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGA...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCATCTTCTCTGAGAAATTaGAGCCCTGGAAGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: FCLKVILCNALDSVAGIPSSLRN*SPGSRS
Trigger: ACTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGA...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGGTCCAGTGTTGTAGTTaGATTCAAGTGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRVQCCS*IQVCSC
Trigger: ACAGCTACACACTTGAATGCAACTACAACACTGGAC...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGATAGCTCGTCCCACCTaGTCAAATAGTTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: VPVLFCLKVILCNALDSVIARPT*SNSSTV
Trigger: CACTGTGGAACTATTTGAGCAGGTGGGACGAGCTAT...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCTTAGTAAGGCTGCTGTaGTCTGACAGTACAATTCGG +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGLVRLL*SDSTIR
Trigger: CCGAATTGTACTGTCAGAGCACAGCAGCCTTACTAA...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCACAGCGCAGCTCCATaGTGGGGCTGGGAAAGCATC +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKHSAAP*WGWESI
Trigger: GATGCTTTCCCAGCCCCACCATGGAGCTGCGCTGTG...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCAAGGGGGCCATGCCCTaGGAATACAGCTTGCTCTGC +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIKGAMP*EYSLLC
Trigger: GCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTT...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp GTTACCCCATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACTTCTCCGGAAAGCGCTaGTCTAGCTGGTTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: VTPSWGYILGLNIKALSDFSGKR*SSWFSS
Trigger: ACTGCTAAACCAGCTAGACCAGCGCTTTCCGGAGAA...GTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCCTGCTATGGGTAGGGTaGTTCTCCGGAAAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYILLWVG*FSGKRW
Trigger: CCAGCGCTTTCCGGAGAACCACCCTACCCATAGCAG...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGTCCAGGGGGCTGCTATaGGTAGGGTGGTTCTCCGGA +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKSRGLL*VGWFSG
Trigger: TCCGGAGAACCACCCTACCCATAGCAGCCCCCTGGA...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATGAGGGAGACAGGAACTaGGCTGGTGCTCAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYEGDRN*AGAQRN
Trigger: GTTCCTCTGAGCACCAGCCCAGTTCCTGTCTCCCTC...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCAGCATGTTTTCCACCTaGGTGCTCTCATCACTAAAG +
Preference number: 4 (lower is better)
Translates to: VLFCLKVILCNALDSVAGSMFST*VLSSLK
Trigger: CTTTAGTGATGAGAGCACCCAGGTGGAAAACATGCT...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGATTGTGACTTTTGGGTaGAGTTCGAAGGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: VPVLFCLKVILCNALDSVIVTFG*SSKAPL
Trigger: AAGAGGGGCCTTCGAACTCCACCCAAAAGTCACAAT...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGGAATTCTTCATCTGTaGAGAATTTTGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELGILHL*RILLAA
Trigger: AGCAGCCAACAAAATTCTCCACAGATGAAGAATTCC...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCATGAAAAGGAAAGCTaGGGGAATTCTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFHEKES*GNSSSV
Trigger: CACAGATGAAGAATTCCCCCAGCTTTCCTTTTCATG...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGGGGCCCAGCACCCGGTaGGTGACCTTTTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKGPSTR*VTFWVL
Trigger: TAGTACCCAAAAGGTCACCCACCGGGTGCTGGGCCC...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCCTCCCCGGACGCTaGAGTAGAACCATGACCTGT +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIFLPGR*SRTMTC
Trigger: ACAGGTCATGGTTCTACTTCAGCGTCCGGGGAGGAA...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCCAGATTCACTCCACGTaGGTCTGTGCGGTAGTGTCC +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIQIHST*VCAVVS
Trigger: GGACACTACCGCACAGACTCACGTGGAGTGAATCTG...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATCTGAATTCAAGGAGATaGGCTTTGGATATAGCATGT +
Preference number: 4 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHLNSRR*ALDIAC
Trigger: ACATGCTATATCCAAAGCTCATCTCCTTGAATTCAG...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR TCA 90 bp GTTACCCCATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACAGGGATGCTGTTTACTaGGCGTCCAGTGTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VTPSWGYILGLNIKALSDRDAVY*ASSVVV
Trigger: AACTACAACACTGGACGCTCAGTAAACAGCATCCCT...GTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGATGGGGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp ACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTGGCCCCTCTTCTTGTTaGCACCCACATTCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: TNFIDSPLGPGPTVYLQAGPSSC*HPHSEC
Trigger: GCACTCTGAATGTGGGTGTCAACAAGAAGAGGGGCC...AGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGGCAGGCCGACTGCCATaGAAAGGAAAGCTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKAGRLP*KGKLGE
Trigger: TTCCCCCAGCTTTCCTTTTCATGGCAGTCGGCCTGC...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATACAGCTTGCTCTaGTTGTTCATGTTCATAATG +
Preference number: 4 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMEYSLL*LFMFIM
Trigger: CATTATGAACATGAACAAGCAGAGCAAGCTGTATTC...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCGAATACAGCTTGCTCTaGTTGTTCATGTTCATAATG +
Preference number: 4 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPEYSLL*LFMFIM
Trigger: CATTATGAACATGAACAAGCAGAGCAAGCTGTATTC...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCACAAAGGGGGCCATaGCCTGGGAATACAGCTTGC +
Preference number: 4 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQAQRGP*PGNTAC
Trigger: GCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGC...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTAAGGATAACACAAACTaGGTCTCTGTCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFKDNTN*VSVISK
Trigger: CTTTGAGATGACAGAGACGCAGTTTGTGTTATCCTT...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGGGTGTACTCTACTaGTTAAGAAGAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPLGVLY*LRRISS
Trigger: AGAGGATATTCTTCTTAAGCAGTAGAGTACACCCAG...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCTGGGTGTACTCTACTaGTTAAGAAGAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFLGVLY*LRRISS
Trigger: AGAGGATATTCTTCTTAAGCAGTAGAGTACACCCAG...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR GCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCCACATTCAGAGTGCTaGTTAGGCCTCGGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYPHSEC*LGLGCC
Trigger: GCAACAGCCGAGGCCTAAGCAGCACTCTGAATGTGG...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCGCCCTGCAGGCCGACTaGCATGAAAAGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFALQAD*HEKESW
Trigger: CCAGCTTTCCTTTTCATGGCAGTCGGCCTGCAGGGC...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCCAACCGAACACATGTTaGAGGGGCTCCCAGACTGGC +
Preference number: 4 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFQPNTC*RGSQTG
Trigger: GCCAGTCTGGGAGCCCCTGCAACATGTGTTCGGTTG...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCCGTTTCAGCACAGTCTaGTCGGGTCCACACGTTGAA +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLRFSTV*SGPHVE
Trigger: TTCAACGTGTGGACCCGACCAGACTGTGCTGAAACG...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCAAGCGCTGGTCTAGCTaGTTTAGCAGTTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLKRWSS*FSSSWQ
Trigger: CTGCCAGGAACTGCTAAACCAGCTAGACCAGCGCTT...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCGCCTGCGAAACGGAATaGTCGAGGGGTGCTGGTATC +
Preference number: 4 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFACETE*SRGAGI
Trigger: GATACCAGCACCCCTCGACCATTCCGTTTCGCAGGC...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGGGAATTCTTCATCTGTaGAGAATTTTGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CLKVILCNALDSVAGIPRGILHL*RILLAA
Trigger: AGCAGCCAACAAAATTCTCCACAGATGAAGAATTCC...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCGGTGGGTGACCTTTTaGGTACTAGAGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKRWVTF*VLEPRP
Trigger: AGGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCG...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATGTCGGGTCCACACGTTaGATTCATAGTCAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYVGSTR*IHSQGK
Trigger: CTTCCCCTGACTATGAATTCAACGTGTGGACCCGAC...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp AGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTCAGATAGACTACAGGATACTGAATTCAAGGAGATaGGCTTTGGATATAGCATGT +
Preference number: 4 (lower is better)
Translates to: RDPCCNNSRMGSQIDYRILNSRR*ALDIAC
Trigger: ACATGCTATATCCAAAGCTCATCTCCTTGAATTCAG...TATCCTGTAGTCTATCTGACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR TCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTAAGGCTGCTGTGCTCTaGCAGTACAATTCGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLKAAVL*QYNSGP
Trigger: TGGCCCCGAATTGTACTGTCAGAGCACAGCAGCCTT...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAGGCTTCAGCGTTATaGCTGTCAGCTGAGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLQASAL*LSAECP
Trigger: TGGGCACTCAGCTGACAGGCATAACGCTGAAGCCTG...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCACCCACATTCAGAGTaGTGCTTAGGCCTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKHPHSE*CLGLGC
Trigger: ACAGCCGAGGCCTAAGCAGCACTCTGAATGTGGGTG...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGTTTGTTGGCTGCTGCTaGTACCACCGGCACTTGTGC +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKFVGCC*YHRHLC
Trigger: GCACAAGTGCCGGTGGTAGCAGCAGCAGCCAACAAA...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATTACTTCCCCCAGCAATaGCCCAGACAACCGAACACA +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYYFPQQ*PRQPNT
