RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGBL4 (Homo sapiens)

Ensembl gene IDs: ENSG00000186094

Ensembl transcript IDs: ENST00000334103.11, ENST00000371836.1, ENST00000371838.5, ENST00000371839.6, ENST00000416121.5, ENST00000497451.1

Found 497 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTCCAACAGGATGTGGAACATTGCTCTAACACCTGGCCTACCCCCTaGCAGCCCCTCCTTCTAGGGCCATTGCCCTACTTCCGATGTTCC +
Preference number: 1 (lower is better)
Translates to: VQQDVEHCSNTWPTP*QPLLLGPLPYFRCS
Trigger: GGAACATCGGAAGTAGGGCAATGGCCCTAGAAGGAGGGGCTGTCAGGGGGTAGGCCAGGTGTTAGAGCAATGTTCCACATCCTGTTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR GCA 90 bp GCCAGCTTCCACAGTAGCAACAGGACTGGAAGCCCAGCCTGGTGCTaGAGCTTTGGCCTCCCTCCCACACATCCTGATATGTCAGGAATA +
Preference number: 1 (lower is better)
Translates to: ASFHSSNRTGSPAWC*SFGLPPTHPDMSGI
Trigger: TATTCCTGACATATCAGGATGTGTGGGAGGGAGGCCAAAGCTGCAGCACCAGGCTGGGCTTCCAGTCCTGTTGCTACTGTGGAAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR CCA 90 bp TGGCAGGAGACTCACTGCATCATGAGAGAAGAGAGGGGAGAGAGATaGAAGCAGAGTAAGATATGGGCAGGCCATGGGTCCGGCTGGCCT +
Preference number: 1 (lower is better)
Translates to: WQETHCIMREERGER*KQSKIWAGHGSGWP
Trigger: AGGCCAGCCGGACCCATGGCCTGCCCATATCTTACTCTGCTTCCATCTCTCTCCCCTCTCTTCTCTCATGATGCAGTGAGTCTCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp GGCATGAAGAGGGGCAATGTGGCACATAACAGGTGGCCAGGACTTTaGAACCCACAGACCCTCTTCCTCAGAGCAGAGCCTACTCCCTTG +
Preference number: 1 (lower is better)
Translates to: GMKRGNVAHNRWPGL*NPQTLFLRAEPTPL
Trigger: CAAGGGAGTAGGCTCTGCTCTGAGGAAGAGGGTCTGTGGGTTCCAAAGTCCTGGCCACCTGTTATGTGCCACATTGCCCCTCTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp GAGAGATGGAAGCAGAGTAAGATATGGGCAGGCCATGGGTCCGGCTaGCCTGGGAAAGATTTGGAGCATGGCAATTGGGGTAGGAGTATC +
Preference number: 1 (lower is better)
Translates to: ERWKQSKIWAGHGSG*PGKDLEHGNWGRSI
Trigger: GATACTCCTACCCCAATTGCCATGCTCCAAATCTTTCCCAGGCCAGCCGGACCCATGGCCTGCCCATATCTTACTCTGCTTCCATCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp ATCATGAGAGAAGAGAGGGGAGAGAGATGGAAGCAGAGTAAGATATaGGCAGGCCATGGGTCCGGCTGGCCTGGGAAAGATTTGGAGCAT +
Preference number: 1 (lower is better)
Translates to: IMREERGERWKQSKI*AGHGSGWPGKDLEH
Trigger: ATGCTCCAAATCTTTCCCAGGCCAGCCGGACCCATGGCCTGCCCATATCTTACTCTGCTTCCATCTCTCTCCCCTCTCTTCTCTCATGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp GGAACTCTCAGTTCCAATCATAATATCTCTGTGTCCAACAGGATGTaGAACATTGCTCTAACACCTGGCCTACCCCCTGACAGCCCCTCC +
Preference number: 1 (lower is better)
Translates to: GTLSSNHNISVSNRM*NIALTPGLPPDSPS
Trigger: GGAGGGGCTGTCAGGGGGTAGGCCAGGTGTTAGAGCAATGTTCCACATCCTGTTGGACACAGAGATATTATGATTGGAACTGAGAGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp GATTCTGGAGAAGGCATAGGCCATATGCATCATCTAAGGTGTGTATaGGGCATGAAGAGGGGCAATGTGGCACATAACAGGTGGCCAGGA +
Preference number: 1 (lower is better)
Translates to: DSGEGIGHMHHLRCV*GMKRGNVAHNRWPG
Trigger: TCCTGGCCACCTGTTATGTGCCACATTGCCCCTCTTCATGCCCCATACACACCTTAGATGATGCATATGGCCTATGCCTTCTCCAGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp CATGGCAATTGGGGTAGGAGTATCATACTAAGGGCTGAGGCAAACTaGACAATCCAAAGACGCCACCAGAAGAAGAAGCACCTCCATCCT +
Preference number: 1 (lower is better)
Translates to: HGNWGRSIILRAEAN*TIQRRHQKKKHLHP
Trigger: AGGATGGAGGTGCTTCTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGATACTCCTACCCCAATTGCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp CCAAAACTGAATCCACTATTTGTGAGAGGTTGCAGGAAAAGAGATTaGGAGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCC +
Preference number: 1 (lower is better)
Translates to: PKLNPLFVRGCRKRD*EKVLGSAGFREEQA
Trigger: GGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCCAATCTCTTTTCCTGCAACCTCTCACAAATAGTGGATTCAGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
3UTR CCA 90 bp TGTCTAACTTGCCACACTGATGAGCTTGAGTTCTCCCAACAGCTTTaGTCAACTAGAATCCCAGCTGACCATACAGGCTGGCTCTTTGCT +
Preference number: 1 (lower is better)
Translates to: CLTCHTDELEFSQQL*STRIPADHTGWLFA
Trigger: AGCAAAGAGCCAGCCTGTATGGTCAGCTGGGATTCTAGTTGACCAAAGCTGTTGGGAGAACTCAAGCTCATCAGTGTGGCAAGTTAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR GCA 90 bp AGAGCCACTAAGTTGCAGTTGGCTGGTGGGACTAGCCCTAAGTCATaGCACGTTCAGAAAAGATGTTTTCCTGCACAGAGGAATTCCATA +
Preference number: 1 (lower is better)
Translates to: RATKLQLAGGTSPKS*HVQKRCFPAQRNSI
Trigger: TATGGAATTCCTCTGTGCAGGAAAACATCTTTTCTGAACGTGGCATGACTTAGGGCTAGTCCCACCAGCCAACTGCAACTTAGTGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp TCCTGGTATGTACTAATGCTGTGTTTACTTTTGATAAATGAGTGTTaGCTGTTGAGGGGTGGAAACCTTGGGCCTGAACCAAGGGTGGGC +
Preference number: 1 (lower is better)
Translates to: SWYVLMLCLLLINEC*LLRGGNLGPEPRVG
Trigger: GCCCACCCTTGGTTCAGGCCCAAGGTTTCCACCCCTCAACAGCCAACACTCATTTATCAAAAGTAAACACAGCATTAGTACATACCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp ATGTGGAATGAAGCATATGCATGTGTTATAGGAGTTAGCAGATTCTaGAGAAGGCATAGGCCATATGCATCATCTAAGGTGTGTATGGGG +
Preference number: 1 (lower is better)
Translates to: MWNEAYACVIGVSRF*RRHRPYASSKVCMG
Trigger: CCCCATACACACCTTAGATGATGCATATGGCCTATGCCTTCTCCAGAATCTGCTAACTCCTATAACACATGCATATGCTTCATTCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 90 bp AAGTCTTCTCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTaGTCTTGGCCTGGATTATTTCTCACCTGGATTTTTATAACAGCC +
Preference number: 1 (lower is better)
Translates to: KSSQFHILSILQPPL*SWPGLFLTWIFITA
Trigger: GGCTGTTATAAAAATCCAGGTGAGAAATAATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGAGAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp GGCCTCCTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCGATATGGGCAGGCCATaGGTCCGGCTGGCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: GLLWRDPHLTMNKGCRIPDMGRP*VRLAWE
Trigger: TTCCCAGGCCAGCCGGACCCATGGCCTGCCCATATC...GGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAGGAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp GGCCTCCTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTCCTGGCAAGGTACCTaGACACCATACCCCCAACCC +
Preference number: 2 (lower is better)
Translates to: GLLWRDPHLTMNKGCRIPSWQGT*TPYPQP
Trigger: GGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGA...GGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAGGAGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR TCA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCCTGGGAAATCTTCCCTaGCTCCTAGGACTGCGTGTG +
Preference number: 2 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLLGNLP*LLGLRV
Trigger: CACACGCAGTCCTAGGAGTCAGGGAAGATTTCCCAG...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR TCA 90 bp AGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGGGCAGGGGAATCGCTTaGACCCAGGAGGCAGAAGTT +
Preference number: 2 (lower is better)
Translates to: RTEQGRVGPSVSRPAQLVGRGIA*TQEAEV
Trigger: AACTTCTGCCTCCTGGGTTCAAGCGATTCCCCTGCC...CACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp AGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGTGGGTCCGGCTGGCCTaGGAAAGATTTGGAGCATGG +
Preference number: 2 (lower is better)
Translates to: RTEQGRVGPSVSRPAQLVWVRLA*ERFGAW
Trigger: CCATGCTCCAAATCTTTCCCAGGCCAGCCGGACCCA...CACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 90 bp AACCCACAGACCCTCTTCCTCAGAGCAGAGCCTACTCCCTTGGCCTaGCTGAGTCAGGTGGGTATTAAAGCAGACTGCAAGATGACCCTC +
Preference number: 2 (lower is better)
Translates to: NPQTLFLRAEPTPLA*LSQVGIKADCKMTL
Trigger: GAGGGTCATCTTGCAGTCTGCTTTAATACCCACCTGACTCAGCAAGGCCAAGGGAGTAGGCTCTGCTCTGAGGAAGAGGGTCTGTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp GGATCAAGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCGGCCATGGGTCCGGCTaGCCTGGGAAAGATTTGGAG +
Preference number: 2 (lower is better)
Translates to: GSRKAESATICYSSDAVTGHGSG*PGKDLE
Trigger: CTCCAAATCTTTCCCAGGCCAGCCGGACCCATGGCC...GGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 90 bp AGTAAGATATGGGCAGGCCATGGGTCCGGCTGGCCTGGGAAAGATTaGGAGCATGGCAATTGGGGTAGGAGTATCATACTAAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SKIWAGHGSGWPGKD*EHGNWGRSIILRAE
Trigger: CTCAGCCCTTAGTATGATACTCCTACCCCAATTGCCATGCTCCAAATCTTTCCCAGGCCAGCCGGACCCATGGCCTGCCCATATCTTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 90 bp CTTTGGAACCCACAGACCCTCTTCCTCAGAGCAGAGCCTACTCCCTaGGCCTTGCTGAGTCAGGTGGGTATTAAAGCAGACTGCAAGATG +
Preference number: 2 (lower is better)
Translates to: LWNPQTLFLRAEPTP*ALLSQVGIKADCKM
Trigger: CATCTTGCAGTCTGCTTTAATACCCACCTGACTCAGCAAGGCCAAGGGAGTAGGCTCTGCTCTGAGGAAGAGGGTCTGTGGGTTCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAGGCCTGGGAAAGATTTaGAGCATGGCAATTGGGGTA +
Preference number: 2 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQGLGKI*SMAIGV
Trigger: TACCCCAATTGCCATGCTCCAAATCTTTCCCAGGCC...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp GCATTGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTCCTCTTCTCATCCTCAAGCAGAGTAAGATATaGGCAGGCCATGGGTCCGGC +
Preference number: 2 (lower is better)
Translates to: ALNRPELPWCSLFPLLILKQSKI*AGHGSG
Trigger: GCCGGACCCATGGCCTGCCCATATCTTACTCTGCTT...GAGGATGAGAAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR TCA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCACCCTCATCTCACTATaGATAAGGGTTGCAGAATCC +
Preference number: 2 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLTLISL*IRVAES
Trigger: GGATTCTGCAACCCTTATTCATAGTGAGATGAGGGT...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR GCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAAAGGAAAGCAGAATCTaGCACGATCTGTTACAGCTC +
Preference number: 2 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQKESRI*HDLLQL
Trigger: GAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTT...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCGGAGTTAGCAGATTCTaGAGAAGGCATAGGCCATAT +
Preference number: 2 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLGVSRF*RRHRPY
Trigger: ATATGGCCTATGCCTTCTCCAGAATCTGCTAACTCC...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR TCA 90 bp GCATTGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTCCTCTTCTCATCCTCTCTCCCCAAGTAGACTaGAAGTTCTGTGAGTCAGGA +
Preference number: 2 (lower is better)
Translates to: ALNRPELPWCSLFPLLILSPQVD*KFCESG
Trigger: TCCTGACTCACAGAACTTTCAGTCTACTTGGGGAGA...GAGGATGAGAAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR GCA 90 bp GGAATAGAAAGTGCAGCACCTAGGACTAACCTCAGCTCATACCCCTTCCCAGTGGTGTTTTTGTGTGCTTaGAGATGCACCTGGGAGATG +
Preference number: 2 (lower is better)
Translates to: GIESAAPRTNLSSYPFPVVFLCA*RCTWEM
Trigger: CATCTCCCAGGTGCATCTGCAAGCACACAAAAACAC...CACTGGGAAGGGGTATGAGCTGAGGTTAGTCCTAGGTGCTGCACTTTCTATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR CCA 90 bp TTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGCTTGAGCTGGTGCTGCAGCTTTaGCCTCCCTCCCACACATCC +
Preference number: 2 (lower is better)
Translates to: FMHVSRSSCLTCHTDELELVLQL*PPSHTS
Trigger: GGATGTGTGGGAGGGAGGCCAAAGCTGCAGCACCAG...CTCAAGCTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR TCA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCACACTCACCAAGGGTTaGAAAAATGCTAAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLTLTKG*KNAKRA
Trigger: TGCTCTTTTAGCATTTTTTCAACCCTTGGTGAGTGT...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR GCA 90 bp TTAGAAGGAGTCAAGATCATCAAGCTCTTCCTCAGCAACCCTGGGGATGGTCATTGGCAGGAGACTCACTaGATCATGAGAGAAGAGAGG +
Preference number: 2 (lower is better)
Translates to: LEGVKIIKLFLSNPGDGHWQETH*IMREER
Trigger: CCTCTCTTCTCTCATGATGCAGTGAGTCTCCTGCCA...ATGACCATCCCCAGGGTTGCTGAGGAAGAGCTTGATGATCTTGACTCCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp CTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTTTAGTTACTTCCGATGTTCCTaGCAAGGTACCTGGACACCA +
Preference number: 2 (lower is better)
Translates to: LWRDPHLTMNKGCRIPFSYFRCS*QGTWTP
Trigger: TGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA...ACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTGTAATCTCAGCACTTTaGGAGGCCGAAGCAGGTGGA +
Preference number: 2 (lower is better)
Translates to: SVPHSKYSTATTLVLAWIVISAL*EAEAGG
Trigger: TCCACCTGCTTCGGCCTCCCAAAGTGCTGAGATTAC...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp CATAATATCTCTGTGTCCAACAGGATGTGGAACATTGCTCTAACACCTGGCCTACCACTAAGTTGCAGTTaGCTGGTGGGACTAGCCCTA +
Preference number: 2 (lower is better)
Translates to: HNISVSNRMWNIALTPGLPLSCS*LVGLAL
Trigger: TAGGGCTAGTCCCACCAGCCAACTGCAACTTAGTGG...TAGGCCAGGTGTTAGAGCAATGTTCCACATCCTGTTGGACACAGAGATATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 90 bp TTAACCCTCCAGACCTCCAAAACTGAATCCACTATTTGTGAGAGGTaGCAGGAAAAGAGATTGGGAGAAGGTCCTTGGGTCTGCTGGATT +
Preference number: 2 (lower is better)
Translates to: LTLQTSKTESTICER*QEKRLGEGPWVCWI
Trigger: AATCCAGCAGACCCAAGGACCTTCTCCCAATCTCTTTTCCTGCAACCTCTCACAAATAGTGGATTCAGTTTTGGAGGTCTGGAGGGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
3UTR-3UTR TCA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAAGACTTCTTAAGCACCTaGGAGTCTGCAGTCTTACCG +
Preference number: 2 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQDFLST*ESAVLP
Trigger: CGGTAAGACTGCAGACTCTCAGGTGCTTAAGAAGTC...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR TCA 90 bp AGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCTTGATAAAGATGCACAGAGGATaGGAGGGGAAAGACAAGGAA +
Preference number: 2 (lower is better)
Translates to: RKAESATICYSSDAVTLIKMHRG*EGKDKE
Trigger: TTCCTTGTCTTTCCCCTCTCATCCTCTGTGCATCTT...TATCAAGGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR TCA 90 bp AGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGTATATACTTGTCAAATaGAAATGTCCCAGAGCCTTC +
Preference number: 2 (lower is better)
Translates to: RTEQGRVGPSVSRPAQLVYILVK*KCPRAF
Trigger: GAAGGCTCTGGGACATTTTCATTTGACAAGTATATA...CACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR GCA 90 bp CCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTAACCTCAAGCACCTGAGAGTCTaGAGTCTTACCGGAAACATT +
Preference number: 2 (lower is better)
Translates to: PTHPDMSGIESAAPRTNLKHLRV*SLTGNI
Trigger: AATGTTTCCGGTAAGACTGCAGACTCTCAGGTGCTT...GAGGTTAGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR GCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCTCCCTAGGATGCATTTaGCCTTTGGTTGCATGTGTT +
Preference number: 2 (lower is better)
Translates to: PCLAITLSSLQISNAYIFSLGCI*PLVACV
Trigger: AACACATGCAACCAAAGGGCAAATGCATCCTAGGGA...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR GCA 90 bp TCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGACTAGCCCTAAGTCATaGCACGTTCAGAAAAGATGT +
Preference number: 2 (lower is better)
Translates to: SSHPLEDRTRQGRSISITTSPKS*HVQKRC
Trigger: ACATCTTTTCTGAACGTGGCATGACTTAGGGCTAGT...CGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCGCATCTGTGCTCACCTaGTTCCGATCTCCTATTTTG +
Preference number: 2 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSASVLT*FRSPIL
Trigger: CAAAATAGGAGATCGGAACCAGGTGAGCACAGATGC...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CCA 90 bp AGTGCACAAGCTCAAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATCATCTAAGGTGTGTATaGGGCATGAAGAGGGGCAAT +
Preference number: 2 (lower is better)
Translates to: SAQAQTLIPGSSLSLCHNHLRCV*GMKRGN
Trigger: ATTGCCCCTCTTCATGCCCCATACACACCTTAGATG...ATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTTGAGCTTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR GCA 90 bp TTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGCTTGAGTTGTGTGCTTGCAGATaGACCTGGGAGATGCAGATC +
Preference number: 2 (lower is better)
Translates to: FMHVSRSSCLTCHTDELELCACR*TWEMQI
Trigger: GATCTGCATCTCCCAGGTGCATCTGCAAGCACACAA...CTCAAGCTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR GCA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAAGTGTGTGTTTTTGTGTaGTTGCAGATGCACCTGGGA +
Preference number: 2 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQVCVFV*LQMHLG
Trigger: TCCCAGGTGCATCTGCAAGCACACAAAAACACACAC...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR GCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTCCAGCAGAAAATGCATaGTCCTGTCCCCATAAGACC +
Preference number: 2 (lower is better)
Translates to: SKILSHCSLGCICPLVACPAENA*SCPHKT
Trigger: GGTCTTATGGGGACAGGAGCATGCATTTTCTGCTGG...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR GCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCCATTGTTCCCTAGGATaGATTTGCCCTTTGGTTGCA +
Preference number: 2 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSHCSLG*ICPLVA
Trigger: TGCAACCAAAGGGCAAATGCATCCTAGGGAACAATG...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CCA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAAGATGCAGATCCATTTTaGGTGAATGGTGGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQDADPF*VNGGGC
Trigger: ACAGCCTCCACCATTCACCCAAAATGGATCTGCATC...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR CCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGTCTAAATCTGCATGCTaGGGTTTGAGGGAATCAGCA +
Preference number: 2 (lower is better)
Translates to: LSLCSNPHFREVILISRLSKSAC*GLRESA
Trigger: TGCTGATTCCCTCAAACCCCAGCATGCAGATTTAGA...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTGTGTCCAACAGGATGTaGAACATTGCTCTAACACCT +
Preference number: 2 (lower is better)
Translates to: SVPHSKYSTATTLVLAWIVSNRM*NIALTP
Trigger: AGGTGTTAGAGCAATGTTCCACATCCTGTTGGACAC...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR GCA 90 bp AGTGCACAAGCTCAAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATGGTATTAAAGCAGACTaGAAGATGACCCTCAGTCTT +
Preference number: 2 (lower is better)
Translates to: SAQAQTLIPGSSLSLCHNGIKAD*KMTLSL
Trigger: AAGACTGAGGGTCATCTTGCAGTCTGCTTTAATACC...ATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTTGAGCTTGTGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CCA 90 bp TGGATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCTTGGGAGAAGGTCCTTaGGTCTGCTGGATTCAGAGA +
Preference number: 2 (lower is better)
Translates to: WIHSNIFPLTLQTSKTESLGEGP*VCWIQR
Trigger: TCTCTGAATCCAGCAGACCCAAGGACCTTCTCCCAA...GGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
3UTR-3UTR CCA 90 bp TTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGCTTGAGTCCATTTTGGGTGAATaGTGGAGGCTGTGTAGTCAG +
Preference number: 2 (lower is better)
Translates to: FMHVSRSSCLTCHTDELESILGE*WRLCSQ
Trigger: CTGACTACACAGCCTCCACCATTCACCCAAAATGGA...CTCAAGCTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR CCA 90 bp TTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGCTTGAGGCTTGCAGATGCACCTaGGAGATGCAGATCCATTTT +
Preference number: 2 (lower is better)
Translates to: FMHVSRSSCLTCHTDELEACRCT*EMQIHF
Trigger: AAAATGGATCTGCATCTCCCAGGTGCATCTGCAAGC...CTCAAGCTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR TCA 90 bp CATAATATCTCTGTGTCCAACAGGATGTGGAACATTGCTCTAACACCTGGCCTAGATCTGTTACAGCTCTaGTGCAGTGACCTTGATATT +
Preference number: 2 (lower is better)
