RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGBL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165923

Ensembl transcript IDs: ENST00000357610.7, ENST00000525123.6, ENST00000526331.5, ENST00000528244.5, ENST00000528609.5, ENST00000528632.5, ENST00000529154.5, ENST00000529712.5, ENST00000530577.5, ENST00000530969.1, ENST00000531835.1, ENST00000532595.5, ENST00000532835.1, ENST00000642469.1, ENST00000642912.1, ENST00000643830.1, ENST00000643952.1, ENST00000644455.1, ENST00000644932.1, ENST00000645178.1, ENST00000645431.2, ENST00000645554.1, ENST00000645934.1, ENST00000646211.1, ENST00000646890.1, ENST00000647499.1

Found 732 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCACAGCCCAGGCTCACCTACGGGTATGTGTATATGTGCAAGGATaGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCAGGATA +
Preference number: 1 (lower is better)
Translates to: GTAQAHLRVCVYVQG*VCRHGSTASLCGRI
Trigger: TATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATACCCGTAGGTGAGCCTGGGCTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR GCA 90 bp GCCCAGGCTCACCTACGGGTATGTGTATATGTGCAAGGATGGGTATaGCGCCATGGCAGCACAGCCTCTCTTTGTGGCAGGATATCTGCT +
Preference number: 1 (lower is better)
Translates to: AQAHLRVCVYVQGWV*RHGSTASLCGRISA
Trigger: AGCAGATATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATACCCGTAGGTGAGCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR CCA 90 bp CTTTGTGGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTaGAGCTGGCTCTTGGCTGGAGTTTATGGTTCTCTTTGGAGAGCA +
Preference number: 1 (lower is better)
Translates to: LCGRISAPRPVWLHT*SWLLAGVYGSLWRA
Trigger: TGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCCACAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR CCA 90 bp TATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTaGCTGGAGTTTATGGTTCTCTTTGGAGAGCATGATACTGTAAAG +
Preference number: 1 (lower is better)
Translates to: YLLLGQFGFIPGAGS*LEFMVLFGEHDTVK
Trigger: CTTTACAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR TCA 90 bp TGGAGCTGGCTCTTGGCTGGAGTTTATGGTTCTCTTTGGAGAGCATaGTACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTATT +
Preference number: 1 (lower is better)
Translates to: WSWLLAGVYGSLWRA*YCKAWLLILHSPFI
Trigger: AATAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR CCA 90 bp ATGTCACTCCAACTTCCTTCTAAATCTACATCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCCTGTCGTAAAAGCTCCTTAAGCTCT +
Preference number: 1 (lower is better)
Translates to: MSLQLPSKSTSCPSS*NFLWISCRKSSLSS
Trigger: AGAGCTTAAGGAGCTTTTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAGATGTAGATTTAGAAGGAAGTTGGAGTGACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR TCA 90 bp GCCTGTTCTTATGTTCTTGGTGTAAAATCACAAATCACCAATATTTaGTTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGT +
Preference number: 1 (lower is better)
Translates to: ACSYVLGVKSQITNI*FQTSVMSNPKQCQC
Trigger: ACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGATTTGTGATTTTACACCAAGAACATAAGAACAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
3UTR-3UTR TCA 90 bp CAGGCTCACCTACGGGTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCTCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 2 (lower is better)
Translates to: QAHLRVCVYVQGWVCRHGSQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...GCCATGGCGGCATACCCATCCTTGCACATATACACATACCCGTAGGTGAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CCA 90 bp CAGGCTCACCTACGGGTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCGTTTGGCTTCATACCTaGAGCTGGCTCTTGGCTGGA +
Preference number: 2 (lower is better)
Translates to: QAHLRVCVYVQGWVCRHGVWLHT*SWLLAG
Trigger: TCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAAC...GCCATGGCGGCATACCCATCCTTGCACATATACACATACCCGTAGGTGAGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGGGGAATACCTCATTGTaGGCAAACCTGACATACAGC +
Preference number: 2 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLGNTSL*ANLTYS
Trigger: GCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCC...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp TATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: YVYMCKDGYAAMAAQPLFKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...AAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp AATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACCTACGTGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 2 (lower is better)
Translates to: NLKTPDEVLVWHSPGSPTCCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...CGTAGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp TTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAACATGCTGCCTGGTGTAGTGGAGTaGGAAAGGACTTGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: FPKRAIQQALRVILPNMLPGVVE*ERTWQA
Trigger: TGCCTGCCAAGTCCTTTCTCACTCCACTACACCAGG...CAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR TCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGTCTCTTTGGAGAGCATaGTACTGTAAAGCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLSLWRA*YCKAWL
Trigger: AAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGA...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 2 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp CATCTGAGAGAGAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGTCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 2 (lower is better)
Translates to: HLRENCQSHWCWIQCQTKSQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCCATTGTGAGCAAACCTaGCATACAGCAGTAGGACTG +
Preference number: 2 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGHCEQT*HTAVGL
Trigger: CAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATG...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGGGAATACCTCATTGTaGGCAAACCTGACATACAGC +
Preference number: 2 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGGNTSL*ANLTYS
Trigger: GCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp TATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: YVYMCKDGYAAMAAQPLFNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...AAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp GTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 2 (lower is better)
Translates to: VCVYVQGWVCRHGSTASLCCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...AAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 2 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGCCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp GTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTGAGGTATATCTGTGCTaGCATGAAGTGTGCCATGAG +
Preference number: 2 (lower is better)
Translates to: VCVYVQGWVCRHGSTASLEVYLC*HEVCHE
Trigger: CTCATGGCACACTTCATGGCAGCACAGATATACCTC...AAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCAACTGTCAGAGCCACTaGTGCTGGATTCAATGTCAG +
Preference number: 2 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGNCQSH*CWIQCQ
Trigger: CTGACATTGAATCCAGCACCAGTGGCTCTGACAGTT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTGTAAGGTCAGTGCATaGGTGCACAACACAGTATAC +
Preference number: 2 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGCKVSA*VHNTVY
Trigger: GTATACTGTGTTGTGCACTCATGCACTGACCTTACA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp GTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTAAGGTCAGTGCATaGGTGCACAACACAGTATAC +
Preference number: 2 (lower is better)
Translates to: VCVYVQGWVCRHGSTASLCKVSA*VHNTVY
Trigger: GTATACTGTGTTGTGCACTCATGCACTGACCTTACA...AAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp TATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 2 (lower is better)
Translates to: YVYMCKDGYAAMAAQPLFMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...AAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp GGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCCCTGGTGTAGTGGAGTaGGAAAGGACTTGGCAGGCA +
Preference number: 2 (lower is better)
Translates to: GHRSFSFCRVSGIKSSFSPGVVE*ERTWQA
Trigger: TGCCTGCCAAGTCCTTTCTCACTCCACTACACCAGG...GGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR TCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGAACATCTTCTTTTTCTaGGTCAGCTCATCTGCTATG +
Preference number: 2 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLNIFFF*VSSSAM
Trigger: CATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTT...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 2 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFSQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp TTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAACATGCTGCAGGCAGAAAGATTCTaGAGCTACAAGGGCTGTGTT +
Preference number: 2 (lower is better)
Translates to: FPKRAIQQALRVILPNMLQAERF*SYKGCV
Trigger: AACACAGCCCTTGTAGCTTCAGAATCTTTCTGCCTG...CAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR TCA 90 bp CCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAACATGCTGATCTGAGGAAATGGATGTaGAGAGGAGACTTGAGAAGC +
Preference number: 2 (lower is better)
Translates to: PQESHSTGIEGYSSEHADLRKWM*RGDLRS
Trigger: GCTTCTCAAGTCTCCTCTTCACATCCATTTCCTCAG...ATCAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 2 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTGCATCTTGACCACATaGCCACAGTGTAAGTACAAA +
Preference number: 2 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGCILTT*PQCKYK
Trigger: TTTGTACTTACACTGTGGGCATGTGGTCAAGATGCA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp GTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 2 (lower is better)
Translates to: VCVYVQGWVCRHGSTASLKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...AAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 2 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSSQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 2 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHSQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp GAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGAGATGTCACTCTGTAAGGTCAGTGCATaGGTGCACAACACAGTATAC +
Preference number: 2 (lower is better)
Translates to: ELSEPLVLDSMSDKEMSLCKVSA*VHNTVY
Trigger: GTATACTGTGTTGTGCACTCATGCACTGACCTTACA...GAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp CTGATAGGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTGTGAAGAGGAGACTTaGGAAGCAGCCTGGTGTAGT +
Preference number: 2 (lower is better)
Translates to: LIGHRSFSFCRVSGIKSSCEEET*EAAWCS
Trigger: ACTACACCAGGCTGCTTCTCAAGTCTCCTCTTCACA...AGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCCTATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR TCA 90 bp GCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCCTGTGAAGAGGAGACTTaGGAAGCAGCCTGGTGTAGT +
Preference number: 2 (lower is better)
Translates to: AIEASPFAGCLVSNHLFPCEEET*EAAWCS
Trigger: ACTACACCAGGCTGCTTCTCAAGTCTCCTCTTCACA...GGGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR CCA 90 bp TATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCATCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCC +
Preference number: 2 (lower is better)
Translates to: YMCKDGYAAMAAQPLFVASCPSS*NFLWIS
Trigger: GGAAATCCACAAGAAATTCCATGAACTTGGACAAGA...TGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 2 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp GGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCTTCTTCCGAACATGCTaGTGCGTAGCAGAGTTTGGT +
Preference number: 2 (lower is better)
Translates to: GHRSFSFCRVSGIKSSFSFFRTC*CVAEFG
Trigger: ACCAAACTCTGCTACGCATCAGCATGTTCGGAAGAA...GGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 2 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTATACCACAAGTAAATaGAGTTCCCAGTCATACATC +
Preference number: 2 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGYTTSK*SSQSYI
Trigger: GATGTATGACTGGGAACTGCATTTACTTGTGGTATA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 2 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR CAA 90 bp TGGTATCAAATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAACATGCTGATGCGTAGCAGAGTTTGG +
Preference number: 2 (lower is better)
Translates to: WYQIIFFPKRAIQQA*RVILPNMLMRSRVW
Trigger: CCAAACTCTGCTACGCATCAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGATTTGATACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 2 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCATTGTGAGCAAACCTaGCATACAGCAGTAGGACTG +
Preference number: 2 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSHCEQT*HTAVGL
Trigger: CAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACATTGTGAGCAAACCTaGCATACAGCAGTAGGACTG +
Preference number: 2 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLHCEQT*HTAVGL
Trigger: CAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp CTGATAGGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTCCATTCAACAGGCATTaGGGGTTATTCTTCCGAACA +
Preference number: 2 (lower is better)
Translates to: LIGHRSFSFCRVSGIKSSPFNRH*GLFFRT
Trigger: TGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGG...AGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCCTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 2 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 2 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSCCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGAGGTATATCTGTGCTaGCATGAAGTGTGCCATGAG +
Preference number: 2 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLEVYLC*HEVCHE