Trigger: TGTGTTCGGTTGTCTGGGGCATTGCTGGGGGAAGTA...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTGATGAGTTTTCCTaGCATTCCTCCCCGGACGCT +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYLDEFS*HSSPDA
Trigger: AGCGTCCGGGGAGGAATGCCAGGAAAACTCATCAAG...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCATGGTCGAGGGGTGCTaGTATCAGGAAATAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLMVEGC*YQEIAA
Trigger: AGCAGCTATTTCCTGATACCAGCACCCCTCGACCAT...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCGAAGACAAAGCTAGATaGAGTCTCCCCTGGGTGTAC +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLEDKAR*SLPWVY
Trigger: GTACACCCAGGGGAGACTCCATCTAGCTTTGTCTTC...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGAGAGAAGCACAGCTTTaGCCCCATAGATGGCCGGGT +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKREAQL*PHRWPG
Trigger: ACCCGGCCATCTATGGGGCCAAAGCTGTGCTTCTCT...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATTGCTCAGAGGAACTCTaGGAGTTCAGACGAGAGTGC +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYCSEEL*EFRREC
Trigger: GCACTCTCGTCTGAACTCCCAGAGTTCCTCTGAGCA...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATACCCATTGTGACTTTTaGGTGGAGTTCGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYTHCDF*VEFEGP
Trigger: GGGGCCTTCGAACTCCACCCAAAAGTCACAATGGGT...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCAATCAAAGCGAGAACTaGACAGCAATCCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYINQSEN*TAIPHS
Trigger: GCTGTGGGGGATTGCTGTTCAGTTCTCGCTTTGATT...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATTCAGGCTTCAGGTACTaGCGGTTCAGATTCACTCCA +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYSGFRY*RFRFTP
Trigger: TGGAGTGAATCTGAACCGTCAGTACCTGAAGCCTGA...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATAGCTGTTTCCGTACATaGAGCAGCCCCTTTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYSCFRT*SSPFWK
Trigger: CTTCCAAAAGGGGCTGCTTCATGTACGGAAACAGCT...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCAGGGATGCTGTTTACTaGGCGTCCAGTGTTGTAGTT +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLRDAVY*ASSVVV
Trigger: AACTACAACACTGGACGCTCAGTAAACAGCATCCCT...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATACAGGCAACCCATTGTaGCTTTTGGGTGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYTGNPL*LLGGVR
Trigger: TCGAACTCCACCCAAAAGTCACAATGGGTTGCCTGT...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATGGAATGGTCGAGGGGTaGTGGTATCAGGAAATAGCT +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYGMVEG*WYQEIA
Trigger: AGCTATTTCCTGATACCAGCACCCCTCGACCATTCC...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATAATTTTGTTGGCTGCTaGTGCTACCACCGGCACTTG +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYNFVGC*CYHRHL
Trigger: CAAGTGCCGGTGGTAGCAGCAGCAGCCAACAAAATT...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGAGAATTTTGTTGGCTaGTGCTGCTACCACCGGCAC +
Preference number: 4 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQENFVG*CCYHRH
Trigger: GTGCCGGTGGTAGCAGCAGCAGCCAACAAAATTCTC...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAACTGTCATCTCAAAGGTaGGCCGGTCTCGAATGCGTT +
Preference number: 4 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQLSSQR*AGLECV
Trigger: AACGCATTCGAGACCGGCCCACCTTTGAGATGACAG...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATTTCTCCGGAAAGCGCTaGTCTAGCTGGTTTAGCAGT +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYFSGKR*SSWFSS
Trigger: ACTGCTAAACCAGCTAGACCAGCGCTTTCCGGAGAA...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAATCTTCTCGAAGCCCATaGCAGGAAGTGATCGTCAGC +
Preference number: 4 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQSSRSP*QEVIVS
Trigger: GCTGACGATCACTTCCTGCCATGGGCTTCGAGAAGA...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCGAGCTTCTGTTCTGCTaGCTCTGTTTGTTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIELLFC*LCLFPG
Trigger: GCCTGGAAACAAACAGAGCCAGCAGAACAGAAGCTC...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCCCCGCAGACTGTTGTaGCATAATCCACACACTGTT +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYPRRLL*HNPHTV
Trigger: AACAGTGTGTGGATTATGCCACAACAGTCTGCGGGG...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCCTTCCCTCTTTAGACTaGCCATCTCTACGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFLPSLD*PSLRSR
Trigger: CCGAGACCGTAGAGATGGCCAGTCTAAAGAGGGAAG...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTGCTGAGTGCCCACACTaGGCTTCATTTTGGAGATTG +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLAECPH*ASFWRL
Trigger: CAATCTCCAAAATGAAGCTCAGTGTGGGCACTCAGC...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp ACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTGAAGTCGAAGTGGGCTaGATTCAAGGAGATGAGCTT +
Preference number: 4 (lower is better)
Translates to: TNFIDSPLGPGPTVYLQAEVEVG*IQGDEL
Trigger: AAGCTCATCTCCTTGAATTCAGCCCACTTCGACTTC...AGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCGTATCAGGAAATAGCTaGTCTAGACGGGGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFVSGNS*SRRGSR
Trigger: TCGAGAGCCCCGTCTAGAGCAGCTATTTCCTGATAC...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCGAATATCCTCTTGCCTaGGAAACGGAATGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFEYPLA*ETEWSR
Trigger: CCTCGACCATTCCGTTTCGCAGGCAAGAGGATATTC...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCGTTGAGCTTCTGTTCTaGTGGCTCTGTTTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLVELLF*WLCLFP
Trigger: TGGAAACAAACAGAGCCAGCAGAACAGAAGCTCAAC...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCTCTTCTCTGAGAAATTaGAGCCCTGGAAGTCGAAGT +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLSSLRN*SPGSRS
Trigger: ACTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGA...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTTTAGGCCTCGGCTGTTaGGTACATGTTTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLLGLGC*VHVSAS
Trigger: GGATGCTGAAACATGTACGCAACAGCCGAGGCCTAA...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGTCCACCTTCTCCACGTaGGCTAGATTCCCTGAATCA +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKSTFST*ARFPES
Trigger: TGATTCAGGGAATCTAGCCCACGTGGAGAAGGTGGA...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCCCGATGGTAATAGATaGTATCCAGGGGGCTGCTAT +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKPDGNR*YPGGCY
Trigger: ATAGCAGCCCCCTGGATACCATCTATTACCATCGGG...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCCCTGGAAGTCGAAGTaGGCTGAATTCAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLPWKSK*AEFKEM
Trigger: CATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGG...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGAGAAATTGCAGCCCTaGAAGTCGAAGTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQEKLQP*KSKWAE
Trigger: TTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCTC...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCATTGTGACTTTTGGGTaGAGTTCGAAGGCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIIVTFG*SSKAPL
Trigger: AAGAGGGGCCTTCGAACTCCACCCAAAAGTCACAAT...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp AAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGTGTGGAGAATTTTGTTaGCTGCTGCTGCTACCACCG +
Preference number: 4 (lower is better)
Translates to: KLILLIHPLVLGQQYIFKCGEFC*LLLLPP
Trigger: CGGTGGTAGCAGCAGCAGCCAACAAAATTCTCCACA...CTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCACCCCTTGGTCCTaGGCCAACAGTATATCTTCA +
Preference number: 4 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIFTPWS*ANSISS
Trigger: TGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAA...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATGCTGAAGTAGAACCATaGCCTGTTCCCATTCTCAAA +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYAEVEP*PVPILK
Trigger: TTTGAGAATGGGAACAGGTCATGGTTCTACTTCAGC...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATCCCTCCACGAAACGATaGACAAAGGATAACACAAAC +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYPSTKR*TKDNTN
Trigger: GTTTGTGTTATCCTTTGTTCATCGTTTCGTGGAGGG...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTGCTGTGGATTATCCCTaGGGCTTTGTAGATTGCAAC +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLAVDYP*GFVDCN
Trigger: GTTGCAATCTACAAAGCCTCAGGGATAATCCACAGC...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAATAGCTCGTCCCACCTaGTCAAATAGTTCCACAGTG +
Preference number: 4 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQIARPT*SNSSTV
Trigger: CACTGTGGAACTATTTGAGCAGGTGGGACGAGCTAT...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTGGTGCTAAAACTTCGTaGCCGACTCAAGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLGAKTS*PTQGVF
Trigger: GAAAACACCTTGAGTCGGGCACGAAGTTTTAGCACC...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCAAGGATAACACAAACTaGGTCTCTGTCATCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLKDNTN*VSVISK
Trigger: CTTTGAGATGACAGAGACGCAGTTTGTGTTATCCTT...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTAGAAGAATATCCTCTTaGCTGCGAAACGGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLRRISS*LRNGMV
Trigger: GACCATTCCGTTTCGCAGGCAAGAGGATATTCTTCT...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCCTGGGTGTACTCTACTaGTTAAGAAGAATATCCTCT +
Preference number: 4 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLLGVLY*LRRISS
Trigger: AGAGGATATTCTTCTTAAGCAGTAGAGTACACCCAG...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATGTCCAGTGTTGTAGTTaGATTCAAGTGTGTAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYVQCCS*IQVCSC
Trigger: ACAGCTACACACTTGAATGCAACTACAACACTGGAC...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCTTAGTAAGGCTGCTGTaGTCTGACAGTACAATTCGG +
Preference number: 4 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFLVRLL*SDSTIR