Translates to: HNISVSNRMWNIALTPGLDLLQL*CSDLDI
Trigger: AATATCAAGGTCACTGCATCAGAGCTGTAACAGATC...TAGGCCAGGTGTTAGAGCAATGTTCCACATCCTGTTGGACACAGAGATATTATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR GCA 90 bp TGGATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCTTCCCAATACAATGCTaGCCTTTCCCAGATCAAGCC +
Preference number: 2 (lower is better)
Translates to: WIHSNIFPLTLQTSKTESFPIQC*PFPDQA
Trigger: GGCTTGATCTGGGAAAGGGCAGCATTGTATTGGGAA...GGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
3UTR-3UTR CCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGATGCATTTGCCCTTTaGTTGCATGTGTTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: RESASMQLRYSDHIFKSTDAFAL*LHVLLL
Trigger: CAGCAACAACACATGCAACCAAAGGGCAAATGCATC...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCAACTACCGAGGAAATTaGGAAACAGCTCTCAAAACA +
Preference number: 2 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSNYRGN*ETALKT
Trigger: TGTTTTGAGAGCTGTTTCCCAATTTCCTCGGTAGTT...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CAA 90 bp TTCTCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTaGGCCTGGATTATTTCTCACCTGGATTTTTATAACAGCCTCCTA +
Preference number: 2 (lower is better)
Translates to: FSVPHSKYSTATTLV*AWIISHLDFYNSLL
Trigger: TAGGAGGCTGTTATAAAAATCCAGGTGAGAAATAATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR GCA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTCTTTTGCATCTTCCTTaGCTGGCAATCACCCTTTCC +
Preference number: 2 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCLLHLP*LAITLS
Trigger: GGAAAGGGTGATTGCCAGGCAAGGAAGATGCAAAAG...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR TCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGGAAGCTAGAGAAGAGTaGTTAATTTCATTCCCCAGC +
Preference number: 2 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGEAREE*LISFPS
Trigger: GCTGGGGAATGAAATTAATCACTCTTCTCTAGCTTC...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CCA 90 bp CAATCAACATATGGCTCTTTGTCATCATTTCTGAAAACTAGCATGCAAAGGAGATTAATCCCTGTCACCTaGGATCTGGAGACCTTAACC +
Preference number: 2 (lower is better)
Translates to: QSTYGSLSSFLKTSMQRRLIPVT*DLETLT
Trigger: GGTTAAGGTCTCCAGATCCCAGGTGACAGGGATTAA...TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CAA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTaGATTTCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGC +
Preference number: 2 (lower is better)
Translates to: QACSLDTVTIYLSPP*ISKILSHCSLGCIC
Trigger: GCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR TCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTCTGAGCTTTTTGAGCTaGAGGCTTACAATTGATTTT +
Preference number: 2 (lower is better)
Translates to: SKILSHCSLGCICPLVACLSFLS*RLTIDF
Trigger: AAAATCAATTGTAAGCCTTCAGCTCAAAAAGCTCAG...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR GCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGGGTTGCATGTGTTGTTaGTGTTGTTTTGGATCAGAA +
Preference number: 2 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGGCMCC*CCFGSE
Trigger: TTCTGATCCAAAACAACAGCAACAACACATGCAACC...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR GCA 90 bp CAATCAACATATGGCTCTTTGTCATCATTTCTGAAAACTAGCATGCAAAGGAGACATCCTTCTGTCTTTTaGATCTTCCTTGCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: QSTYGSLSSFLKTSMQRRHPSVF*IFLAWQ
Trigger: TTGCCAGGCAAGGAAGATGCAAAAGACAGAAGGATG...TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR GCA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTTTTTCTAAATCTGCATaGTGGGGTTTGAGGGAATCA +
Preference number: 2 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCFSKSA*WGLRES
Trigger: TGATTCCCTCAAACCCCAGCATGCAGATTTAGAAAA...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR GCA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAACCTTTCACTAGCCTATaGATTAATCCACAAATCCTT +
Preference number: 2 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKPFTSL*INPQIL
Trigger: AAGGATTTGTGGATTAATGCATAGGCTAGTGAAAGG...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CCA 72 bp CTCCTTCTAGGGCCATTGCCCTACTTCCGATGTTCCTaGCAAGGTACCTGGACACCATACCCCCAACCCTCC +
Preference number: 3 (lower is better)
Translates to: LLLGPLPYFRCS*QGTWTPYPQPS
Trigger: GGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTAGGGCAATGGCCCTAGAAGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR TCA 72 bp GATGTGGAACATTGCTCTAACACCTGGCCTACCCCCTaGCAGCCCCTCCTTCTAGGGCCATTGCCCTACTTC +
Preference number: 3 (lower is better)
Translates to: DVEHCSNTWPTP*QPLLLGPLPYF
Trigger: GAAGTAGGGCAATGGCCCTAGAAGGAGGGGCTGTCAGGGGGTAGGCCAGGTGTTAGAGCAATGTTCCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 72 bp CAGGAAAAGAGATTGGGAGAAGGTCCTTGGGTCTGCTaGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: QEKRLGEGPWVC*IQRRAGLVPPW
Trigger: CCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCCAATCTCTTTTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
3UTR TCA 72 bp GGGCAGGCCTCCTCTGGAGGGACCCTCATCTCACTATaGATAAGGGTTGCAGAATCCCCTTTAGTGCACAAG +
Preference number: 3 (lower is better)
Translates to: GQASSGGTLISL*IRVAESPLVHK
Trigger: CTTGTGCACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAGGAGGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR GCA 72 bp TTGCAGGAAAAGAGATTGGGAGAAGGTCCTTGGGTCTaGTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCC +
Preference number: 3 (lower is better)
Translates to: LQEKRLGEGPWV*WIQRRAGLVPP
Trigger: GGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCCAATCTCTTTTCCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
3UTR CCA 72 bp CCATTGCCCTACTTCCGATGTTCCTGGCAAGGTACCTaGACACCATACCCCCAACCCTCCCAAACACACATA +
Preference number: 3 (lower is better)
Translates to: PLPYFRCSWQGT*TPYPQPSQTHI
Trigger: TATGTGTGTTTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTAGGGCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CAA 90 bp AGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGTGGCCTGGGAAAGATTaGGAGCATGGCAATTGGGGT +
Preference number: 3 (lower is better)
Translates to: RTEQGRVGPSVSRPAQLVWPGKD*EHGNWG
Trigger: ACCCCAATTGCCATGCTCCAAATCTTTCCCAGGCCA...CACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 72 bp ACTCACTGCATCATGAGAGAAGAGAGGGGAGAGAGATaGAAGCAGAGTAAGATATGGGCAGGCCATGGGTCC +
Preference number: 3 (lower is better)
Translates to: THCIMREERGER*KQSKIWAGHGS
Trigger: GGACCCATGGCCTGCCCATATCTTACTCTGCTTCCATCTCTCTCCCCTCTCTTCTCTCATGATGCAGTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 72 bp AGGAGTCAAGATCATCAAGCTCTTCCTCAGCAACCCTaGGGATGGTCATCCAGCCTGTGGACTTGCATAGCT +
Preference number: 3 (lower is better)
Translates to: RSQDHQALPQQP*GWSSSLWTCIA
Trigger: AGCTATGCAAGTCCACAGGCTGGATGACCATCCCCAGGGTTGCTGAGGAAGAGCTTGATGATCTTGACTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CAA 90 bp CTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTTTAGTCAGGTGGCCAGGACTTaGGAACCCACAGACCCTCTT +
Preference number: 3 (lower is better)
Translates to: LWRDPHLTMNKGCRIPFSQVART*EPTDPL
Trigger: AAGAGGGTCTGTGGGTTCCAAAGTCCTGGCCACCTG...ACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CAA 90 bp CTCCCTCCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTAGATGCAGATCCATTTaGGGTGAATGGTGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: LPPTHPDMSGIESAAPRTRCRSI*GEWWRL
Trigger: CAGCCTCCACCATTCACCCAAAATGGATCTGCATCT...AGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR CAA 90 bp GGAATAGAAAGTGCAGCACCTAGGACTAACCTCAGCTCATACCCCTTCCCAGTGTGTGTTTTTGTGTGCTaGCAGATGCACCTGGGAGAT +
Preference number: 3 (lower is better)
Translates to: GIESAAPRTNLSSYPFPVCVFVC*QMHLGD
Trigger: ATCTCCCAGGTGCATCTGCAAGCACACAAAAACACA...CACTGGGAAGGGGTATGAGCTGAGGTTAGTCCTAGGTGCTGCACTTTCTATTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR GCA 72 bp AAGTTGCAGTTGGCTGGTGGGACTAGCCCTAAGTCATaGCACGTTCAGAAAAGATGTTTTCCTGCACAGAGG +
Preference number: 3 (lower is better)
Translates to: KLQLAGGTSPKS*HVQKRCFPAQR
Trigger: CCTCTGTGCAGGAAAACATCTTTTCTGAACGTGGCATGACTTAGGGCTAGTCCCACCAGCCAACTGCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 72 bp TGGGGTAGGAGTATCATACTAAGGGCTGAGGCAAACTaGACAATCCAAAGACGCCACCAGAAGAAGAAGCAC +
Preference number: 3 (lower is better)
Translates to: WGRSIILRAEAN*TIQRRHQKKKH
Trigger: GTGCTTCTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGATACTCCTACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 72 bp GAAGGCATAGGCCATATGCATCATCTAAGGTGTGTATaGGGCATGAAGAGGGGCAATGTGGCACATAACAGG +
Preference number: 3 (lower is better)
Translates to: EGIGHMHHLRCV*GMKRGNVAHNR
Trigger: CCTGTTATGTGCCACATTGCCCCTCTTCATGCCCCATACACACCTTAGATGATGCATATGGCCTATGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR TCA 72 bp CAAACAGAACCCAGGTTAAATCACCCTTGCATGCATTaGATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTC +
Preference number: 3 (lower is better)
Translates to: QTEPRLNHPCMH*IGLSFPGAVCF
Trigger: GAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGCATGCAAGGGTGATTTAACCTGGGTTCTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CAA 90 bp CCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTAACCTCCTAATACGTTCCTGTTaGTCCAGAGCCTCAGTGACT +
Preference number: 3 (lower is better)
Translates to: PTHPDMSGIESAAPRTNLLIRSC*SRASVT
Trigger: AGTCACTGAGGCTCTGGACAAACAGGAACGTATTAG...GAGGTTAGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
3UTR-3UTR CAA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCGCATTTGCCCTTTGGTaGCATGTGTTGTTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: PCLAITLSSLQISNAYIFAFALW*HVLLLL
Trigger: CAACAGCAACAACACATGCAACCAAAGGGCAAATGC...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR GCA 72 bp CTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTaGAGAATCCCCTTTAGTGCACAAGCTCAAACTCTT +
Preference number: 3 (lower is better)
Translates to: LWRDPHLTMNKG*RIPFSAQAQTL
Trigger: AAGAGTTTGAGCTTGTGCACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 72 bp AGTTCCAATCATAATATCTCTGTGTCCAACAGGATGTaGAACATTGCTCTAACACCTGGCCTACCCCCTGAC +
Preference number: 3 (lower is better)
Translates to: SSNHNISVSNRM*NIALTPGLPPD
Trigger: GTCAGGGGGTAGGCCAGGTGTTAGAGCAATGTTCCACATCCTGTTGGACACAGAGATATTATGATTGGAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 72 bp AATCCACTATTTGTGAGAGGTTGCAGGAAAAGAGATTaGGAGAAGGTCCTTGGGTCTGCTGGATTCAGAGAA +
Preference number: 3 (lower is better)
Translates to: NPLFVRGCRKRD*EKVLGSAGFRE
Trigger: TTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCCAATCTCTTTTCCTGCAACCTCTCACAAATAGTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
3UTR CCA 72 bp CTACATCTTCAGGGGCCAGGCTTAATCCCTGTCACCTaGGATCTGGAGACCTTAACCATAATAAACCTTTTA +
Preference number: 3 (lower is better)
Translates to: LHLQGPGLIPVT*DLETLTIINLL
Trigger: TAAAAGGTTTATTATGGTTAAGGTCTCCAGATCCCAGGTGACAGGGATTAAGCCTGGCCCCTGAAGATGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CAA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCTTCCGATCTCCTATTTaGTTCCTGAGCTTTTTGAGC +
Preference number: 3 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSFRSPI*FLSFLS
Trigger: GCTCAAAAAGCTCAGGAACAAAATAGGAGATCGGAA...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CAA 90 bp GTGCAGTTTGTTTCCTCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGATGCTGTGTTTACTTTaGATAAATGAGTGTTGGCTG +
Preference number: 3 (lower is better)
Translates to: VQFVSSSHPLEDRTRQGRMLCLL*INECWL
Trigger: CAGCCAACACTCATTTATCAAAAGTAAACACAGCAT...CCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGAGGAAACAAACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CAA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCCATGTGTTGTTGCTGTaGTTTTGGATCAGAAAATAC +
Preference number: 3 (lower is better)
Translates to: PCLAITLSSLQISNAYIFHVLLL*FWIRKY
Trigger: GTATTTTCTGATCCAAAACAACAGCAACAACACATG...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CAA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGTCTTTTGCATCTTCCTaGCCTGGCAATCACCCTTTC +
Preference number: 3 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGSFASS*PGNHPF
Trigger: GAAAGGGTGATTGCCAGGCAAGGAAGATGCAAAAGA...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CCA 72 bp GAAGCATATGCATGTGTTATAGGAGTTAGCAGATTCTaGAGAAGGCATAGGCCATATGCATCATCTAAGGTG +
Preference number: 3 (lower is better)
Translates to: EAYACVIGVSRF*RRHRPYASSKV
Trigger: CACCTTAGATGATGCATATGGCCTATGCCTTCTCCAGAATCTGCTAACTCCTATAACACATGCATATGCTTC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CCA 72 bp CAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTaGTCTTGGCCTGGATTATTTCTCACCTGGATTTTT +
Preference number: 3 (lower is better)
Translates to: QFHILSILQPPL*SWPGLFLTWIF
Trigger: AAAAATCCAGGTGAGAAATAATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CAA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTGAATCTGTCCTTCCATaGTCTACATTCAAGATCAAA +
Preference number: 3 (lower is better)
Translates to: SVPHSKYSTATTLVLAWIESVLP*STFKIK
Trigger: TTTGATCTTGAATGTAGACAATGGAAGGACAGATTC...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR GCA 72 bp TTCTTGTCTTTAGTATGTTCTCTGTTACATTCCCTGTaGCTAGAACTTTACCTGACCTATGACAGGCACTCA +
Preference number: 3 (lower is better)
Translates to: FLSLVCSLLHSL*LELYLTYDRHS
Trigger: TGAGTGCCTGTCATAGGTCAGGTAAAGTTCTAGGCACAGGGAATGTAACAGAGAACATACTAAAGACAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CAA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAAGGATGCATTTGCCCTTaGGTTGCATGTGTTGTTGCT +
Preference number: 3 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKGCICP*VACVVA
Trigger: AGCAACAACACATGCAACCAAAGGGCAAATGCATCC...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CAA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAATTCCCTAGGATGCATTaGCCCTTTGGTTGCATGTGT +
Preference number: 3 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKFPRMH*PFGCMC
Trigger: ACACATGCAACCAAAGGGCAAATGCATCCTAGGGAA...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CAA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTTGGTTGCATGTGTTGTaGCTGTTGTTTTGGATCAGA +
Preference number: 3 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCWLHVL*LLFWIR
Trigger: TCTGATCCAAAACAACAGCAACAACACATGCAACCA...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR-3UTR CAA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTAAACTACCGAGGAAATaGGGAAACAGCTCTCAAAAC +
Preference number: 3 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCKLPRK*GNSSQN
Trigger: GTTTTGAGAGCTGTTTCCCAATTTCCTCGGTAGTTT...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR TCA 72 bp GCATTAATCCACAAATCCTTGGAAGCTAGAGAAGAGTaGTTAATTTCATTCCCCAGCAGAAAATGCATGCTC +
Preference number: 3 (lower is better)
Translates to: ALIHKSLEAREE*LISFPSRKCML
Trigger: GAGCATGCATTTTCTGCTGGGGAATGAAATTAATCACTCTTCTCTAGCTTCCAAGGATTTGTGGATTAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CCA 72 bp CACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTaGCCTGGATTATTTCTCACCTGGATTTTTATAACA +
Preference number: 3 (lower is better)
Translates to: HILSILQPPLWS*PGLFLTWIFIT
Trigger: TGTTATAAAAATCCAGGTGAGAAATAATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR-3UTR CAA 90 bp ATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCACTCTATGTATTCCTAATTaGCAGCTTCTAGTGGACTTT +
Preference number: 3 (lower is better)
Translates to: IHSNIFPLTLQTSKTESTLCIPN*QLLVDF
Trigger: AAAGTCCACTAGAAGCTGCAAATTAGGAATACATAG...AGTGGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp TCTGGAGCCAGCTTCCACAGTAGCAACAGGACTGGAAGCCCAGCCTGGTGCTGCGCAGTAGGGAGCGGGTaGTGGGATCAGTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SGASFHSSNRTGSPAWCCAVGSG*WDQWAD
Trigger: GTCAGCCCACTGATCCCACCACCCGCTCCCTACTGC...GCAGCACCAGGCTGGGCTTCCAGTCCTGTTGCTACTGTGGAAGCTGGCTCCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp CCCCTGACAGCCCCTCCTTCTAGGGCCATTGCCCTACTTCCGATGTTCCTGGCAGGCCATGGGTCCGGCTaGCCTGGGAAAGATTTGGAG +
Preference number: 4 (lower is better)
Translates to: PLTAPPSRAIALLPMFLAGHGSG*PGKDLE
Trigger: CTCCAAATCTTTCCCAGGCCAGCCGGACCCATGGCC...TGCCAGGAACATCGGAAGTAGGGCAATGGCCCTAGAAGGAGGGGCTGTCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp CCCCTGACAGCCCCTCCTTCTAGGGCCATTGCCCTACTTCCGATGTTCCTGGCAGGCAGGGGAATCGCTTaGACCCAGGAGGCAGAAGTT +
Preference number: 4 (lower is better)
Translates to: PLTAPPSRAIALLPMFLAGRGIA*TQEAEV
Trigger: AACTTCTGCCTCCTGGGTTCAAGCGATTCCCCTGCC...TGCCAGGAACATCGGAAGTAGGGCAATGGCCCTAGAAGGAGGGGCTGTCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp TCTGGAGCCAGCTTCCACAGTAGCAACAGGACTGGAAGCCCAGCCTGGTGCTGCCGTTGTTGCACACTCTaGCCCAGCTGCTCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: SGASFHSSNRTGSPAWCCRCCTL*PSCSRK
Trigger: CTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACG...GCAGCACCAGGCTGGGCTTCCAGTCCTGTTGCTACTGTGGAAGCTGGCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR TCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAATACTCTCGGCTGGATaGGGGCTGGCCCAAGGCTGG +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQILSAG*GLAQGW
Trigger: CCAGCCTTGGGCCAGCCCTCATCCAGCCGAGAGTAT...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp GGGAGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCCATGCAGGGTAGGATaGACCCATGGAGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: GRRSLGLLDSEKSRPSASPCRVG*THGEGS
Trigger: GGATCCCTCTCCATGGGTCCATCCTACCCTGCATGG...GGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp ATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTAGTCAGCCCAGCCTGGTGCTaGAGCTTTGGCCTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: MHLGDADPFWVNGGGCVVSPAWC*SFGLPP
Trigger: GGGAGGGAGGCCAAAGCTGCAGCACCAGGCTGGGCT...GACTACACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp CCCCTGACAGCCCCTCCTTCTAGGGCCATTGCCCTACTTCCGATGTTCCTGGCAGGTGTTTCCCCTGGGTaGACTCGTCCTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: PLTAPPSRAIALLPMFLAGVSPG*TRPVMN
Trigger: ATTCATCACAGGACGAGTCCACCCAGGGGAAACACC...TGCCAGGAACATCGGAAGTAGGGCAATGGCCCTAGAAGGAGGGGCTGTCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp GGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTTGGTAGGATGGACCCATaGAGAGGGATCCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GPWVCWIQRRAGLVPPWFGRMDP*RGIQPV
Trigger: CACTGGCTGGATCCCTCTCCATGGGTCCATCCTACC...AAACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp CCCCTGACAGCCCCTCCTTCTAGGGCCATTGCCCTACTTCCGATGTTCCTGGCATCTGGCAGAGGAGCTTaGGAAAAATGGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLTAPPSRAIALLPMFLASGRGA*EKWPAS
Trigger: AGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGA...TGCCAGGAACATCGGAAGTAGGGCAATGGCCCTAGAAGGAGGGGCTGTCAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp AGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGGCGACGGCCAGTTCCTaGTTTCACAGCGTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: RTEQGRVGPSVSRPAQLVATASS*FHSVPV