Trigger: CTCATGGCACACTTCATGGCAGCACAGATATACCTC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp ATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGCAGAGTTTGGTAAACTaGCTCTCTGAGCTTACAGCT +
Preference number: 2 (lower is better)
Translates to: IIFFPKRAIQQALRVILPQSLVN*LSELTA
Trigger: AGCTGTAAGCTCAGAGAGGCAGTTTACCAAACTCTG...CGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCAGAGCCACTGGTGCTaGATTCAATGTCAGACAAAG +
Preference number: 2 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSQSHWC*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAACTGTCAGAGCCACTaGTGCTGGATTCAATGTCAG +
Preference number: 2 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSNCQSH*CWIQCQ
Trigger: CTGACATTGAATCCAGCACCAGTGGCTCTGACAGTT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACTTCATACCTGGAGCTaGCTCTTGGCTGGAGTTTAT +
Preference number: 2 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLLHTWS*LLAGVY
Trigger: ATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp TTTGGAGAGCATGATACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTAATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 2 (lower is better)
Translates to: FGEHDTVKPGFLFCILPLMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...TAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 2 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp TTTGGAGAGCATGATACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTAAGCTCTGCTAGACACTaGGTGAACTTCATTTGGTCA +
Preference number: 2 (lower is better)
Translates to: FGEHDTVKPGFLFCILPLSSARH*VNFIWS
Trigger: TGACCAAATGAAGTTCACTCAGTGTCTAGCAGAGCT...TAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTGCATCTTGACCACATaGCCACAGTGTAAGTACAAA +
Preference number: 2 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHCILTT*PQCKYK
Trigger: TTTGTACTTACACTGTGGGCATGTGGTCAAGATGCA...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 2 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQCCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTGTAAGGTCAGTGCATaGGTGCACAACACAGTATAC +
Preference number: 2 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQCKVSA*VHNTVY
Trigger: GTATACTGTGTTGTGCACTCATGCACTGACCTTACA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 2 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAATCTATTGGTTAAAATaGGGTATATCTGTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLIYWLK*GISVLP
Trigger: TGGCAGCACAGATATACCTCATTTTAACCAATAGAT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTGCATCTTGACCACATaGCCACAGTGTAAGTACAAA +
Preference number: 2 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQCILTT*PQCKYK
Trigger: TTTGTACTTACACTGTGGGCATGTGGTCAAGATGCA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGAATGAGGTATATCTGTaGTGCCATGAAGTGTGCCAT +
Preference number: 2 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQNEVYL*CHEVCH
Trigger: ATGGCACACTTCATGGCAGCACAGATATACCTCATT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCCTGGCTTCTTATTCTaGATTCTCCCTTTATTCTTA +
Preference number: 2 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSPGFLF*ILPLFL
Trigger: TAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGATCTATTGGTTAAAATaGGGTATATCTGTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQIYWLK*GISVLP
Trigger: TGGCAGCACAGATATACCTCATTTTAACCAATAGAT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTATACCACAAGTAAATaGAGTTCCCAGTCATACATC +
Preference number: 2 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQYTTSK*SSQSYI
Trigger: GATGTATGACTGGGAACTGCATTTACTTGTGGTATA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp TATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCACCCCCGATGAAGTGCTaGTGTGGCACAGCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: YMCKDGYAAMAAQPLFVAPPMKC*CGTAQA
Trigger: AGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGG...TGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR GCA 72 bp GCACAGCCCAGGCTCACCTACGGGTATGTGTATATGTaGAAGGATGGGTATGCCGCCATGGCAGCACAGCCT +
Preference number: 3 (lower is better)
Translates to: AQPRLTYGYVYM*KDGYAAMAAQP
Trigger: AGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATACCCGTAGGTGAGCCTGGGCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCCCCCCGATGAAGTGCTaGTGTGGCACAGCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGPPMKC*CGTAQA
Trigger: AGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGG...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp AATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACCTACGACCTGGAGCTGGCTCTaGGCTGGAGTTTATGGTTCT +
Preference number: 3 (lower is better)
Translates to: NLKTPDEVLVWHSPGSPTTWSWL*AGVYGS
Trigger: AGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGT...CGTAGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCCCCCGATGAAGTGCTaGTGTGGCACAGCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFPPMKC*CGTAQA
Trigger: AGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 3 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp TATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTACCTGGAGCTGGCTCTaGGCTGGAGTTTATGGTTCT +
Preference number: 3 (lower is better)
Translates to: YVYMCKDGYAAMAAQPLFTWSWL*AGVYGS
Trigger: AGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGT...AAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR CCA 72 bp TCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTaGCTCTTGGCTGGAGTTTATGGTTCTCTTTGGAGA +
Preference number: 3 (lower is better)
Translates to: SAPRPVWLHTWS*LLAGVYGSLWR
Trigger: TCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp TTTGGAGAGCATGATACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTACCCCCGATGAAGTGCTaGTGTGGCACAGCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: FGEHDTVKPGFLFCILPLPPMKC*CGTAQA
Trigger: AGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGG...TAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp GTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: VCVYVQGWVCRHGSTASLAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...AAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR CCA 72 bp GCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGGCTaGAGTTTATGGTTCTCTTTGGAGAGCATGATACTG +
Preference number: 3 (lower is better)
Translates to: ASLASYLELALG*SLWFSLESMIL
Trigger: CAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR CCA 72 bp AGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTaGAGCTGGCTCTTGGCTGGAGTTTATGGTTCTCTT +
Preference number: 3 (lower is better)
Translates to: RISAPRPVWLHT*SWLLAGVYGSL
Trigger: AAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGCCCCCGATGAAGTGCTaGTGTGGCACAGCCCAGGCT +
Preference number: 3 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQPPMKC*CGTAQA
Trigger: AGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGG...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp TATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCACTGAGTGAACTTCATTaGGTCAGGATCACAAAAGTC +
Preference number: 3 (lower is better)
Translates to: YMCKDGYAAMAAQPLFVALSELH*VRITKV
Trigger: GACTTTTGTGATCCTGACCAAATGAAGTTCACTCAG...TGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp GTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 3 (lower is better)
Translates to: VCVYVQGWVCRHGSTASLKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...AAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCATGAGGTATGCATCTaGACCACATGCCCACAGTGT +
Preference number: 3 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLHEVCI*TTCPQC
Trigger: ACACTGTGGGCATGTGGTCAAGATGCATACCTCATG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCATGAGGTATGCATCTaGACCACATGCCCACAGTGT +
Preference number: 3 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFHEVCI*TTCPQC
Trigger: ACACTGTGGGCATGTGGTCAAGATGCATACCTCATG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACATGAGGTATGCATCTaGACCACATGCCCACAGTGT +
Preference number: 3 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLHEVCI*TTCPQC
Trigger: ACACTGTGGGCATGTGGTCAAGATGCATACCTCATG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCATGAGGTATGCATCTaGACCACATGCCCACAGTGT +
Preference number: 3 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHHEVCI*TTCPQC
Trigger: ACACTGTGGGCATGTGGTCAAGATGCATACCTCATG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp ATGGCTTCTATCTGTCTGTGCACAGCTGAAGATAAACTGATAGGCCATAGAAGCGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 3 (lower is better)
Translates to: MASICLCTAEDKLIGHRSAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...GCTTCTATGGCCTATCAGTTTATCTTCAGCTGTGCACAGACAGATAGAAGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR TCA 72 bp TATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTaGCATACAGCAGTAGGACTGACCGTCACTAGAAAG +
Preference number: 3 (lower is better)
Translates to: YFYVGIPHCEQT*HTAVGLTVTRK
Trigger: CTTTCTAGTGACGGTCAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR TCA 72 bp CATGCATTGTTATTTCTATGTGGGAATACCTCATTGTaGGCAAACCTGACATACAGCAGTAGGACTGACCGT +
Preference number: 3 (lower is better)
Translates to: HALLFLCGNTSL*ANLTYSSRTDR
Trigger: ACGGTCAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAATGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR TCA 72 bp CTCTTGGCTGGAGTTTATGGTTCTCTTTGGAGAGCATaGTACTGTAAAGCCTGGCTTCTTATTCTGCATTCT +
Preference number: 3 (lower is better)
Translates to: LLAGVYGSLWRA*YCKAWLLILHS
Trigger: AGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR GCA 72 bp GTGCATGAGTGCACAACACAGTATACCACAAGTAAATaGAGTTCCCAGTCATACATCTCCCCCATTATAAAA +
Preference number: 3 (lower is better)
Translates to: VHECTTQYTTSK*SSQSYISPIIK
Trigger: TTTTATAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
3UTR-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAGTTCATGGAATTTCTaGTGGATTTCCTGTCGTAAA +
Preference number: 3 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLSSWNF*WISCRK
Trigger: TTTACGACAGGAAATCCACAAGAAATTCCATGAACT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR-3UTR CAA 90 bp TTTGGAGAGCATGATACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTAAGTTCATGGAATTTCTaGTGGATTTCCTGTCGTAAA +
Preference number: 3 (lower is better)
Translates to: FGEHDTVKPGFLFCILPLSSWNF*WISCRK
Trigger: TTTACGACAGGAAATCCACAAGAAATTCCATGAACT...TAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR TCA 72 bp TATGTTCTTGGTGTAAAATCACAAATCACCAATATTTaGTTCCAGACTTCAGTCATGTCTAATCCAAAGCAG +
Preference number: 3 (lower is better)
Translates to: YVLGVKSQITNI*FQTSVMSNPKQ
Trigger: CTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGATTTGTGATTTTACACCAAGAACATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAGAGGTTGCAGTGAGCTaGGGCCGCGCCACTGCATCC +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSEVAVS*GRATAS
Trigger: GGATGCAGTGGCGCGGCCTCAGCTCACTGCAACCTC...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACCCAAGCAGCACGGATaGCTGCGGCAGAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSPKQHG*LRQRSS
Trigger: GGAGCTTCTCTGCCGCAGCCATCCGTGCTGCTTGGG...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGGGCAGAGCGATGGATaGGACCGCCTTCGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLGQSDG*DRLRAP
Trigger: CGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCC...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR CCA 90 bp AATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACCTACGGCTCCTAGGCCAGTTTaGCTTCATACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NLKTPDEVLVWHSPGSPTAPRPV*LHTWSW
Trigger: CCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGC...CGTAGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAAGGTGGAGGTTGCAGTaGGCTGAGGCCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPRWRLQ*AEAAPL
Trigger: CAGTGGCGCGGCCTCAGCTCACTGCAACCTCCACCT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGGGGACAAACTCGCTaGACCCGCCCGCCACCGCCT +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFRGQTR*TRPPPP
Trigger: AGGCGGTGGCGGGCGGGTGCAGCGAGTTTGTCCCCT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR GCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGGGCAGAGCGATGGATaGGACCGCCTTCGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLGQSDG*DRLRAP
Trigger: CGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR CCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGGTTTGGCTTCATACCTaGAGCTGGCTCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLVWLHT*SWLLAG
Trigger: TCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAAC...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAGCTCCTAGGCCAGTTTaGCTTCATACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSAPRPV*LHTWSW
Trigger: CCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGC...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAATGGGTATGCCGCCATaGCAGCACAGCCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSMGMPP*QHSLSL
Trigger: CAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCAT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCAATGGGTATGCCGCCATaGCAGCACAGCCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: YMCKDGYAAMAAQPLFVAMGMPP*QHSLSL
Trigger: CAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCAT...TGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAGGAGGGCAGAGCGATaGATGCGACCGCCTTCGCGC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSRRAER*MRPPSR