Trigger: CCGAATTGTACTGTCAGAGCACAGCAGCCTTACTAA...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAAGCATGTTTTCCACCTaGGTGCTCTCATCACTAAAG +
Preference number: 4 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQSMFST*VLSSLK
Trigger: CTTTAGTGATGAGAGCACCCAGGTGGAAAACATGCT...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp ACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCATGAAAAGGAAAGCTaGGGGAATTCTTCATCTGTG +
Preference number: 4 (lower is better)
Translates to: TNFIDSPLGPGPTVYLQAHEKES*GNSSSV
Trigger: CACAGATGAAGAATTCCCCCAGCTTTCCTTTTCATG...AGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CCA 90 bp ACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTGGAATTCTTCATCTGTaGAGAATTTTGTTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TNFIDSPLGPGPTVYLQAGILHL*RILLAA
Trigger: AGCAGCCAACAAAATTCTCCACAGATGAAGAATTCC...AGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR TCA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCTGAATTCAAGGAGATaGGCTTTGGATATAGCATGT +
Preference number: 4 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLLNSRR*ALDIAC
Trigger: ACATGCTATATCCAAAGCTCATCTCCTTGAATTCAG...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR GCA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATGAATACAGCTTGCTCTaGTTGTTCATGTTCATAATG +
Preference number: 4 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYEYSLL*LFMFIM
Trigger: CATTATGAACATGAACAAGCAGAGCAAGCTGTATTC...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS CCA 90 bp CTCTGTCATCTCAAAGGTGGGCCGGTCTCGAATGCGTTCCCAGCGTaGCCGGGTGGGCAGTGTGCGCACAAAGGGGGCCATGCCCTGGGA +
Preference number: 5 (lower is better)
Translates to: LCHLKGGPVSNAFPA*PGGQCAHKGGHALG
Trigger: TCCCAGGGCATGGCCCCCTTTGTGCGCACACTGCCCACCCGGCCACGCTGGGAACGCATTCGAGACCGGCCCACCTTTGAGATGACAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 90 bp CTGGCCCTGAGAGCTAGCGACTGGAGCTCCCTTCCAGCCAGGGCATaGGTCTGTTTCCATCCCCCTCCGCCCCGTAAGCACTGCACCCTG +
Preference number: 5 (lower is better)
Translates to: LALRASDWSSLPARA*VCFHPPPPRKHCTL
Trigger: CAGGGTGCAGTGCTTACGGGGCGGAGGGGGATGGAAACAGACCCATGCCCTGGCTGGAAGGGAGCTCCAGTCGCTAGCTCTCAGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437006.1
CDS CCA 90 bp TCTCAAAGGTGGGCCGGTCTCGAATGCGTTCCCAGCGTGGCCGGGTaGGCAGTGTGCGCACAAAGGGGGCCATGCCCTGGGAATACAGCT +
Preference number: 5 (lower is better)
Translates to: SQRWAGLECVPSVAG*AVCAQRGPCPGNTA
Trigger: AGCTGTATTCCCAGGGCATGGCCCCCTTTGTGCGCACACTGCCCACCCGGCCACGCTGGGAACGCATTCGAGACCGGCCCACCTTTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 90 bp GGCCGGAGGGTTCTAGCAGCGTCTTCCGGAAGACGGTTAACGGCCTaGCTGCCGGGAGGCGGGAAAGATAAAGCGGCAGAAACTGGGACT +
Preference number: 5 (lower is better)
Translates to: GRRVLAASSGRRLTA*LPGGGKDKAAETGT
Trigger: AGTCCCAGTTTCTGCCGCTTTATCTTTCCCGCCTCCCGGCAGGCAGGCCGTTAACCGTCTTCCGGAAGACGCTGCTAGAACCCTCCGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421915.5
ENST00000453161.5
CDS-3UTR CAA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGAGGCGACGGAGGGTTaGGGCCCGGGGATCATCAGG +
Preference number: 5 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGEATEG*GPGIIR
Trigger: CCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCTC...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS CCA 90 bp GGGAGTTCAGACGAGAGTGCACATGGTGGTAGAGAAGCACAGCTTTaGCCCCATAGATGGCCGGGTGCAGGACGGCATCAGGCTTCAGGT +
Preference number: 5 (lower is better)
Translates to: GSSDESAHGGREAQL*PHRWPGAGRHQASG
Trigger: ACCTGAAGCCTGATGCCGTCCTGCACCCGGCCATCTATGGGGCCAAAGCTGTGCTTCTCTACCACCATGTGCACTCTCGTCTGAACTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 90 bp CCACCTTCTCCACGTGGGCTAGATTCCCTGAATCAAAGCGAGAACTaGACAGCAATCCCCCACAGCGCAGCTCCATGGTGGGGCTGGGAA +
Preference number: 5 (lower is better)
Translates to: PPSPRGLDSLNQSEN*TAIPHSAAPWWGWE
Trigger: TTCCCAGCCCCACCATGGAGCTGCGCTGTGGGGGATTGCTGTTCAGTTCTCGCTTTGATTCAGGGAATCTAGCCCACGTGGAGAAGGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000421915.5
ENST00000437006.1
ENST00000451003.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 90 bp GCTGCTGCTGCTACCACCGGCACTTGTGCCGGTGCTAAAACTTCGTaGCCGACTCAAGGTGTTTTCGGAGCAGGAGACAGGCAACCCATT +
Preference number: 5 (lower is better)
Translates to: AAAATTGTCAGAKTS*PTQGVFGAGDRQPI
Trigger: AATGGGTTGCCTGTCTCCTGCTCCGAAAACACCTTGAGTCGGGCACGAAGTTTTAGCACCGGCACAAGTGCCGGTGGTAGCAGCAGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS CCA 90 bp GAGAGTGCACATGGTGGTAGAGAAGCACAGCTTTGGCCCCATAGATaGCCGGGTGCAGGACGGCATCAGGCTTCAGGTACTGACGGTTCA +
Preference number: 5 (lower is better)
Translates to: ESAHGGREAQLWPHR*PGAGRHQASGTDGS
Trigger: TGAACCGTCAGTACCTGAAGCCTGATGCCGTCCTGCACCCGGCCATCTATGGGGCCAAAGCTGTGCTTCTCTACCACCATGTGCACTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS-3UTR CAA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCCGGTGGGTGACCTTTaGGGTACTAGAGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQPVGDL*GTRAQA
Trigger: GGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCGG...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS GCA 90 bp CCTGCGAAACGGAATGGTCGAGGGGTGCTGGTATCAGGAAATAGCTaGTCTAGACGGGGCTCTCGATCTTCTCGAAGCCCATGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: PAKRNGRGVLVSGNS*SRRGSRSSRSPWQE
Trigger: TTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGTCTAGAGCAGCTATTTCCTGATACCAGCACCCCTCGACCATTCCGTTTCGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 90 bp CAGCGTGGCCGGGTGGGCAGTGTGCGCACAAAGGGGGCCATGCCCTaGGAATACAGCTTGCTCTGCTTGTTCATGTTCATAATGTTGATC +
Preference number: 5 (lower is better)
Translates to: QRGRVGSVRTKGAMP*EYSLLCLFMFIMLI
Trigger: GATCAACATTATGAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGCGCACACTGCCCACCCGGCCACGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS-3UTR CAA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGAGGCGACGGAGGGTTaGGGCCCGGGGATCATCAGG +
Preference number: 5 (lower is better)
Translates to: VPVLFCLKVILCNALDSVEATEG*GPGIIR
Trigger: CCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCTC...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS TCA 90 bp AGGGCATCCGAGCTCCAGTCCCTAGCAGACCTTTCCCGATTACCATaGCAGCCTCTGGTTTGTCTCCAGAGGACAAGAGTGAGCAACTGC +
Preference number: 5 (lower is better)
Translates to: RASELQSLADLSRLP*QPLVCLQRTRVSNC
Trigger: GCAGTTGCTCACTCTTGTCCTCTGGAGACAAACCAGAGGCTGTCATGGTAATCGGGAAAGGTCTGCTAGGGACTGGAGCTCGGATGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS GCA 90 bp TCCTGGGCCAACAGTATATCTTCAAGCTCTTACTTCCCCCAGCAATaGCCCAGACAACCGAACACATGTTGCAGGGGCTCCCAGACTGGC +
Preference number: 5 (lower is better)
Translates to: SWANSISSSSYFPQQ*PRQPNTCCRGSQTG
Trigger: GCCAGTCTGGGAGCCCCTGCAACATGTGTTCGGTTGTCTGGGGCATTGCTGGGGGAAGTAAGAGCTTGAAGATATACTGTTGGCCCAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS CCA 90 bp GTCCTCTCTCCAGCCTCTGTCCTCACAAGTACTGAGCGGACATTCTaGTGTTGCTCCCCTGAGCCCTGGAAGGGCTGGTTCTTCCTTTTT +
Preference number: 5 (lower is better)
Translates to: VLSPASVLTSTERTF*CCSPEPWKGWFFLF
Trigger: AAAAAGGAAGAACCAGCCCTTCCAGGGCTCAGGGGAGCAACACCAGAATGTCCGCTCAGTACTTGTGAGGACAGAGGCTGGAGAGAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451003.5
CDS-3UTR CAA 90 bp CGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAAGGCCCCTCTTCTTGTaGACACCCACATTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: RGWHSKDLTAVTWNQRPGRPLFL*TPTFRV
Trigger: CACTCTGAATGTGGGTGTCAACAAGAAGAGGGGCCT...TCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCACCGGTGGGTGACCTTTaGGGTACTAGAGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: FCLKVILCNALDSVAGIPPVGDL*GTRAQA
Trigger: GGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCGG...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS CCA 90 bp TTCAACATGGGAATCAGCTTAAAGACGAAGAGGCGACGGAGGGTTTaGGCCCGGGGATCATCAGGTCGGAGGATGAAGTCCAGAAAGCCA +
Preference number: 5 (lower is better)
Translates to: FNMGISLKTKRRRRV*ARGSSGRRMKSRKP
Trigger: TGGCTTTCTGGACTTCATCCTCCGACCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCTCTTCGTCTTTAAGCTGATTCCCATGTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS-3UTR CAA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCGCCTGCAATCGAGTCTaGATGCAGGGCATCCGAGCT +
Preference number: 5 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFACNRV*MQGIRA
Trigger: AGCTCGGATGCCCTGCATCAAGACTCGATTGCAGGC...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360131.5
CDS-3UTR CAA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGTGTGGTCCCAAAATCTaGTGCTGCGGAGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMCGPKI*CCGGRE
Trigger: TTCCCTCCCTCCGCAGCACAAGATTTTGGGACCACA...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTCTGCAATCGAGTCTaGATGCAGGGCATCCGAGCT +
Preference number: 5 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTVCNRV*MQGIRA
Trigger: AGCTCGGATGCCCTGCATCAAGACTCGATTGCAGAC...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS TCA 90 bp CAGAAGGCGAAGAAGGTGGTGGCCCCACGGCCCTCCACGAAACGATaGACAAAGGATAACACAAACTGCGTCTCTGTCATCTCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: QKAKKVVAPRPSTKR*TKDNTNCVSVISKV
Trigger: CACCTTTGAGATGACAGAGACGCAGTTTGTGTTATCCTTTGTTCATCGTTTCGTGGAGGGCCGTGGGGCCACCACCTTCTTCGCCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 90 bp GCTGGCACGCCCATTGTCATGGCAGGCAGCAGGGATGCTGTTTACTaGGCGTCCAGTGTTGTAGTTGCATTCAAGTGTGTAGCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: AGTPIVMAGSRDAVY*ASSVVVAFKCVAVD
Trigger: ATCCACAGCTACACACTTGAATGCAACTACAACACTGGACGCTCAGTAAACAGCATCCCTGCTGCCTGCCATGACAATGGGCGTGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS TCA 90 bp ACCCATTGTGACTTTTGGGTGGAGTTCGAAGGCCCCTCTTCTTGTTaGCACCCACATTCAGAGTGCTGCTTAGGCCTCGGCTGTTGCGTA +