Trigger: AACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGC...CACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp GGGAGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCATTTCCCATATCATTaGCTGCCTCAGGCGCCGACT +
Preference number: 4 (lower is better)
Translates to: GRRSLGLLDSEKSRPSASHFPYH*LPQAPT
Trigger: AGTCGGCGCCTGAGGCAGGCAATGATATGGGAAATG...GGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAGGTAGGATGGACCCATaGAGAGGGATCCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQGRMDP*RGIQPV
Trigger: CACTGGCTGGATCCCTCTCCATGGGTCCATCCTACC...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCCCATGCAGGGTAGGATaGACCCATGGAGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLPCRVG*THGEGS
Trigger: GGATCCCTCTCCATGGGTCCATCCTACCCTGCATGG...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CCAATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGGCAGTAGGGAGCGGGTaGTGGGATCAGTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PIQCCPFPDQAIDQQLWRAVGSG*WDQWAD
Trigger: GTCAGCCCACTGATCCCACCACCCGCTCCCTACTGC...CCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp TTGCAGATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGCCTCAGGCGCCGACTaGCTCCCCTCCGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LQMHLGDADPFWVNGGGCASGAD*LPSAIF
Trigger: AAAAATGGCGGAGGGGAGCCAGTCGGCGCCTGAGGC...ACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCATCTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp TCTGGAGCCAGCTTCCACAGTAGCAACAGGACTGGAAGCCCAGCCTGGTGCTGCATCTTCCAGCAGGGCTaGTTATCGTCAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: SGASFHSSNRTGSPAWCCIFQQG*LSSGGQ
Trigger: TTGACCTCCTGACGATAACCAGCCCTGCTGGAAGAT...GCAGCACCAGGCTGGGCTTCCAGTCCTGTTGCTACTGTGGAAGCTGGCTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp ATGGCAGGAGACTCACTGCATCATGAGAGAAGAGAGGGGAGAGAGATGGAAGCAGATATGGGCAGGCCATaGGTCCGGCTGGCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: MAGDSLHHERREGREMEADMGRP*VRLAWE
Trigger: TTCCCAGGCCAGCCGGACCCATGGCCTGCCCATATC...TGCTTCCATCTCTCTCCCCTCTCTTCTCTCATGATGCAGTGAGTCTCCTGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAACCTCCATCCTCACCTaGGAGTCTCAGCCCTTACCT +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQTSILT*ESQPLP
Trigger: AGGTAAGGGCTGAGACTCTCAGGTGAGGATGGAGGT...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp TCTGGAGCCAGCTTCCACAGTAGCAACAGGACTGGAAGCCCAGCCTGGTGCTGCGATGCACCTGGGAGATaGAGATCCATTTTGGGTGAA +
Preference number: 4 (lower is better)
Translates to: SGASFHSSNRTGSPAWCCDAPGR*RSILGE
Trigger: TTCACCCAAAATGGATCTGCATCTCCCAGGTGCATC...GCAGCACCAGGCTGGGCTTCCAGTCCTGTTGCTACTGTGGAAGCTGGCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp AGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTGGTGTTTCCCCTGGGTaGACTCGTCCTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: RSLGLLDSEKSRPSASLVGVSPG*TRPVMN
Trigger: ATTCATCACAGGACGAGTCCACCCAGGGGAAACACC...AACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp ATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTAGTCGGGTGGTGGGATCAGTaGGCTGACAGGAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: MHLGDADPFWVNGGGCVVGWWDQ*ADRSYL
Trigger: GAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCC...GACTACACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp TTGCAGATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGCTGACCATACAGGCTaGCTCTTTGCTGCCCCCACC +
Preference number: 4 (lower is better)
Translates to: LQMHLGDADPFWVNGGGCADHTG*LFAAPT
Trigger: GGTGGGGGCAGCAAAGAGCCAGCCTGTATGGTCAGC...ACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCATCTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGGCACGACGGTTGCCTaGGCAACGGGCGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: RESASMQLRYSDHIFKSTGTTVA*ATGGRR
Trigger: GCGCCTGCCGCCCGTTGCCCAGGCAACCGTCGTGCC...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAAGGTGGCCAGGACTTTaGAACCCACAGACCCTCTTC +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQRWPGL*NPQTLF
Trigger: GAAGAGGGTCTGTGGGTTCCAAAGTCCTGGCCACCT...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 72 bp TGGGCAGGCCATGGGTCCGGCTGGCCTGGGAAAGATTaGGAGCATGGCAATTGGGGTAGGAGTATCATACTA +
Preference number: 4 (lower is better)
Translates to: WAGHGSGWPGKD*EHGNWGRSIIL
Trigger: TAGTATGATACTCCTACCCCAATTGCCATGCTCCAAATCTTTCCCAGGCCAGCCGGACCCATGGCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTACCTGGCCTACCCCCTaGCAGCCCCTCCTTCTAGGG +
Preference number: 4 (lower is better)
Translates to: SVPHSKYSTATTLVLAWITWPTP*QPLLLG
Trigger: CCCTAGAAGGAGGGGCTGTCAGGGGGTAGGCCAGGT...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAATGCATTGAATCGGCCTaGGCTTCCCTGGTGCAGTTT +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQCIESA*ASLVQF
Trigger: AAACTGCACCAGGGAAGCTCAGGCCGATTCAATGCA...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCTGCTGTTGGGGTAGTTaGTGGCTGGGCCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFCCWGS*WLGPAG
Trigger: TCCTGCGGGGCCCAGCCAGCAACTACCCCAACAGCA...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CCAATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGTCCCATATCATTGCCTaGCTCAGGCGCCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: PIQCCPFPDQAIDQQLWRSHIIA*LRRRLA
Trigger: AGCCAGTCGGCGCCTGAGGCAGGCAATGATATGGGA...CCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp CTACTCACCTTAACCCCTTCCAATCACGAGCTCCCATTCCCTGTCGCCACTCCCTGGCAGGAGACTCACTaGATCATGAGAGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LLTLTPSNHELPFPVATPWQETH*IMREER
Trigger: CCTCTCTTCTCTCATGATGCAGTGAGTCTCCTGCCA...GGGAGTGGCGACAGGGAATGGGAGCTCGTGATTGGAAGGGGTTAAGGTGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAGACCTGCTCAGCTTGTaGATAGCCTCTCTACTCACC +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQDLLSL*IASLLT
Trigger: GGTGAGTAGAGAGGCTATGCACAAGCTGAGCAGGTC...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAGGAGCTTGGGAAAAATaGCCTGCCTCTGGAACCGTT +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQGAWEK*PASGTV
Trigger: AACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCC...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTTTAGCTATGTATGGGTGGTGGGATCAGTaGGCTGACAGGAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: LLDSEKSRPSASLVLAMYGWWDQ*ADRSYL
Trigger: GAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCC...ATACATAGCTAAAACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCGCAGTAGGGAGCGGGTaGTGGGATCAGTGGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFAVGSG*WDQWAD
Trigger: GTCAGCCCACTGATCCCACCACCCGCTCCCTACTGC...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp ATGGCAGGAGACTCACTGCATCATGAGAGAAGAGAGGGGAGAGAGATGGAAGCACGTTGTTGCACACTCTaGCCCAGCTGCTCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: MAGDSLHHERREGREMEARCCTL*PSCSRK
Trigger: CTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACG...TGCTTCCATCTCTCTCCCCTCTCTTCTCTCATGATGCAGTGAGTCTCCTGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp AGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGGAGATTGTCAGGGCTaGTTATCGTCAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: RRSLGLLDSEKSRPSASLGDCQG*LSSGGQ
Trigger: TTGACCTCCTGACGATAACCAGCCCTGACAATCTCC...CAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp TCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGGGGCTGGCCCAAGGCTaGGTGGGGACTAAGGATACA +
Preference number: 4 (lower is better)
Translates to: SSHPLEDRTRQGRSISITGLAQG*VGTKDT
Trigger: TGTATCCTTAGTCCCCACCCAGCCTTGGGCCAGCCC...CGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CTGAGGCAAACTGGACAATCCAAAGACGCCACCAGAAGAAGAAGCACCTCCATCTTGGATACTCTCGGCTaGATGAGGGCTGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LRQTGQSKDATRRRSTSILDTLG*MRAGPR
Trigger: CCTTGGGCCAGCCCTCATCCAGCCGAGAGTATCCAA...GATGGAGGTGCTTCTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CTACTCACCTTAACCCCTTCCAATCACGAGCTCCCATTCCCTGTCGCCACTCCCGGCCTGGGAAAGATTTaGAGCATGGCAATTGGGGTA +
Preference number: 4 (lower is better)
Translates to: LLTLTPSNHELPFPVATPGLGKI*SMAIGV
Trigger: TACCCCAATTGCCATGCTCCAAATCTTTCCCAGGCC...GGGAGTGGCGACAGGGAATGGGAGCTCGTGATTGGAAGGGGTTAAGGTGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp GCATTGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTCCTCTTCTCATCCTCTGGGTCCGGCTGGCCTaGGAAAGATTTGGAGCATGG +
Preference number: 4 (lower is better)
Translates to: ALNRPELPWCSLFPLLILWVRLA*ERFGAW
Trigger: CCATGCTCCAAATCTTTCCCAGGCCAGCCGGACCCA...GAGGATGAGAAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 72 bp TCAGCAACCCTGGGGATGGTCATCCAGCCTGTGGACTaGCATAGCTTAGATGGCAGGAGACTCACTGCATCA +
Preference number: 4 (lower is better)
Translates to: SATLGMVIQPVD*HSLDGRRLTAS
Trigger: TGATGCAGTGAGTCTCCTGCCATCTAAGCTATGCAAGTCCACAGGCTGGATGACCATCCCCAGGGTTGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 72 bp ACCCTCTTCCTCAGAGCAGAGCCTACTCCCTTGGCCTaGCTGAGTCAGGTGGGTATTAAAGCAGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: TLFLRAEPTPLA*LSQVGIKADCK
Trigger: CTTGCAGTCTGCTTTAATACCCACCTGACTCAGCAAGGCCAAGGGAGTAGGCTCTGCTCTGAGGAAGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp GCATTGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTCCTCTTCTCATCCTCTGGAAACCTTGGGCCTaGACCAAGGGTGGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ALNRPELPWCSLFPLLILWKPWA*TKGGLS
Trigger: AGAAAGCCCACCCTTGGTTCAGGCCCAAGGTTTCCA...GAGGATGAGAAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp GGCCTCCTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTTGGGAAAAATGGCCTaGCTCTGGAACCGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: GLLWRDPHLTMNKGCRIPLGKMA*LWNRSS
Trigger: TGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAA...GGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAGGAGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp AGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGTTCCCAATACAATGCTaGCCTTTCCCAGATCAAGCC +
Preference number: 4 (lower is better)
Translates to: RRSLGLLDSEKSRPSASLFPIQC*PFPDQA
Trigger: GGCTTGATCTGGGAAAGGGCAGCATTGTATTGGGAA...CAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGACGCGGCACGACGGTTaGCTGGGCAACGGGCGGCAG +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGTRHDG*LGNGRQ
Trigger: CTGCCGCCCGTTGCCCAGGCAACCGTCGTGCCGCGT...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp AGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGTGCAGGAAAAGAGATTaGGAGAAGGTCCTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RRSLGLLDSEKSRPSASLCRKRD*EKVLGS
Trigger: AGACCCAAGGACCTTCTCCCAATCTCTTTTCCTGCA...CAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp CCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTAACCTCCTGGTGCTGCAGCTTTaGCCTCCCTCCCACACATCC +
Preference number: 4 (lower is better)
Translates to: PTHPDMSGIESAAPRTNLLVLQL*PPSHTS
Trigger: GGATGTGTGGGAGGGAGGCCAAAGCTGCAGCACCAG...GAGGTTAGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR TCA 90 bp AGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTTGTACATCTGGACGATaGGTTGTTTCACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: RSLGLLDSEKSRPSASLVCTSGR*VVSLHA
Trigger: TGCATGGAGTGAAACAACTCATCGTCCAGATGTACA...AACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR TCA 90 bp CTACTCACCTTAACCCCTTCCAATCACGAGCTCCCATTCCCTGTCGCCACTCCCTATCATACTAAGGGCTaGGGCAAACTGGACAATCCA +
Preference number: 4 (lower is better)
Translates to: LLTLTPSNHELPFPVATPYHTKG*GKLDNP
Trigger: TGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGATA...GGGAGTGGCGACAGGGAATGGGAGCTCGTGATTGGAAGGGGTTAAGGTGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp CTACTCACCTTAACCCCTTCCAATCACGAGCTCCCATTCCCTGTCGCCACTCCCACCCTCATCTCACTATaGATAAGGGTTGCAGAATCC +
Preference number: 4 (lower is better)
Translates to: LLTLTPSNHELPFPVATPTLISL*IRVAES
Trigger: GGATTCTGCAACCCTTATTCATAGTGAGATGAGGGT...GGGAGTGGCGACAGGGAATGGGAGCTCGTGATTGGAAGGGGTTAAGGTGAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp GGATCAAGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCCTGGGAAATCTTCCCTaGCTCCTAGGACTGCGTGTG +
Preference number: 4 (lower is better)
Translates to: GSRKAESATICYSSDAVTLGNLP*LLGLRV
Trigger: CACACGCAGTCCTAGGAGTCAGGGAAGATTTCCCAG...GGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGCACCCTTGCATGCATTaGATCGGCCTGAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SSHPLEDRTRQGRSISITHPCMH*IGLSFP
Trigger: AGGGAAGCTCAGGCCGATTCAATGCATGCAAGGGTG...CGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGGCGACGGCCAGTTCCTaGTTTCACAGCGTCCCGGTT +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLATASS*FHSVPV
Trigger: AACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGC...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CCCCTGACAGCCCCTCCTTCTAGGGCCATTGCCCTACTTCCGATGTTCCTGGCAACTATGAATAAGGGTTaGAGAATCCCCTTTAGTGCA +
Preference number: 4 (lower is better)
Translates to: PLTAPPSRAIALLPMFLATMNKG*RIPFSA
Trigger: TGCACTAAAGGGGATTCTGCAACCCTTATTCATAGT...TGCCAGGAACATCGGAAGTAGGGCAATGGCCCTAGAAGGAGGGGCTGTCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp CTGGGGATGGTCATCCAGCCTGTGGACTTGCATAGCTTAGATGGCAGGAGACTCACCACTTACAGCTTCTaGCCATACCTTCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: LGMVIQPVDLHSLDGRRLTTYSF*PYLLYS
Trigger: GGAGTACAGAAGGTATGGGCAGAAGCTGTAAGTGGT...GAGTCTCCTGCCATCTAAGCTATGCAAGTCCACAGGCTGGATGACCATCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp AGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTGGGTCGTTGTACATCTaGACGATGAGTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: RSLGLLDSEKSRPSASLVGSLYI*TMSCFT
Trigger: AGTGAAACAACTCATCGTCCAGATGTACAACGACCC...AACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCAGCCATTCATCATGGTaGAGTGGGCATGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLSHSSW*SGHGCQ
Trigger: TTGACATCCATGCCCACTCCACCATGATGAATGGCT...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAAGTAGGGAGCGGGTGGTaGGATCAGTGGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQVGSGW*DQWADR
Trigger: CCTGTCAGCCCACTGATCCCACCACCCGCTCCCTAC...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp CTCCAGACCTCCAAAACTGAATCCACTATTTGTGAGAGGTTGCAGGAAAAGAGAGCCTCAGGCGCCGACTaGCTCCCCTCCGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: LQTSKTESTICERLQEKRASGAD*LPSAIF
Trigger: AAAAATGGCGGAGGGGAGCCAGTCGGCGCCTGAGGC...TCTCTTTTCCTGCAACCTCTCACAAATAGTGGATTCAGTTTTGGAGGTCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp AGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTCAGCCTTTGCCATTTTaGTCTGCTGGTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: RSLGLLDSEKSRPSASLVQPLPF*SAGRFH
Trigger: GTGAAATCTACCAGCAGACCAAAATGGCAAAGGCTG...AACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp GGGAGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCATAGATCAGCAGCTGTaGAGGGCATTCAGTTACTTA +
Preference number: 4 (lower is better)
Translates to: GRRSLGLLDSEKSRPSASIDQQL*RAFSYL
Trigger: TAAGTAACTGAATGCCCTCCACAGCTGCTGATCTAT...GGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp ATCATACTAAGGGCTGAGGCAAACTGGACAATCCAAAGACGCCACCAGAAGAAGCAGCAACCCTGGGGATaGTCATCCAGCCTGTGGACT +
Preference number: 4 (lower is better)
Translates to: IILRAEANWTIQRRHQKKQQPWG*SSSLWT
Trigger: AGTCCACAGGCTGGATGACCATCCCCAGGGTTGCTG...CTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CTGAGGCAAACTGGACAATCCAAAGACGCCACCAGAAGAAGAAGCACCTCCATCGTGGCACATAACAGGTaGCCAGGACTTTGGAACCCA +
Preference number: 4 (lower is better)
Translates to: LRQTGQSKDATRRRSTSIVAHNR*PGLWNP
Trigger: TGGGTTCCAAAGTCCTGGCCACCTGTTATGTGCCAC...GATGGAGGTGCTTCTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp GGCCTCCTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCCATCTAAGGTGTGTATaGGGCATGAAGAGGGGCAAT +
Preference number: 4 (lower is better)
Translates to: GLLWRDPHLTMNKGCRIPHLRCV*GMKRGN
Trigger: ATTGCCCCTCTTCATGCCCCATACACACCTTAGATG...GGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAGGAGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp AGTGCACAAGCTCAAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATAGGGCAGGCCTCCTCTaGAGGGACCCTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: SAQAQTLIPGSSLSLCHNRAGLL*RDPHLT
Trigger: AGTGAGATGAGGGTCCCTCCAGAGGAGGCCTGCCCT...ATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTTGAGCTTGTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCTGTACATCTGGACGATaGGTTGTTTCACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLCTSGR*VVSLHA
Trigger: TGCATGGAGTGAAACAACTCATCGTCCAGATGTACA...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp CCTAATTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGAGTGGGATCAGTGGGCTaGCAGGAGCTACCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: PNLQLLVDFPNTMLPFPRVGSVG*QELPQE
Trigger: TTCCTGAGGTAGCTCCTGTCAGCCCACTGATCCCAC...TCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAATTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR TCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTGTCTCAGCCCTTACCTaGGCTGGGGGCCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: SVPHSKYSTATTLVLAWIVSALT*AGGLIP
Trigger: AGGAATTAGGCCCCCAGCTCAGGTAAGGGCTGAGAC...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp AGTGCACAAGCTCAAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATGGTGTGTATGGGGCATaGAGAGGGGCAATGTGGCAC +
Preference number: 4 (lower is better)
Translates to: SAQAQTLIPGSSLSLCHNGVYGA*RGAMWH
Trigger: GTGCCACATTGCCCCTCTTCATGCCCCATACACACC...ATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTTGAGCTTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp GCATTGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTCCTCTTCTCATCCTCAGGCAGAAGTTGCAGTaGGCTGAGATCATGCCACTA +
Preference number: 4 (lower is better)
Translates to: ALNRPELPWCSLFPLLILRQKLQ*AEIMPL
Trigger: TAGTGGCATGATCTCAGCTCACTGCAACTTCTGCCT...GAGGATGAGAAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp GATTTGGAGCATGGCAATTGGGGTAGGAGTATCATACTAAGGGCTGAGGCAAACTACCACCTTCTGCTCTaGCCCTTCCCGGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: DLEHGNWGRSIILRAEANYHLLL*PFPEIV
Trigger: GACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTA...GTTTGCCTCAGCCCTTAGTATGATACTCCTACCCCAATTGCCATGCTCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp GGGAGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCGAAGCACTATATATTTaGTCACATTCCCTCCAATGG +
Preference number: 4 (lower is better)
Translates to: GRRSLGLLDSEKSRPSASEALYI*SHSLQW
Trigger: CCATTGGAGGGAATGTGAGCAAATATATAGTGCTTC...GGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp ATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGGCAGAAGGTCCTTGGGTCTaGTGGATTCAGAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: IQCCPFPDQAIDQQLWRAEGPWV*WIQRRA