Trigger: GCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGGTGGAGGTTGCAGTaGGCTGAGGCCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFRWRLQ*AEAAPL
Trigger: CAGTGGCGCGGCCTCAGCTCACTGCAACCTCCACCT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACCTACGAGACAAAAATATCTCTaGGGAGCTGGGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: NLKTPDEVLVWHSPGSPTRQKYL*GAGHLG
Trigger: CCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCT...CGTAGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp AATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACCTACGAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: NLKTPDEVLVWHSPGSPTNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...CGTAGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp CTGATAGGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTGCTGGGAGGGTTGCTTaGGCCTGGGATGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: LIGHRSFSFCRVSGIKSSAGRVA*AWDVEA
Trigger: GGCCTCCACATCCCAGGCTCAAGCAACCCTCCCAGC...AGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCCTATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp GGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCGCTGGGAGGGTTGCTTaGGCCTGGGATGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GHRSFSFCRVSGIKSSFSAGRVA*AWDVEA
Trigger: GGCCTCCACATCCCAGGCTCAAGCAACCCTCCCAGC...GGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAGGGGACAAACTCGCTaGACCCGCCCGCCACCGCCT +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHRGQTR*TRPPPP
Trigger: AGGCGGTGGCGGGCGGGTGCAGCGAGTTTGTCCCCT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR GCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAGCAGCACGGATGGCTaGGGCAGAGAAGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSSSTDG*GREAPA
Trigger: CGCTGGAGCTTCTCTGCCGCAGCCATCCGTGCTGCT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCCAGCCCAGGCAAGAGTaGAAGTCTCTGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGQPRQE*KSLLMA
Trigger: AGCCATCAACAGAGACTTTCACTCTTGCCTGGGCTG...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTGAGGTTGCAGTGAGCTaGGGCCGCGCCACTGCATCC +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIEVAVS*GRATAS
Trigger: GGATGCAGTGGCGCGGCCTCAGCTCACTGCAACCTC...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGAGGTTGCAGTGAGCTaGGGCCGCGCCACTGCATCC +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSEVAVS*GRATAS
Trigger: GGATGCAGTGGCGCGGCCTCAGCTCACTGCAACCTC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAGGTGGAGGTTGCAGTaGGCTGAGGCCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHRWRLQ*AEAAPL
Trigger: CAGTGGCGCGGCCTCAGCTCACTGCAACCTCCACCT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGGTGGAGGTTGCAGTaGGCTGAGGCCGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIRWRLQ*AEAAPL
Trigger: CAGTGGCGCGGCCTCAGCTCACTGCAACCTCCACCT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCATTACTTTCTCCAGGGTaGACTCTGGCACTCAAGACC +
Preference number: 4 (lower is better)
Translates to: YMCKDGYAAMAAQPLFVALLSPG*TLALKT
Trigger: GGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAA...TGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATTACTTTCTCCAGGGTaGACTCTGGCACTCAAGACC +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSLLSPG*TLALKT
Trigger: GGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCGGGCAGAGCGATGGATaGGACCGCCTTCGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSGQSDG*DRLRAP
Trigger: CGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCC...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGTGTCAGAGCCACTGGTaGTGGATTCAATGTCAGACA +
Preference number: 4 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLCQSHW*WIQCQT
Trigger: TGTCTGACATTGAATCCAGCACCAGTGGCTCTGACA...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp CAGGCTCACCTACGGGTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCTGTCAGAGCCACTGGTaGTGGATTCAATGTCAGACA +
Preference number: 4 (lower is better)
Translates to: QAHLRVCVYVQGWVCRHGCQSHW*WIQCQT
Trigger: TGTCTGACATTGAATCCAGCACCAGTGGCTCTGACA...GCCATGGCGGCATACCCATCCTTGCACATATACACATACCCGTAGGTGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAATGGAAAAGAGCTCTTaGGGTTCTCGAAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSMEKSS*GSRRRG
Trigger: CCCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCAT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGCTTCATACCTGGAGCTaGCTCTTGGCTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLLHTWS*LLAGVY
Trigger: ATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAG...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGTTTGGCTTCATACCTaGAGCTGGCTCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGVWLHT*SWLLAG
Trigger: TCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAAC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGCTCCTAGGCCAGTTTaGCTTCATACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YVYMCKDGYAAMAAQPLFAPRPV*LHTWSW
Trigger: CCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGC...AAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCCCAAGCAGCACGGATaGCTGCGGCAGAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFPKQHG*LRQRSS
Trigger: GGAGCTTCTCTGCCGCAGCCATCCGTGCTGCTTGGG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAGGAGGGCAGAGCGATaGATGCGACCGCCTTCGCGC +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSRRAER*MRPPSR
Trigger: GCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR CCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGCAGAGCCACTGGTGCTaGATTCAATGTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLQSHWC*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTG...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCCTTGAGCCTGGGATGTaGAGGCCACTGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GHRSFSFCRVSGIKSSFSLEPGM*RPLPSS
Trigger: GCTGGAGGGCAGTGGCCTCCACATCCCAGGCTCAAG...GGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CCA 90 bp GCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCCCTTGAGCCTGGGATGTaGAGGCCACTGCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AIEASPFAGCLVSNHLFPLEPGM*RPLPSS
Trigger: GCTGGAGGGCAGTGGCCTCCACATCCCAGGCTCAAG...GGGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATGGTCATATGGAAACTaGATGGTCCACGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSWSYGN*MVHVRQ
Trigger: CTGTCTCACGTGGACCATTCAGTTTCCATATGACCA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTTACTTTCTCCAGGGTaGACTCTGGCACTCAAGACC +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGLLSPG*TLALKT
Trigger: GGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCAGCTATGTTTGCTAGGTaGACAGGAAGACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: YMCKDGYAAMAAQPLFVAAMFAR*TGRPSE
Trigger: CTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGC...TGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGTGTAAGGTCAGTGCATaGGTGCACAACACAGTATAC +
Preference number: 4 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLCKVSA*VHNTVY
Trigger: GTATACTGTGTTGTGCACTCATGCACTGACCTTACA...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp CAGGCTCACCTACGGGTATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCTGTAAGGTCAGTGCATaGGTGCACAACACAGTATAC +
Preference number: 4 (lower is better)
Translates to: QAHLRVCVYVQGWVCRHGCKVSA*VHNTVY
Trigger: GTATACTGTGTTGTGCACTCATGCACTGACCTTACA...GCCATGGCGGCATACCCATCCTTGCACATATACACATACCCGTAGGTGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACATTGTGAGCAAACCTaGCATACAGCAGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSHCEQT*HTAVGL
Trigger: CAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATG...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATCCTCCAGCCAATATTaGGGGTGTTGGCATCCAATT +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSSSSQY*GCWHPI
Trigger: AATTGGATGCCAACACCCGCAATATTGGCTGGAGGA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGGGTATGTGTATATGTaGAAGGATGGGTATGCCGCC +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGGYVYM*KDGYAA
Trigger: GGCGGCATACCCATCCTTGCACATATACACATACCC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAGAGGTATATCTGTGCTaGCATGAAGTGTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSEVYLC*HEVCHE
Trigger: CTCATGGCACACTTCATGGCAGCACAGATATACCTC...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAGGGGACAAACTCGCTaGACCCGCCCGCCACCGCCT +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSRGQTR*TRPPPP
Trigger: AGGCGGTGGCGGGCGGGTGCAGCGAGTTTGTCCCCT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAGGGGACAAACTCGCTaGACCCGCCCGCCACCGCCT +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSRGQTR*TRPPPP
Trigger: AGGCGGTGGCGGGCGGGTGCAGCGAGTTTGTCCCCT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAGAGGCCAAGCAGTGTaGGGGCAAGGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSRGQAV*GQGDKL
Trigger: GAGTTTGTCCCCTTGCCCGCACACTGCTTGGCCTCT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCAGCAGCACGGATGGCTaGGGCAGAGAAGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYISSTDG*GREAPA
Trigger: CGCTGGAGCTTCTCTGCCGCAGCCATCCGTGCTGCT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGCAGCACGGATGGCTaGGGCAGAGAAGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPISSTDG*GREAPA
Trigger: CGCTGGAGCTTCTCTGCCGCAGCCATCCGTGCTGCT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR GCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGGGCAGAGCGATGGATaGGACCGCCTTCGCGCCCCG +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNGQSDG*DRLRAP
Trigger: CGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCC...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GAGAAAGGACTTGGCAGGCAGAAAGATTCTGAAGCTACAAGGGCTGTGTTGGAAAAAGGCTGGGAGGGTTaGTTGAGCCTGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: EKGLGRQKDSEATRAVLEKGWEG*LSLGCG
Trigger: TCCACATCCCAGGCTCAAGCAACCCTCCCAGCCTTT...TTCCAACACAGCCCTTGTAGCTTCAGAATCTTTCTGCCTGCCAAGTCCTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp CCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAACATGCTGATAAAGGCTGGGAGGGTTaGTTGAGCCTGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: PQESHSTGIEGYSSEHADKGWEG*LSLGCG
Trigger: TCCACATCCCAGGCTCAAGCAACCCTCCCAGCCTTT...ATCAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCATGGAAAAGAGCTCTTaGGGTTCTCGAAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGMEKSS*GSRRRG
Trigger: CCCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCAT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGCTTGGCTGGAGTTTATaGTTCTCTTTGGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLLGWSL*FSLESM
Trigger: CATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAG...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAAACTGTCAGAGCCACTaGTGCTGGATTCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSNCQSH*CWIQCQ
Trigger: CTGACATTGAATCCAGCACCAGTGGCTCTGACAGTT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000525123.6
ENST00000528609.5
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAGGAAAGACTCGTTCATaGAGCCAGTATTTGCGATTG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSGKTRS*SQYLRL
Trigger: CAATCGCAAATACTGGCTTCATGAACGAGTCTTTCC...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCAAGCTCTGCTAGACACTaGGTGAACTTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: YMCKDGYAAMAAQPLFVASSARH*VNFIWS
Trigger: TGACCAAATGAAGTTCACTCAGTGTCTAGCAGAGCT...TGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATCTCTTTGGAGAGCATaGTACTGTAAAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSSLWRA*YCKAWL
Trigger: AAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCCTCCAGCCAATATTaGGGGTGTTGGCATCCAATT +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGSSSQY*GCWHPI
Trigger: AATTGGATGCCAACACCCGCAATATTGGCTGGAGGA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATGTCAGAGCCACTGGTaGTGTTTCTGGATTCAATGT +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSCQSHW*CFWIQC
Trigger: ACATTGAATCCAGAAACAGCACCAGTGGCTCTGACA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357610.7
ENST00000644455.1
CDS-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACGTGCAAGGATGGGTATaGCGCCATGGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHVQGWV*RHGSTA
Trigger: GGCTGTGCTGCCATGGCGGCATACCCATCCTTGCAC...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCGTGCAAGGATGGGTATaGCGCCATGGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIVQGWV*RHGSTA
Trigger: GGCTGTGCTGCCATGGCGGCATACCCATCCTTGCAC...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTGTGCAAGGATGGGTATaGCGCCATGGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIVQGWV*RHGSTA
Trigger: GGCTGTGCTGCCATGGCGGCATACCCATCCTTGCAC...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGAGGCCAAGCAGTGTaGGGGCAAGGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFRGQAV*GQGDKL
Trigger: GAGTTTGTCCCCTTGCCCGCACACTGCTTGGCCTCT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR CCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGGGTTCTCGAAGACGTaGGTTTACTTCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGGFSKT*VYFIQL
Trigger: GAGTTGGATGAAGTAAACCCACGTCTTCGAGAACCC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCTTGGAGCCTGCAGTaGCCTCTTGGTAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGSWSLQ*PLGRQN