Preference number: 5 (lower is better)
Translates to: THCDFWVEFEGPSSC*HPHSECCLGLGCCV
Trigger: TACGCAACAGCCGAGGCCTAAGCAGCACTCTGAATGTGGGTGTCAACAAGAAGAGGGGCCTTCGAACTCCACCCAAAAGTCACAATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS CCA 90 bp GGAAATAGCTGCTCTAGACGGGGCTCTCGATCTTCTCGAAGCCCATaGCAGGAAGTGATCGTCAGCAGATCTACACGAAGTCCATCCAGA +
Preference number: 5 (lower is better)
Translates to: GNSCSRRGSRSSRSP*QEVIVSRSTRSPSR
Trigger: TCTGGATGGACTTCGTGTAGATCTGCTGACGATCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGTCTAGAGCAGCTATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS-3UTR CAA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGAAGCCCCGCAGACTGTaGTGGCATAATCCACACACT +
Preference number: 5 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQKPRRL*WHNPHT
Trigger: AGTGTGTGGATTATGCCACAACAGTCTGCGGGGCTT...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGAGGCTTTGTAGATaGCAACACGGCCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPLRLCR*QHGRFP
Trigger: AGGGAAGCGGCCGTGTTGCAATCTACAAAGCCTCAG...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTAAAACAAACCTCAGGTaGGCCCAAGGGACCCCTGCT +
Preference number: 5 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFKTNLR*AQGTPA
Trigger: AGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCTGTGGTCCCAAAATCTaGTGCTGCGGAGGGAGGGAA +
Preference number: 5 (lower is better)
Translates to: DLTAVTWNQRPGGELAYFCGPKI*CCGGRE
Trigger: TTCCCTCCCTCCGCAGCACAAGATTTTGGGACCACA...GAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGCCCAGTATAGGGGCTaGCTTTTCTACTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: GWQVPVLFCLKVILCNALAQYRG*LFYSLP
Trigger: GGGGAGGGAGTAGAAAAGCAAGCCCCTATACTGGGC...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCGCCCAGTATAGGGGCTaGCTTTTCTACTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: VLFCLKVILCNALDSVAGAQYRG*LFYSLP
Trigger: GGGGAGGGAGTAGAAAAGCAAGCCCCTATACTGGGC...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS TCA 90 bp CATTCTCAAATTCCGTTTCAGCACAGTCTGGTCGGGTCCACACGTTaGATTCATAGTCAGGGGAAGAGGCAATGCCACTGGTCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: HSQIPFQHSLVGSTR*IHSQGKRQCHWSGL
Trigger: CAGCCCTGACCAGTGGCATTGCCTCTTCCCCTGACTATGAATTCAACGTGTGGACCCGACCAGACTGTGCTGAAACGGAATTTGAGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 90 bp GCTCTAGACGGGGCTCTCGATCTTCTCGAAGCCCATGGCAGGAAGTaGTCGTCAGCAGATCTACACGAAGTCCATCCAGAGAATAGCAAA +
Preference number: 5 (lower is better)
Translates to: ALDGALDLLEAHGRK*SSADLHEVHPENSK
Trigger: TTTGCTATTCTCTGGATGGACTTCGTGTAGATCTGCTGACGATCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGTCTAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 90 bp TGGCAAACCCAGATTTCAGTGGCAGTGGGTACAGACCTGGTATGTTaGATGAATCAGGCAGTAGACAGGAGCCCAGCTTGTGTGAGGAGG +
Preference number: 5 (lower is better)
Translates to: WQTQISVAVGTDLVC*MNQAVDRSPACVRR
Trigger: CCTCCTCACACAAGCTGGGCTCCTGTCTACTGCCTGATTCATTCAACATACCAGGTCTGTACCCACTGCCACTGAAATCTGGGTTTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441931.1
CDS TCA 90 bp AAGAGGACTGGGAACACAGAAGCCAGAAGGCTGACAGAATTTCACTaGGATGCAGGGCATGAGGGGAAATGGGAACAGTCCAGACAGGCT +
Preference number: 5 (lower is better)
Translates to: KRTGNTEARRLTEFH*DAGHEGKWEQSRQA
Trigger: AGCCTGTCTGGACTGTTCCCATTTCCCCTCATGCCCTGCATCTCAGTGAAATTCTGTCAGCCTTCTGGCTTCTGTGTTCCCAGTCCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477136.5
CDS GCA 90 bp CGTACATGTTTCAGCATCCAGGCCCGTAGATTAGTAAGGCTGCTGTaGTCTGACAGTACAATTCGGGGCCACGGATTACATTCCGCCATG +
Preference number: 5 (lower is better)
Translates to: RTCFSIQARRLVRLL*SDSTIRGHGLHSAM
Trigger: CATGGCGGAATGTAATCCGTGGCCCCGAATTGTACTGTCAGAGCACAGCAGCCTTACTAATCTACGGGCCTGGATGCTGAAACATGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS CCA 90 bp CCTACCCCTTCCCCATCACTGGACAAAGATTCCACCTTCTCCACGTaGGCTAGATTCCCTGAATCAAAGCGAGAACTGAACAGCAATCCC +
Preference number: 5 (lower is better)
Translates to: PTPSPSLDKDSTFST*ARFPESKRELNSNP
Trigger: GGGATTGCTGTTCAGTTCTCGCTTTGATTCAGGGAATCTAGCCCACGTGGAGAAGGTGGAATCTTTGTCCAGTGATGGGGAAGGGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000421915.5
ENST00000451003.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 90 bp AGAAGAATATCCTCTTGCCTGCGAAACGGAATGGTCGAGGGGTGCTaGTATCAGGAAATAGCTGCTCTAGACGGGGCTCTCGATCTTCTC +
Preference number: 5 (lower is better)
Translates to: RRISSCLRNGMVEGC*YQEIAALDGALDLL
Trigger: GAGAAGATCGAGAGCCCCGTCTAGAGCAGCTATTTCCTGATACCAGCACCCCTCGACCATTCCGTTTCGCAGGCAAGAGGATATTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS-3UTR CAA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCCCCTGGGAATACAGCTaGCTCTGCTTGTTCATGTTC +
Preference number: 5 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPPWEYS*LCLFMF
Trigger: GAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGG...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp AAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTATAATCCACACACTGTaGAGCTTCTGTTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: KPQVGPRDPCCNNSRMGSIIHTL*SFCSAG
Trigger: GCCAGCAGAACAGAAGCTCAACAGTGTGTGGATTAT...ACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp TTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCAATGAAGCAGCCCCTTTaGGAAGCATGTCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: LTAVTWNQRPGGELAYFPMKQPL*EACPCR
Trigger: CCTGCATGGACATGCTTCCAAAAGGGGCTGCTTCAT...TGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp AAAACAAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGATGAAGCAGCCCCTTTaGGAAGCATGTCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: KTNLRLAQGTPAVTIPGWMKQPL*EACPCR
Trigger: CCTGCATGGACATGCTTCCAAAAGGGGCTGCTTCAT...CCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp ATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGAAACAGTCAGTGGCTGAGGCTTTGTAGATaGCAACACGGCCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ILGLNIKALSDPGRNSQWLRLCR*QHGRFP
Trigger: AGGGAAGCGGCCGTGTTGCAATCTACAAAGCCTCAG...CCACTGACTGTTTCTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATCTTAGGCCTCGGCTGTaGCGTACATGTTTCAGCATC +
Preference number: 5 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYLRPRL*RTCFSI
Trigger: GATGCTGAAACATGTACGCAACAGCCGAGGCCTAAG...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp AAAACAAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGAGGCCCCTCTTCTTGTaGACACCCACATTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: KTNLRLAQGTPAVTIPGWRPLFL*TPTFRV
Trigger: CACTCTGAATGTGGGTGTCAACAAGAAGAGGGGCCT...CCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCGAAGGCCCCTCTTCTaGTTGACACCCACATTCAGA +
Preference number: 5 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFRRPLF*LTPTFR
Trigger: TCTGAATGTGGGTGTCAACAAGAAGAGGGGCCTTCG...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGCTGTGGAGAATTTTGTaGGCTGCTGCTGCTACCACC +
Preference number: 5 (lower is better)
Translates to: CLKVILCNALDSVAGIPRLWRIL*AAAATT
Trigger: GGTGGTAGCAGCAGCAGCCAACAAAATTCTCCACAG...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp AAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATCTGTGGAGAATTTTGTaGGCTGCTGCTGCTACCACC +
Preference number: 5 (lower is better)
Translates to: KDLTAVTWNQRPGGELAYLWRIL*AAAATT
Trigger: GGTGGTAGCAGCAGCAGCCAACAAAATTCTCCACAG...ATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCAAAACAAACCTCAGGTaGGCCCAAGGGACCCCTGCT +
Preference number: 5 (lower is better)
Translates to: VLFCLKVILCNALDSVAGKTNLR*AQGTPA
Trigger: AGCAGGGGTCCCTTGGGCCAACCTGAGGTTTGTTTT...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGCACTGTTACCCCATCTaGGGGCTATATCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: CLKVILCNALDSVAGIPRHCYPI*GLYPGL
Trigger: AAGCCCAGGATATAGCCCCAAGATGGGGTAACAGTG...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAATACTCTGTAATGCCTaGGACAGCGTGGCTGGCATT +
Preference number: 5 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELILCNA*DSVAGI
Trigger: AATGCCAGCCACGCTGTCCAAGGCATTACAGAGTAT...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGATACTCTGTAATGCCTaGGACAGCGTGGCTGGCATT +
Preference number: 5 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQILCNA*DSVAGI
Trigger: AATGCCAGCCACGCTGTCCAAGGCATTACAGAGTAT...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS GCA 90 bp CGCAGACTGTTGTGGCATAATCCACACACTGTTGAGCTTCTGTTCTaGTGGCTCTGTTTGTTTCCAGGCTTCAGCGTTATGCCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: RRLLWHNPHTVELLF*WLCLFPGFSVMPVS
Trigger: GCTGACAGGCATAACGCTGAAGCCTGGAAACAAACAGAGCCAGCAGAACAGAAGCTCAACAGTGTGTGGATTATGCCACAACAGTCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS-3UTR CAA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGAGGCGACGGAGGGTTaGGGCCCGGGGATCATCAGG +
Preference number: 5 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQEATEG*GPGIIR
Trigger: CCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCTC...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATTTCTGCTGGCTCTGTTaGTTTCCAGGCTTCAGCGTT +
Preference number: 5 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHFCWLC*FPGFSV
Trigger: AACGCTGAAGCCTGGAAACAAACAGAGCCAGCAGAA...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGTTCTGCTGGCTCTGTTaGTTTCCAGGCTTCAGCGTT +
Preference number: 5 (lower is better)
Translates to: CLKVILCNALDSVAGIPRFCWLC*FPGFSV
Trigger: AACGCTGAAGCCTGGAAACAAACAGAGCCAGCAGAA...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGATAATCCACACACTGTaGAGCTTCTGTTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMIIHTL*SFCSAG
Trigger: GCCAGCAGAACAGAAGCTCAACAGTGTGTGGATTAT...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp CTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGGAATCAGTTCTTCTCTGAGAAATaGCAGCCCTGGAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LGQRGWHSKDLTAVTWNQFFSEK*QPWKSK