Trigger: TGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTC...TGCCCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp GTTCCATTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGGGAAGCCCAGCCTGGTaGTGCAGCTTTGGCCTCCCT +
Preference number: 4 (lower is better)
Translates to: VPFMHVSRSSCLTCHTDEGSPAW*CSFGLP
Trigger: AGGGAGGCCAAAGCTGCAGCACCAGGCTGGGCTTCC...CTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAATGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp TCTGGAGCCAGCTTCCACAGTAGCAACAGGACTGGAAGCCCAGCCTGGTGCTGCTCCACAATAGCCAGTTaGAAGCACTATATATTTGCT +
Preference number: 4 (lower is better)
Translates to: SGASFHSSNRTGSPAWCCSTIAS*KHYIFA
Trigger: AGCAAATATATAGTGCTTCCAACTGGCTATTGTGGA...GCAGCACCAGGCTGGGCTTCCAGTCCTGTTGCTACTGTGGAAGCTGGCTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp TTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGATCAAGCGTTGTTGCACACTCTaGCCCAGCTGCTCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: FAASSGLSQYNAALSQIKRCCTL*PSCSRK
Trigger: CTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACG...CTTGATCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp AGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCTTGATATGGCCCAAGGCTGGGTaGGGACTAAGGATACAGGCT +
Preference number: 4 (lower is better)
Translates to: RKAESATICYSSDAVTLIWPKAG*GLRIQA
Trigger: AGCCTGTATCCTTAGTCCCCACCCAGCCTTGGGCCA...TATCAAGGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTTTAGTAAGCAGAGTAAGATATaGGCAGGCCATGGGTCCGGC +
Preference number: 4 (lower is better)
Translates to: LWRDPHLTMNKGCRIPFSKQSKI*AGHGSG
Trigger: GCCGGACCCATGGCCTGCCCATATCTTACTCTGCTT...ACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTCTTCCTCAGCAACCCTaGGGATGGTCATCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SVPHSKYSTATTLVLAWILPQQP*GWSSSL
Trigger: CAGGCTGGATGACCATCCCCAGGGTTGCTGAGGAAG...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp AGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCTTGATATCCTGGCAAGGTACCTaGACACCATACCCCCAACCC +
Preference number: 4 (lower is better)
Translates to: RKAESATICYSSDAVTLISWQGT*TPYPQP
Trigger: GGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGA...TATCAAGGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp GGATCAAGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCCGGCCTGAGCTTCCCTaGTGCAGTTTGTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GSRKAESATICYSSDAVTRPELP*CSLFPL
Trigger: AAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCG...GGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTTGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp CTGGGGATGGTCATCCAGCCTGTGGACTTGCATAGCTTAGATGGCAGGAGACTCTTACAAGGAAGTCAATaGTCCCTTGGCACACAAATG +
Preference number: 4 (lower is better)
Translates to: LGMVIQPVDLHSLDGRRLLQGSQ*SLGTQM
Trigger: CATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAA...GAGTCTCCTGCCATCTAAGCTATGCAAGTCCACAGGCTGGATGACCATCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp GATTTGGAGCATGGCAATTGGGGTAGGAGTATCATACTAAGGGCTGAGGCAAACTGGGGGCCTAATTCCTaGCCTGTCAGACTTGGATAC +
Preference number: 4 (lower is better)
Translates to: DLEHGNWGRSIILRAEANWGPNS*PVRLGY
Trigger: GTATCCAAGTCTGACAGGTCAGGAATTAGGCCCCCA...GTTTGCCTCAGCCCTTAGTATGATACTCCTACCCCAATTGCCATGCTCCAAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp GTGCAGTTTGTTTCCTCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGAGACTCACTGCATCATaGGAGAAGAGAGGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: VQFVSSSHPLEDRTRQGRRLTAS*EKRGER
Trigger: TCTCTCCCCTCTCTTCTCTCATGATGCAGTGAGTCT...CCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGAGGAAACAAACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAATCCCATATCATTGCCTaGCTCAGGCGCCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQSHIIA*LRRRLA
Trigger: AGCCAGTCGGCGCCTGAGGCAGGCAATGATATGGGA...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp CCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTAACCTCCATTTCCCATATCATTaGCTGCCTCAGGCGCCGACT +
Preference number: 4 (lower is better)
Translates to: PTHPDMSGIESAAPRTNLHFPYH*LPQAPT
Trigger: AGTCGGCGCCTGAGGCAGGCAATGATATGGGAAATG...GAGGTTAGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp ATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTAGTCGTGTGTGTTTTTGTGTaGTTGCAGATGCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: MHLGDADPFWVNGGGCVVVCVFV*LQMHLG
Trigger: TCCCAGGTGCATCTGCAAGCACACAAAAACACACAC...GACTACACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp AGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGGGGTCGTTGTACATCTaGACGATGAGTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: RTEQGRVGPSVSRPAQLVGSLYI*TMSCFT
Trigger: AGTGAAACAACTCATCGTCCAGATGTACAACGACCC...CACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp ATGGCAGGAGACTCACTGCATCATGAGAGAAGAGAGGGGAGAGAGATGGAAGCAAAGTCCTCAGCATTCTaGCAGAGGAGCTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: MAGDSLHHERREGREMEAKSSAF*QRSLGK
Trigger: TTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTT...TGCTTCCATCTCTCTCCCCTCTCTTCTCTCATGATGCAGTGAGTCTCCTGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGTGGGCCCCGCAGGAGTaGGTGCTTGTAAGGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGWAPQE*VLVRRG
Trigger: TCCCCTCCTTACAAGCACCCACTCCTGCGGGGCCCA...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp TGGATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCGTAGGGAGCGGGTGGTaGGATCAGTGGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: WIHSNIFPLTLQTSKTESVGSGW*DQWADR
Trigger: CCTGTCAGCCCACTGATCCCACCACCCGCTCCCTAC...GGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGGCCTCAGGCGCCGACTaGCTCCCCTCCGCCATTTTT +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGASGAD*LPSAIF
Trigger: AAAAATGGCGGAGGGGAGCCAGTCGGCGCCTGAGGC...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp GGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTTTCACATTCCCTCCAATaGCATCATCATTTCCCATAT +
Preference number: 4 (lower is better)
Translates to: GPWVCWIQRRAGLVPPWFSHSLQ*HHHFPY
Trigger: ATATGGGAAATGATGATGCCATTGGAGGGAATGTGA...AAACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp GGGAGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCTCCACAATAGCCAGTTaGAAGCACTATATATTTGCT +
Preference number: 4 (lower is better)
Translates to: GRRSLGLLDSEKSRPSASSTIAS*KHYIFA
Trigger: AGCAAATATATAGTGCTTCCAACTGGCTATTGTGGA...GGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGTCAAACTCAGAGACCTaGTCCACCCGGCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLSNSET*STRPRL
Trigger: TAACCTGGGCCGGGTGGACCAGGTCTCTGAGTTTGA...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp GTGCAGTTTGTTTCCTCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGGGAGATTGTCAGGGCTaGTTATCGTCAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: VQFVSSSHPLEDRTRQGRGDCQG*LSSGGQ
Trigger: TTGACCTCCTGACGATAACCAGCCCTGACAATCTCC...CCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGAGGAAACAAACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CCTAATTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGAGGTCCTTGGGTCTGCTaGATTCAGAGAAGAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PNLQLLVDFPNTMLPFPRGPWVC*IQRRAG
Trigger: GCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACC...TCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAATTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp GGAATAGAAAGTGCAGCACCTAGGACTAACCTCAGCTCATACCCCTTCCCAGTGGATGCAGATCCATTTTaGGTGAATGGTGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GIESAAPRTNLSSYPFPVDADPF*VNGGGC
Trigger: ACAGCCTCCACCATTCACCCAAAATGGATCTGCATC...CACTGGGAAGGGGTATGAGCTGAGGTTAGTCCTAGGTGCTGCACTTTCTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp GATTTGGAGCATGGCAATTGGGGTAGGAGTATCATACTAAGGGCTGAGGCAAACAGGGCTGAGGCAAACTaGACAATCCAAAGACGCCAC +
Preference number: 4 (lower is better)
Translates to: DLEHGNWGRSIILRAEANRAEAN*TIQRRH
Trigger: GTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCT...GTTTGCCTCAGCCCTTAGTATGATACTCCTACCCCAATTGCCATGCTCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTTTAGTCCACTAAGTTGCAGTTaGCTGGTGGGACTAGCCCTA +
Preference number: 4 (lower is better)
Translates to: LWRDPHLTMNKGCRIPFSPLSCS*LVGLAL
Trigger: TAGGGCTAGTCCCACCAGCCAACTGCAACTTAGTGG...ACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCTTGATAAATGAGTGTTaGCTGTTGAGGGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLLINEC*LLRGGN
Trigger: GTTTCCACCCCTCAACAGCCAACACTCATTTATCAA...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 72 bp CCAAACACACATACAAACAGAGCCACTAAGTTGCAGTaGGCTGGTGGGACTAGCCCTAAGTCATGCCACGTT +
Preference number: 4 (lower is better)
Translates to: PNTHTNRATKLQ*AGGTSPKSCHV
Trigger: AACGTGGCATGACTTAGGGCTAGTCCCACCAGCCAACTGCAACTTAGTGGCTCTGTTTGTATGTGTGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp CCTAATTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGAGAGGGATCCAGCCAGTaGCGATTCAGATCAAATCCC +
Preference number: 4 (lower is better)
Translates to: PNLQLLVDFPNTMLPFPREGSSQ*RFRSNP
Trigger: GGGATTTGATCTGAATCGTCACTGGCTGGATCCCTC...TCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAATTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR TCA 90 bp GTTCCATTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGGTGGGATCAGTGGGCTaGCAGGAGCTACCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: VPFMHVSRSSCLTCHTDEVGSVG*QELPQE
Trigger: TTCCTGAGGTAGCTCCTGTCAGCCCACTGATCCCAC...CTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR TCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTGGGATCAGTGGGCTaGCAGGAGCTACCTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RESASMQLRYSDHIFKSTVGSVG*QELPQE
Trigger: TTCCTGAGGTAGCTCCTGTCAGCCCACTGATCCCAC...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp AGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTGAAAATGACCCTCTGTaGTTCTTTCACATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: RSLGLLDSEKSRPSASLVENDPL*FFHIFN
Trigger: GTTGAAAATGTGAAAGAATCACAGAGGGTCATTTTC...AACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR TCA 90 bp GGATCAAGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCAAGATGCACAGAGGATaGGAGGGGAAAGACAAGGAA +
Preference number: 4 (lower is better)
Translates to: GSRKAESATICYSSDAVTKMHRG*EGKDKE
Trigger: TTCCTTGTCTTTCCCCTCTCATCCTCTGTGCATCTT...GGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAACACTCACCAAGGGTTaGAAAAATGCTAAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQTLTKG*KNAKRA
Trigger: TGCTCTTTTAGCATTTTTTCAACCCTTGGTGAGTGT...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp AAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATATTATGGGAGAGCATGAGTGTTGGCTGTTaGGGGGTGGAAACCTTGGGC +
Preference number: 4 (lower is better)
Translates to: KLLFQAALCPFAIILWESMSVGC*GVETLG
Trigger: GCCCAAGGTTTCCACCCCTCAACAGCCAACACTCAT...GCTCTCCCATAATATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TTAGAAGGAGTCAAGATCATCAAGCTCTTCCTCAGCAACCCTGGGGATGGTCATGAAGTTGCAGTGAGCTaGGATCATGCCACTACACTC +
Preference number: 4 (lower is better)
Translates to: LEGVKIIKLFLSNPGDGHEVAVS*DHATTL
Trigger: GAGTGTAGTGGCATGATCTCAGCTCACTGCAACTTC...ATGACCATCCCCAGGGTTGCTGAGGAAGAGCTTGATGATCTTGACTCCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp CTGGGGATGGTCATCCAGCCTGTGGACTTGCATAGCTTAGATGGCAGGAGACTCCACCCTCACCCAGTTTaGCTAGTTCATATTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LGMVIQPVDLHSLDGRRLHPHPV*LVHIKN
Trigger: GTTTTTAATATGAACTAGTCAAACTGGGTGAGGGTG...GAGTCTCCTGCCATCTAAGCTATGCAAGTCCACAGGCTGGATGACCATCCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp TTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGATCAAGATGAATACCACCTTCTaGTCTGCCCCTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: FAASSGLSQYNAALSQIKMNTTF*SAPSRR
Trigger: TCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCAT...CTTGATCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGATGAATACCACCTTCTaGTCTGCCCCTTCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLMNTTF*SAPSRR
Trigger: TCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCAT...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCTCTTCTTGTCCCCTTTaGTGTTGGGGTAGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFSSCPL*CWGSCW
Trigger: CCAGCAACTACCCCAACAGCAAAGGGGACAAGAAGA...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp TGGGTGAATGGTGGAGGCTGTGTAGTCAGTAGGCAAAAAGCTAATACGTTCCTGTTGGGTGGCAGCCTTTaGCATTTTGGTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: WVNGGGCVVSRQKANTFLLGGSL*HFGLLV
Trigger: TACCAGCAGACCAAAATGGCAAAGGCTGCCACCCAA...CAGGAACGTATTAGCTTTTTGCCTACTGACTACACAGCCTCCACCATTCACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp TTAGAAGGAGTCAAGATCATCAAGCTCTTCCTCAGCAACCCTGGGGATGGTCATACAGAGCCACTAAGTTaGAGTTGGCTGGTGGGACTA +
Preference number: 4 (lower is better)
Translates to: LEGVKIIKLFLSNPGDGHTEPLS*SWLVGL
Trigger: TAGTCCCACCAGCCAACTGCAACTTAGTGGCTCTGT...ATGACCATCCCCAGGGTTGCTGAGGAAGAGCTTGATGATCTTGACTCCTTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CCAATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGATCAGGATTGAGCATTaGTGCGATCTTGAAGACCAG +
Preference number: 4 (lower is better)
Translates to: PIQCCPFPDQAIDQQLWRIRIEH*CDLEDQ
Trigger: CTGGTCTTCAAGATCGCACCAATGCTCAATCCTGAT...CCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTGGTAGGATGGACCCATaGAGAGGGATCCAGCCAGTG +
Preference number: 4 (lower is better)
Translates to: SKILSHCSLGCICPLVACGRMDP*RGIQPV
Trigger: CACTGGCTGGATCCCTCTCCATGGGTCCATCCTACC...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCAAAATGGCCTGCCTCTaGAACCGTTCCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFKMACL*NRSSSS
Trigger: TGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTT...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp ATCATACTAAGGGCTGAGGCAAACTGGACAATCCAAAGACGCCACCAGAAGAAGAAAATGGCCTGCCTCTaGAACCGTTCCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: IILRAEANWTIQRRHQKKKMACL*NRSSSS
Trigger: TGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTT...CTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTTGTCCCCTTTGCTGTTaGGGTAGTTGCTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SKILSHCSLGCICPLVACCPLCC*GSCWLG
Trigger: GCCCAGCCAGCAACTACCCCAACAGCAAAGGGGACA...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTGTAGGGAGCGGGTGGTaGGATCAGTGGGCTGACAGG +
Preference number: 4 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCVGSGW*DQWADR
Trigger: CCTGTCAGCCCACTGATCCCACCACCCGCTCCCTAC...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CAGATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTACAGCCTTTGCCATTTTaGTCTGCTGGTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: QMHLGDADPFWVNGGGCVQPLPF*SAGRFH
Trigger: GTGAAATCTACCAGCAGACCAAAATGGCAAAGGCTG...TACACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp AGTGCACAAGCTCAAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATGTAATCTCAGCACTTTaGGAGGCCGAAGCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SAQAQTLIPGSSLSLCHNVISAL*EAEAGG
Trigger: TCCACCTGCTTCGGCCTCCCAAAGTGCTGAGATTAC...ATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTTGAGCTTGTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp AAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATATTATGGGAGAGCGAGGGATCCAGCCAGTaGCGATTCAGATCAAATCCC +
Preference number: 4 (lower is better)
Translates to: KLLFQAALCPFAIILWESEGSSQ*RFRSNP
Trigger: GGGATTTGATCTGAATCGTCACTGGCTGGATCCCTC...GCTCTCCCATAATATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TGGGTGAATGGTGGAGGCTGTGTAGTCAGTAGGCAAAAAGCTAATACGTTCCTGCCCTCCCACACATCCTaGTATGTCAGGAATAGAAAG +
Preference number: 4 (lower is better)
Translates to: WVNGGGCVVSRQKANTFLPSHTS*YVRNRK
Trigger: CTTTCTATTCCTGACATATCAGGATGTGTGGGAGGG...CAGGAACGTATTAGCTTTTTGCCTACTGACTACACAGCCTCCACCATTCACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGGTCCAAAAAGGTTCTTaGCACATTCCGCCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLVQKGS*HIPPQL
Trigger: AAGCTGGGGCGGAATGTGGCAAGAACCTTTTTGGAC...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp TGGGTGAATGGTGGAGGCTGTGTAGTCAGTAGGCAAAAAGCTAATACGTTCCTGGTGTTTTTGTGTGCTTaGAGATGCACCTGGGAGATG +
Preference number: 4 (lower is better)
Translates to: WVNGGGCVVSRQKANTFLVFLCA*RCTWEM
Trigger: CATCTCCCAGGTGCATCTGCAAGCACACAAAAACAC...CAGGAACGTATTAGCTTTTTGCCTACTGACTACACAGCCTCCACCATTCACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCCCAGCAGAAAATGCATaGTCCTGTCCCCATAAGACC +
Preference number: 4 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSPAENA*SCPHKT
Trigger: GGTCTTATGGGGACAGGAGCATGCATTTTCTGCTGG...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp GTGCAGTTTGTTTCCTCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGATCAGGATTGAGCATTaGTGCGATCTTGAAGACCAG +
Preference number: 4 (lower is better)
Translates to: VQFVSSSHPLEDRTRQGRIRIEH*CDLEDQ
Trigger: CTGGTCTTCAAGATCGCACCAATGCTCAATCCTGAT...CCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGAGGAAACAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCCTCCAGGCTTGTTTTTaGGTCGTTGTACATCTGGAC +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFLQACF*VVVHLD
Trigger: GTCCAGATGTACAACGACCCAAAAACAAGCCTGGAG...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAGGGTGGTGGGATCAGTaGGCTGACAGGAGCTACCTC +
Preference number: 4 (lower is better)
Translates to: QACSLDTVTIYLSPPLISGWWDQ*ADRSYL
Trigger: GAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCC...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp TTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGCTTGAGTCAAACTCAGAGACCTaGTCCACCCGGCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: FMHVSRSSCLTCHTDELESNSET*STRPRL
Trigger: TAACCTGGGCCGGGTGGACCAGGTCTCTGAGTTTGA...CTCAAGCTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp TTGCAGATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTAAACATTTTTGGGTaGCAGCCTTTGCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: LQMHLGDADPFWVNGGGCVNIFG*QPLPFW
Trigger: CCAAAATGGCAAAGGCTGCCACCCAAAAATGTTTAC...ACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCATCTGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp ATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGGCACATTCAGTTACTTACTaGGTCGTTGTACATCTGGAC +
Preference number: 4 (lower is better)
Translates to: IQCCPFPDQAIDQQLWRAHSVTY*VVVHLD
Trigger: GTCCAGATGTACAACGACCCAGTAAGTAACTGAATG...TGCCCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp TTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGATCAAGTTGGGAGAAGGTCCTTaGGTCTGCTGGATTCAGAGA +
Preference number: 4 (lower is better)
Translates to: FAASSGLSQYNAALSQIKLGEGP*VCWIQR
Trigger: TCTCTGAATCCAGCAGACCCAAGGACCTTCTCCCAA...CTTGATCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp CCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTAACCTCGCTTGCAGATGCACCTaGGAGATGCAGATCCATTTT +