Trigger: ATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACAATATTGCGGGTGTTaGCATCCAATTGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSQYCGC*HPIGST
Trigger: TGTACTCCCAATTGGATGCCAACACCCGCAATATTG...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAAGTGTCCTGGTCATATaGAAACTGAATGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSSVLVI*KLNGPR
Trigger: ACGTGGACCATTCAGTTTCCATATGACCAGGACACT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CATCTGAGAGAGAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGCTCCAGGGTGAACTCTaGCACTCAAGACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: HLRENCQSHWCWIQCQTKLQGEL*HSRPQL
Trigger: AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAG...CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAATGGGTATGCCGCCATaGCAGCACAGCCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPMGMPP*QHSLSL
Trigger: CAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCAT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAGATGAAGTGCTTGTGTaGCACAGCCCAGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPDEVLV*HSPGSP
Trigger: AGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATC...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGATGAAGTGCTTGTGTaGCACAGCCCAGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLDEVLV*HSPGSP
Trigger: AGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATC...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGAGGAGGGCAGAGCGATaGATGCGACCGCCTTCGCGC +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQRRAER*MRPPSR
Trigger: GCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR CCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAGGAGGGCAGAGCGATaGATGCGACCGCCTTCGCGC +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSRRAER*MRPPSR
Trigger: GCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAAGTGAAAGTCTCTGTTaGTGGCTTCTATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSSESLC*WLLSVC
Trigger: ACAGACAGATAGAAGCCATCAACAGAGACTTTCACT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGCAGCCCAGGCAAGAGTaGAAGTCTCTGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQQPRQE*KSLLMA
Trigger: AGCCATCAACAGAGACTTTCACTCTTGCCTGGGCTG...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGGAGCCCACTCAATATaGTGGATGTTTTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGGAHSI*WMFSLM
Trigger: CATCAAGGAAAACATCCATCATATTGAGTGGGCTCC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCCATAGGTGTCTACTCTaGCAGCTTTTTGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGHRCLL*QLFADS
Trigger: GGAATCTGCAAAAAGCTGTCAGAGTAGACACCTATG...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGACTGAATGGTCCACGTaGGACAGTAGAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLTEWST*DSRRAA
Trigger: AGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGACTGAATGGTCCACGTaGGACAGTAGAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQTEWST*DSRRAA
Trigger: AGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGT...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGAGATGTCACTCAGACAAAAATATCTCTaGGGAGCTGGGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: ELSEPLVLDSMSDKEMSLRQKYL*GAGHLG
Trigger: CCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCT...GAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPSQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATGGCTTCTATCTGTCTGTGCACAGCTGAAGATAAACTGATAGGCCATAGAAGCCCTGGTGTAGTGGAGTaGGAAAGGACTTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: MASICLCTAEDKLIGHRSPGVVE*ERTWQA
Trigger: TGCCTGCCAAGTCCTTTCTCACTCCACTACACCAGG...GCTTCTATGGCCTATCAGTTTATCTTCAGCTGTGCACAGACAGATAGAAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTTATCTTCTGGTCCTTaGAACGTGACAGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGLSSGP*NVTASS
Trigger: GGAACTTGCTGTCACGTTGCAAGGACCAGAAGATAA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAGCTTTCTTTGCAGCTaGCTCTTGAGGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLSFLCS*LLRGLG
Trigger: TCCCAGACCCCTCAAGAGGCAGCTGCAAAGAAAGCT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAGCTTTCTTTGCAGCTaGCTCTTGAGGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSSFLCS*LLRGLG
Trigger: TCCCAGACCCCTCAAGAGGCAGCTGCAAAGAAAGCT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TTTGGAGAGCATGATACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTAGTGCAAGGATGGGTATaGCGCCATGGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: FGEHDTVKPGFLFCILPLVQGWV*RHGSTA
Trigger: GGCTGTGCTGCCATGGCGGCATACCCATCCTTGCAC...TAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp GAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGAGATGTCACTCGGGTATGTGTATATGTaGAAGGATGGGTATGCCGCC +
Preference number: 4 (lower is better)
Translates to: ELSEPLVLDSMSDKEMSLGYVYM*KDGYAA
Trigger: GGCGGCATACCCATCCTTGCACATATACACATACCC...GAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAAATGAGGTATATCTGTaGTGCCATGAAGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSNEVYL*CHEVCH
Trigger: ATGGCACACTTCATGGCAGCACAGATATACCTCATT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTGTGGCAAATGAGGTATATCTGTaGTGCCATGAAGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: YMCKDGYAAMAAQPLFVANEVYL*CHEVCH
Trigger: ATGGCACACTTCATGGCAGCACAGATATACCTCATT...TGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCAGAGGCCAAGCAGTGTaGGGGCAAGGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIRGQAV*GQGDKL
Trigger: GAGTTTGTCCCCTTGCCCGCACACTGCTTGGCCTCT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR GCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAGCAGCACGGATGGCTaGGGCAGAGAAGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSSSTDG*GREAPA
Trigger: CGCTGGAGCTTCTCTGCCGCAGCCATCCGTGCTGCT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAATATTCTGGTTGAGGTaGAGCCCACTCAATATGATG +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSIFWLR*SPLNMM
Trigger: CATCATATTGAGTGGGCTCCACCTCAACCAGAATAT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATTGGGAGTACAAGAGTaGCTTCATCCCTACAGTATA +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSLGVQE*LHPYSI
Trigger: TATACTGTAGGGATGAAGCCACTCTTGTACTCCCAA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCTCCAGGGTGAACTCTaGCACTCAAGACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLLQGEL*HSRPQL
Trigger: AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACTCCAGGGTGAACTCTaGCACTCAAGACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPLQGEL*HSRPQL
Trigger: AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCAACTGTCAGAGCCACTaGTGCTGTTTCTGGATTCAA +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGNCQSH*CCFWIQ
Trigger: TTGAATCCAGAAACAGCACCAGTGGCTCTGACAGTT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000357610.7
ENST00000644455.1
CDS-3UTR CCA 90 bp AAGGACTTCAGATCTTCGATGGTAAAGTGGGTGTCTCTTTTATTACCCAGGGTGATGGGTATGCCGCCATaGCAGCACAGCCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KDFRSSMVKWVSLLLPRVMGMPP*QHSLSL
Trigger: CAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCAT...CACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGTATATGTGCAAGGATaGGTATGCCGCCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLVYVQG*VCRHGS
Trigger: GCTGCCATGGCGGCATACCCATCCTTGCACATATAC...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAGGACTTCAGATCTTCGATGGTAAAGTGGGTGTCTCTTTTATTACCCAGGGTGGATGAAGTGCTTGTGTaGCACAGCCCAGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: KDFRSSMVKWVSLLLPRVDEVLV*HSPGSP
Trigger: AGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATC...CACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCACCCAAGCAGCACGGATaGCTGCGGCAGAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSPKQHG*LRQRSS
Trigger: GGAGCTTCTCTGCCGCAGCCATCCGTGCTGCTTGGG...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp TATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTAACTGTCAGAGCCACTaGTGCTGGATTCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: YVYMCKDGYAAMAAQPLFNCQSH*CWIQCQ
Trigger: CTGACATTGAATCCAGCACCAGTGGCTCTGACAGTT...AAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp TTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAACATGCTGTTCTTCCGAACATGCTaGTGCGTAGCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: FPKRAIQQALRVILPNMLFFRTC*CVAEFG
Trigger: ACCAAACTCTGCTACGCATCAGCATGTTCGGAAGAA...CAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAAGGGTTGTTTGCCACTaGCAGGAGGTAGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPRVVCH*QEVALQ
Trigger: TTGCAATGCTACCTCCTGTCAGTGGCAAACAACCCT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACTTTCTCCAGGGTaGACTCTGGCACTCAAGACC +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPLLSPG*TLALKT
Trigger: GGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAA...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTTACTTTCTCCAGGGTaGACTCTGGCACTCAAGACC +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQLLSPG*TLALKT
Trigger: GGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAA...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAGACAAAAATATCTCTaGGGAGCTGGGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLRQKYL*GAGHLG
Trigger: CCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGAGATGTCACTCGGGAATACCTCATTGTaGGCAAACCTGACATACAGC +
Preference number: 4 (lower is better)
Translates to: ELSEPLVLDSMSDKEMSLGNTSL*ANLTYS
Trigger: GCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCC...GAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGCTTTCTTTGCAGCTaGCTCTTGAGGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFSFLCS*LLRGLG
Trigger: TCCCAGACCCCTCAAGAGGCAGCTGCAAAGAAAGCT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGGTGCAAGGATGGGTATaGCGCCATGGCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQVQGWV*RHGSTA
Trigger: GGCTGTGCTGCCATGGCGGCATACCCATCCTTGCAC...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGGGGTATGTGTATATGTaGAAGGATGGGTATGCCGCC +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQGYVYM*KDGYAA
Trigger: GGCGGCATACCCATCCTTGCACATATACACATACCC...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAGGGTATGTGTATATGTaGAAGGATGGGTATGCCGCC +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPGYVYM*KDGYAA
Trigger: GGCGGCATACCCATCCTTGCACATATACACATACCC...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TCATTTGGTCAGGATCACAAAAGTCCAGAAGGGTGTCACAGACATGATAACCTAAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SFGQDHKSPEGCHRHDNLKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...TAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CATCTGAGAGAGAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGGAGGTATATCTGTGCTaGCATGAAGTGTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: HLRENCQSHWCWIQCQTKEVYLC*HEVCHE
Trigger: CTCATGGCACACTTCATGGCAGCACAGATATACCTC...CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp GAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGAGATGTCACTCGAGGTATATCTGTGCTaGCATGAAGTGTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: ELSEPLVLDSMSDKEMSLEVYLC*HEVCHE
Trigger: CTCATGGCACACTTCATGGCAGCACAGATATACCTC...GAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCAATGAGGTATATCTGTaGTGCCATGAAGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGNEVYL*CHEVCH
Trigger: ATGGCACACTTCATGGCAGCACAGATATACCTCATT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTATGGAAAAGAGCTCTTaGGGTTCTCGAAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSMEKSS*GSRRRG
Trigger: CCCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCAT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAGACCTCACATTCAATTaGCCATCTTGGAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPDLTFN*PSWSLQ
Trigger: CTGCAGGCTCCAAGATGGCCAATTGAATGTGAGGTC...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTGACCTCACATTCAATTaGCCATCTTGGAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSDLTFN*PSWSLQ
Trigger: CTGCAGGCTCCAAGATGGCCAATTGAATGTGAGGTC...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATTACGACTGTGGCCATaGAAATCACAATACAACAGA +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSLRLWP*KSQYNR
Trigger: TCTGTTGTATTGTGATTTCCATGGCCACAGTCGTAA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGAGATGTCACTCCTTCATACCTGGAGCTaGCTCTTGGCTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: ELSEPLVLDSMSDKEMSLLHTWS*LLAGVY
Trigger: ATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAG...GAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTGCTCCTAGGCCAGTTTaGCTTCATACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIAPRPV*LHTWSW
Trigger: CCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGC...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCGCTCCTAGGCCAGTTTaGCTTCATACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIAPRPV*LHTWSW
Trigger: CCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGC...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACGCTCCTAGGCCAGTTTaGCTTCATACCTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHAPRPV*LHTWSW
Trigger: CCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGC...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATGGGTATGCCGCCATaGCAGCACAGCCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIMGMPP*QHSLSL