Trigger: CTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGAA...CTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp AACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTTTCTTCTCTGAGAAATaGCAGCCCTGGAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: NGCHMESAAWRGTSIFPTFFSEK*QPWKSK
Trigger: CTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGAA...AGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp TTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCACACTGTTACCCCATCTaGGGGCTATATCCTGGGCTT +
Preference number: 5 (lower is better)
Translates to: FCLKVILCNALDSVAGIPHCYPI*GLYPGL
Trigger: AAGCCCAGGATATAGCCCCAAGATGGGGTAACAGTG...TGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp CATTCCAAGGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTATGGCAGGTCCCTGTTTaGTTCTGTCTCAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: HSKDLTAVTWNQRPGGELWQVPV*FCLKVI
Trigger: TATCACCTTGAGACAGAACAAAACAGGGACCTGCCA...TAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCCTTGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS TCA 90 bp TGCTGGCTCTGTTTGTTTCCAGGCTTCAGCGTTATGCCTGTCAGCTaGGTGCCCACACTGAGCTTCATTTTGGAGATTGTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: CWLCLFPGFSVMPVS*VPTLSFILEIVGFL
Trigger: GAGAAAGCCAACAATCTCCAAAATGAAGCTCAGTGTGGGCACTCAGCTGACAGGCATAACGCTGAAGCCTGGAAACAAACAGAGCCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 90 bp TTAAGAAGAATATCCTCTTGCCTGCGAAACGGAATGGTCGAGGGGTaGTGGTATCAGGAAATAGCTGCTCTAGACGGGGCTCTCGATCTT +
Preference number: 5 (lower is better)
Translates to: LRRISSCLRNGMVEG*WYQEIAALDGALDL
Trigger: AAGATCGAGAGCCCCGTCTAGAGCAGCTATTTCCTGATACCAGCACCCCTCGACCATTCCGTTTCGCAGGCAAGAGGATATTCTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS-3UTR CAA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCGCTTCATTTTGGAGATaGTTGGCTTTCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPASFWR*LAFSRS
Trigger: TGACCTGGAGAAAGCCAACAATCTCCAAAATGAAGC...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGAAGCCCCGCAGACTGTaGTGGCATAATCCACACACT +
Preference number: 5 (lower is better)
Translates to: VPVLFCLKVILCNALDSVKPRRL*WHNPHT
Trigger: AGTGTGTGGATTATGCCACAACAGTCTGCGGGGCTT...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGCTTAGGCCTCGGCTGTaGCGTACATGTTTCAGCATC +
Preference number: 5 (lower is better)
Translates to: VPVLFCLKVILCNALDSVLRPRL*RTCFSI
Trigger: GATGCTGAAACATGTACGCAACAGCCGAGGCCTAAG...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGCGAAGGCCCCTCTTCTaGTTGACACCCACATTCAGA +
Preference number: 5 (lower is better)
Translates to: VPVLFCLKVILCNALDSVRRPLF*LTPTFR
Trigger: TCTGAATGTGGGTGTCAACAAGAAGAGGGGCCTTCG...CACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATCCGGTGGGTGACCTTTaGGGTACTAGAGCCCAGGCC +
Preference number: 5 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYPVGDL*GTRAQA
Trigger: GGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCGG...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp GGGTGGCAGGTCCCTGTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGATGACAGCCTCTGGTTaGTCTCCAGAGGACAAGAGT +
Preference number: 5 (lower is better)
Translates to: GWQVPVLFCLKVILCNALMTASG*SPEDKS
Trigger: ACTCTTGTCCTCTGGAGACAAACCAGAGGCTGTCAT...CAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAACAGGGACCTGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATGACAGCCTCTGGTTaGTCTCCAGAGGACAAGAGT +
Preference number: 5 (lower is better)
Translates to: VLFCLKVILCNALDSVAGMTASG*SPEDKS
Trigger: ACTCTTGTCCTCTGGAGACAAACCAGAGGCTGTCAT...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp AAACCTCAGGTTGGCCCAAGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTGGCTATATCCTGGGCTaGAACATAAAGGCATTATCA +
Preference number: 5 (lower is better)
Translates to: KPQVGPRDPCCNNSRMGSGYILG*NIKALS
Trigger: TGATAATGCCTTTATGTTCAAGCCCAGGATATAGCC...ACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCTTGGGCCAACCTGAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp GGACTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTTGGCAGGTCCCTGTTTaGTTCTGTCTCAAGGTGATA +
Preference number: 5 (lower is better)
Translates to: GLNGCHMESAAWRGTSIFWQVPV*FCLKVI
Trigger: TATCACCTTGAGACAGAACAAAACAGGGACCTGCCA...AAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS TCA 90 bp TGTTTCCAGGCTTCAGCGTTATGCCTGTCAGCTGAGTGCCCACACTaGGCTTCATTTTGGAGATTGTTGGCTTTCTCCAGGTCAGAAACA +
Preference number: 5 (lower is better)
Translates to: CFQASALCLSAECPH*ASFWRLLAFSRSET
Trigger: TGTTTCTGACCTGGAGAAAGCCAACAATCTCCAAAATGAAGCTCAGTGTGGGCACTCAGCTGACAGGCATAACGCTGAAGCCTGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 90 bp AGTGTGCGCACAAAGGGGGCCATGCCCTGGGAATACAGCTTGCTCTaGTTGTTCATGTTCATAATGTTGATCTTGATGAGTTTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: SVRTKGAMPWEYSLL*LFMFIMLILMSFPG
Trigger: GCCAGGAAAACTCATCAAGATCAACATTATGAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGCGCACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS-3UTR CAA 90 bp TGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGAAGAAGAATATCCTCTaGCCTGCGAAACGGAATGGT +
Preference number: 5 (lower is better)
Translates to: CLKVILCNALDSVAGIPRKKNIL*PAKRNG
Trigger: ACCATTCCGTTTCGCAGGCAAGAGGATATTCTTCTT...CCTTGGAATGCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTAATGCCTTGGACAGCGTGGCTGGCATTCCAAGGACTTAACGGCTGTCACATGTCATTTTGGAGATTGTaGGCTTTCTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: VMPWTAWLAFQGLNGCHMSFWRL*AFSRSE
Trigger: TTCTGACCTGGAGAAAGCCAACAATCTCCAAAATGA...CATGTGACAGCCGTTAAGTCCTTGGAATGCCAGCCACGCTGTCCAAGGCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCCTGCTCCCTGGTATGTaGAATGAATCAGGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: VLFCLKVILCNALDSVAGLLPGM*NESGSR
Trigger: TCTACTGCCTGATTCATTCAACATACCAGGGAGCAG...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp ATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGAAACAGTCAGTGGCTGCTCCCTGGTATGTaGAATGAATCAGGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: ILGLNIKALSDPGRNSQWLLPGM*NESGSR
Trigger: TCTACTGCCTGATTCATTCAACATACCAGGGAGCAG...CCACTGACTGTTTCTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp CTTAACGGCTGTCACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCGGCTATATCCTGGGCTaGAACATAAAGGCATTATCA +
Preference number: 5 (lower is better)
Translates to: LNGCHMESAAWRGTSIFPGYILG*NIKALS
Trigger: TGATAATGCCTTTATGTTCAAGCCCAGGATATAGCC...GGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGTGACAGCCGTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS TCA 90 bp AGAAATTGCAGCCCTGGAAGTCGAAGTGGGCTGAATTCAAGGAGATaGGCTTTGGATATAGCATGTTTTCCACCTGGGTGCTCTCATCAC +
Preference number: 5 (lower is better)
Translates to: RNCSPGSRSGLNSRR*ALDIACFPPGCSHH
Trigger: GTGATGAGAGCACCCAGGTGGAAAACATGCTATATCCAAAGCTCATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
CDS TCA 90 bp TTCATCAACTATATCTCAGCTTCCACCCAACCTGTGGATTATCCCTaGGGCTTTGTAGATTGCAACACGGCCGCTTCCCTCTTTAGACTG +
Preference number: 5 (lower is better)
Translates to: FINYISASTQPVDYP*GFVDCNTAASLFRL
Trigger: CAGTCTAAAGAGGGAAGCGGCCGTGTTGCAATCTACAAAGCCTCAGGGATAATCCACAGGTTGGGTGGAAGCTGAGATATAGTTGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477136.5
CDS-3UTR CAA 90 bp GTTTTGTTCTGTCTCAAGGTGATACTCTGTAATGCCTTGGACAGCGTGGCTGGCAAGAAGAATATCCTCTaGCCTGCGAAACGGAATGGT +
Preference number: 5 (lower is better)
Translates to: VLFCLKVILCNALDSVAGKKNIL*PAKRNG
Trigger: ACCATTCCGTTTCGCAGGCAAGAGGATATTCTTCTT...GCCAGCCACGCTGTCCAAGGCATTACAGAGTATCACCTTGAGACAGAACAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp ATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGAAACAGTCAGTGGGCTTCATTTTGGAGATaGTTGGCTTTCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: ILGLNIKALSDPGRNSQWASFWR*LAFSRS
Trigger: TGACCTGGAGAAAGCCAACAATCTCCAAAATGAAGC...CCACTGACTGTTTCTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATACACTGAGCTTCATTTaGGAGATTGTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHTLSFI*EIVGFL
Trigger: GAGAAAGCCAACAATCTCCAAAATGAAGCTCAGTGT...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS CCA 90 bp CTACGGTCTCGGGCATACATATTCTTCTCTGAGAAATTGCAGCCCTaGAAGTCGAAGTGGGCTGAATTCAAGGAGATGAGCTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: LRSRAYIFFSEKLQP*KSKWAEFKEMSFGY
Trigger: ATATCCAAAGCTCATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGAATATGTATGCCCGAGACCGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
CDS-3UTR CAA 90 bp ACATGGAATCAGCGGCCTGGAGGGGAACTAGCATATTTCCCACTGTTACCCCATTACAGCTTGCTCTGCTaGTTCATGTTCATAATGTTG +
Preference number: 5 (lower is better)
Translates to: TWNQRPGGELAYFPLLPHYSLLC*FMFIML
Trigger: CAACATTATGAACATGAACAAGCAGAGCAAGCTGTA...ATGGGGTAACAGTGGGAAATATGCTAGTTCCCCTCCAGGCCGCTGATTCCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS-3UTR CAA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGTCATTTTGGAGATTGTaGGCTTTCTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGESFWRL*AFSRSE
Trigger: TTCTGACCTGGAGAAAGCCAACAATCTCCAAAATGA...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp ATCTTGGGGCTATATCCTGGGCTTGAACATAAAGGCATTATCAGACCCGGGGAGACACTGAGCTTCATTTaGGAGATTGTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: ILGLYPGLEHKGIIRPGETLSFI*EIVGFL
Trigger: GAGAAAGCCAACAATCTCCAAAATGAAGCTCAGTGT...CTCCCCGGGTCTGATAATGCCTTTATGTTCAAGCCCAGGATATAGCCCCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp AGGGACCCCTGCTGTAACAATTCCAGGATGGGGAGTCAGATAGACTACAGGATATACAGCTTGCTCTGCTaGTTCATGTTCATAATGTTG +
Preference number: 5 (lower is better)
Translates to: RDPCCNNSRMGSQIDYRIYSLLC*FMFIML