Preference number: 4 (lower is better)
Translates to: PTHPDMSGIESAAPRTNLACRCT*EMQIHF
Trigger: AAAATGGATCTGCATCTCCCAGGTGCATCTGCAAGC...GAGGTTAGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp TCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGGTGTCCAACAGGATGTaGAACATTGCTCTAACACCT +
Preference number: 4 (lower is better)
Translates to: SSHPLEDRTRQGRSISITVSNRM*NIALTP
Trigger: AGGTGTTAGAGCAATGTTCCACATCCTGTTGGACAC...CGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp TACTTCCGATGTTCCTGGCAAGGTACCTGGACACCATACCCCCAACCCTCCCAAGCCTTTTATGATTCCTaGTATGTACTAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: YFRCSWQGTWTPYPQPSQAFYDS*YVLMLC
Trigger: ACACAGCATTAGTACATACCAGGAATCATAAAAGGC...TTGGGAGGGTTGGGGGTATGGTGTCCAGGTACCTTGCCAGGAACATCGGAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TCCAGACCTCCAAAACTGAATCCACTATTTGTGAGAGGTTGCAGGAAAAGAGATGCATTGGTGCGATCTTaGAGACCAGGTATTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SRPPKLNPLFVRGCRKRDALVRS*RPGIPG
Trigger: TCCGGGAATACCTGGTCTTCAAGATCGCACCAATGC...ATCTCTTTTCCTGCAACCTCTCACAAATAGTGGATTCAGTTTTGGAGGTCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR TCA 90 bp ATCATACTAAGGGCTGAGGCAAACTGGACAATCCAAAGACGCCACCAGAAGAAGAGATGTTGCCATACATaGAGCCATTCATCATGGTGG +
Preference number: 4 (lower is better)
Translates to: IILRAEANWTIQRRHQKKRCCHT*SHSSWW
Trigger: CCACCATGATGAATGGCTTCATGTATGGCAACATCT...CTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTAAGCAGACTGCAAGATaGCCCTCAGTCTTGATGACT +
Preference number: 4 (lower is better)
Translates to: SVPHSKYSTATTLVLAWIKQTAR*PSVLMT
Trigger: AGTCATCAAGACTGAGGGTCATCTTGCAGTCTGCTT...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTTCTCCCCAAGTAGACTaGAAGTTCTGTGAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: SVPHSKYSTATTLVLAWISPQVD*KFCESG
Trigger: TCCTGACTCACAGAACTTTCAGTCTACTTGGGGAGA...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTACACAGGCAATAGGGTaGTGGCTTACAAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SVPHSKYSTATTLVLAWITQAIG*WLTRKS
Trigger: TGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGT...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp TTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGATCAAGAGTTGTTTCACTCCATaGAGGGTAGGATGGACCCAT +
Preference number: 4 (lower is better)
Translates to: FAASSGLSQYNAALSQIKSCFTP*RVGWTH
Trigger: ATGGGTCCATCCTACCCTGCATGGAGTGAAACAACT...CTTGATCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCAGTTGTTTCACTCCATaGAGGGTAGGATGGACCCAT +
Preference number: 4 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSSCFTP*RVGWTH
Trigger: ATGGGTCCATCCTACCCTGCATGGAGTGAAACAACT...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp AGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCTTGATAAGTTGTTTCACTCCATaGAGGGTAGGATGGACCCAT +
Preference number: 4 (lower is better)
Translates to: RKAESATICYSSDAVTLISCFTP*RVGWTH
Trigger: ATGGGTCCATCCTACCCTGCATGGAGTGAAACAACT...TATCAAGGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTCATTTCCCATATCATTaGCTGCCTCAGGCGCCGACT +
Preference number: 4 (lower is better)
Translates to: SKILSHCSLGCICPLVACHFPYH*LPQAPT
Trigger: AGTCGGCGCCTGAGGCAGGCAATGATATGGGAAATG...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGCTTTTGCATCTTCCTTaGCTGGCAATCACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLLLHLP*LAITLS
Trigger: GGAAAGGGTGATTGCCAGGCAAGGAAGATGCAAAAG...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp GGATCAAGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCACTAGCCCTAAGTCATaGCACGTTCAGAAAAGATGT +
Preference number: 4 (lower is better)
Translates to: GSRKAESATICYSSDAVTTSPKS*HVQKRC
Trigger: ACATCTTTTCTGAACGTGGCATGACTTAGGGCTAGT...GGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTTGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTCCATGCAGGGTAGGATaGACCCATGGAGAGGGATCC +
Preference number: 4 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCPCRVG*THGEGS
Trigger: GGATCCCTCTCCATGGGTCCATCCTACCCTGCATGG...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp AGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCTTGATACTCCAGGCTTGTTTTTaGGTCGTTGTACATCTGGAC +
Preference number: 4 (lower is better)
Translates to: RKAESATICYSSDAVTLILQACF*VVVHLD
Trigger: GTCCAGATGTACAACGACCCAAAAACAAGCCTGGAG...TATCAAGGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGAGCCATTCATCATGGTaGAGTGGGCATGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLSHSSW*SGHGCQ
Trigger: TTGACATCCATGCCCACTCCACCATGATGAATGGCT...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGAAGTCCTCAGCATTCTaGCAGAGGAGCTTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLKSSAF*QRSLGK
Trigger: TTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTT...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCGTTGAAGGGTCTTTGTaGTTCACTGAGCTCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFVEGSL*FTELFL
Trigger: CAAGAAGAGCTCAGTGAACCACAAAGACCCTTCAAC...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp ATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTAGTCTCACATTCCCTCCAATaGCATCATCATTTCCCATAT +
Preference number: 4 (lower is better)
Translates to: MHLGDADPFWVNGGGCVVSHSLQ*HHHFPY
Trigger: ATATGGGAAATGATGATGCCATTGGAGGGAATGTGA...GACTACACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCACGTTGTTGCACACTCTaGCCCAGCTGCTCCCGAAAG +
Preference number: 4 (lower is better)
Translates to: QACSLDTVTIYLSPPLISRCCTL*PSCSRK
Trigger: CTTTCGGGAGCAGCTGGGCCAGAGTGTGCAACAACG...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGGCATCTGTGCTCACCTaGTTCCGATCTCCTATTTTG +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLASVLT*FRSPIL
Trigger: CAAAATAGGAGATCGGAACCAGGTGAGCACAGATGC...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCGATGCATTTGCCCTTTaGTTGCATGTGTTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFDAFAL*LHVLLL
Trigger: CAGCAACAACACATGCAACCAAAGGGCAAATGCATC...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCTGCATCTTCCTTGCCTaGCAATCACCCTTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSCIFLA*QSPFPH
Trigger: ATGAGGAAAGGGTGATTGCCAGGCAAGGAAGATGCA...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp ATCATACTAAGGGCTGAGGCAAACTGGACAATCCAAAGACGCCACCAGAAGAAGGGAGTTAGCAGATTCTaGAGAAGGCATAGGCCATAT +
Preference number: 4 (lower is better)
Translates to: IILRAEANWTIQRRHQKKGVSRF*RRHRPY
Trigger: ATATGGCCTATGCCTTCTCCAGAATCTGCTAACTCC...CTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
3UTR CAA 72 bp TCAAACAGAACCCAGGTTAAATCACCCTTGCATGCATaGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SNRTQVKSPLHA*NRPELPWCSLF
Trigger: AAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGCATGCAAGGGTGATTTAACCTGGGTTCTGTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCTTACAAGGAAGTCAATaGTCCCTTGGCACACAAATG +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFLQGSQ*SLGTQM
Trigger: CATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAA...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGGCATTGGTGCGATCTTaGAGACCAGGTATTCCCGGA +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGALVRS*RPGIPG
Trigger: TCCGGGAATACCTGGTCTTCAAGATCGCACCAATGC...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp TTGCAGATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGAAAATGACCCTCTGTaGTTCTTTCACATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LQMHLGDADPFWVNGGGCENDPL*FFHIFN
Trigger: GTTGAAAATGTGAAAGAATCACAGAGGGTCATTTTC...ACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCATCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR TCA 90 bp TTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGCTTGAGGACTTCTTAAGCACCTaGGAGTCTGCAGTCTTACCG +
Preference number: 4 (lower is better)
Translates to: FMHVSRSSCLTCHTDELEDFLST*ESAVLP
Trigger: CGGTAAGACTGCAGACTCTCAGGTGCTTAAGAAGTC...CTCAAGCTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR TCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCGAAGCTAGAGAAGAGTaGTTAATTTCATTCCCCAGC +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFEAREE*LISFPS
Trigger: GCTGGGGAATGAAATTAATCACTCTTCTCTAGCTTC...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp ATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCACTTACCACCTTCTGCTCTaGCCCTTCCCGGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: IHSNIFPLTLQTSKTESTYHLLL*PFPEIV
Trigger: GACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTA...AGTGGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTTACCACCTTCTGCTCTaGCCCTTCCCGGAGATTGTC +
Preference number: 4 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCYHLLL*PFPEIV
Trigger: GACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTA...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CTCCAGACCTCCAAAACTGAATCCACTATTTGTGAGAGGTTGCAGGAAAAGAGAACACAGGCAATAGGGTaGTGGCTTACAAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LQTSKTESTICERLQEKRTQAIG*WLTRKS
Trigger: TGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGT...TCTCTTTTCCTGCAACCTCTCACAAATAGTGGATTCAGTTTTGGAGGTCTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTTTGGGAAAAATGGCCTaGCTCTGGAACCGTTCCTCA +
Preference number: 4 (lower is better)
Translates to: SKILSHCSLGCICPLVACLGKMA*LWNRSS
Trigger: TGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAA...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGTCTCGGCATGGGAATTaGCACCTTTTCAACCACGGG +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGSRHGN*HLFNHG
Trigger: CCCGTGGTTGAAAAGGTGGCAATTCCCATGCCGAGA...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CAATCAACATATGGCTCTTTGTCATCATTTCTGAAAACTAGCATGCAAAGGAGATCCCATATCATTGCCTaGCTCAGGCGCCGACTGGCT +
Preference number: 4 (lower is better)
Translates to: QSTYGSLSSFLKTSMQRRSHIIA*LRRRLA
Trigger: AGCCAGTCGGCGCCTGAGGCAGGCAATGATATGGGA...TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCTTGGGTGGCAGCCTTTaGCATTTTGGTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: RESASMQLRYSDHIFKSTLGGSL*HFGLLV
Trigger: TACCAGCAGACCAAAATGGCAAAGGCTGCCACCCAA...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp GTTCCATTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGTTGTGTGCTTGCAGATaGACCTGGGAGATGCAGATC +
Preference number: 4 (lower is better)
Translates to: VPFMHVSRSSCLTCHTDELCACR*TWEMQI
Trigger: GATCTGCATCTCCCAGGTGCATCTGCAAGCACACAA...CTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAATGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGCATTGTTCCCTAGGATaGATTTGCCCTTTGGTTGCA +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLHCSLG*ICPLVA
Trigger: TGCAACCAAAGGGCAAATGCATCCTAGGGAACAATG...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCCATGGTGACTCAGCCTaGTGTTTCCACAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: RESASMQLRYSDHIFKSTHGDSA*CFHRQE
Trigger: TTCCTGTCTGTGGAAACAGCAGGCTGAGTCACCATG...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTTTAGTGGTATTAAAGCAGACTaGAAGATGACCCTCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LWRDPHLTMNKGCRIPFSGIKAD*KMTLSL
Trigger: AAGACTGAGGGTCATCTTGCAGTCTGCTTTAATACC...ACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp AAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATATTATGGGAGAGCCAGGCAATAGGGTGCTaGCTTACAAGGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: KLLFQAALCPFAIILWESQAIGC*LTRKSM
Trigger: CATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTG...GCTCTCCCATAATATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp ATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCACTTCAAACTCAGAGACCTaGTCCACCCGGCCCAGGTTA +
Preference number: 4 (lower is better)
Translates to: IHSNIFPLTLQTSKTESTSNSET*STRPRL
Trigger: TAACCTGGGCCGGGTGGACCAGGTCTCTGAGTTTGA...AGTGGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCCAGCCTTTGCCATTTTaGTCTGCTGGTAGATTTCAC +
Preference number: 4 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSQPLPF*SAGRFH
Trigger: GTGAAATCTACCAGCAGACCAAAATGGCAAAGGCTG...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAATCCATTTTGGGTGAATaGTGGAGGCTGTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQSILGE*WRLCSQ
Trigger: CTGACTACACAGCCTCCACCATTCACCCAAAATGGA...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp TGGGTGAATGGTGGAGGCTGTGTAGTCAGTAGGCAAAAAGCTAATACGTTCCTGTTAGTATTAATCCTGTaGGTATCTGGACCCCTGTTC +
Preference number: 4 (lower is better)
Translates to: WVNGGGCVVSRQKANTFLLVLIL*VSGPLF
Trigger: GAACAGGGGTCCAGATACCCACAGGATTAATACTAA...CAGGAACGTATTAGCTTTTTGCCTACTGACTACACAGCCTCCACCATTCACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCTCTAAATCTGCATGCTaGGGTTTGAGGGAATCAGCA +
Preference number: 4 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSSKSAC*GLRESA
Trigger: TGCTGATTCCCTCAAACCCCAGCATGCAGATTTAGA...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTGTCTTTGTGGTTCACTaGGCTCTTCTTGTCCCCTTT +
Preference number: 4 (lower is better)
Translates to: SKILSHCSLGCICPLVACVFVVH*ALLVPF
Trigger: AAAGGGGACAAGAAGAGCTCAGTGAACCACAAAGAC...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp CAATCAACATATGGCTCTTTGTCATCATTTCTGAAAACTAGCATGCAAAGGAGAAGCAGGCTGTCATGGTaGCTCAGCCTGCTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: QSTYGSLSSFLKTSMQRRSRLSW*LSLLFP
Trigger: TGGAAACAGCAGGCTGAGTCACCATGACAGCCTGCT...TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp TGGGTGAATGGTGGAGGCTGTGTAGTCAGTAGGCAAAAAGCTAATACGTTCCTGGAAGCACTATATATTTaGTCACATTCCCTCCAATGG +
Preference number: 4 (lower is better)
Translates to: WVNGGGCVVSRQKANTFLEALYI*SHSLQW
Trigger: CCATTGGAGGGAATGTGAGCAAATATATAGTGCTTC...CAGGAACGTATTAGCTTTTTGCCTACTGACTACACAGCCTCCACCATTCACCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCGGTTGCATGTGTTGTTaGTGTTGTTTTGGATCAGAA +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFGCMCC*CCFGSE
Trigger: TTCTGATCCAAAACAACAGCAACAACACATGCAACC...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp AAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATATTATGGGAGAGCAAGGAAAGCAGAATCTaGCACGATCTGTTACAGCTC +
Preference number: 4 (lower is better)
Translates to: KLLFQAALCPFAIILWESKESRI*HDLLQL
Trigger: GAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTT...GCTCTCCCATAATATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CCA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAGGTGTTTCCCCTGGGTaGACTCGTCCTGTGATGAAT +
Preference number: 4 (lower is better)
Translates to: QACSLDTVTIYLSPPLISGVSPG*TRPVMN
Trigger: ATTCATCACAGGACGAGTCCACCCAGGGGAAACACC...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CCAAAACTGAATCCACTATTTGTGAGAGGTTGCAGGAAAAGAGATTGGGAGAAGCAGGCAATAGGGTGCTaGCTTACAAGGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: PKLNPLFVRGCRKRDWEKQAIGC*LTRKSM
Trigger: CATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTG...CTTCTCCCAATCTCTTTTCCTGCAACCTCTCACAAATAGTGGATTCAGTTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCCAGGCAATAGGGTGCTaGCTTACAAGGAAGTCAATG +
Preference number: 4 (lower is better)
Translates to: RESASMQLRYSDHIFKSTQAIGC*LTRKSM
Trigger: CATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTG...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAGGAGCTTGGGAAAAATaGCCTGCCTCTGGAACCGTT +
Preference number: 4 (lower is better)
Translates to: QACSLDTVTIYLSPPLISGAWEK*PASGTV
Trigger: AACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCC...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCATCTGGCAGAGGAGCTTaGGAAAAATGGCCTGCCTCT +
Preference number: 4 (lower is better)
Translates to: QACSLDTVTIYLSPPLISSGRGA*EKWPAS
Trigger: AGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGA...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CCTAATTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGAGTAAACATTTTTGGGTaGCAGCCTTTGCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: PNLQLLVDFPNTMLPFPRVNIFG*QPLPFW
Trigger: CCAAAATGGCAAAGGCTGCCACCCAAAAATGTTTAC...TCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAATTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAAAATCCTGTGGGTATCTaGACCCCTGTTCCATTTATG +
Preference number: 4 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQNPVGI*TPVPFM
Trigger: CATAAATGGAACAGGGGTCCAGATACCCACAGGATT...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCAACTACCGAGGAAATTaGGAAACAGCTCTCAAAACA +
Preference number: 4 (lower is better)
Translates to: PCLAITLSSLQISNAYIFNYRGN*ETALKT
Trigger: TGTTTTGAGAGCTGTTTCCCAATTTCCTCGGTAGTT...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTTTATTTGTGTTCCTCTaGGCAAAACGAACCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SKILSHCSLGCICPLVACLFVFL*AKRTQG
Trigger: CCCCTGGGTTCGTTTTGCCCAGAGGAACACAAATAA...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp CAATCAACATATGGCTCTTTGTCATCATTTCTGAAAACTAGCATGCAAAGGAGAGAGGGATCCAGCCAGTaGCGATTCAGATCAAATCCC +
Preference number: 4 (lower is better)
Translates to: QSTYGSLSSFLKTSMQRREGSSQ*RFRSNP
Trigger: GGGATTTGATCTGAATCGTCACTGGCTGGATCCCTC...TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp AAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATATTATGGGAGAGCGATCTGTTACAGCTCTaGTGCAGTGACCTTGATATT +
Preference number: 4 (lower is better)
Translates to: KLLFQAALCPFAIILWESDLLQL*CSDLDI
Trigger: AATATCAAGGTCACTGCATCAGAGCTGTAACAGATC...GCTCTCCCATAATATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp ATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCACTTTGGGTGGCAGCCTTTaGCATTTTGGTCTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: IHSNIFPLTLQTSKTESTLGGSL*HFGLLV
Trigger: TACCAGCAGACCAAAATGGCAAAGGCTGCCACCCAA...AGTGGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR GCA 90 bp GTTCCATTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGAAGCACCTGAGAGTCTaGAGTCTTACCGGAAACATT +
Preference number: 4 (lower is better)
Translates to: VPFMHVSRSSCLTCHTDEKHLRV*SLTGNI
Trigger: AATGTTTCCGGTAAGACTGCAGACTCTCAGGTGCTT...CTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCTCCCTAGGATGCATTTaGCCTTTGGTTGCATGTGTT +
Preference number: 4 (lower is better)
Translates to: RESASMQLRYSDHIFKSTSLGCI*PLVACV
Trigger: AACACATGCAACCAAAGGGCAAATGCATCCTAGGGA...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGGGGAATCAGCAAGCATaGAGCTTAGATACAGTGACC +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGGNQQA*SLDTVT
Trigger: GGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCC...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGTTTTCTAAATCTGCATaGTGGGGTTTGAGGGAATCA +
Preference number: 4 (lower is better)
Translates to: LSLCSNPHFREVILISRLFSKSA*WGLRES
Trigger: TGATTCCCTCAAACCCCAGCATGCAGATTTAGAAAA...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CTCCAGACCTCCAAAACTGAATCCACTATTTGTGAGAGGTTGCAGGAAAAGAGAAAGTCAATGATCCCTTaGCACACAAATGATGAGGGT +
Preference number: 4 (lower is better)