Trigger: CAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCAT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCGTATATGTGCAAGGATaGGTATGCCGCCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFVYVQG*VCRHGS
Trigger: GCTGCCATGGCGGCATACCCATCCTTGCACATATAC...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGATGAAGTGCTTGTGTaGCACAGCCCAGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSDEVLV*HSPGSP
Trigger: AGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGATGAAGTGCTTGTGTaGCACAGCCCAGGCTCACCT +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLDEVLV*HSPGSP
Trigger: AGGTGAGCCTGGGCTGTGCCACACAAGCACTTCATC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATCCCAAGCAGCACGGATaGCTGCGGCAGAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNPKQHG*LRQRSS
Trigger: GGAGCTTCTCTGCCGCAGCCATCCGTGCTGCTTGGG...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp CTGATAGGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTATGATAGCCAAAGGCTaGGAGGGTTGCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LIGHRSFSFCRVSGIKSSMIAKG*EGCLSL
Trigger: CAGGCTCAAGCAACCCTCCCAGCCTTTGGCTATCAT...AGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCCTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTTTCTTCCGAACATGCTaGTGCGTAGCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSFFRTC*CVAEFG
Trigger: ACCAAACTCTGCTACGCATCAGCATGTTCGGAAGAA...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp CCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAACATGCTGATCCATTCAACAGGCATTaGGGGTTATTCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: PQESHSTGIEGYSSEHADPFNRH*GLFFRT
Trigger: TGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGG...ATCAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCAGCCCAGGCAAGAGTaGAAGTCTCTGTTGATGGCT +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSQPRQE*KSLLMA
Trigger: AGCCATCAACAGAGACTTTCACTCTTGCCTGGGCTG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGGGTCAGTTCGCAAGGTaGGTTCATACTCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQGQFAR*VHTHRC
Trigger: ACACCTATGAGTATGAACTCACCTTGCGAACTGACC...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTGGTCAGTTCGCAAGGTaGGTTCATACTCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSGQFAR*VHTHRC
Trigger: ACACCTATGAGTATGAACTCACCTTGCGAACTGACC...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCACTGAATGGTCCACGTaGGACAGTAGAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYITEWST*DSRRAA
Trigger: AGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACACTGAATGGTCCACGTaGGACAGTAGAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHTEWST*DSRRAA
Trigger: AGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGGGTTGTTTGCCACTaGCAGGAGGTAGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFRVVCH*QEVALQ
Trigger: TTGCAATGCTACCTCCTGTCAGTGGCAAACAACCCT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGTGGAGCTTGCAGAACTaGGACTGGATAGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLWSLQN*DWIGLF
Trigger: AAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCA...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAGCTATGTTTGCTAGGTaGACAGGAAGACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPAMFAR*TGRPSE
Trigger: CTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGC...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTGCTATGTTTGCTAGGTaGACAGGAAGACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSAMFAR*TGRPSE
Trigger: CTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGC...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TCATTTGGTCAGGATCACAAAAGTCCAGAAGGGTGTCACAGACATGATAACCTATCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: SFGQDHKSPEGCHRHDNLSQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...TAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPISQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGGGAATACCTCATTGTaGGCAAACCTGACATACAGC +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLGNTSL*ANLTYS
Trigger: GCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCC...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCTGTGAAGAGGAGACTTaGGAAGCAGCCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: GHRSFSFCRVSGIKSSFSCEEET*EAAWCS
Trigger: ACTACACCAGGCTGCTTCTCAAGTCTCCTCTTCACA...GGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp ATGGCTTCTATCTGTCTGTGCACAGCTGAAGATAAACTGATAGGCCATAGAAGCTGTGAAGAGGAGACTTaGGAAGCAGCCTGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: MASICLCTAEDKLIGHRSCEEET*EAAWCS
Trigger: ACTACACCAGGCTGCTTCTCAAGTCTCCTCTTCACA...GCTTCTATGGCCTATCAGTTTATCTTCAGCTGTGCACAGACAGATAGAAGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTTCCTCCAGCCAATATTaGGGGTGTTGGCATCCAATT +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSSSSQY*GCWHPI
Trigger: AATTGGATGCCAACACCCGCAATATTGGCTGGAGGA...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGTTCCTGCTAGGCTCCTaGATAAAGTTTGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLFLLGS*IKFGAC
Trigger: GCAAGCTCCAAACTTTATGCAGGAGCCTAGCAGGAA...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTTCCTGCTAGGCTCCTaGATAAAGTTTGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQFLLGS*IKFGAC
Trigger: GCAAGCTCCAAACTTTATGCAGGAGCCTAGCAGGAA...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTCCTGCTAGGCTCCTaGATAAAGTTTGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPFLLGS*IKFGAC
Trigger: GCAAGCTCCAAACTTTATGCAGGAGCCTAGCAGGAA...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGCTTTCTTTGCAGCTaGCTCTTGAGGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPISFLCS*LLRGLG
Trigger: TCCCAGACCCCTCAAGAGGCAGCTGCAAAGAAAGCT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACCTGGCTTCTTATTCTaGATTCTCCCTTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSPGFLF*ILPLFL
Trigger: TAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGG...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGTGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLCCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAGAGGCCAAGCAGTGTaGGGGCAAGGGGACAAACTC +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSRGQAV*GQGDKL
Trigger: GAGTTTGTCCCCTTGCCCGCACACTGCTTGGCCTCT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTTGTCAGAGCCACTGGTaGTGGATTCAATGTCAGACA +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSCQSHW*WIQCQT
Trigger: TGTCTGACATTGAATCCAGCACCAGTGGCTCTGACA...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGTGTCAGAGCCACTGGTaGTGGATTCAATGTCAGACA +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLCQSHW*WIQCQT
Trigger: TGTCTGACATTGAATCCAGCACCAGTGGCTCTGACA...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525123.6
ENST00000528609.5
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GAGAAAGGACTTGGCAGGCAGAAAGATTCTGAAGCTACAAGGGCTGTGTTGGAACAGAGTTTGGTAAACTaGCTCTCTGAGCTTACAGCT +
Preference number: 4 (lower is better)
Translates to: EKGLGRQKDSEATRAVLEQSLVN*LSELTA
Trigger: AGCTGTAAGCTCAGAGAGGCAGTTTACCAAACTCTG...TTCCAACACAGCCCTTGTAGCTTCAGAATCTTTCTGCCTGCCAAGTCCTTTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp TTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAACATGCTGCAGAGTTTGGTAAACTaGCTCTCTGAGCTTACAGCT +
Preference number: 4 (lower is better)
Translates to: FPKRAIQQALRVILPNMLQSLVN*LSELTA
Trigger: AGCTGTAAGCTCAGAGAGGCAGTTTACCAAACTCTG...CAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTGGGTTCTCGAAGACGTaGGTTTACTTCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSGFSKT*VYFIQL
Trigger: GAGTTGGATGAAGTAAACCCACGTCTTCGAGAACCC...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTGTGTTGGCATCCAATTaGGAGTACAAGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSVLASN*EYKSGF
Trigger: GAAGCCACTCTTGTACTCCCAATTGGATGCCAACAC...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCTCCAGGGTGAACTCTaGCACTCAAGACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSLQGEL*HSRPQL
Trigger: AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACTCCAGGGTGAACTCTaGCACTCAAGACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLLQGEL*HSRPQL
Trigger: AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TCATTTGGTCAGGATCACAAAAGTCCAGAAGGGTGTCACAGACATGATAACCTACTCCAGGGTGAACTCTaGCACTCAAGACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: SFGQDHKSPEGCHRHDNLLQGEL*HSRPQL
Trigger: AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAG...TAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSSCPSS*NFLWIS
Trigger: GGAAATCCACAAGAAATTCCATGAACTTGGACAAGA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCTTCATACCTGGAGCTaGCTCTTGGCTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLLHTWS*LLAGVY
Trigger: ATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTGTTTGGCTTCATACCTaGAGCTGGCTCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIVWLHT*SWLLAG
Trigger: TCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAAC...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGTTTGGCTTCATACCTaGAGCTGGCTCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSVWLHT*SWLLAG
Trigger: TCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAAC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGTTTGGCTTCATACCTaGAGCTGGCTCTTGGCTGGA +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLVWLHT*SWLLAG
Trigger: TCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAAC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGTATATGTGCAAGGATaGGTATGCCGCCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLVYVQG*VCRHGS
Trigger: GCTGCCATGGCGGCATACCCATCCTTGCACATATAC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCGTATATGTGCAAGGATaGGTATGCCGCCATGGCAGC +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIVYVQG*VCRHGS
Trigger: GCTGCCATGGCGGCATACCCATCCTTGCACATATAC...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACAGAGCCACTGGTGCTaGATTCAATGTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPQSHWC*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525123.6
ENST00000528609.5
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCATGATAGCCAAAGGCTaGGAGGGTTGCTTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: NHLFPQESHSTGIEGYSSMIAKG*EGCLSL
Trigger: CAGGCTCAAGCAACCCTCCCAGCCTTTGGCTATCAT...GGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTTCTTCCGAACATGCTaGTGCGTAGCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFFFRTC*CVAEFG
Trigger: ACCAAACTCTGCTACGCATCAGCATGTTCGGAAGAA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACCATTCAACAGGCATTaGGGGTTATTCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPPFNRH*GLFFRT
Trigger: TGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGCCATTCAACAGGCATTaGGGGTTATTCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQPFNRH*GLFFRT
Trigger: TGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGG...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTCCATTCAACAGGCATTaGGGGTTATTCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSPFNRH*GLFFRT
Trigger: TGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGG...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGGAGCCCACTCAATATaGTGGATGTTTTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLGAHSI*WMFSLM
Trigger: CATCAAGGAAAACATCCATCATATTGAGTGGGCTCC...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGCATAGGTGTCTACTCTaGCAGCTTTTTGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQHRCLL*QLFADS
Trigger: GGAATCTGCAAAAAGCTGTCAGAGTAGACACCTATG...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAGGGTTGTTTGCCACTaGCAGGAGGTAGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHRVVCH*QEVALQ
Trigger: TTGCAATGCTACCTCCTGTCAGTGGCAAACAACCCT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGAGCTTGCAGAACTaGGACTGGATAGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFWSLQN*DWIGLF
Trigger: AAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTACTTTCTCCAGGGTaGACTCTGGCACTCAAGACC +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSLLSPG*TLALKT
Trigger: GGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAA...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGACAAAAATATCTCTaGGGAGCTGGGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIRQKYL*GAGHLG
Trigger: CCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAGACAAAAATATCTCTaGGGAGCTGGGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSRQKYL*GAGHLG
Trigger: CCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAGACAAAAATATCTCTaGGGAGCTGGGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHRQKYL*GAGHLG
Trigger: CCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGGAAAGACTCGTTCATaGAGCCAGTATTTGCGATTG +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLGKTRS*SQYLRL
Trigger: CAATCGCAAATACTGGCTTCATGAACGAGTCTTTCC...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTGGAAAGACTCGTTCATaGAGCCAGTATTTGCGATTG +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSGKTRS*SQYLRL
Trigger: CAATCGCAAATACTGGCTTCATGAACGAGTCTTTCC...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGTCTCTTTGGAGAGCATaGTACTGTAAAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLSLWRA*YCKAWL
Trigger: AAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGA...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCTCTTTGGAGAGCATaGTACTGTAAAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQSLWRA*YCKAWL