Trigger: CAACATTATGAACATGAACAAGCAGAGCAAGCTGTA...TATCCTGTAGTCTATCTGACTCCCCATCCTGGAATTGTTACAGCAGGGGTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS-3UTR CAA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATAAGCCCCGCAGACTGTaGTGGCATAATCCACACACT +
Preference number: 5 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYKPRRL*WHNPHT
Trigger: AGTGTGTGGATTATGCCACAACAGTCTGCGGGGCTT...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAACTGAGGCTTTGTAGATaGCAACACGGCCGCTTCCCT +
Preference number: 5 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQLRLCR*QHGRFP
Trigger: AGGGAAGCGGCCGTGTTGCAATCTACAAAGCCTCAG...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCAGGCCCCTCTTCTTGTaGACACCCACATTCAGAGTG +
Preference number: 5 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIRPLFL*TPTFRV
Trigger: CACTCTGAATGTGGGTGTCAACAAGAAGAGGGGCCT...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCCGAAGGCCCCTCTTCTaGTTGACACCCACATTCAGA +
Preference number: 5 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIRRPLF*LTPTFR
Trigger: TCTGAATGTGGGTGTCAACAAGAAGAGGGGCCTTCG...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCCCTGGGAATACAGCTaGCTCTGCTTGTTCATGTTC +
Preference number: 5 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYPWEYS*LCLFMF
Trigger: GAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGG...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAATGAAGCAGCCCCTTTaGGAAGCATGTCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQMKQPL*EACPCR
Trigger: CCTGCATGGACATGCTTCCAAAAGGGGCTGCTTCAT...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAACTTAGGCCTCGGCTGTaGCGTACATGTTTCAGCATC +
Preference number: 5 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQLRPRL*RTCFSI
Trigger: GATGCTGAAACATGTACGCAACAGCCGAGGCCTAAG...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCCTGTGGAGAATTTTGTaGGCTGCTGCTGCTACCACC +
Preference number: 5 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFLWRIL*AAAATT
Trigger: GGTGGTAGCAGCAGCAGCCAACAAAATTCTCCACAG...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS CCA 90 bp GCATACATATTCTTCTCTGAGAAATTGCAGCCCTGGAAGTCGAAGTaGGCTGAATTCAAGGAGATGAGCTTTGGATATAGCATGTTTTCC +
Preference number: 5 (lower is better)
Translates to: AYIFFSEKLQPWKSK*AEFKEMSFGYSMFS
Trigger: GGAAAACATGCTATATCCAAAGCTCATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGAATATGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
CDS-3UTR CAA 90 bp CTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAGCTCGCTTCATTTTGGAGATaGTTGGCTTTCTCCAGGTCA +
Preference number: 5 (lower is better)
Translates to: LILLIHPLVLGQQYIFKLASFWR*LAFSRS
Trigger: TGACCTGGAGAAAGCCAACAATCTCCAAAATGAAGC...GAGCTTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTTTCTGCTGGCTCTGTTaGTTTCCAGGCTTCAGCGTT +
Preference number: 5 (lower is better)
Translates to: LQTNFIDSPLGPGPTVYLFCWLC*FPGFSV
Trigger: AACGCTGAAGCCTGGAAACAAACAGAGCCAGCAGAA...AAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp TTCTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATAATCCACACACTGTaGAGCTTCTGTTCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: FCYKLILLIHPLVLGQQYIIHTL*SFCSAG
Trigger: GCCAGCAGAACAGAAGCTCAACAGTGTGTGGATTAT...ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATTTCTTCTCTGAGAAATaGCAGCCCTGGAAGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYFFSEK*QPWKSK
Trigger: CTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGAA...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CTGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATAAGAAGAATATCCTCTaGCCTGCGAAACGGAATGGT +
Preference number: 5 (lower is better)
Translates to: LLQTNFIDSPLGPGPTVYKKNIL*PAKRNG
Trigger: ACCATTCCGTTTCGCAGGCAAGAGGATATTCTTCTT...ATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAATTATTGATTCACCCCTaGGTCCTGGGCCAACAGTAT +
Preference number: 5 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQLLIHP*VLGQQY
Trigger: ATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAA...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp TGCTACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTACAGCTTGCTCTGCTaGTTCATGTTCATAATGTTG +
Preference number: 5 (lower is better)
Translates to: CYKLILLIHPLVLGQQYIYSLLC*FMFIML
Trigger: CAACATTATGAACATGAACAAGCAGAGCAAGCTGTA...GATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCTCATTTTGGAGATTGTaGGCTTTCTCCAGGTCAGAA +
Preference number: 5 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFSFWRL*AFSRSE
Trigger: TTCTGACCTGGAGAAAGCCAACAATCTCCAAAATGA...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp CAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCAAACACTGAGCTTCATTTaGGAGATTGTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: QTNFIDSPLGPGPTVYLQTLSFI*EIVGFL
Trigger: GAGAAAGCCAACAATCTCCAAAATGAAGCTCAGTGT...TTGAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS-3UTR CAA 90 bp TACAAACTAATTTTATTGATTCACCCCTTGGTCCTGGGCCAACAGTATATCTTCTACAAACTAATTTTATaGATTCACCCCTTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: YKLILLIHPLVLGQQYIFYKLIL*IHPLVL
Trigger: CAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA...GAAGATATACTGTTGGCCCAGGACCAAGGGGTGAATCAATAAAATTAGTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS CCA 72 bp TGGGCCGGTCTCGAATGCGTTCCCAGCGTGGCCGGGTaGGCAGTGTGCGCACAAAGGGGGCCATGCCCTGGG +
Preference number: 6 (lower is better)
Translates to: WAGLECVPSVAG*AVCAQRGPCPG
Trigger: CCCAGGGCATGGCCCCCTTTGTGCGCACACTGCCCACCCGGCCACGCTGGGAACGCATTCGAGACCGGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp CCTCTGACGGGGCCCAGCACCCGGTGGGTGACCTTTTaGGTACTAGAGCCCAGGCCTGGCAGCCCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: PLTGPSTRWVTF*VLEPRPGSPAG
Trigger: GCCTGCAGGGCTGCCAGGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCGGGTGCTGGGCCCCGTCAGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS CCA 72 bp TCTCTGACGGGGCCCAGCACCCGGTGGGTGACCTTTTaGGTACTAGAGCCCAGGCCTGGCAGCCCTGCAGGC +
Preference number: 6 (lower is better)
Translates to: SLTGPSTRWVTF*VLEPRPGSPAG
Trigger: GCCTGCAGGGCTGCCAGGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCGGGTGCTGGGCCCCGTCAGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360131.5
ENST00000441931.1
ENST00000487078.5
CDS CCA 72 bp GGTGGGCTGCTAGAGTCCCACTCGGGGGAAGGAGGCTaGCTTCTCCACCCTCGACTCGCGGGGAACCGTCAC +
Preference number: 6 (lower is better)
Translates to: GGLLESHSGEGG*LLHPRLAGNRH
Trigger: GTGACGGTTCCCCGCGAGTCGAGGGTGGAGAAGCCAGCCTCCTTCCCCCGAGTGGGACTCTAGCAGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437006.1
CDS CCA 72 bp CTCAAAGGTGGGCCGGTCTCGAATGCGTTCCCAGCGTaGCCGGGTGGGCAGTGTGCGCACAAAGGGGGCCAT +
Preference number: 6 (lower is better)
Translates to: LKGGPVSNAFPA*PGGQCAHKGGH
Trigger: ATGGCCCCCTTTGTGCGCACACTGCCCACCCGGCCACGCTGGGAACGCATTCGAGACCGGCCCACCTTTGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 72 bp GCGTCTCTGTCATCTCAAAGGTGGGCCGGTCTCGAATaGGTTCCCAGCGTGGCCGGGTGGGCAGTGTGCGCA +
Preference number: 6 (lower is better)
Translates to: ASLSSQRWAGLE*VPSVAGWAVCA
Trigger: TGCGCACACTGCCCACCCGGCCACGCTGGGAACGCATTCGAGACCGGCCCACCTTTGAGATGACAGAGACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp CAGACTGGCTTACCTCTGACGGGGCCCAGCACCCGGTaGGTGACCTTTTGGGTACTAGAGCCCAGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: QTGLPLTGPSTR*VTFWVLEPRPG
Trigger: GCCAGGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCGGGTGCTGGGCCCCGTCAGAGGTAAGCCAGTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS CCA 72 bp CAGACAACCGAACACATGTTGCAGGGGCTCCCAGACTaGCTTACCTCTGACGGGGCCCAGCACCCGGTGGGT +
Preference number: 6 (lower is better)
Translates to: QTTEHMLQGLPD*LTSDGAQHPVG
Trigger: ACCCACCGGGTGCTGGGCCCCGTCAGAGGTAAGCCAGTCTGGGAGCCCCTGCAACATGTGTTCGGTTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS CCA 72 bp AACCTGGGCCTAGCCTGGGGAATCCGGGACCCCTCCTaGCGGAAACTCTCCTCGGACAGGTCTGCAATCGAG +
Preference number: 6 (lower is better)
Translates to: NLGLAWGIRDPS*RKLSSDRSAIE
Trigger: CTCGATTGCAGACCTGTCCGAGGAGAGTTTCCGCCAGGAGGGGTCCCGGATTCCCCAGGCTAGGCCCAGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487078.5
CDS GCA 72 bp GTGGCCGGGTGGGCAGTGTGCGCACAAAGGGGGCCATaGCCTGGGAATACAGCTTGCTCTGCTTGTTCATGT +
Preference number: 6 (lower is better)
Translates to: VAGWAVCAQRGP*PGNTACSACSC
Trigger: ACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGCGCACACTGCCCACCCGGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp CCGGTGGGTGACCTTTTGGGTACTAGAGCCCAGGCCTaGCAGCCCTGCAGGCCGACTGCCATGAAAAGGAAA +
Preference number: 6 (lower is better)
Translates to: PVGDLLGTRAQA*QPCRPTAMKRK
Trigger: TTTCCTTTTCATGGCAGTCGGCCTGCAGGGCTGCCAGGCCTGGGCTCTAGTACCCAAAAGGTCACCCACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000441931.1
ENST00000487078.5
CDS TCA 72 bp ATGGCCGGGTGCAGGACGGCATCAGGCTTCAGGTACTaGCGGTTCAGATTCACTCCACGTGAGTCTGTGCGG +
Preference number: 6 (lower is better)
Translates to: MAGCRTASGFRY*RFRFTPRESVR
Trigger: CCGCACAGACTCACGTGGAGTGAATCTGAACCGTCAGTACCTGAAGCCTGATGCCGTCCTGCACCCGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 72 bp GTTCTAGCAGCGTCTTCCGGAAGACGGTTAACGGCCTaGCTGCCGGGAGGCGGGAAAGATAAAGCGGCAGAA +
Preference number: 6 (lower is better)
Translates to: VLAASSGRRLTA*LPGGGKDKAAE
Trigger: TTCTGCCGCTTTATCTTTCCCGCCTCCCGGCAGGCAGGCCGTTAACCGTCTTCCGGAAGACGCTGCTAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000421915.5
ENST00000453161.5
CDS CCA 72 bp GACGAGAGTGCACATGGTGGTAGAGAAGCACAGCTTTaGCCCCATAGATGGCCGGGTGCAGGACGGCATCAG +
Preference number: 6 (lower is better)
Translates to: DESAHGGREAQL*PHRWPGAGRHQ