Translates to: LQTSKTESTICERLQEKRKSMIP*HTNDEG
Trigger: ACCCTCATCATTTGTGTGCCAAGGGATCATTGACTT...TCTCTTTTCCTGCAACCTCTCACAAATAGTGGATTCAGTTTTGGAGGTCTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGGGTCGTTGTACATCTaGACGATGAGTTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: RESASMQLRYSDHIFKSTGSLYI*TMSCFT
Trigger: AGTGAAACAACTCATCGTCCAGATGTACAACGACCC...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp CCAAAACTGAATCCACTATTTGTGAGAGGTTGCAGGAAAAGAGATTGGGAGAAGTTACAAGGAAGTCAATaGTCCCTTGGCACACAAATG +
Preference number: 4 (lower is better)
Translates to: PKLNPLFVRGCRKRDWEKLQGSQ*SLGTQM
Trigger: CATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAA...CTTCTCCCAATCTCTTTTCCTGCAACCTCTCACAAATAGTGGATTCAGTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR TCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGTGTACATCTGGACGATaGGTTGTTTCACTCCATGCA +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGCTSGR*VVSLHA
Trigger: TGCATGGAGTGAAACAACTCATCGTCCAGATGTACA...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAGATGTTGCCATACATaGAGCCATTCATCATGGTGG +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGRCCHT*SHSSWW
Trigger: CCACCATGATGAATGGCTTCATGTATGGCAACATCT...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTTCTTTAAAAAGGGGTTaGAGGGTCTTTGTGGTTCAC +
Preference number: 4 (lower is better)
Translates to: SKILSHCSLGCICPLVACSLKRG*RVFVVH
Trigger: GTGAACCACAAAGACCCTTCAACCCCTTTTTAAAGA...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCCTGAGCTTTTTGAGCTaGAGGCTTACAATTGATTTT +
Preference number: 4 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSLSFLS*RLTIDF
Trigger: AAAATCAATTGTAAGCCTTCAGCTCAAAAAGCTCAG...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp AAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATATTATGGGAGAGCCCTAGGTGCCTTTTATaGTTCCTGGTATGTACTAAT +
Preference number: 4 (lower is better)
Translates to: KLLFQAALCPFAIILWESPRCLL*FLVCTN
Trigger: ATTAGTACATACCAGGAATCATAAAAGGCACCTAGG...GCTCTCCCATAATATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR TCA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTTATATACTTGTCAAATaGAAATGTCCCAGAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SVPHSKYSTATTLVLAWIYILVK*KCPRAF
Trigger: GAAGGCTCTGGGACATTTTCATTTGACAAGTATATA...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp GTTCCATTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGTCAAGTTGTCTAACTTaGCACACTGATGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: VPFMHVSRSSCLTCHTDESSCLT*HTDELE
Trigger: CTCAAGCTCATCAGTGTGGCAAGTTAGACAACTTGA...CTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAATGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR GCA 90 bp GTTCCATTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGCCCCTGTTCCATTTATaGATGTGTCCAGATCAAGTT +
Preference number: 4 (lower is better)
Translates to: VPFMHVSRSSCLTCHTDEPLFHL*MCPDQV
Trigger: AACTTGATCTGGACACATGCATAAATGGAACAGGGG...CTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAATGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CCA 90 bp CAATCAACATATGGCTCTTTGTCATCATTTCTGAAAACTAGCATGCAAAGGAGAGGAGATTGTCAGGGCTaGTTATCGTCAGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: QSTYGSLSSFLKTSMQRRGDCQG*LSSGGQ
Trigger: TTGACCTCCTGACGATAACCAGCCCTGACAATCTCC...TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CAA 72 bp GTCTACAATACTGGCCCCCTCGAATCTGTCCTTCCATaGTCTACATTCAAGATCAAACTTCTTACATCTTTC +
Preference number: 4 (lower is better)
Translates to: VYNTGPLESVLP*STFKIKLLTSF
Trigger: GAAAGATGTAAGAAGTTTGATCTTGAATGTAGACAATGGAAGGACAGATTCGAGGGGGCCAGTATTGTAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAAACACAGGCAATAGGGTaGTGGCTTACAAGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKTQAIG*WLTRKS
Trigger: TGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGT...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR GCA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCACATCCTTCTGTCTTTTaGATCTTCCTTGCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: QACSLDTVTIYLSPPLISHPSVF*IFLAWQ
Trigger: TTGCCAGGCAAGGAAGATGCAAAAGACAGAAGGATG...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAAGTCAATGATCCCTTaGCACACAAATGATGAGGGT +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGKSMIP*HTNDEG
Trigger: ACCCTCATCATTTGTGTGCCAAGGGATCATTGACTT...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAATTCGCAGTCTCGGCATaGGAATTGCCACCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKFAVSA*ELPPFQ
Trigger: TTGAAAAGGTGGCAATTCCCATGCCGAGACTGCGAA...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAATTAATCCCTGTCACCTaGGATCTGGAGACCTTAACC +
Preference number: 4 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKLIPVT*DLETLT
Trigger: GGTTAAGGTCTCCAGATCCCAGGTGACAGGGATTAA...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGAAAATGACCCTCTGTaGTTCTTTCACATTTTCAAC +
Preference number: 4 (lower is better)
Translates to: RESASMQLRYSDHIFKSTENDPL*FFHIFN
Trigger: GTTGAAAATGTGAAAGAATCACAGAGGGTCATTTTC...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAAATCAGGATTGAGCATTaGTGCGATCTTGAAGACCAG +
Preference number: 4 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKIRIEH*CDLEDQ
Trigger: CTGGTCTTCAAGATCGCACCAATGCTCAATCCTGAT...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTGTAAACATTTTTGGGTaGCAGCCTTTGCCATTTTGG +
Preference number: 4 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCVNIFG*QPLPFW
Trigger: CCAAAATGGCAAAGGCTGCCACCCAAAAATGTTTAC...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR TCA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGCTTTGTCATCATTTCTaGAAACTAGCATGCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGLCHHF*KLACKG
Trigger: TCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAG...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CAA 72 bp GATGCATTTGCCCTTTGGTTGCATGTGTTGTTGCTGTaGTTTTGGATCAGAAAATACAAACACTGCATTTCT +
Preference number: 4 (lower is better)
Translates to: DAFALWLHVLLL*FWIRKYKHCIS
Trigger: AGAAATGCAGTGTTTGTATTTTCTGATCCAAAACAACAGCAACAACACATGCAACCAAAGGGCAAATGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CAA 72 bp TATGATTCCTGGTATGTACTAATGCTGTGTTTACTTTaGATAAATGAGTGTTGGCTGTTGAGGGGTGGAAAC +
Preference number: 4 (lower is better)
Translates to: YDSWYVLMLCLL*INECWLLRGGN
Trigger: GTTTCCACCCCTCAACAGCCAACACTCATTTATCAAAAGTAAACACAGCATTAGTACATACCAGGAATCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR GCA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAAGAAGCACTATATATTTaGTCACATTCCCTCCAATGG +
Preference number: 4 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKEALYI*SHSLQW
Trigger: CCATTGGAGGGAATGTGAGCAAATATATAGTGCTTC...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAATCACATTCCCTCCAATaGCATCATCATTTCCCATAT +
Preference number: 4 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKSHSLQ*HHHFPY
Trigger: ATATGGGAAATGATGATGCCATTGGAGGGAATGTGA...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CAA 72 bp GGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTaGCCACACCTTGGGAATTGCTACTACTGTTTTATT +
Preference number: 4 (lower is better)
Translates to: GTLLFTKMPIFS*PHLGNCYYCFI
Trigger: AATAAAACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
3UTR CAA 72 bp CAACATGACATTTGTAGCCAATCAACATATGGCTCTTaGTCATCATTTCTGAAAACTAGCATGCAAAGGAGA +
Preference number: 4 (lower is better)
Translates to: QHDICSQSTYGS*SSFLKTSMQRR
Trigger: TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTGGCTACAAATGTCATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CCA 90 bp CAATCAACATATGGCTCTTTGTCATCATTTCTGAAAACTAGCATGCAAAGGAGATCCACAATAGCCAGTTaGAAGCACTATATATTTGCT +
Preference number: 4 (lower is better)
Translates to: QSTYGSLSSFLKTSMQRRSTIAS*KHYIFA
Trigger: AGCAAATATATAGTGCTTCCAACTGGCTATTGTGGA...TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS GCA 90 bp CAGTGGGCTGACAGGAGCTACCTCAGGAAGACGCGGCACGACGGTTaGCTGGGCAACGGGCGGCAGGCGCGCGGGTGGCCGGCGCGCGGC +
Preference number: 5 (lower is better)
Translates to: QWADRSYLRKTRHDG*LGNGRQARGWPARG
Trigger: GCCGCGCGCCGGCCACCCGCGCGCCTGCCGCCCGTTGCCCAGGCAACCGTCGTGCCGCGTCTTCCTGAGGTAGCTCCTGTCAGCCCACTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS TCA 90 bp CGAAGACCGCGGGGCAGTAGGGAGCGGGTGGTGGGATCAGTGGGCTaGCAGGAGCTACCTCAGGAAGACGCGGCACGACGGTTGCCTGGG +
Preference number: 5 (lower is better)
Translates to: RRPRGSRERVVGSVG*QELPQEDAARRLPG
Trigger: CCCAGGCAACCGTCGTGCCGCGTCTTCCTGAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCCGCTCCCTACTGCCCCGCGGTCTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS CCA 90 bp TCACGCGAAGACCGCGGGGCAGTAGGGAGCGGGTGGTGGGATCAGTaGGCTGACAGGAGCTACCTCAGGAAGACGCGGCACGACGGTTGC +
Preference number: 5 (lower is better)
Translates to: SREDRGAVGSGWWDQ*ADRSYLRKTRHDGC
Trigger: GCAACCGTCGTGCCGCGTCTTCCTGAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCCGCTCCCTACTGCCCCGCGGTCTTCGCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371838.5
ENST00000371839.6
CDS CCA 90 bp TCTCCGAGCTCACGCGAAGACCGCGGGGCAGTAGGGAGCGGGTGGTaGGATCAGTGGGCTGACAGGAGCTACCTCAGGAAGACGCGGCAC +
Preference number: 5 (lower is better)
Translates to: SPSSREDRGAVGSGW*DQWADRSYLRKTRH
Trigger: GTGCCGCGTCTTCCTGAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCCGCTCCCTACTGCCCCGCGGTCTTCGCGTGAGCTCGGAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371838.5
ENST00000371839.6
CDS CCA 90 bp CAGTCTCCGAGCTCACGCGAAGACCGCGGGGCAGTAGGGAGCGGGTaGTGGGATCAGTGGGCTGACAGGAGCTACCTCAGGAAGACGCGG +
Preference number: 5 (lower is better)
Translates to: QSPSSREDRGAVGSG*WDQWADRSYLRKTR
Trigger: CCGCGTCTTCCTGAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCCGCTCCCTACTGCCCCGCGGTCTTCGCGTGAGCTCGGAGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS GCA 90 bp GGTGTTTCCCCTGGGTGGACTCGTCCTGTGATGAATACCACCTTCTaGTCTGCCCCTTCCCGGAGATTGTCAGGGCTGGTTATCGTCAGG +
Preference number: 5 (lower is better)
Translates to: GVSPGWTRPVMNTTF*SAPSRRLSGLVIVR
Trigger: CCTGACGATAACCAGCCCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS GCA 90 bp GGAAGTGTGGTCCAGGAGTCCACCGAGGAAGCGACGGCCAGTTCCTaGTTTCACAGCGTCCCGGTTAAAGGATGTGCTGGAATAGGAGAA +
Preference number: 5 (lower is better)
Translates to: GSVVQESTEEATASS*FHSVPVKGCAGIGE
Trigger: TTCTCCTATTCCAGCACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGCTTCCTCGGTGGACTCCTGGACCACACTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CCA 90 bp AAGGGTCTTTGTGGTTCACTGAGCTCTTCTTGTCCCCTTTGCTGTTaGGGTAGTTGCTGGCTGGGCCCCGCAGGAGTGGGTGCTTGTAAG +
Preference number: 5 (lower is better)
Translates to: KGLCGSLSSSCPLCC*GSCWLGPAGVGACK
Trigger: CTTACAAGCACCCACTCCTGCGGGGCCCAGCCAGCAACTACCCCAACAGCAAAGGGGACAAGAAGAGCTCAGTGAACCACAAAGACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334103.11
ENST00000371839.6
CDS-3UTR CAA 90 bp AGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGCCTCCGCCATTTTTGTaGTCCCTCAGTCTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: RRSLGLLDSEKSRPSASLPPPFL*SLSLRA
Trigger: AGCTCGGAGACTGAGGGACAACAAAAATGGCGGAGG...CAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp AGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTTCCCCTCCGCCATTTTaGTTGTCCCTCAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: RSLGLLDSEKSRPSASLVSPPPF*LSLSLR
Trigger: TCGGAGACTGAGGGACAACAAAAATGGCGGAGGGGA...AACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp AGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTTCATTTCCCATATCATaGCCTGCCTCAGGCGCCGAC +
Preference number: 5 (lower is better)
Translates to: RSLGLLDSEKSRPSASLVSFPIS*PASGAD
Trigger: GTCGGCGCCTGAGGCAGGCAATGATATGGGAAATGA...AACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp GGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGGTTTGTCAAGCTTTCGTTGTaGCACACTCTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GPWVCWIQRRAGLVPPWFVKLSL*HTLAQL
Trigger: CAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGAC...AAACCAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp CAGATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTACCTGGTGCTGCAGCTTaGGCCTCCCTCCCACACATC +
Preference number: 5 (lower is better)
Translates to: QMHLGDADPFWVNGGGCVPGAAA*ASLPHI
Trigger: GATGTGTGGGAGGGAGGCCAAAGCTGCAGCACCAGG...TACACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp CTGGGGATGGTCATCCAGCCTGTGGACTTGCATAGCTTAGATGGCAGGAGACTCCAGGTGGCCAGGACTTaGGAACCCACAGACCCTCTT +
Preference number: 5 (lower is better)
Translates to: LGMVIQPVDLHSLDGRRLQVART*EPTDPL
Trigger: AAGAGGGTCTGTGGGTTCCAAAGTCCTGGCCACCTG...GAGTCTCCTGCCATCTAAGCTATGCAAGTCCACAGGCTGGATGACCATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp AGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCCTGATTGGGAGAAGGTCCTaGGGTCTGCTGGATTCAGAG +
Preference number: 5 (lower is better)
Translates to: RRSLGLLDSEKSRPSASLIGRRS*GLLDSE
Trigger: CTCTGAATCCAGCAGACCCAAGGACCTTCTCCCAAT...CAGGGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTGACGCGGCACGACGGTaGCCTGGGCAACGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: SKILSHCSLGCICPLVACDAARR*PGQRAA
Trigger: TGCCGCCCGTTGCCCAGGCAACCGTCGTGCCGCGTC...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp GCATTGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTCCTCTTCTCATCCTCGCAGAGCCTACTCCCTaGGCCTTGCTGAGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: ALNRPELPWCSLFPLLILAEPTP*ALLSQV
Trigger: CACCTGACTCAGCAAGGCCAAGGGAGTAGGCTCTGC...GAGGATGAGAAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS CCA 90 bp TCAATGATCCCTTGGCACACAAATGATGAGGGTGTTTCCCCTGGGTaGACTCGTCCTGTGATGAATACCACCTTCTGCTCTGCCCCTTCC +
Preference number: 5 (lower is better)
Translates to: SMIPWHTNDEGVSPG*TRPVMNTTFCSAPS
Trigger: GGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAACACCCTCATCATTTGTGTGCCAAGGGATCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS-3UTR CAA 90 bp GGAATAGAAAGTGCAGCACCTAGGACTAACCTCAGCTCATACCCCTTCCCAGTGTCCCCTCCGCCATTTTaGTTGTCCCTCAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: GIESAAPRTNLSSYPFPVSPPPF*LSLSLR
Trigger: TCGGAGACTGAGGGACAACAAAAATGGCGGAGGGGA...CACTGGGAAGGGGTATGAGCTGAGGTTAGTCCTAGGTGCTGCACTTTCTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp GGAATAGAAAGTGCAGCACCTAGGACTAACCTCAGCTCATACCCCTTCCCAGTGGAGGTCAAGCTTTCGTaGTTGCACACTCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: GIESAAPRTNLSSYPFPVEVKLS*LHTLAQ
Trigger: CTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTC...CACTGGGAAGGGGTATGAGCTGAGGTTAGTCCTAGGTGCTGCACTTTCTATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp ATGGCAGGAGACTCACTGCATCATGAGAGAAGAGAGGGGAGAGAGATGGAAGCACACGACCTGCTCAGCTaGTGCATAGCCTCTCTACTC +
Preference number: 5 (lower is better)
Translates to: MAGDSLHHERREGREMEAHDLLS*CIASLL
Trigger: GAGTAGAGAGGCTATGCACAAGCTGAGCAGGTCGTG...TGCTTCCATCTCTCTCCCCTCTCTTCTCTCATGATGCAGTGAGTCTCCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS CCA 90 bp CTGGACGATGAGTTGTTTCACTCCATGCAGGGTAGGATGGACCCATaGAGAGGGATCCAGCCAGTGACGATTCAGATCAAATCCCATCAG +
Preference number: 5 (lower is better)
Translates to: LDDELFHSMQGRMDP*RGIQPVTIQIKSHQ
Trigger: CTGATGGGATTTGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS-3UTR CAA 90 bp CCAATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGAGCATTGGTGCGATCTaGAAGACCAGGTATTCCCGG +
Preference number: 5 (lower is better)
Translates to: PIQCCPFPDQAIDQQLWRSIGAI*KTRYSR
Trigger: CCGGGAATACCTGGTCTTCAAGATCGCACCAATGCT...CCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp CTCCCTCCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTGTCAAGCTTTCGTTGTaGCACACTCTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: LPPTHPDMSGIESAAPRTVKLSL*HTLAQL
Trigger: CAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGAC...AGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGGAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp GGATCAAGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCGTCAAGCTTTCGTTGTaGCACACTCTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GSRKAESATICYSSDAVTVKLSL*HTLAQL
Trigger: CAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGAC...GGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp GGGAGAAGGTCCTTGGGTCTGCTGGATTCAGAGAAGAGCAGGCCTAGTGCCTCCACTATTTGTGAGAGGTaGCAGGAAAAGAGATTGGGA +
Preference number: 5 (lower is better)
Translates to: GRRSLGLLDSEKSRPSASTICER*QEKRLG
Trigger: TCCCAATCTCTTTTCCTGCAACCTCTCACAAATAGT...GGAGGCACTAGGCCTGCTCTTCTCTGAATCCAGCAGACCCAAGGACCTTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp CTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTTTAGTGCCACTAAGTTGCAGTaGGCTGGTGGGACTAGCCCT +
Preference number: 5 (lower is better)
Translates to: LWRDPHLTMNKGCRIPFSATKLQ*AGGTSP
Trigger: AGGGCTAGTCCCACCAGCCAACTGCAACTTAGTGGC...ACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp GGATCAAGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCCCTACTCCCTTGGCCTaGCTGAGTCAGGTGGGTATT +
Preference number: 5 (lower is better)
Translates to: GSRKAESATICYSSDAVTPTPLA*LSQVGI
Trigger: AATACCCACCTGACTCAGCAAGGCCAAGGGAGTAGG...GGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS CCA 90 bp TCCTCAGCATTCTGGCAGAGGAGCTTGGGAAAAATGGCCTGCCTCTaGAACCGTTCCTCATCCTCAAAGATGTTGCCATACATGAAGCCA +
Preference number: 5 (lower is better)
Translates to: SSAFWQRSLGKMACL*NRSSSSKMLPYMKP
Trigger: TGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CCA 90 bp ATGTGCTGGAATAGGAGAAGTCCTCAGCATTCTGGCAGAGGAGCTTaGGAAAAATGGCCTGCCTCTGGAACCGTTCCTCATCCTCAAAGA +
Preference number: 5 (lower is better)
Translates to: MCWNRRSPQHSGRGA*EKWPASGTVPHPQR
Trigger: TCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTTCTCCTATTCCAGCACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CCA 90 bp GCAGCTGTGGAGGGCATTCAGTTACTTACTGGGTCGTTGTACATCTaGACGATGAGTTGTTTCACTCCATGCAGGGTAGGATGGACCCAT +
Preference number: 5 (lower is better)
Translates to: AAVEGIQLLTGSLYI*TMSCFTPCRVGWTH
Trigger: ATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAGTAAGTAACTGAATGCCCTCCACAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp GATTTGGAGCATGGCAATTGGGGTAGGAGTATCATACTAAGGGCTGAGGCAAACTTCTGGCAGAGGAGCTaGGGAAAAATGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: DLEHGNWGRSIILRAEANFWQRS*GKMACL
Trigger: GAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAA...GTTTGCCTCAGCCCTTAGTATGATACTCCTACCCCAATTGCCATGCTCCAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCGTCTCGGCATGGGAATaGCCACCTTTTCAACCACGG +
Preference number: 5 (lower is better)
Translates to: PCLAITLSSLQISNAYIFVSAWE*PPFQPR
Trigger: CCGTGGTTGAAAAGGTGGCAATTCCCATGCCGAGAC...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCTCCCCTCCGCCATTTTaGTTGTCCCTCAGTCTCCGA +
Preference number: 5 (lower is better)
Translates to: PCLAITLSSLQISNAYIFSPPPF*LSLSLR