Trigger: AAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGA...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTTGGAGAGCATGATACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTATCTCAAAACCCCCGATaGAGTGCTTGTGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: FGEHDTVKPGFLFCILPLSQNPR*SACVAQ
Trigger: CTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGA...TAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCATTGTGAGCAAACCTaGCATACAGCAGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFHCEQT*HTAVGL
Trigger: CAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CTGATAGGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTCAGGCAGAAAGATTCTaGAGCTACAAGGGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LIGHRSFSFCRVSGIKSSQAERF*SYKGCV
Trigger: AACACAGCCCTTGTAGCTTCAGAATCTTTCTGCCTG...AGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCCTATCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp ATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGCTGAGGAAATGGATGTaGAGAGGAGACTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: IIFFPKRAIQQALRVILPLRKWM*RGDLRS
Trigger: GCTTCTCAAGTCTCCTCTTCACATCCATTTCCTCAG...CGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp GCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCCCTGAGGAAATGGATGTaGAGAGGAGACTTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AIEASPFAGCLVSNHLFPLRKWM*RGDLRS
Trigger: GCTTCTCAAGTCTCCTCTTCACATCCATTTCCTCAG...GGGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTTTATCTTCTGGTCCTTaGAACGTGACAGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSLSSGP*NVTASS
Trigger: GGAACTTGCTGTCACGTTGCAAGGACCAGAAGATAA...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCGGGTATGTGTATATGTaGAAGGATGGGTATGCCGCC +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIGYVYM*KDGYAA
Trigger: GGCGGCATACCCATCCTTGCACATATACACATACCC...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGAAACCCCCGATGAAGTaGTTGTGTGGCACAGCCCAG +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQKPPMK*LCGTAQ
Trigger: CTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFCCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCCTTTTGCAGGGTGTCTaGTATCAAATCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGLLQGV*YQIIFF
Trigger: GAAAAAGATGATTTGATACCAGACACCCTGCAAAAG...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTATGGAAAAGAGCTCTTaGGGTTCTCGAAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSMEKSS*GSRRRG
Trigger: CCCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCAT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCATGGAAAAGAGCTCTTaGGGTTCTCGAAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIMEKSS*GSRRRG
Trigger: CCCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCAT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTCTTGGAGCCTGCAGTaGCCTCTTGGTAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFSWSLQ*PLGRQN
Trigger: ATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATTCAATTGGCCATCTTaGAGCCTGCAGTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLFNWPS*SLQWPL
Trigger: AAGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAA...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTTCAATTGGCCATCTTaGAGCCTGCAGTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIFNWPS*SLQWPL
Trigger: AAGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGACCTCACATTCAATTaGCCATCTTGGAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSDLTFN*PSWSLQ
Trigger: CTGCAGGCTCCAAGATGGCCAATTGAATGTGAGGTC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCTGATAGAAATATTCTaGTTGAGGTGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLLIEIF*LRWSPL
Trigger: GAGTGGGCTCCACCTCAACCAGAATATTTCTATCAG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTCTGATAGAAATATTCTaGTTGAGGTGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSLIEIF*LRWSPL
Trigger: GAGTGGGCTCCACCTCAACCAGAATATTTCTATCAG...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACTGATAGAAATATTCTaGTTGAGGTGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPLIEIF*LRWSPL
Trigger: GAGTGGGCTCCACCTCAACCAGAATATTTCTATCAG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCAATATTGCGGGTGTTaGCATCCAATTGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLQYCGC*HPIGST
Trigger: TGTACTCCCAATTGGATGCCAACACCCGCAATATTG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTCAATATTGCGGGTGTTaGCATCCAATTGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSQYCGC*HPIGST
Trigger: TGTACTCCCAATTGGATGCCAACACCCGCAATATTG...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGSCPSS*NFLWIS
Trigger: GGAAATCCACAAGAAATTCCATGAACTTGGACAAGA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCTTGGCTGGAGTTTATaGTTCTCTTTGGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLLGWSL*FSLESM
Trigger: CATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACTTGGCTGGAGTTTATaGTTCTCTTTGGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPLGWSL*FSLESM
Trigger: CATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGCTTGGCTGGAGTTTATaGTTCTCTTTGGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQLGWSL*FSLESM
Trigger: CATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAG...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCTTCATACCTGGAGCTaGCTCTTGGCTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFLHTWS*LLAGVY
Trigger: ATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGATGGGTATGCCGCCATaGCAGCACAGCCTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQMGMPP*QHSLSL
Trigger: CAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCAT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGGTGCGTTTCCAAAGCTaGGAACATGTTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQVRFQS*EHVTSG
Trigger: TCCAGAAGTAACATGTTCCCAGCTTTGGAAACGCAC...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR CCA 90 bp AAGGACTTCAGATCTTCGATGGTAAAGTGGGTGTCTCTTTTATTACCCAGGGTGCAGAGCCACTGGTGCTaGATTCAATGTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: KDFRSSMVKWVSLLLPRVQSHWC*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTG...CACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
3UTR CAA 72 bp ATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAACATGCTGATGCGTAGC +
Preference number: 4 (lower is better)
Translates to: IIFFPKRAIQQA*RVILPNMLMRS
Trigger: GCTACGCATCAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp GCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCCCCATTCAACAGGCATTaGGGGTTATTCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: AIEASPFAGCLVSNHLFPPFNRH*GLFFRT
Trigger: TGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGG...GGGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCCATTCAACAGGCATTaGGGGTTATTCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFPFNRH*GLFFRT
Trigger: TGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAGTGAAAGTCTCTGTTaGTGGCTTCTATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLSESLC*WLLSVC
Trigger: ACAGACAGATAGAAGCCATCAACAGAGACTTTCACT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCATAGGTGTCTACTCTaGCAGCTTTTTGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFHRCLL*QLFADS
Trigger: GGAATCTGCAAAAAGCTGTCAGAGTAGACACCTATG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCGGTCAGTTCGCAAGGTaGGTTCATACTCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIGQFAR*VHTHRC
Trigger: ACACCTATGAGTATGAACTCACCTTGCGAACTGACC...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAACTGAATGGTCCACGTaGGACAGTAGAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSTEWST*DSRRAA
Trigger: AGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCACTGAATGGTCCACGTaGGACAGTAGAAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSTEWST*DSRRAA
Trigger: AGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATGGTCATATGGAAACTaGATGGTCCACGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLWSYGN*MVHVRQ
Trigger: CTGTCTCACGTGGACCATTCAGTTTCCATATGACCA...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTGGTCATATGGAAACTaGATGGTCCACGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHWSYGN*MVHVRQ
Trigger: CTGTCTCACGTGGACCATTCAGTTTCCATATGACCA...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTGGAGCTTGCAGAACTaGGACTGGATAGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHWSLQN*DWIGLF
Trigger: AAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCA...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCTTCAAGAAGTCTTTTaGTCATGTTCCTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLLQEVF*SCSWCT
Trigger: GGTACACCAGGAACATGATCAAAAGACTTCTTGAAG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACGCTATGTTTGCTAGGTaGACAGGAAGACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHAMFAR*TGRPSE
Trigger: CTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGC...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGCTATGTTTGCTAGGTaGACAGGAAGACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSAMFAR*TGRPSE
Trigger: CTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAATGAGGTATGCATCTTaGCCACATGCCCACAGTGTA +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLMRYAS*PHAHSV
Trigger: TACACTGTGGGCATGTGGTCAAGATGCATACCTCAT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGGGAATACCTCATTGTaGGCAAACCTGACATACAGC +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSGNTSL*ANLTYS
Trigger: GCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACGGGAATACCTCATTGTaGGCAAACCTGACATACAGC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHGNTSL*ANLTYS
Trigger: GCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCC...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTCTGGATGGTAGGCTaGAAACTAGTCAGTGACATT +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPFWMVG*KLVSDI
Trigger: AATGTCACTGACTAGTTTTCAGCCTACCATCCAGAA...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR TCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTTTCTGGATGGTAGGCTaGAAACTAGTCAGTGACATT +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSFWMVG*KLVSDI
Trigger: AATGTCACTGACTAGTTTTCAGCCTACCATCCAGAA...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCATAGTCTGCTTTAGGTaGGTTTCCAAAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GHRSFSFCRVSGIKSSFSIVCFR*VSKAGN
Trigger: GTTCCCAGCTTTGGAAACGCACCTAAAGCAGACTAT...GGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAAGAAGCTTCTCCTTTTaGAGGGTGTCTGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPRSFSF*RVSGIK
Trigger: TTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTTATCTTCTGGTCCTTaGAACGTGACAGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFLSSGP*NVTASS
Trigger: GGAACTTGCTGTCACGTTGCAAGGACCAGAAGATAA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGACTCTGACAGCTTTTTaGAGATTCCCACTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLTLTAF*RFPLSN
Trigger: GTTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTCCTCCAGCCAATATTaGGGGTGTTGGCATCCAATT +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPISSSQY*GCWHPI
Trigger: AATTGGATGCCAACACCCGCAATATTGGCTGGAGGA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTTCCTGCTAGGCTCCTaGATAAAGTTTGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIFLLGS*IKFGAC
Trigger: GCAAGCTCCAAACTTTATGCAGGAGCCTAGCAGGAA...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLCCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTGCTGCCATGAAGTGTaGCATGAGAACACACTTCAG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPICCHEV*HENTLQ
Trigger: CTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCGAGGTATATCTGTGCTaGCATGAAGTGTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIEVYLC*HEVCHE
Trigger: CTCATGGCACACTTCATGGCAGCACAGATATACCTC...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACGAGGTATATCTGTGCTaGCATGAAGTGTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHEVYLC*HEVCHE
Trigger: CTCATGGCACACTTCATGGCAGCACAGATATACCTC...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAATGAGGTATATCTGTaGTGCCATGAAGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLNEVYL*CHEVCH
Trigger: ATGGCACACTTCATGGCAGCACAGATATACCTCATT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACGGGTTCTCGAAGACGTaGGTTTACTTCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHGFSKT*VYFIQL
Trigger: GAGTTGGATGAAGTAAACCCACGTCTTCGAGAACCC...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGGGTTCTCGAAGACGTaGGTTTACTTCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLGFSKT*VYFIQL
Trigger: GAGTTGGATGAAGTAAACCCACGTCTTCGAGAACCC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTCTTGGAGCCTGCAGTaGCCTCTTGGTAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPISWSLQ*PLGRQN
Trigger: ATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACGTGTTGGCATCCAATTaGGAGTACAAGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHVLASN*EYKSGF
Trigger: GAAGCCACTCTTGTACTCCCAATTGGATGCCAACAC...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCGTGTTGGCATCCAATTaGGAGTACAAGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIVLASN*EYKSGF
Trigger: GAAGCCACTCTTGTACTCCCAATTGGATGCCAACAC...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGTGTTGGCATCCAATTaGGAGTACAAGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLVLASN*EYKSGF
Trigger: GAAGCCACTCTTGTACTCCCAATTGGATGCCAACAC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCACTCCAGGGTGAACTCTaGCACTCAAGACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSLQGEL*HSRPQL