Trigger: CTGATGCCGTCCTGCACCCGGCCATCTATGGGGCCAAAGCTGTGCTTCTCTACCACCATGTGCACTCTCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp CCAGCCTCTGTCCTCACAAGTACTGAGCGGACATTCTaGTGTTGCTCCCCTGAGCCCTGGAAGGGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: PASVLTSTERTF*CCSPEPWKGWF
Trigger: GAACCAGCCCTTCCAGGGCTCAGGGGAGCAACACCAGAATGTCCGCTCAGTACTTGTGAGGACAGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451003.5
CDS GCA 72 bp GCTACCACCGGCACTTGTGCCGGTGCTAAAACTTCGTaGCCGACTCAAGGTGTTTTCGGAGCAGGAGACAGG +
Preference number: 6 (lower is better)
Translates to: ATTGTCAGAKTS*PTQGVFGAGDR
Trigger: CCTGTCTCCTGCTCCGAAAACACCTTGAGTCGGGCACGAAGTTTTAGCACCGGCACAAGTGCCGGTGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS CCA 72 bp GGGCTGCTATGGGTAGGGTGGTTCTCCGGAAAGCGCTaGTCTAGCTGGTTTAGCAGTTCCTGGCAGTCACTG +
Preference number: 6 (lower is better)
Translates to: GLLWVGWFSGKR*SSWFSSSWQSL
Trigger: CAGTGACTGCCAGGAACTGCTAAACCAGCTAGACCAGCGCTTTCCGGAGAACCACCCTACCCATAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp GGAATCAGCTTAAAGACGAAGAGGCGACGGAGGGTTTaGGCCCGGGGATCATCAGGTCGGAGGATGAAGTCC +
Preference number: 6 (lower is better)
Translates to: GISLKTKRRRRV*ARGSSGRRMKS
Trigger: GGACTTCATCCTCCGACCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCTCTTCGTCTTTAAGCTGATTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp CATGGTGGTAGAGAAGCACAGCTTTGGCCCCATAGATaGCCGGGTGCAGGACGGCATCAGGCTTCAGGTACT +
Preference number: 6 (lower is better)
Translates to: HGGREAQLWPHR*PGAGRHQASGT
Trigger: AGTACCTGAAGCCTGATGCCGTCCTGCACCCGGCCATCTATGGGGCCAAAGCTGTGCTTCTCTACCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CAA 72 bp GGGAATCAGCTTAAAGACGAAGAGGCGACGGAGGGTTaGGGCCCGGGGATCATCAGGTCGGAGGATGAAGTC +
Preference number: 6 (lower is better)
Translates to: GNQLKDEEATEG*GPGIIRSEDEV
Trigger: GACTTCATCCTCCGACCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCTCTTCGTCTTTAAGCTGATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 72 bp CCACGTGGGCTAGATTCCCTGAATCAAAGCGAGAACTaGACAGCAATCCCCCACAGCGCAGCTCCATGGTGG +
Preference number: 6 (lower is better)
Translates to: PRGLDSLNQSEN*TAIPHSAAPWW
Trigger: CCACCATGGAGCTGCGCTGTGGGGGATTGCTGTTCAGTTCTCGCTTTGATTCAGGGAATCTAGCCCACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000421915.5
ENST00000437006.1
ENST00000451003.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 72 bp ATGGCCGGGTGCAGGACGGCATCAGGCTTCAGGTACTaGCGGTTCAGATTCACTCCACGTGAGTCTGTGCAT +
Preference number: 6 (lower is better)
Translates to: MAGCRTASGFRY*RFRFTPRESVH
Trigger: ATGCACAGACTCACGTGGAGTGAATCTGAACCGTCAGTACCTGAAGCCTGATGCCGTCCTGCACCCGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477136.5
CDS GCA 72 bp CGGAATGGTCGAGGGGTGCTGGTATCAGGAAATAGCTaGTCTAGACGGGGCTCTCGATCTTCTCGAAGCCCA +
Preference number: 6 (lower is better)
Translates to: RNGRGVLVSGNS*SRRGSRSSRSP
Trigger: TGGGCTTCGAGAAGATCGAGAGCCCCGTCTAGAGCAGCTATTTCCTGATACCAGCACCCCTCGACCATTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp CGGGTGGGCAGTGTGCGCACAAAGGGGGCCATGCCCTaGGAATACAGCTTGCTCTGCTTGTTCATGTTCATA +
Preference number: 6 (lower is better)
Translates to: RVGSVRTKGAMP*EYSLLCLFMFI
Trigger: TATGAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGCGCACACTGCCCACCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp TCCTCTTGCCTGCGAAACGGAATGGTCGAGGGGTGCTaGTATCAGGAAATAGCTGCTCTAGACGGGGCTCTC +
Preference number: 6 (lower is better)
Translates to: SSCLRNGMVEGC*YQEIAALDGAL
Trigger: GAGAGCCCCGTCTAGAGCAGCTATTTCCTGATACCAGCACCCCTCGACCATTCCGTTTCGCAGGCAAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp CCCCTGGTCTCCCAACTAGGCTTAAAGAACCTGGCCTaGCCATGGAGGAGGCTGGCAAACCCAGATTTCAGT +
Preference number: 6 (lower is better)
Translates to: PLVSQLGLKNLA*PWRRLANPDFS
Trigger: ACTGAAATCTGGGTTTGCCAGCCTCCTCCATGGCCAGGCCAGGTTCTTTAAGCCTAGTTGGGAGACCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441931.1
CDS CAA 90 bp GTTCAACATGGGAATCAGCTTAAAGACGAAGAGGCGACGGAGGGTTaGGGCCCGGGGATCATCAGGTCGGAGGATGAAGTCCAGAAAGCC +
Preference number: 6 (lower is better)
Translates to: VQHGNQLKDEEATEG*GPGIIRSEDEVQKA
Trigger: GGCTTTCTGGACTTCATCCTCCGACCTGATGATCCCCGGGCCCAAACCCTCCGTCGCCTCTTCGTCTTTAAGCTGATTCCCATGTTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CAA 90 bp CTCCCTGGTATGTTGAATGAATCAGGCAGTAGACAGGAGCCCAGCTaGTGTGAGGAGGCTGGGCCAGAACTAGTAGGAGCTGGGGATGGA +
Preference number: 6 (lower is better)
Translates to: LPGMLNESGSRQEPS*CEEAGPELVGAGDG
Trigger: TCCATCCCCAGCTCCTACTAGTTCTGGCCCAGCCTCCTCACACAAGCTGGGCTCCTGTCTACTGCCTGATTCATTCAACATACCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS CAA 90 bp TGCCGGGAGGCGGGAAAGATAAAGCGGCAGAAACTGGGACTCAACTaGAACACAGGCCAGTTCTCCTGCCCAGCAGTCCTAAGACTTTGG +
Preference number: 6 (lower is better)
Translates to: CREAGKIKRQKLGLN*NTGQFSCPAVLRLW
Trigger: CCAAAGTCTTAGGACTGCTGGGCAGGAGAACTGGCCTGTGTTCAAGTTGAGTCCCAGTTTCTGCCGCTTTATCTTTCCCGCCTCCCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421915.5
CDS TCA 72 bp GGGGCTCTCGATCTTCTCGAAGCCCATGGCAGGAAGTaGTCGTCAGCAGATCTACACGAAGTCCATCCAGAG +
Preference number: 6 (lower is better)
Translates to: GALDLLEAHGRK*SSADLHEVHPE
Trigger: CTCTGGATGGACTTCGTGTAGATCTGCTGACGATCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 72 bp GACTTTTGGGTGGAGTTCGAAGGCCCCTCTTCTTGTTaGCACCCACATTCAGAGTGCTGCTTAGGCCTCGGC +
Preference number: 6 (lower is better)
Translates to: DFWVEFEGPSSC*HPHSECCLGLG
Trigger: GCCGAGGCCTAAGCAGCACTCTGAATGTGGGTGTCAACAAGAAGAGGGGCCTTCGAACTCCACCCAAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS CCA 72 bp GGAGCAGGAGACAGGCAACCCATTGTGACTTTTGGGTaGAGTTCGAAGGCCCCTCTTCTTGTTGACACCCAC +
Preference number: 6 (lower is better)
Translates to: GAGDRQPIVTFG*SSKAPLLVDTH
Trigger: GTGGGTGTCAACAAGAAGAGGGGCCTTCGAACTCCACCCAAAAGTCACAATGGGTTGCCTGTCTCCTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS CAA 90 bp AGACCTGGTATGTTGAATGAATCAGGCAGTAGACAGGAGCCCAGCTaGTGTGAGGAGGCTGGGCCAGAACTAGTAGGAGCTGGGGATGGA +
Preference number: 6 (lower is better)
Translates to: RPGMLNESGSRQEPS*CEEAGPELVGAGDG
Trigger: TCCATCCCCAGCTCCTACTAGTTCTGGCCCAGCCTCCTCACACAAGCTGGGCTCCTGTCTACTGCCTGATTCATTCAACATACCAGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441931.1
CDS TCA 72 bp GAGCTCCAGTCCCTAGCAGACCTTTCCCGATTACCATaGCAGCCTCTGGTTTGTCTCCAGAGGACAAGAGTG +
Preference number: 6 (lower is better)
Translates to: ELQSLADLSRLP*QPLVCLQRTRV
Trigger: CACTCTTGTCCTCTGGAGACAAACCAGAGGCTGTCATGGTAATCGGGAAAGGTCTGCTAGGGACTGGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS TCA 72 bp GGTGCAAGAGGACTGGGAACACAGAAGCCAGAAGGCTaGCAGAATTTCACTGAGATGCAGGGCATGAGGGGA +
Preference number: 6 (lower is better)
Translates to: GARGLGTQKPEG*QNFTEMQGMRG
Trigger: TCCCCTCATGCCCTGCATCTCAGTGAAATTCTGTCAGCCTTCTGGCTTCTGTGTTCCCAGTCCTCTTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477136.5
CDS GCA 72 bp AAACTGGGACTCAACTTGAACACAGGCCAGTTCTCCTaGCCAGCAGTCCTAAGACTTTGGCCCTTTGCCAGG +
Preference number: 6 (lower is better)
Translates to: KLGLNLNTGQFS*PAVLRLWPFAR
Trigger: CCTGGCAAAGGGCCAAAGTCTTAGGACTGCTGGGCAGGAGAACTGGCCTGTGTTCAAGTTGAGTCCCAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421915.5
CDS CCA 72 bp TGCTCTAGACGGGGCTCTCGATCTTCTCGAAGCCCATaGCAGGAAGTGATCGTCAGCAGATCTACACGAAGT +
Preference number: 6 (lower is better)
Translates to: CSRRGSRSSRSP*QEVIVSRSTRS
Trigger: ACTTCGTGTAGATCTGCTGACGATCACTTCCTGCCATGGGCTTCGAGAAGATCGAGAGCCCCGTCTAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CAA 72 bp CACAGGCCAGTTCTCCTGCCCAGCAGTCCTAAGACTTaGGCCCTTTGCCAGGTAGTTTCTCTTCTCCAGGAA +
Preference number: 6 (lower is better)
Translates to: HRPVLLPSSPKT*ALCQVVSLLQE
Trigger: TTCCTGGAGAAGAGAAACTACCTGGCAAAGGGCCAAAGTCTTAGGACTGCTGGGCAGGAGAACTGGCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421915.5
CDS CAA 72 bp GCGGGAAAGATAAAGCGGCAGAAACTGGGACTCAACTaGAACACAGGCCAGTTCTCCTGCCCAGCAGTCCTA +
Preference number: 6 (lower is better)
Translates to: AGKIKRQKLGLN*NTGQFSCPAVL
Trigger: TAGGACTGCTGGGCAGGAGAACTGGCCTGTGTTCAAGTTGAGTCCCAGTTTCTGCCGCTTTATCTTTCCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000421915.5
CDS CAA 90 bp CCAGTCCCTAGCAGACCTTTCCCGATTACCATGACAGCCTCTGGTTaGTCTCCAGAGGACAAGAGTGAGCAACTGCTCCCTGGTATGTTG +
Preference number: 6 (lower is better)
Translates to: PVPSRPFPITMTASG*SPEDKSEQLLPGML
Trigger: CAACATACCAGGGAGCAGTTGCTCACTCTTGTCCTCTGGAGACAAACCAGAGGCTGTCATGGTAATCGGGAAAGGTCTGCTAGGGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS TCA 72 bp ATTCCGTTTCAGCACAGTCTGGTCGGGTCCACACGTTaGATTCATAGTCAGGGGAAGAGGCAATGCCACTGG +
Preference number: 6 (lower is better)
Translates to: IPFQHSLVGSTR*IHSQGKRQCHW
Trigger: CCAGTGGCATTGCCTCTTCCCCTGACTATGAATTCAACGTGTGGACCCGACCAGACTGTGCTGAAACGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 72 bp AAGAAGGTGGTGGCCCCACGGCCCTCCACGAAACGATaGACAAAGGATAACACAAACTGCGTCTCTGTCATC +
Preference number: 6 (lower is better)
Translates to: KKVVAPRPSTKR*TKDNTNCVSVI
Trigger: GATGACAGAGACGCAGTTTGTGTTATCCTTTGTTCATCGTTTCGTGGAGGGCCGTGGGGCCACCACCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp TGCCTCCACCCAGATGGGCCTGCAGTCATCCTAGTTTaGTTCCTTTCTGGGAGTGCCACTAGATATGATCTC +
Preference number: 6 (lower is better)
Translates to: CLHPDGPAVILV*FLSGSATRYDL
Trigger: GAGATCATATCTAGTGGCACTCCCAGAAAGGAACCAAACTAGGATGACTGCAGGCCCATCTGGGTGGAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477136.5
CDS CAA 72 bp ACACCCACATTCAGAGTGCTGCTTAGGCCTCGGCTGTaGCGTACATGTTTCAGCATCCAGGCCCGTAGATTA +
Preference number: 6 (lower is better)
Translates to: TPTFRVLLRPRL*RTCFSIQARRL
Trigger: TAATCTACGGGCCTGGATGCTGAAACATGTACGCAACAGCCGAGGCCTAAGCAGCACTCTGAATGTGGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS CAA 72 bp AGCAGACCTTTCCCGATTACCATGACAGCCTCTGGTTaGTCTCCAGAGGACAAGAGTGAGCAACTGCTCCCT +