Trigger: TCGGAGACTGAGGGACAACAAAAATGGCGGAGGGGA...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp ATCATACTAAGGGCTGAGGCAAACTGGACAATCCAAAGACGCCACCAGAAGAAGGAGGTCAAGCTTTCGTaGTTGCACACTCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: IILRAEANWTIQRRHQKKEVKLS*LHTLAQ
Trigger: CTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTC...CTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp ATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTAGTCAGATGCAGATCCATTTaGGGTGAATGGTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: MHLGDADPFWVNGGGCVVRCRSI*GEWWRL
Trigger: CAGCCTCCACCATTCACCCAAAATGGATCTGCATCT...GACTACACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp TTAGAAGGAGTCAAGATCATCAAGCTCTTCCTCAGCAACCCTGGGGATGGTCATCCTGACCTGTCAGACTaGGATACTCTCGGCTGGATG +
Preference number: 5 (lower is better)
Translates to: LEGVKIIKLFLSNPGDGHPDLSD*DTLGWM
Trigger: CATCCAGCCGAGAGTATCCAAGTCTGACAGGTCAGG...ATGACCATCCCCAGGGTTGCTGAGGAAGAGCTTGATGATCTTGACTCCTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp TTAGAAGGAGTCAAGATCATCAAGCTCTTCCTCAGCAACCCTGGGGATGGTCATCTCCTTCTAGGGCCATaGCCCTACTTCCGATGTTCC +
Preference number: 5 (lower is better)
Translates to: LEGVKIIKLFLSNPGDGHLLLGP*PYFRCS
Trigger: GGAACATCGGAAGTAGGGCAATGGCCCTAGAAGGAG...ATGACCATCCCCAGGGTTGCTGAGGAAGAGCTTGATGATCTTGACTCCTTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS GCA 90 bp GCGATCTTGAAGACCAGGTATTCCCGGAGGACACAGGCAATAGGGTaGTGGCTTACAAGGAAGTCAATGATCCCTTGGCACACAAATGAT +
Preference number: 5 (lower is better)
Translates to: AILKTRYSRRTQAIG*WLTRKSMIPWHTND
Trigger: ATCATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTGGTCTTCAAGATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS CCA 90 bp AATAGGAGAAGTCCTCAGCATTCTGGCAGAGGAGCTTGGGAAAAATaGCCTGCCTCTGGAACCGTTCCTCATCCTCAAAGATGTTGCCAT +
Preference number: 5 (lower is better)
Translates to: NRRSPQHSGRGAWEK*PASGTVPHPQRCCH
Trigger: ATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTTCTCCTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS-3UTR CAA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGCCTCCGCCATTTTTGTaGTCCCTCAGTCTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: LSLCSNPHFREVILISRLPPPFL*SLSLRA
Trigger: AGCTCGGAGACTGAGGGACAACAAAAATGGCGGAGG...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGGAGGTCAAGCTTTCGTaGTTGCACACTCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: LSLCSNPHFREVILISRLEVKLS*LHTLAQ
Trigger: CTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTC...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp GGAATAGAAAGTGCAGCACCTAGGACTAACCTCAGCTCATACCCCTTCCCAGTGCTAATACGTTCCTGTTaGTCCAGAGCCTCAGTGACT +
Preference number: 5 (lower is better)
Translates to: GIESAAPRTNLSSYPFPVLIRSC*SRASVT
Trigger: AGTCACTGAGGCTCTGGACAAACAGGAACGTATTAG...CACTGGGAAGGGGTATGAGCTGAGGTTAGTCCTAGGTGCTGCACTTTCTATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp GATTTGGAGCATGGCAATTGGGGTAGGAGTATCATACTAAGGGCTGAGGCAAACTGGCCTGGGAAAGATTaGGAGCATGGCAATTGGGGT +
Preference number: 5 (lower is better)
Translates to: DLEHGNWGRSIILRAEANWPGKD*EHGNWG
Trigger: ACCCCAATTGCCATGCTCCAAATCTTTCCCAGGCCA...GTTTGCCTCAGCCCTTAGTATGATACTCCTACCCCAATTGCCATGCTCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp ATCATACTAAGGGCTGAGGCAAACTGGACAATCCAAAGACGCCACCAGAAGAAGAATGAGTGTTGGCTGTaGAGGGGTGGAAACCTTGGG +
Preference number: 5 (lower is better)
Translates to: IILRAEANWTIQRRHQKKNECWL*RGGNLG
Trigger: CCCAAGGTTTCCACCCCTCAACAGCCAACACTCATT...CTTCTTCTGGTGGCGTCTTTGGATTGTCCAGTTTGCCTCAGCCCTTAGTATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp TCAGTTCCACATTCTAAGTATTCTACAGCCACCACTCTGGTCTTGGCCTGGATTTCACCCTTGCATGCATaGAATCGGCCTGAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SVPHSKYSTATTLVLAWISPLHA*NRPELP
Trigger: GGGAAGCTCAGGCCGATTCAATGCATGCAAGGGTGA...AATCCAGGCCAAGACCAGAGTGGTGGCTGTAGAATACTTAGAATGTGGAACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS CCA 90 bp ATCTTGAAGACCAGGTATTCCCGGAGGACACAGGCAATAGGGTGCTaGCTTACAAGGAAGTCAATGATCCCTTGGCACACAAATGATGAG +
Preference number: 5 (lower is better)
Translates to: ILKTRYSRRTQAIGC*LTRKSMIPWHTNDE
Trigger: CTCATCATTTGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTGGTCTTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS CCA 90 bp ATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTaGAGGGCATTCAGTTACTTACTGGGTCGTTGTACATCTGGACGA +
Preference number: 5 (lower is better)
Translates to: IQCCPFPDQAIDQQL*RAFSYLLGRCTSGR
Trigger: TCGTCCAGATGTACAACGACCCAGTAAGTAACTGAATGCCCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAACCTCCGCCATTTTTGTaGTCCCTCAGTCTCCGAGCT +
Preference number: 5 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQPPPFL*SLSLRA
Trigger: AGCTCGGAGACTGAGGGACAACAAAAATGGCGGAGG...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp ATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGGCATTACTTACTGGGTCGTaGTACATCTGGACGATGAGT +
Preference number: 5 (lower is better)
Translates to: IQCCPFPDQAIDQQLWRALLTGS*YIWTMS
Trigger: ACTCATCGTCCAGATGTACAACGACCCAGTAAGTAA...TGCCCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp CCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTAACCTCGCCACACTGATGAGCTaGAGTTCTCCCAACAGCTTT +
Preference number: 5 (lower is better)
Translates to: PTHPDMSGIESAAPRTNLATLMS*SSPNSF
Trigger: AAAGCTGTTGGGAGAACTCAAGCTCATCAGTGTGGC...GAGGTTAGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp CATAATATCTCTGTGTCCAACAGGATGTGGAACATTGCTCTAACACCTGGCCTAAGCATTGGTGCGATCTaGAAGACCAGGTATTCCCGG +
Preference number: 5 (lower is better)
Translates to: HNISVSNRMWNIALTPGLSIGAI*KTRYSR
Trigger: CCGGGAATACCTGGTCTTCAAGATCGCACCAATGCT...TAGGCCAGGTGTTAGAGCAATGTTCCACATCCTGTTGGACACAGAGATATTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp TTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGATCAAGCATCTGGACGATGAGTaGTTTCACTCCATGCAGGGT +
Preference number: 5 (lower is better)
Translates to: FAASSGLSQYNAALSQIKHLDDE*FHSMQG
Trigger: ACCCTGCATGGAGTGAAACAACTCATCGTCCAGATG...CTTGATCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp GTGCAGTTTGTTTCCTCTTCTCATCCTCTAGAGGACAGAACAAGGCAGGGTAGGCTTGTTTTTGGGTCGTaGTACATCTGGACGATGAGT +
Preference number: 5 (lower is better)
Translates to: VQFVSSSHPLEDRTRQGRLVFGS*YIWTMS
Trigger: ACTCATCGTCCAGATGTACAACGACCCAAAAACAAG...CCTACCCTGCCTTGTTCTGTCCTCTAGAGGATGAGAAGAGGAAACAAACTGCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp AGGACAGAACAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGTATAAAACTCCAGGCTaGTTTTTGGGTCGTTGTACA +
Preference number: 5 (lower is better)
Translates to: RTEQGRVGPSVSRPAQLVYKTPG*FLGRCT
Trigger: TGTACAACGACCCAAAAACAAGCCTGGAGTTTTATA...CACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTGTTCTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp TTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGCTTGAGTCATTTCCCATATCATaGCCTGCCTCAGGCGCCGAC +
Preference number: 5 (lower is better)
Translates to: FMHVSRSSCLTCHTDELESFPIS*PASGAD
Trigger: GTCGGCGCCTGAGGCAGGCAATGATATGGGAAATGA...CTCAAGCTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp ATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTGTAGTCGTCCACAATAGCCAGTaGGAAGCACTATATATTTGC +
Preference number: 5 (lower is better)
Translates to: MHLGDADPFWVNGGGCVVVHNSQ*EALYIC
Trigger: GCAAATATATAGTGCTTCCAACTGGCTATTGTGGAC...GACTACACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp CCAATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGTTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: PIQCCPFPDQAIDQQLWRFSTVK*NQTRKR
Trigger: ACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAA...CCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp TTGCAGATGCACCTGGGAGATGCAGATCCATTTTGGGTGAATGGTGGAGGCTGTATCCATGTTTCTCTTTaGCAGGCTGTCAAGGTAATG +
Preference number: 5 (lower is better)
Translates to: LQMHLGDADPFWVNGGGCIHVSL*QAVKVM
Trigger: CATTACCTTGACAGCCTGCAAAAGAGAAACATGGAT...ACAGCCTCCACCATTCACCCAAAATGGATCTGCATCTCCCAGGTGCATCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp ATACAATGCTGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTGGAGGGCAATCCATGTTTCTCTTTaGCAGGCTGTCAAGGTAATG +
Preference number: 5 (lower is better)
Translates to: IQCCPFPDQAIDQQLWRAIHVSL*QAVKVM
Trigger: CATTACCTTGACAGCCTGCAAAAGAGAAACATGGAT...TGCCCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCAGCATTGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp CCCACACATCCTGATATGTCAGGAATAGAAAGTGCAGCACCTAGGACTAACCTCTGTGTTTTTGTGTGCTaGCAGATGCACCTGGGAGAT +
Preference number: 5 (lower is better)
Translates to: PTHPDMSGIESAAPRTNLCVFVC*QMHLGD
Trigger: ATCTCCCAGGTGCATCTGCAAGCACACAAAAACACA...GAGGTTAGTCCTAGGTGCTGCACTTTCTATTCCTGACATATCAGGATGTGTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGGCATCCTTCTGTCTTTaGCATCTTCCTTGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: LSLCSNPHFREVILISRLASFCL*HLPCLA
Trigger: TGCCAGGCAAGGAAGATGCAAAAGACAGAAGGATGC...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp GCATTGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTCCTCTTCTCATCCTCACTTCAGACTTATCATaGAGTCTGAAGTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: ALNRPELPWCSLFPLLILTSDLS*SLKSFS
Trigger: GCTGAAGGACTTCAGACTCAATGATAAGTCTGAAGT...GAGGATGAGAAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp CAAGGCAGGGTAGGTCCATCAGTATCACGACCTGCTCAGCTTGTGCATAGCCTCGAATCTGTCCTTCCATaGTCTACATTCAAGATCAAA +
Preference number: 5 (lower is better)
Translates to: QGRVGPSVSRPAQLVHSLESVLP*STFKIK
Trigger: TTTGATCTTGAATGTAGACAATGGAAGGACAGATTC...GAGGCTATGCACAAGCTGAGCAGGTCGTGATACTGATGGACCTACCCTGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS TCA 90 bp CCTGCCTCTGGAACCGTTCCTCATCCTCAAAGATGTTGCCATACATaGAGCCATTCATCATGGTGGAGTGGGCATGGATGTCAATATAAA +
Preference number: 5 (lower is better)
Translates to: PASGTVPHPQRCCHT*SHSSWWSGHGCQYK
Trigger: TTTATATTGACATCCATGCCCACTCCACCATGATGAATGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CCA 90 bp AATAGCCAGTTGGAAGCACTATATATTTGCTCACATTCCCTCCAATaGCATCATCATTTCCCATATCATTGCCTGCCTCAGGCGCCGACT +
Preference number: 5 (lower is better)
Translates to: NSQLEALYICSHSLQ*HHHFPYHCLPQAPT
Trigger: AGTCGGCGCCTGAGGCAGGCAATGATATGGGAAATGATGATGCCATTGGAGGGAATGTGAGCAAATATATAGTGCTTCCAACTGGCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS-3UTR CAA 90 bp AGTGCACAAGCTCAAACTCTTATTCCAGGCAGCTCTCTGTCCCTTTGCCATAATACTCCAGGCTTGTTTTaGGGTCGTTGTACATCTGGA +
Preference number: 5 (lower is better)
Translates to: SAQAQTLIPGSSLSLCHNTPGLF*GRCTSG
Trigger: TCCAGATGTACAACGACCCAAAAACAAGCCTGGAGT...ATTATGGCAAAGGGACAGAGAGCTGCCTGGAATAAGAGTTTGAGCTTGTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGTTCTGGCAGAGGAGCTaGGGAAAAATGGCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGFWQRS*GKMACL
Trigger: GAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAA...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp GGATCAAGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCGCTGTCAAGGTAATGTaGGAAGCGAGTGTATGTATA +
Preference number: 5 (lower is better)
Translates to: GSRKAESATICYSSDAVTAVKVM*EASVCI
Trigger: TATACATACACTCGCTTCCAACATTACCTTGACAGC...GGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGGGATGCATTTGCCCTTaGGTTGCATGTGTTGTTGCT +
Preference number: 5 (lower is better)
Translates to: LSLCSNPHFREVILISRLGCICP*VACVVA
Trigger: AGCAACAACACATGCAACCAAAGGGCAAATGCATCC...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGTCTTTTGCATCTTCCTaGCCTGGCAATCACCCTTTC +
Preference number: 5 (lower is better)
Translates to: LSLCSNPHFREVILISRLSFASS*PGNHPF
Trigger: GAAAGGGTGATTGCCAGGCAAGGAAGATGCAAAAGA...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp AGGAAAGCAGAATCTGCCACGATCTGTTACAGCTCTGATGCAGTGACCTTGATACAGGTTAAATCACCCTaGCATGCATTGAATCGGCCT +
Preference number: 5 (lower is better)
Translates to: RKAESATICYSSDAVTLIQVKSP*HALNRP
Trigger: AGGCCGATTCAATGCATGCAAGGGTGATTTAACCTG...TATCAAGGTCACTGCATCAGAGCTGTAACAGATCGTGGCAGATTCTGCTTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS GCA 90 bp GGTCATAAGCCTCAATGTACCATTTACCTGCAGACTTTCTTCCATTaGTATCACAGGGGCCTACTTCTTTACATCCAGGATATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: GHKPQCTIYLQTFFH*YHRGLLLYIQDMPK
Trigger: CTTGGGCATATCCTGGATGTAAAGAAGTAGGCCCCTGTGATAGCAATGGAAGAAAGTCTGCAGGTAAATGGTACATTGAGGCTTATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497451.1
CDS-3UTR CAA 90 bp CTCTGGAGGGACCCTCATCTCACTATGAATAAGGGTTGCAGAATCCCCTTTAGTTCATCCTCAAAGATGTaGCCATACATGAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: LWRDPHLTMNKGCRIPFSSSSKM*PYMKPF
Trigger: GAATGGCTTCATGTATGGCAACATCTTTGAGGATGA...ACTAAAGGGGATTCTGCAACCCTTATTCATAGTGAGATGAGGGTCCCTCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS-3UTR CAA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCGTCCACAATAGCCAGTaGGAAGCACTATATATTTGC +
Preference number: 5 (lower is better)
Translates to: PCLAITLSSLQISNAYIFVHNSQ*EALYIC
Trigger: GCAAATATATAGTGCTTCCAACTGGCTATTGTGGAC...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTGTCAAGCTTTCGTTGTaGCACACTCTGGCCCAGCTG +
Preference number: 5 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCVKLSL*HTLAQL
Trigger: CAGCTGGGCCAGAGTGTGCAACAACGAAAGCTTGAC...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp ATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCACTGAGGTCAAGCTTTCGTaGTTGCACACTCTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: IHSNIFPLTLQTSKTESTEVKLS*LHTLAQ
Trigger: CTGGGCCAGAGTGTGCAACAACGAAAGCTTGACCTC...AGTGGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp CCTTGCCTGGCAATCACCCTTTCCTCATTGCAGATTAGCAATGCCTACATCTTCAAACTACCGAGGAAATaGGGAAACAGCTCTCAAAAC +
Preference number: 5 (lower is better)
Translates to: PCLAITLSSLQISNAYIFKLPRK*GNSSQN
Trigger: GTTTTGAGAGCTGTTTCCCAATTTCCTCGGTAGTTT...GAAGATGTAGGCATTGCTAATCTGCAATGAGGAAAGGGTGATTGCCAGGCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGATGCCAATATTTAGCTaGCCACACCTTGGGAATTGC +
Preference number: 5 (lower is better)
Translates to: LSLCSNPHFREVILISRLMPIFS*PHLGNC
Trigger: GCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCAT...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp GCATTGAATCGGCCTGAGCTTCCCTGGTGCAGTTTGTTTCCTCTTCTCATCCTCATGCTGTGTTTACTTTaGATAAATGAGTGTTGGCTG +
Preference number: 5 (lower is better)
Translates to: ALNRPELPWCSLFPLLILMLCLL*INECWL
Trigger: CAGCCAACACTCATTTATCAAAAGTAAACACAGCAT...GAGGATGAGAAGAGGAAACAAACTGCACCAGGGAAGCTCAGGCCGATTCAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS GCA 90 bp TCTCTGGACTTCTATTTCTTTATTTCGCAGTCTCGGCATGGGAATTaGCACCTTTTCAACCACGGGGTTCAGCCGATAATAGTCCAAAAA +
Preference number: 5 (lower is better)
Translates to: SLDFYFFISQSRHGN*HLFNHGVQPIIVQK
Trigger: TTTTTGGACTATTATCGGCTGAACCCCGTGGTTGAAAAGGTGGCAATTCCCATGCCGAGACTGCGAAATAAAGAAATAGAAGTCCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334103.11
ENST00000371839.6
CDS-3UTR CAA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAATCATTTCCCATATCATaGCCTGCCTCAGGCGCCGAC +
Preference number: 5 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKSFPIS*PASGAD
Trigger: GTCGGCGCCTGAGGCAGGCAATGATATGGGAAATGA...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CCTAATTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGAGTCCACAATAGCCAGTaGGAAGCACTATATATTTGC +
Preference number: 5 (lower is better)
Translates to: PNLQLLVDFPNTMLPFPRVHNSQ*EALYIC
Trigger: GCAAATATATAGTGCTTCCAACTGGCTATTGTGGAC...TCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAATTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCTTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSFSTVK*NQTRKR
Trigger: ACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAA...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CTGGGCAAAACGAACCCAGGGGAGAAGCTGTATATACAACATGACATTTGTAGCGCTGTCAAGGTAATGTaGGAAGCGAGTGTATGTATA +
Preference number: 5 (lower is better)
Translates to: LGKTNPGEKLYIQHDICSAVKVM*EASVCI
Trigger: TATACATACACTCGCTTCCAACATTACCTTGACAGC...GCTACAAATGTCATGTTGTATATACAGCTTCTCCCCTGGGTTCGTTTTGCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CTCTCCCTGTGTTCTAATCCTCATTTCCGGGAGGTCATTTTAATTAGCAGGCTGATCCATGTTTCTCTTTaGCAGGCTGTCAAGGTAATG +
Preference number: 5 (lower is better)
Translates to: LSLCSNPHFREVILISRLIHVSL*QAVKVM
Trigger: CATTACCTTGACAGCCTGCAAAAGAGAAACATGGAT...CAGCCTGCTAATTAAAATGACCTCCCGGAAATGAGGATTAGAACACAGGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS TCA 90 bp TATCCGTATCAGAAATTGGTATTTAGAATAAGGCTTATAACACCCTaGCCTCAGGGCTTAGTGCTTGGGAGCAGGCCCAACTTACTCATT +
Preference number: 5 (lower is better)
Translates to: YPYQKLVFRIRLITP*PQGLVLGSRPNLLI
Trigger: AATGAGTAAGTTGGGCCTGCTCCCAAGCACTAAGCCCTGAGGTCAGGGTGTTATAAGCCTTATTCTAAATACCAATTTCTGATACGGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497451.1
CDS-3UTR CAA 90 bp CAATCAACATATGGCTCTTTGTCATCATTTCTGAAAACTAGCATGCAAAGGAGAAGCATTGGTGCGATCTaGAAGACCAGGTATTCCCGG +
Preference number: 5 (lower is better)
Translates to: QSTYGSLSSFLKTSMQRRSIGAI*KTRYSR
Trigger: CCGGGAATACCTGGTCTTCAAGATCGCACCAATGCT...TCTCCTTTGCATGCTAGTTTTCAGAAATGATGACAAAGAGCCATATGTTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTCTTGTTTTTGGGTCGTaGTACATCTGGACGATGAGT +
Preference number: 5 (lower is better)
Translates to: SKILSHCSLGCICPLVACLVFGS*YIWTMS
Trigger: ACTCATCGTCCAGATGTACAACGACCCAAAAACAAG...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAAAGTCCAAAAAGGTTCTaGCCACATTCCGCCCCAGCT +
Preference number: 5 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKSPKRF*PHSAPA
Trigger: AGCTGGGGCGGAATGTGGCAAGAACCTTTTTGGACT...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAAGGGGTTGAAGGGTCTTaGTGGTTCACTGAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKGVEGS*WFTELF
Trigger: GAAGAGCTCAGTGAACCACAAAGACCCTTCAACCCC...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp TTAATCCTGTGGGTATCTGGACCCCTGTTCCATTTATGCATGTGTCCAGATCAAGCTGTCAAGGTAATGTaGGAAGCGAGTGTATGTATA +
Preference number: 5 (lower is better)
Translates to: LILWVSGPLFHLCMCPDQAVKVM*EASVCI
Trigger: TATACATACACTCGCTTCCAACATTACCTTGACAGC...TTGATCTGGACACATGCATAAATGGAACAGGGGTCCAGATACCCACAGGATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp CATAATATCTCTGTGTCCAACAGGATGTGGAACATTGCTCTAACACCTGGCCTAATCCATGTTTCTCTTTaGCAGGCTGTCAAGGTAATG +
Preference number: 5 (lower is better)
Translates to: HNISVSNRMWNIALTPGLIHVSL*QAVKVM
Trigger: CATTACCTTGACAGCCTGCAAAAGAGAAACATGGAT...TAGGCCAGGTGTTAGAGCAATGTTCCACATCCTGTTGGACACAGAGATATTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416121.5
CDS GCA 90 bp GCTTTTATTAGATGCTGGGTCATAAGCCTCAATGTACCATTTACCTaGAGACTTTCTTCCATTGCTATCACAGGGGCCTACTTCTTTACA +
Preference number: 5 (lower is better)
Translates to: AFIRCWVISLNVPFT*RLSSIAITGAYFFT