Trigger: AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAG...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCACTGGTGCTGTTTCTaGATTCAATGTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLHWCCF*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGAAACAGCACCAGTG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357610.7
ENST00000644455.1
CDS-3UTR CCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCTTGGCTGGAGTTTATaGTTCTCTTTGGAGAGCATG +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFLGWSL*FSLESM
Trigger: CATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCTTCATACCTGGAGCTaGCTCTTGGCTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHLHTWS*LLAGVY
Trigger: ATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CTGATAGGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTGTGCGTTTCCAAAGCTaGGAACATGTTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LIGHRSFSFCRVSGIKSSVRFQS*EHVTSG
Trigger: TCCAGAAGTAACATGTTCCCAGCTTTGGAAACGCAC...AGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCCTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACAGAGCCACTGGTGCTaGATTCAATGTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLQSHWC*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000525123.6
ENST00000528609.5
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TCATTTGGTCAGGATCACAAAAGTCCAGAAGGGTGTCACAGACATGATAACCTAAACTGTCAGAGCCACTaGTGCTGGATTCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: SFGQDHKSPEGCHRHDNLNCQSH*CWIQCQ
Trigger: CTGACATTGAATCCAGCACCAGTGGCTCTGACAGTT...TAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTACATTTGTCACATTGTaGGAGAGAGGTGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSTFVTL*ERGANS
Trigger: CGAATTAGCACCTCTCTCCCACAATGTGACAAATGT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACCATTCAACAGGCATTaGGGGTTATTCTTCCGAACA +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLPFNRH*GLFFRT
Trigger: TGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGTGAAAGTCTCTGTTaGTGGCTTCTATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFSESLC*WLLSVC
Trigger: ACAGACAGATAGAAGCCATCAACAGAGACTTTCACT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGGAGCCCACTCAATATaGTGGATGTTTTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLGAHSI*WMFSLM
Trigger: CATCAAGGAAAACATCCATCATATTGAGTGGGCTCC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTGGAGCCCACTCAATATaGTGGATGTTTTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIGAHSI*WMFSLM
Trigger: CATCAAGGAAAACATCCATCATATTGAGTGGGCTCC...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCATAGGTGTCTACTCTaGCAGCTTTTTGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSHRCLL*QLFADS
Trigger: GGAATCTGCAAAAAGCTGTCAGAGTAGACACCTATG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAGGGTTGTTTGCCACTaGCAGGAGGTAGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSRVVCH*QEVALQ
Trigger: TTGCAATGCTACCTCCTGTCAGTGGCAAACAACCCT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCTTACTTTCTCCAGGGTaGACTCTGGCACTCAAGACC +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSLLSPG*TLALKT
Trigger: GGTCTTGAGTGCCAGAGTTCACCCTGGAGAAAGTAA...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAGACAAAAATATCTCTaGGGAGCTGGGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSRQKYL*GAGHLG
Trigger: CCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAGCTCTGCTAGACACTaGGTGAACTTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSSSARH*VNFIWS
Trigger: TGACCAAATGAAGTTCACTCAGTGTCTAGCAGAGCT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAGCTCTGCTAGACACTaGGTGAACTTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHSSARH*VNFIWS
Trigger: TGACCAAATGAAGTTCACTCAGTGTCTAGCAGAGCT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGCTCTGCTAGACACTaGGTGAACTTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPISSARH*VNFIWS
Trigger: TGACCAAATGAAGTTCACTCAGTGTCTAGCAGAGCT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCAGCTCTGCTAGACACTaGGTGAACTTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYISSARH*VNFIWS
Trigger: TGACCAAATGAAGTTCACTCAGTGTCTAGCAGAGCT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAACAGGAAGACCATCTaGGAGAGAACTGTCAGAGCC +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSNRKTI*ERTVRA
Trigger: GGCTCTGACAGTTCTCTCTCAGATGGTCTTCCTGTT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TTTGGAGAGCATGATACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTAGCTATGTTTGCTAGGTaGACAGGAAGACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: FGEHDTVKPGFLFCILPLAMFAR*TGRPSE
Trigger: CTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGC...TAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAACATCTTCTTTTTCTaGGTCAGCTCATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLNIFFF*VSSSAM
Trigger: CATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTCTCTTTGGAGAGCATaGTACTGTAAAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHSLWRA*YCKAWL
Trigger: AAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGA...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATGTAAGGTCAGTGCATaGGTGCACAACACAGTATAC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLCKVSA*VHNTVY
Trigger: GTATACTGTGTTGTGCACTCATGCACTGACCTTACA...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TTTGGAGAGCATGATACTGTAAAGCCTGGCTTCTTATTCTGCATTCTCCCTTTACATTGTGAGCAAACCTaGCATACAGCAGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: FGEHDTVKPGFLFCILPLHCEQT*HTAVGL
Trigger: CAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATG...TAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACAGTATCATGCTCTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp ATGGCTTCTATCTGTCTGTGCACAGCTGAAGATAAACTGATAGGCCATAGAAGCTTCTGGATGGTAGGCTaGAAACTAGTCAGTGACATT +
Preference number: 4 (lower is better)
Translates to: MASICLCTAEDKLIGHRSFWMVG*KLVSDI
Trigger: AATGTCACTGACTAGTTTTCAGCCTACCATCCAGAA...GCTTCTATGGCCTATCAGTTTATCTTCAGCTGTGCACAGACAGATAGAAGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp ATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGTTCTGGATGGTAGGCTaGAAACTAGTCAGTGACATT +
Preference number: 4 (lower is better)
Translates to: IIFFPKRAIQQALRVILPFWMVG*KLVSDI
Trigger: AATGTCACTGACTAGTTTTCAGCCTACCATCCAGAA...CGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATTCCAAATAGGCAGCTaGTTACACAAGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLFQIGS*LHKRSR
Trigger: CCTGCTTCTCTTGTGTAATCAGCTGCCTATTTGGAA...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACATAGTCTGCTTTAGGTaGGTTTCCAAAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHIVCFR*VSKAGN
Trigger: GTTCCCAGCTTTGGAAACGCACCTAAAGCAGACTAT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTATAGTCTGCTTTAGGTaGGTTTCCAAAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSIVCFR*VSKAGN
Trigger: GTTCCCAGCTTTGGAAACGCACCTAAAGCAGACTAT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGAAGCTTCTCCTTTTaGAGGGTGTCTGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFRSFSF*RVSGIK
Trigger: TTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATGGCTTCTATCTGTCTGTGCACAGCTGAAGATAAACTGATAGGCCATAGAAGCAGAAGCTTCTCCTTTTaGAGGGTGTCTGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: MASICLCTAEDKLIGHRSRSFSF*RVSGIK
Trigger: TTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCT...GCTTCTATGGCCTATCAGTTTATCTTCAGCTGTGCACAGACAGATAGAAGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTTATCTTCTGGTCCTTaGAACGTGACAGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPILSSGP*NVTASS
Trigger: GGAACTTGCTGTCACGTTGCAAGGACCAGAAGATAA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATTATCTTCTGGTCCTTaGAACGTGACAGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLLSSGP*NVTASS
Trigger: GGAACTTGCTGTCACGTTGCAAGGACCAGAAGATAA...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATAGCTTTCTTTGCAGCTaGCTCTTGAGGGGTCTGGGA +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNSFLCS*LLRGLG
Trigger: TCCCAGACCCCTCAAGAGGCAGCTGCAAAGAAAGCT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGAGATGTCACTCCCTGGCTTCTTATTCTaGATTCTCCCTTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: ELSEPLVLDSMSDKEMSLPGFLF*ILPLFL
Trigger: TAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGG...GAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGGGGTATGTGTATATGTaGAAGGATGGGTATGCCGCC +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQGYVYM*KDGYAA
Trigger: GGCGGCATACCCATCCTTGCACATATACACATACCC...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TCATTTGGTCAGGATCACAAAAGTCCAGAAGGGTGTCACAGACATGATAACCTAAGGTCAGTGCATGAGTaGACAACACAGTATACCACA +
Preference number: 4 (lower is better)
Translates to: SFGQDHKSPEGCHRHDNLRSVHE*TTQYTT
Trigger: TGTGGTATACTGTGTTGTGCACTCATGCACTGACCT...TAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCATCTTGACCACATaGCCACAGTGTAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFCILTT*PQCKYK
Trigger: TTTGTACTTACACTGTGGGCATGTGGTCAAGATGCA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AAGGACTTCAGATCTTCGATGGTAAAGTGGGTGTCTCTTTTATTACCCAGGGTGTGCATCTTGACCACATaGCCACAGTGTAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: KDFRSSMVKWVSLLLPRVCILTT*PQCKYK
Trigger: TTTGTACTTACACTGTGGGCATGTGGTCAAGATGCA...CACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAATGAGGTATATCTGTaGTGCCATGAAGTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFNEVYL*CHEVCH
Trigger: ATGGCACACTTCATGGCAGCACAGATATACCTCATT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAATGGAAAAGAGCTCTTaGGGTTCTCGAAGACGTGGG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSMEKSS*GSRRRG
Trigger: CCCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCAT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTTCAATTGGCCATCTTaGAGCCTGCAGTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQFNWPS*SLQWPL
Trigger: AAGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCATTCAATTGGCCATCTTaGAGCCTGCAGTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSFNWPS*SLQWPL
Trigger: AAGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAA...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAGACCTCACATTCAATTaGCCATCTTGGAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSDLTFN*PSWSLQ
Trigger: CTGCAGGCTCCAAGATGGCCAATTGAATGTGAGGTC...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGGACCTCACATTCAATTaGCCATCTTGGAGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQDLTFN*PSWSLQ
Trigger: CTGCAGGCTCCAAGATGGCCAATTGAATGTGAGGTC...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCATATTCTGGTTGAGGTaGAGCCCACTCAATATGATG +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFIFWLR*SPLNMM
Trigger: CATCATATTGAGTGGGCTCCACCTCAACCAGAATAT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACTGATAGAAATATTCTaGTTGAGGTGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLLIEIF*LRWSPL
Trigger: GAGTGGGCTCCACCTCAACCAGAATATTTCTATCAG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCTGATAGAAATATTCTaGTTGAGGTGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSLIEIF*LRWSPL
Trigger: GAGTGGGCTCCACCTCAACCAGAATATTTCTATCAG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAGTGTCCTGGTCATATaGAAACTGAATGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHSVLVI*KLNGPR
Trigger: ACGTGGACCATTCAGTTTCCATATGACCAGGACACT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAGTGTCCTGGTCATATaGAAACTGAATGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSSVLVI*KLNGPR
Trigger: ACGTGGACCATTCAGTTTCCATATGACCAGGACACT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCAGTGTCCTGGTCATATaGAAACTGAATGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYISVLVI*KLNGPR
Trigger: ACGTGGACCATTCAGTTTCCATATGACCAGGACACT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATCTCCAGGGTGAACTCTaGCACTCAAGACCACAGCTT +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNLQGEL*HSRPQL
Trigger: AAGCTGTGGTCTTGAGTGCCAGAGTTCACCCTGGAG...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGTTACGACTGTGGCCATaGAAATCACAATACAACAGA +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLLRLWP*KSQYNR
Trigger: TCTGTTGTATTGTGATTTCCATGGCCACAGTCGTAA...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTTACGACTGTGGCCATaGAAATCACAATACAACAGA +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQLRLWP*KSQYNR
Trigger: TCTGTTGTATTGTGATTTCCATGGCCACAGTCGTAA...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCACTGGTGCTGTTTCTaGATTCAATGTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFHWCCF*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGAAACAGCACCAGTG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357610.7
ENST00000644455.1
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAACTGTCAGAGCCACTaGTGCTGTTTCTGGATTCAA +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPINCQSH*CCFWIQ
Trigger: TTGAATCCAGAAACAGCACCAGTGGCTCTGACAGTT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000357610.7
ENST00000644455.1
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGTGCGTTTCCAAAGCTaGGAACATGTTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSVRFQS*EHVTSG
Trigger: TCCAGAAGTAACATGTTCCCAGCTTTGGAAACGCAC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR CCA 90 bp AATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGTGCGTTTCCAAAGCTaGGAACATGTTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: NHLFPQESHSTGIEGYSSVRFQS*EHVTSG