Preference number: 6 (lower is better)
Translates to: SRPFPITMTASG*SPEDKSEQLLP
Trigger: AGGGAGCAGTTGCTCACTCTTGTCCTCTGGAGACAAACCAGAGGCTGTCATGGTAATCGGGAAAGGTCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360131.5
ENST00000487078.5
CDS CAA 90 bp CTGGCAAACCCAGATTTCAGTGGCAGTGGGTACAGACCTGGTATGTaGAATGAATCAGGCAGTAGACAGGAGCCCAGCTTGTGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: LANPDFSGSGYRPGM*NESGSRQEPSLCEE
Trigger: CTCCTCACACAAGCTGGGCTCCTGTCTACTGCCTGATTCATTCAACATACCAGGTCTGTACCCACTGCCACTGAAATCTGGGTTTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441931.1
CDS CAA 90 bp TTCTTGTTGACACCCACATTCAGAGTGCTGCTTAGGCCTCGGCTGTaGCGTACATGTTTCAGCATCCAGGCCCGTAGATTAGTAAGGCTG +
Preference number: 6 (lower is better)
Translates to: FLLTPTFRVLLRPRL*RTCFSIQARRLVRL
Trigger: CAGCCTTACTAATCTACGGGCCTGGATGCTGAAACATGTACGCAACAGCCGAGGCCTAAGCAGCACTCTGAATGTGGGTGTCAACAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS TCA 72 bp GCTTCAGCGTTATGCCTGTCAGCTGAGTGCCCACACTaGGCTTCATTTTGGAGATTGTTGGCTTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ASALCLSAECPH*ASFWRLLAFSR
Trigger: CCTGGAGAAAGCCAACAATCTCCAAAATGAAGCTCAGTGTGGGCACTCAGCTGACAGGCATAACGCTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS TCA 72 bp TATATCTCAGCTTCCACCCAACCTGTGGATTATCCCTaGGGCTTTGTAGATTGCAACACGGCCGCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: YISASTQPVDYP*GFVDCNTAASL
Trigger: GAGGGAAGCGGCCGTGTTGCAATCTACAAAGCCTCAGGGATAATCCACAGGTTGGGTGGAAGCTGAGATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477136.5
CDS GCA 72 bp TTCAGCATCCAGGCCCGTAGATTAGTAAGGCTGCTGTaGTCTGACAGTACAATTCGGGGCCACGGATTACAT +
Preference number: 6 (lower is better)
Translates to: FSIQARRLVRLL*SDSTIRGHGLH
Trigger: ATGTAATCCGTGGCCCCGAATTGTACTGTCAGAGCACAGCAGCCTTACTAATCTACGGGCCTGGATGCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS GCA 72 bp AACAGTATATCTTCAAGCTCTTACTTCCCCCAGCAATaGCCCAGACAACCGAACACATGTTGCAGGGGCTCC +
Preference number: 6 (lower is better)
Translates to: NSISSSSYFPQQ*PRQPNTCCRGS
Trigger: GGAGCCCCTGCAACATGTGTTCGGTTGTCTGGGGCATTGCTGGGGGAAGTAAGAGCTTGAAGATATACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000323064.12
CDS CCA 72 bp GGCCCTTTGCCAGGTAGTTTCTCTTCTCCAGGAAGATaGTCATGGTTAATTGCCACTAGGAGAGCAAGGGGT +
Preference number: 6 (lower is better)
Translates to: GPLPGSFSSPGR*SWLIATRRARG
Trigger: ACCCCTTGCTCTCCTAGTGGCAATTAACCATGACCATCTTCCTGGAGAAGAGAAACTACCTGGCAAAGGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421915.5
CDS CAA 72 bp CCAGATTTCAGTGGCAGTGGGTACAGACCTGGTATGTaGAATGAATCAGGCAGTAGACAGGAGCCCAGCTTG +
Preference number: 6 (lower is better)
Translates to: PDFSGSGYRPGM*NESGSRQEPSL
Trigger: CAAGCTGGGCTCCTGTCTACTGCCTGATTCATTCAACATACCAGGTCTGTACCCACTGCCACTGAAATCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441931.1
CDS CAA 90 bp TGGCCATCTCTACGGTCTCGGGCATACATATTCTTCTCTGAGAAATaGCAGCCCTGGAAGTCGAAGTGGGCTGAATTCAAGGAGATGAGC +
Preference number: 6 (lower is better)
Translates to: WPSLRSRAYIFFSEK*QPWKSKWAEFKEMS
Trigger: GCTCATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGAATATGTATGCCCGAGACCGTAGAGATGGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
CDS TCA 72 bp AGCCCTGGAAGTCGAAGTGGGCTGAATTCAAGGAGATaGGCTTTGGATATAGCATGTTTTCCACCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: SPGSRSGLNSRR*ALDIACFPPGC
Trigger: GCACCCAGGTGGAAAACATGCTATATCCAAAGCTCATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
CDS TCA 72 bp GTAGTTGCATTCAAGTGTGTAGCTGTGGATTATCCCTaGGGCTTTGTAGATTGCAACACGGCCGCTTCCCTC +
Preference number: 6 (lower is better)
Translates to: VVAFKCVAVDYP*GFVDCNTAASL
Trigger: GAGGGAAGCGGCCGTGTTGCAATCTACAAAGCCTCAGGGATAATCCACAGCTACACACTTGAATGCAACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS TCA 72 bp CCCATTGTCATGGCAGGCAGCAGGGATGCTGTTTACTaGGCGTCCAGTGTTGTAGTTGCATTCAAGTGTGTA +
Preference number: 6 (lower is better)
Translates to: PIVMAGSRDAVY*ASSVVVAFKCV
Trigger: TACACACTTGAATGCAACTACAACACTGGACGCTCAGTAAACAGCATCCCTGCTGCCTGCCATGACAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS TCA 72 bp CAGATTTCAGTGGCAGTGGGTACAGACCTGGTATGTTaGATGAATCAGGCAGTAGACAGGAGCCCAGCTTGT +
Preference number: 6 (lower is better)
Translates to: QISVAVGTDLVC*MNQAVDRSPAC
Trigger: ACAAGCTGGGCTCCTGTCTACTGCCTGATTCATTCAACATACCAGGTCTGTACCCACTGCCACTGAAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441931.1
CDS CCA 72 bp TCCCCATCACTGGACAAAGATTCCACCTTCTCCACGTaGGCTAGATTCCCTGAATCAAAGCGAGAACTGAAC +
Preference number: 6 (lower is better)
Translates to: SPSLDKDSTFST*ARFPESKRELN
Trigger: GTTCAGTTCTCGCTTTGATTCAGGGAATCTAGCCCACGTGGAGAAGGTGGAATCTTTGTCCAGTGATGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000421915.5
ENST00000451003.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CCA 72 bp CCTGTTCCCATTCTCAAATTCCGTTTCAGCACAGTCTaGTCGGGTCCACACGTTGAATTCATAGTCAGGGGA +
Preference number: 6 (lower is better)
Translates to: PVPILKFRFSTV*SGPHVEFIVRG
Trigger: TCCCCTGACTATGAATTCAACGTGTGGACCCGACCAGACTGTGCTGAAACGGAATTTGAGAATGGGAACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CAA 90 bp GTGGGCAGTGTGCGCACAAAGGGGGCCATGCCCTGGGAATACAGCTaGCTCTGCTTGTTCATGTTCATAATGTTGATCTTGATGAGTTTT +
Preference number: 6 (lower is better)
Translates to: VGSVRTKGAMPWEYS*LCLFMFIMLILMSF
Trigger: AAAACTCATCAAGATCAACATTATGAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGCGCACACTGCCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 72 bp TACGGTCTCGGGCATACATATTCTTCTCTGAGAAATTaGAGCCCTGGAAGTCGAAGTGGGCTGAATTCAAGG +
Preference number: 6 (lower is better)
Translates to: YGLGHTYSSLRN*SPGSRSGLNSR
Trigger: CCTTGAATTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGAATATGTATGCCCGAGACCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
CDS GCA 72 bp CAGGGATGCTGTTTACTGAGCGTCCAGTGTTGTAGTTaGATTCAAGTGTGTAGCTGTGGATTATCCCTGAGG +
Preference number: 6 (lower is better)
Translates to: QGCCLLSVQCCS*IQVCSCGLSLR
Trigger: CCTCAGGGATAATCCACAGCTACACACTTGAATGCAACTACAACACTGGACGCTCAGTAAACAGCATCCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000487078.5
CDS CCA 72 bp TTGCCAGGTAGTTTCTCTTCTCCAGGAAGATGGTCATaGTTAATTGCCACTAGGAGAGCAAGGGGTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LPGSFSSPGRWS*LIATRRARGLL
Trigger: AAGCAGACCCCTTGCTCTCCTAGTGGCAATTAACCATGACCATCTTCCTGGAGAAGAGAAACTACCTGGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000421915.5
CDS CAA 90 bp ATGCCCTGGGAATACAGCTTGCTCTGCTTGTTCATGTTCATAATGTaGATCTTGATGAGTTTTCCTGGCATTCCTCCCCGGACGCTGAAG +
Preference number: 6 (lower is better)
Translates to: MPWEYSLLCLFMFIM*ILMSFPGIPPRTLK
Trigger: CTTCAGCGTCCGGGGAGGAATGCCAGGAAAACTCATCAAGATCAACATTATGAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CAA 90 bp GTGCGCACAAAGGGGGCCATGCCCTGGGAATACAGCTTGCTCTGCTaGTTCATGTTCATAATGTTGATCTTGATGAGTTTTCCTGGCATT +
Preference number: 6 (lower is better)
Translates to: VRTKGAMPWEYSLLC*FMFIMLILMSFPGI
Trigger: AATGCCAGGAAAACTCATCAAGATCAACATTATGAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGTGCGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS CAA 90 bp GCCACTAGATATGATCTCATGCTTTCTCAGGAAGATGAGATGGGCTaGCCTTTATTAGGGTGCAAGAGGACTGGGAACACAGAAGCCAGA +
Preference number: 6 (lower is better)
Translates to: ATRYDLMLSQEDEMG*PLLGCKRTGNTEAR
Trigger: TCTGGCTTCTGTGTTCCCAGTCCTCTTGCACCCTAATAAAGGCAAGCCCATCTCATCTTCCTGAGAAAGCATGAGATCATATCTAGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477136.5
CDS TCA 72 bp TGTTTGTTTCCAGGCTTCAGCGTTATGCCTGTCAGCTaGGTGCCCACACTGAGCTTCATTTTGGAGATTGTT +
Preference number: 6 (lower is better)
Translates to: CLFPGFSVMPVS*VPTLSFILEIV
Trigger: AACAATCTCCAAAATGAAGCTCAGTGTGGGCACTCAGCTGACAGGCATAACGCTGAAGCCTGGAAACAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 72 bp TTGTGGCATAATCCACACACTGTTGAGCTTCTGTTCTaGTGGCTCTGTTTGTTTCCAGGCTTCAGCGTTATG +
Preference number: 6 (lower is better)
Translates to: LWHNPHTVELLF*WLCLFPGFSVM
Trigger: CATAACGCTGAAGCCTGGAAACAAACAGAGCCAGCAGAACAGAAGCTCAACAGTGTGTGGATTATGCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 72 bp ACAAAGGGGGCCATGCCCTGGGAATACAGCTTGCTCTaGTTGTTCATGTTCATAATGTTGATCTTGATGAGT +
Preference number: 6 (lower is better)
Translates to: TKGAMPWEYSLL*LFMFIMLILMS
Trigger: ACTCATCAAGATCAACATTATGAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5
CDS GCA 72 bp GGTTCCTTTCTGGGAGTGCCACTAGATATGATCTCATaGTTTCTCAGGAAGATGAGATGGGCTTGCCTTTAT +
Preference number: 6 (lower is better)
Translates to: GSFLGVPLDMIS*FLRKMRWACLY
Trigger: ATAAAGGCAAGCCCATCTCATCTTCCTGAGAAAGCATGAGATCATATCTAGTGGCACTCCCAGAAAGGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477136.5
CDS CCA 72 bp TTCTTCTCTGAGAAATTGCAGCCCTGGAAGTCGAAGTaGGCTGAATTCAAGGAGATGAGCTTTGGATATAGC +
Preference number: 6 (lower is better)
Translates to: FFSEKLQPWKSK*AEFKEMSFGYS
Trigger: GCTATATCCAAAGCTCATCTCCTTGAATTCAGCCCACTTCGACTTCCAGGGCTGCAATTTCTCAGAGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000477136.5
ENST00000487078.5
CDS CCA 72 bp TTCTCACACTCACATGACATTCTTAGGATTCCCACCTaGGTGCTCTCATCACTAAAGCTGTTTCCGTACATG +
Preference number: 6 (lower is better)
Translates to: FSHSHDILRIPT*VLSSLKLFPYM
Trigger: CATGTACGGAAACAGCTTTAGTGATGAGAGCACCCAGGTGGGAATCCTAAGAATGTCATGTGAGTGTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489683.5
CDS CAA 72 bp AAGGGGGCCATGCCCTGGGAATACAGCTTGCTCTGCTaGTTCATGTTCATAATGTTGATCTTGATGAGTTTT +
Preference number: 6 (lower is better)
Translates to: KGAMPWEYSLLC*FMFIMLILMSF
Trigger: AAAACTCATCAAGATCAACATTATGAACATGAACAAGCAGAGCAAGCTGTATTCCCAGGGCATGGCCCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000323064.12
ENST00000360131.5
ENST00000453161.5
ENST00000477136.5
ENST00000487078.5
ENST00000489683.5