Trigger: TGTAAAGAAGTAGGCCCCTGTGATAGCAATGGAAGAAAGTCTGCAGGTAAATGGTACATTGAGGCTTATGACCCAGCATCTAATAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497451.1
CDS CCA 90 bp ATCAAAGATAAGATGTCCTTTCTTGGGCTGTCCACAATAGCCAGTTaGAAGCACTATATATTTGCTCACATTCCCTCCAATGGCATCATC +
Preference number: 5 (lower is better)
Translates to: IKDKMSFLGLSTIAS*KHYIFAHIPSNGII
Trigger: GATGATGCCATTGGAGGGAATGTGAGCAAATATATAGTGCTTCCAACTGGCTATTGTGGACAGCCCAAGAAAGGACATCTTATCTTTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
ENST00000497451.1
CDS-3UTR CAA 90 bp AGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAAACATCTGGACGATGAGTaGTTTCACTCCATGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SMQLRYSDHIFKSTVDFKHLDDE*FHSMQG
Trigger: ACCCTGCATGGAGTGAAACAACTCATCGTCCAGATG...TTTGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAACTCCAGGCTTGTTTTaGGGTCGTTGTACATCTGGA +
Preference number: 5 (lower is better)
Translates to: QACSLDTVTIYLSPPLISTPGLF*GRCTSG
Trigger: TCCAGATGTACAACGACCCAAAAACAAGCCTGGAGT...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp GTTCCATTTATGCATGTGTCCAGATCAAGTTGTCTAACTTGCCACACTGATGAGTTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: VPFMHVSRSSCLTCHTDEFSTVK*NQTRKR
Trigger: ACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAA...CTCATCAGTGTGGCAAGTTAGACAACTTGATCTGGACACATGCATAAATGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371836.1
CDS-3UTR CAA 90 bp TTTGCAGCTTCTAGTGGACTTTCCCAATACAATGCTGCCCTTTCCCAGATCAAGCTATGTATTCCTAATTaGCAGCTTCTAGTGGACTTT +
Preference number: 5 (lower is better)
Translates to: FAASSGLSQYNAALSQIKLCIPN*QLLVDF
Trigger: AAAGTCCACTAGAAGCTGCAAATTAGGAATACATAG...CTTGATCTGGGAAAGGGCAGCATTGTATTGGGAAAGTCCACTAGAAGCTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCTTCCGATCTCCTATTTaGTTCCTGAGCTTTTTGAGC +
Preference number: 5 (lower is better)
Translates to: RESASMQLRYSDHIFKSTFRSPI*FLSFLS
Trigger: GCTCAAAAAGCTCAGGAACAAAATAGGAGATCGGAA...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp TTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGAATTGCTACTACTGTGCATTTGCCCTTTGGTaGCATGTGTTGTTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: FTKMPIFSLPHLGNCYYCAFALW*HVLLLL
Trigger: CAACAGCAACAACACATGCAACCAAAGGGCAAATGC...ACAGTAGTAGCAATTCCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCATTCCCTAGGATGCATTaGCCCTTTGGTTGCATGTGT +
Preference number: 5 (lower is better)
Translates to: QACSLDTVTIYLSPPLISFPRMH*PFGCMC
Trigger: ACACATGCAACCAAAGGGCAAATGCATCCTAGGGAA...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS CCA 90 bp CTTTTGCAGGCTGTCAAGGTAATGTTGGAAGCGAGTGTATGTATATaGGTAGCAGTAAGCAAACTGGTAAATATCTTCTTCTCGGTCAAA +
Preference number: 5 (lower is better)
Translates to: LLQAVKVMLEASVCI*VAVSKLVNIFFSVK
Trigger: TTTGACCGAGAAGAAGATATTTACCAGTTTGCTTACTGCTACCCATATACATACACTCGCTTCCAACATTACCTTGACAGCCTGCAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS-3UTR CAA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCTATAAAACTCCAGGCTaGTTTTTGGGTCGTTGTACA +
Preference number: 5 (lower is better)
Translates to: RESASMQLRYSDHIFKSTYKTPG*FLGRCT
Trigger: TGTACAACGACCCAAAAACAAGCCTGGAGTTTTATA...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGTCATCCTCAAAGATGTaGCCATACATGAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGSSSKM*PYMKPF
Trigger: GAATGGCTTCATGTATGGCAACATCTTTGAGGATGA...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp TGGATACACTCCAATATATTTCCTTTAACCCTCCAGACCTCCAAAACTGAATCCGCTGTCAAGGTAATGTaGGAAGCGAGTGTATGTATA +
Preference number: 5 (lower is better)
Translates to: WIHSNIFPLTLQTSKTESAVKVM*EASVCI
Trigger: TATACATACACTCGCTTCCAACATTACCTTGACAGC...GGATTCAGTTTTGGAGGTCTGGAGGGTTAAAGGAAATATATTGGAGTGTATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS-3UTR CAA 90 bp AAAGGCACTTTACTCTTCACAAAAATGCCAATATTTAGCTTGCCACACCTTGGGTGGTTGCATGTGTTGTaGCTGTTGTTTTGGATCAGA +
Preference number: 5 (lower is better)
Translates to: KGTLLFTKMPIFSLPHLGWLHVL*LLFWIR
Trigger: TCTGATCCAAAACAACAGCAACAACACATGCAACCA...CCCAAGGTGTGGCAAGCTAAATATTGGCATTTTTGTGAAGAGTAAAGTGCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp AGGGAATCAGCAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGCCACACCTTGGGAATaGCTACTACTGTTTTATTTT +
Preference number: 5 (lower is better)
Translates to: RESASMQLRYSDHIFKSTATPWE*LLLFYF
Trigger: AAAATAAAACAGTAGTAGCAATTCCCAAGGTGTGGC...GGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTGCTGATTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp CAAGCATGCAGCTTAGATACAGTGACCATATATTTAAGTCCACCGTTGATTTCAGTCTTTAAAAAGGGGTaGAAGGGTCTTTGTGGTTCA +
Preference number: 5 (lower is better)
Translates to: QACSLDTVTIYLSPPLISVFKKG*KGLCGS
Trigger: TGAACCACAAAGACCCTTCAACCCCTTTTTAAAGAC...TGAAATCAACGGTGGACTTAAATATATGGTCACTGTATCTAAGCTGCATGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS-3UTR CAA 90 bp TCAAAAATTCTGTCCCATTGTTCCCTAGGATGCATTTGCCCTTTGGTTGCATGTCATGTGTTGTTGCTGTaGTTTTGGATCAGAAAATAC +
Preference number: 5 (lower is better)
Translates to: SKILSHCSLGCICPLVACHVLLL*FWIRKY
Trigger: GTATTTTCTGATCCAAAACAACAGCAACAACACATG...ACATGCAACCAAAGGGCAAATGCATCCTAGGGAACAATGGGACAGAATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS CCA 72 bp GGAGCTACCTCAGGAAGACGCGGCACGACGGTTGCCTaGGCAACGGGCGGCAGGCGCGCGGGTGGCCGGCGC +
Preference number: 6 (lower is better)
Translates to: GATSGRRGTTVA*ATGGRRAGGRR
Trigger: GCGCCGGCCACCCGCGCGCCTGCCGCCCGTTGCCCAGGCAACCGTCGTGCCGCGTCTTCCTGAGGTAGCTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS GCA 72 bp GACAGGAGCTACCTCAGGAAGACGCGGCACGACGGTTaGCTGGGCAACGGGCGGCAGGCGCGCGGGTGGCCG +
Preference number: 6 (lower is better)
Translates to: DRSYLRKTRHDG*LGNGRQARGWP
Trigger: CGGCCACCCGCGCGCCTGCCGCCCGTTGCCCAGGCAACCGTCGTGCCGCGTCTTCCTGAGGTAGCTCCTGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371839.6
CDS CCA 72 bp AGCTCACGCGAAGACCGCGGGGCAGTAGGGAGCGGGTaGTGGGATCAGTGGGCTGACAGGAGCTACCTCAGG +
Preference number: 6 (lower is better)
Translates to: SSREDRGAVGSG*WDQWADRSYLR
Trigger: CCTGAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCCGCTCCCTACTGCCCCGCGGTCTTCGCGTGAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS CCA 72 bp TCACGCGAAGACCGCGGGGCAGTAGGGAGCGGGTGGTaGGATCAGTGGGCTGACAGGAGCTACCTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: SREDRGAVGSGW*DQWADRSYLRK
Trigger: CTTCCTGAGGTAGCTCCTGTCAGCCCACTGATCCCACCACCCGCTCCCTACTGCCCCGCGGTCTTCGCGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS CAA 72 bp CCTCAGGCGCCGACTGGCTCCCCTCCGCCATTTTTGTaGTCCCTCAGTCTCCGAGCTCACGCGAAGACCGCG +
Preference number: 6 (lower is better)
Translates to: PQAPTGSPPPFL*SLSLRAHAKTA
Trigger: CGCGGTCTTCGCGTGAGCTCGGAGACTGAGGGACAACAAAAATGGCGGAGGGGAGCCAGTCGGCGCCTGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS CAA 72 bp CTGCCTCAGGCGCCGACTGGCTCCCCTCCGCCATTTTaGTTGTCCCTCAGTCTCCGAGCTCACGCGAAGACC +
Preference number: 6 (lower is better)
Translates to: LPQAPTGSPPPF*LSLSLRAHAKT
Trigger: GGTCTTCGCGTGAGCTCGGAGACTGAGGGACAACAAAAATGGCGGAGGGGAGCCAGTCGGCGCCTGAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS GCA 72 bp GTCCAGGAGTCCACCGAGGAAGCGACGGCCAGTTCCTaGTTTCACAGCGTCCCGGTTAAAGGATGTGCTGGA +
Preference number: 6 (lower is better)
Translates to: VQESTEEATASS*FHSVPVKGCAG
Trigger: TCCAGCACATCCTTTAACCGGGACGCTGTGAAAGCAGGAACTGGCCGTCGCTTCCTCGGTGGACTCCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS GCA 72 bp CCTGGGTGGACTCGTCCTGTGATGAATACCACCTTCTaGTCTGCCCCTTCCCGGAGATTGTCAGGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: PGWTRPVMNTTF*SAPSRRLSGLV
Trigger: AACCAGCCCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS GCA 72 bp GTGGACTCGTCCTGTGATGAATACCACCTTCTGCTCTaGCCCTTCCCGGAGATTGTCAGGGCTGGTTATCGT +
Preference number: 6 (lower is better)
Translates to: VDSSCDEYHLLL*PFPEIVRAGYR
Trigger: ACGATAACCAGCCCTGACAATCTCCGGGAAGGGGCAGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS CCA 72 bp TCATTTCCCATATCATTGCCTGCCTCAGGCGCCGACTaGCTCCCCTCCGCCATTTTTGTTGTCCCTCAGTCT +
Preference number: 6 (lower is better)
Translates to: SFPISLPASGAD*LPSAIFVVPQS
Trigger: AGACTGAGGGACAACAAAAATGGCGGAGGGGAGCCAGTCGGCGCCTGAGGCAGGCAATGATATGGGAAATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS TCA 72 bp AGGGTAGGATGGACCCATGGAGAGGGATCCAGCCAGTaGCGATTCAGATCAAATCCCATCAGAGAACACCTG +
Preference number: 6 (lower is better)
Translates to: RVGWTHGEGSSQ*RFRSNPIREHL
Trigger: CAGGTGTTCTCTGATGGGATTTGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS GCA 72 bp AAGACCAGGTATTCCCGGAGGACACAGGCAATAGGGTaGTGGCTTACAAGGAAGTCAATGATCCCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: KTRYSRRTQAIG*WLTRKSMIPWH
Trigger: GTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS GCA 72 bp TCGTTGTACATCTGGACGATGAGTTGTTTCACTCCATaGAGGGTAGGATGGACCCATGGAGAGGGATCCAGC +
Preference number: 6 (lower is better)
Translates to: SLYIWTMSCFTP*RVGWTHGEGSS
Trigger: GCTGGATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS GCA 72 bp GTCCCTGACCTTACCAAGTGGCAGGTACCGGAGACCTaGACCTTATATCTTAGTCCCATCCAGTCATCAAGC +
Preference number: 6 (lower is better)
Translates to: VPDLTKWQVPET*TLYLSPIQSSS
Trigger: GCTTGATGACTGGATGGGACTAAGATATAAGGTGCAGGTCTCCGGTACCTGCCACTTGGTAAGGTCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497451.1
CDS CCA 72 bp CCTTGGCACACAAATGATGAGGGTGTTTCCCCTGGGTaGACTCGTCCTGTGATGAATACCACCTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PWHTNDEGVSPG*TRPVMNTTFCS
Trigger: AGAGCAGAAGGTGGTATTCATCACAGGACGAGTCCACCCAGGGGAAACACCCTCATCATTTGTGTGCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS CCA 72 bp ACCAGGTATTCCCGGAGGACACAGGCAATAGGGTGCTaGCTTACAAGGAAGTCAATGATCCCTTGGCACACA +
Preference number: 6 (lower is better)
Translates to: TRYSRRTQAIGC*LTRKSMIPWHT
Trigger: TGTGTGCCAAGGGATCATTGACTTCCTTGTAAGCCAGCACCCTATTGCCTGTGTCCTCCGGGAATACCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS CAA 90 bp GGGCATTCAGTTACTTACTGGGTCGTTGTACATCTGGACGATGAGTaGTTTCACTCCATGCAGGGTAGGATGGACCCATGGAGAGGGATC +
Preference number: 6 (lower is better)
Translates to: GHSVTYWVVVHLDDE*FHSMQGRMDPWRGI
Trigger: GATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAGTAAGTAACTGAATGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS CCA 72 bp GAGTTGTTTCACTCCATGCAGGGTAGGATGGACCCATaGAGAGGGATCCAGCCAGTGACGATTCAGATCAAA +
Preference number: 6 (lower is better)
Translates to: ELFHSMQGRMDP*RGIQPVTIQIK
Trigger: TTTGATCTGAATCGTCACTGGCTGGATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334103.11
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS CCA 72 bp AATAGGAGAAGTCCTCAGCATTCTGGCAGAGGAGCTTaGGAAAAATGGCCTGCCTCTGGAACCGTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: NRRSPQHSGRGA*EKWPASGTVPH
Trigger: ATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCCCAAGCTCCTCTGCCAGAATGCTGAGGACTTCTCCTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CAA 72 bp GCCTGCCTCTGGAACCGTTCCTCATCCTCAAAGATGTaGCCATACATGAAGCCATTCATCATGGTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: ACLWNRSSSSKM*PYMKPFIMVEW
Trigger: CCACTCCACCATGATGAATGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CAA 90 bp AAACTCCAGGCTTGTTTTTGGGTCGTTGTACATCTGGACGATGAGTaGTTTCACTCCATGCAGGGTAGGATGGACCCATGGAGAGGGATC +
Preference number: 6 (lower is better)
Translates to: KLQACFWVVVHLDDE*FHSMQGRMDPWRGI
Trigger: GATCCCTCTCCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAAAAACAAGCCTGGAGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CAA 90 bp GGAAAAATGGCCTGCCTCTGGAACCGTTCCTCATCCTCAAAGATGTaGCCATACATGAAGCCATTCATCATGGTGGAGTGGGCATGGATG +
Preference number: 6 (lower is better)
Translates to: GKMACLWNRSSSSKM*PYMKPFIMVEWAWM
Trigger: CATCCATGCCCACTCCACCATGATGAATGGCTTCATGTATGGCAACATCTTTGAGGATGAGGAACGGTTCCAGAGGCAGGCCATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CCA 72 bp GGCCTAATGAACAGATCATACTCAAACTCAGAGACCTaGTCCACCCGGCCCAGGTTACCACTTTCAAAGCAA +
Preference number: 6 (lower is better)
Translates to: GLMNRSYSNSET*STRPRLPLSKQ
Trigger: TTGCTTTGAAAGTGGTAACCTGGGCCGGGTGGACCAGGTCTCTGAGTTTGAGTATGATCTGTTCATTAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
ENST00000497451.1
CDS CCA 72 bp TGCCCTTTCCCAGATCAAGCCATAGATCAGCAGCTGTaGAGGGCATTCAGTTACTTACTGGGTCGTTGTACA +
Preference number: 6 (lower is better)
Translates to: CPFPDQAIDQQL*RAFSYLLGRCT
Trigger: TGTACAACGACCCAGTAAGTAACTGAATGCCCTCCACAGCTGCTGATCTATGGCTTGATCTGGGAAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS CAA 72 bp GCTTGTTTTTGGGTCGTTGTACATCTGGACGATGAGTaGTTTCACTCCATGCAGGGTAGGATGGACCCATGG +
Preference number: 6 (lower is better)
Translates to: ACFWVVVHLDDE*FHSMQGRMDPW
Trigger: CCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAAAAACAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334103.11
ENST00000371839.6
ENST00000416121.5
CDS CAA 72 bp GTTACTTACTGGGTCGTTGTACATCTGGACGATGAGTaGTTTCACTCCATGCAGGGTAGGATGGACCCATGG +
Preference number: 6 (lower is better)
Translates to: VTYWVVVHLDDE*FHSMQGRMDPW
Trigger: CCATGGGTCCATCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAGTAAGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS CAA 72 bp GCAGCTGTGGAGGGCATTCAGTTACTTACTGGGTCGTaGTACATCTGGACGATGAGTTGTTTCACTCCATGC +
Preference number: 6 (lower is better)
Translates to: AAVEGIQLLTGS*YIWTMSCFTPC
Trigger: GCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAGTAAGTAACTGAATGCCCTCCACAGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS CAA 90 bp CATAGATCAGCAGCTGTGGAGGGCATTCAGTTACTTACTGGGTCGTaGTACATCTGGACGATGAGTTGTTTCACTCCATGCAGGGTAGGA +
Preference number: 6 (lower is better)
Translates to: HRSAAVEGIQLLTGS*YIWTMSCFTPCRVG
Trigger: TCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAGTAAGTAACTGAATGCCCTCCACAGCTGCTGATCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS CCA 72 bp TCTGGACTTCTATTTCTTTATTTCGCAGTCTCGGCATaGGAATTGCCACCTTTTCAACCACGGGGTTCAGCC +
Preference number: 6 (lower is better)
Translates to: SGLLFLYFAVSA*ELPPFQPRGSA
Trigger: GGCTGAACCCCGTGGTTGAAAAGGTGGCAATTCCCATGCCGAGACTGCGAAATAAAGAAATAGAAGTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334103.11
ENST00000371839.6
CDS CCA 72 bp GAGGGCATTCAGTTACTTACTGGGTCGTTGTACATCTaGACGATGAGTTGTTTCACTCCATGCAGGGTAGGA +
Preference number: 6 (lower is better)
Translates to: EGIQLLTGSLYI*TMSCFTPCRVG
Trigger: TCCTACCCTGCATGGAGTGAAACAACTCATCGTCCAGATGTACAACGACCCAGTAAGTAACTGAATGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371838.5
CDS CAA 90 bp ACTCTGGCCCAGCTGCTCCCGAAAGAAGTAATCCATGTTTCTCTTTaGCAGGCTGTCAAGGTAATGTTGGAAGCGAGTGTATGTATATGG +
Preference number: 6 (lower is better)
Translates to: TLAQLLPKEVIHVSL*QAVKVMLEASVCIW
Trigger: CCATATACATACACTCGCTTCCAACATTACCTTGACAGCCTGCAAAAGAGAAACATGGATTACTTCTTTCGGGAGCAGCTGGGCCAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS TCA 72 bp CAGAAATTGGTATTTAGAATAAGGCTTATAACACCCTaGCCTCAGGGCTTAGTGCTTGGGAGCAGGCCCAAC +
Preference number: 6 (lower is better)
Translates to: QKLVFRIRLITP*PQGLVLGSRPN
Trigger: GTTGGGCCTGCTCCCAAGCACTAAGCCCTGAGGTCAGGGTGTTATAAGCCTTATTCTAAATACCAATTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497451.1
CDS GCA 72 bp AGATGCTGGGTCATAAGCCTCAATGTACCATTTACCTaGAGACTTTCTTCCATTGCTATCACAGGGGCCTAC +
Preference number: 6 (lower is better)
Translates to: RCWVISLNVPFT*RLSSIAITGAY
Trigger: GTAGGCCCCTGTGATAGCAATGGAAGAAAGTCTGCAGGTAAATGGTACATTGAGGCTTATGACCCAGCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497451.1
CDS CAA 72 bp CTTCTATTTCTTTATTTCGCAGTCTCGGCATGGGAATaGCCACCTTTTCAACCACGGGGTTCAGCCGATAAT +
Preference number: 6 (lower is better)
Translates to: LLFLYFAVSAWE*PPFQPRGSADN
Trigger: ATTATCGGCTGAACCCCGTGGTTGAAAAGGTGGCAATTCCCATGCCGAGACTGCGAAATAAAGAAATAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334103.11
ENST00000371839.6
CDS CAA 72 bp CAGCTGCTCCCGAAAGAAGTAATCCATGTTTCTCTTTaGCAGGCTGTCAAGGTAATGTTGGAAGCGAGTGTA +
Preference number: 6 (lower is better)
Translates to: QLLPKEVIHVSL*QAVKVMLEASV
Trigger: TACACTCGCTTCCAACATTACCTTGACAGCCTGCAAAAGAGAAACATGGATTACTTCTTTCGGGAGCAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS CAA 72 bp GCCTCAATGTACCATTTACCTGCAGACTTTCTTCCATaGCTATCACAGGGGCCTACTTCTTTACATCCAGGA +
Preference number: 6 (lower is better)
Translates to: ASMYHLPADFLP*LSQGPTSLHPG
Trigger: TCCTGGATGTAAAGAAGTAGGCCCCTGTGATAGCAATGGAAGAAAGTCTGCAGGTAAATGGTACATTGAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497451.1
CDS GCA 72 bp TTCTATTTCTTTATTTCGCAGTCTCGGCATGGGAATTaGCACCTTTTCAACCACGGGGTTCAGCCGATAATA +
Preference number: 6 (lower is better)
Translates to: FYFFISQSRHGN*HLFNHGVQPII
Trigger: TATTATCGGCTGAACCCCGTGGTTGAAAAGGTGGCAATTCCCATGCCGAGACTGCGAAATAAAGAAATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334103.11
ENST00000371839.6
CDS GCA 72 bp CCTCAATGTACCATTTACCTGCAGACTTTCTTCCATTaGTATCACAGGGGCCTACTTCTTTACATCCAGGAT +
Preference number: 6 (lower is better)
Translates to: PQCTIYLQTFFH*YHRGLLLYIQD
Trigger: ATCCTGGATGTAAAGAAGTAGGCCCCTGTGATAGCAATGGAAGAAAGTCTGCAGGTAAATGGTACATTGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497451.1
CDS CAA 90 bp TTGAAAATGACCCTCTGTGATTCTTTCACATTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGTGGATTACAGGTGTCCGGCCTAATG +
Preference number: 6 (lower is better)
Translates to: LKMTLCDSFTFSTVK*NQTRKRGLQVSGLM
Trigger: CATTAGGCCGGACACCTGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAATGTGAAAGAATCACAGAGGGTCATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS CCA 72 bp TTGGAAGCACTATATATTTGCTCACATTCCCTCCAATaGCATCATCATTTCCCATATCATTGCCTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: LEALYICSHSLQ*HHHFPYHCLPQ
Trigger: CTGAGGCAGGCAATGATATGGGAAATGATGATGCCATTGGAGGGAATGTGAGCAAATATATAGTGCTTCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
CDS CCA 72 bp AAGATGTCCTTTCTTGGGCTGTCCACAATAGCCAGTTaGAAGCACTATATATTTGCTCACATTCCCTCCAAT +
Preference number: 6 (lower is better)
Translates to: KMSFLGLSTIAS*KHYIFAHIPSN
Trigger: ATTGGAGGGAATGTGAGCAAATATATAGTGCTTCCAACTGGCTATTGTGGACAGCCCAAGAAAGGACATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
ENST00000497451.1
CDS CAA 72 bp ATCCATGTTTCTCTTTTGCAGGCTGTCAAGGTAATGTaGGAAGCGAGTGTATGTATATGGGTAGCAGTAAGC +
Preference number: 6 (lower is better)
Translates to: IHVSLLQAVKVM*EASVCIWVAVS
Trigger: GCTTACTGCTACCCATATACATACACTCGCTTCCAACATTACCTTGACAGCCTGCAAAAGAGAAACATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000371836.1
ENST00000371838.5
ENST00000371839.6
ENST00000416121.5
CDS CAA 90 bp ATCAATAAGATTTCCTGTGATTCTTTCACATTTTCAACAGTAAAGTaGAACCAGACTCGGAAGCGTGGATTACAGGTGTCCGGCCTAATG +
Preference number: 6 (lower is better)
Translates to: INKISCDSFTFSTVK*NQTRKRGLQVSGLM
Trigger: CATTAGGCCGGACACCTGTAATCCACGCTTCCGAGTCTGGTTCAACTTTACTGTTGAAAATGTGAAAGAATCACAGGAAATCTTATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497451.1