Trigger: TCCAGAAGTAACATGTTCCCAGCTTTGGAAACGCAC...GGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
3UTR CAA 72 bp ACATCTTCTTTTTCTGAGTCAGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGACCATCTGAGAGAGAAC +
Preference number: 4 (lower is better)
Translates to: TSSFSESAHLLC*LGEQEDHLREN
Trigger: GTTCTCTCTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTTCTTCCGAACATGCTaGTGCGTAGCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQFFRTC*CVAEFG
Trigger: ACCAAACTCTGCTACGCATCAGCATGTTCGGAAGAA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCATTCTTCCGAACATGCTaGTGCGTAGCAGAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSFFRTC*CVAEFG
Trigger: ACCAAACTCTGCTACGCATCAGCATGTTCGGAAGAA...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAGTGAAAGTCTCTGTTaGTGGCTTCTATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHSESLC*WLLSVC
Trigger: ACAGACAGATAGAAGCCATCAACAGAGACTTTCACT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGGGTCAGTTCGCAAGGTaGGTTCATACTCATAGGTGT +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQGQFAR*VHTHRC
Trigger: ACACCTATGAGTATGAACTCACCTTGCGAACTGACC...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCTGGTCATATGGAAACTaGATGGTCCACGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSWSYGN*MVHVRQ
Trigger: CTGTCTCACGTGGACCATTCAGTTTCCATATGACCA...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATAGGGTTGTTTGCCACTaGCAGGAGGTAGCATTGCAA +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNRVVCH*QEVALQ
Trigger: TTGCAATGCTACCTCCTGTCAGTGGCAAACAACCCT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATAGACAAAAATATCTCTaGGGAGCTGGGCATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNRQKYL*GAGHLG
Trigger: CCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCTTCAAGAAGTCTTTTaGTCATGTTCCTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHLQEVF*SCSWCT
Trigger: GGTACACCAGGAACATGATCAAAAGACTTCTTGAAG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCCTTCAAGAAGTCTTTTaGTCATGTTCCTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYILQEVF*SCSWCT
Trigger: GGTACACCAGGAACATGATCAAAAGACTTCTTGAAG...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAGCTATGTTTGCTAGGTaGACAGGAAGACCATCTGAG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSAMFAR*TGRPSE
Trigger: CTCAGATGGTCTTCCTGTTCACCTAGCAAACATAGC...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAACATCTTCTTTTTCTaGGTCAGCTCATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFNIFFF*VSSSAM
Trigger: CATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGATCTATTGGTTAAAATaGGGTATATCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQIYWLK*GISVLP
Trigger: TGGCAGCACAGATATACCTCATTTTAACCAATAGAT...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGCATTGTGAGCAAACCTaGCATACAGCAGTAGGACTG +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQHCEQT*HTAVGL
Trigger: CAGTCCTACTGCTGTATGTCAGGTTTGCTCACAATG...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCAGAAGCTTCTCCTTTTaGAGGGTGTCTGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: NHLFPQESHSTGIEGYSSRSFSF*RVSGIK
Trigger: TTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCT...GGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR GCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAACTCTGACAGCTTTTTaGAGATTCCCACTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLTLTAF*RFPLSN
Trigger: GTTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTACTCTGACAGCTTTTTaGAGATTCCCACTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSTLTAF*RFPLSN
Trigger: GTTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCTTCCTGCTAGGCTCCTaGATAAAGTTTGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSFLLGS*IKFGAC
Trigger: GCAAGCTCCAAACTTTATGCAGGAGCCTAGCAGGAA...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACCTGGCTTCTTATTCTaGATTCTCCCTTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPPGFLF*ILPLFL
Trigger: TAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCCTGGCTTCTTATTCTaGATTCTCCCTTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLPGFLF*ILPLFL
Trigger: TAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTGCATCTTGACCACATaGCCACAGTGTAAGTACAAA +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYICILTT*PQCKYK
Trigger: TTTGTACTTACACTGTGGGCATGTGGTCAAGATGCA...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTGTCAGAGCCACTGGTaGTGGATTCAATGTCAGACA +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQCQSHW*WIQCQT
Trigger: TGTCTGACATTGAATCCAGCACCAGTGGCTCTGACA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525123.6
ENST00000528609.5
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCATGTCAGAGCCACTGGTaGTGGATTCAATGTCAGACA +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSCQSHW*WIQCQT
Trigger: TGTCTGACATTGAATCCAGCACCAGTGGCTCTGACA...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGGGGTTCTCGAAGACGTaGGTTTACTTCATCCAACTC +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQGFSKT*VYFIQL
Trigger: GAGTTGGATGAAGTAAACCCACGTCTTCGAGAACCC...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTCTTGGAGCCTGCAGTaGCCTCTTGGTAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQSWSLQ*PLGRQN
Trigger: ATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATATTCTGGTTGAGGTaGAGCCCACTCAATATGATG +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIIFWLR*SPLNMM
Trigger: CATCATATTGAGTGGGCTCCACCTCAACCAGAATAT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCATATTCTGGTTGAGGTaGAGCCCACTCAATATGATG +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIIFWLR*SPLNMM
Trigger: CATCATATTGAGTGGGCTCCACCTCAACCAGAATAT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTGGGAGTACAAGAGTaGCTTCATCCCTACAGTATA +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSLGVQE*LHPYSI
Trigger: TATACTGTAGGGATGAAGCCACTCTTGTACTCCCAA...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTTGGGAGTACAAGAGTaGCTTCATCCCTACAGTATA +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPILGVQE*LHPYSI
Trigger: TATACTGTAGGGATGAAGCCACTCTTGTACTCCCAA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGGTGTTGGCATCCAATTaGGAGTACAAGAGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQVLASN*EYKSGF
Trigger: GAAGCCACTCTTGTACTCCCAATTGGATGCCAACAC...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATTCTTACGACTGTaGCCATGGAAATCACAATAC +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPLFLRL*PWKSQY
Trigger: GTATTGTGATTTCCATGGCCACAGTCGTAAGAATAA...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTTTATTCTTACGACTGTaGCCATGGAAATCACAATAC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSLFLRL*PWKSQY
Trigger: GTATTGTGATTTCCATGGCCACAGTCGTAAGAATAA...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPSCPSS*NFLWIS
Trigger: GGAAATCCACAAGAAATTCCATGAACTTGGACAAGA...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTTCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSSCPSS*NFLWIS
Trigger: GGAAATCCACAAGAAATTCCATGAACTTGGACAAGA...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQSCPSS*NFLWIS
Trigger: GGAAATCCACAAGAAATTCCATGAACTTGGACAAGA...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGCTTCATACCTGGAGCTaGCTCTTGGCTGGAGTTTAT +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQLHTWS*LLAGVY
Trigger: ATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAG...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCACAGAGCCACTGGTGCTaGATTCAATGTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSQSHWC*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTG...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAACTGTCAGAGCCACTaGTGCTGGATTCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSNCQSH*CWIQCQ
Trigger: CTGACATTGAATCCAGCACCAGTGGCTCTGACAGTT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAACTGTCAGAGCCACTaGTGCTGGATTCAATGTCAG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSNCQSH*CWIQCQ
Trigger: CTGACATTGAATCCAGCACCAGTGGCTCTGACAGTT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCTTTTCTTGCTCCCAGTaGCACTGTCAGGTTAGGGTA +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSFSCSQ*HCQVRV
Trigger: TACCCTAACCTGACAGTGCCACTGGGAGCAAGAAAA...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAGGAGCCCACTCAATATaGTGGATGTTTTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSGAHSI*WMFSLM
Trigger: CATCAAGGAAAACATCCATCATATTGAGTGGGCTCC...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCGGAGCCCACTCAATATaGTGGATGTTTTCCTTGATG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSGAHSI*WMFSLM
Trigger: CATCAAGGAAAACATCCATCATATTGAGTGGGCTCC...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCATAGGTGTCTACTCTaGCAGCTTTTTGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSHRCLL*QLFADS
Trigger: GGAATCTGCAAAAAGCTGTCAGAGTAGACACCTATG...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTGGTCATATGGAAACTaGATGGTCCACGTGAGACAG +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNWSYGN*MVHVRQ
Trigger: CTGTCTCACGTGGACCATTCAGTTTCCATATGACCA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTGGAGCTTGCAGAACTaGGACTGGATAGGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNWSLQN*DWIGLF
Trigger: AAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGGGAAAGACTCGTTCATaGAGCCAGTATTTGCGATTG +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQGKTRS*SQYLRL
Trigger: CAATCGCAAATACTGGCTTCATGAACGAGTCTTTCC...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAGCTCTGCTAGACACTaGGTGAACTTCATTTGGTCA +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSSSARH*VNFIWS
Trigger: TGACCAAATGAAGTTCACTCAGTGTCTAGCAGAGCT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAACATCTTCTTTTTCTaGGTCAGCTCATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHNIFFF*VSSSAM
Trigger: CATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAACATCTTCTTTTTCTaGGTCAGCTCATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLNIFFF*VSSSAM
Trigger: CATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCAACATCTTCTTTTTCTaGGTCAGCTCATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYINIFFF*VSSSAM
Trigger: CATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTCTCTTTGGAGAGCATaGTACTGTAAAGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQSLWRA*YCKAWL
Trigger: AAGCCAGGCTTTACAGTATCATGCTCTCCAAAGAGA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCATCTATTGGTTAAAATaGGGTATATCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFIYWLK*GISVLP
Trigger: TGGCAGCACAGATATACCTCATTTTAACCAATAGAT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTTCCAAATAGGCAGCTaGTTACACAAGAGAAGCAGG +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQFQIGS*LHKRSR
Trigger: CCTGCTTCTCTTGTGTAATCAGCTGCCTATTTGGAA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525123.6
ENST00000645431.2
CDS-3UTR GCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAATAGTCTGCTTTAGGTaGGTTTCCAAAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSIVCFR*VSKAGN
Trigger: GTTCCCAGCTTTGGAAACGCACCTAAAGCAGACTAT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCATAGTCTGCTTTAGGTaGGTTTCCAAAGCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSIVCFR*VSKAGN
Trigger: GTTCCCAGCTTTGGAAACGCACCTAAAGCAGACTAT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTTCCTGCTAGGCTCCTaGATAAAGTTTGGAGCTTGC +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNFLLGS*IKFGAC
Trigger: GCAAGCTCCAAACTTTATGCAGGAGCCTAGCAGGAA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTGTCAGAGCCACTGGTaGTGTTTCTGGATTCAATGT +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQCQSHW*CFWIQC
Trigger: ACATTGAATCCAGAAACAGCACCAGTGGCTCTGACA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000357610.7
ENST00000644455.1
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCCTGGCTTCTTATTCTaGATTCTCCCTTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFPGFLF*ILPLFL
Trigger: TAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTATACCACAAGTAAATaGAGTTCCCAGTCATACATC +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFYTTSK*SSQSYI
Trigger: GATGTATGACTGGGAACTGCATTTACTTGTGGTATA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGCTTTTGCAGGGTGTCTaGTATCAAATCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: IIFFPKRAIQQALRVILPLLQGV*YQIIFF
Trigger: GAAAAAGATGATTTGATACCAGACACCCTGCAAAAG...CGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTCTTGGAGCCTGCAGTaGCCTCTTGGTAGACAAAAT +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNSWSLQ*PLGRQN
Trigger: ATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCTGATAGAAATATTCTaGTTGAGGTGGAGCCCACTC +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSLIEIF*LRWSPL
Trigger: GAGTGGGCTCCACCTCAACCAGAATATTTCTATCAG...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAGTGTCCTGGTCATATaGAAACTGAATGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSSVLVI*KLNGPR
Trigger: ACGTGGACCATTCAGTTTCCATATGACCAGGACACT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAAGACTCCTTCAGAATaGTTTTATAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSKTPSE*FYNACS
Trigger: TGAACAGGCATTATAAAACCATTCTGAAGGAGTCTT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGAAGACTCCTTCAGAATaGTTTTATAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQKTPSE*FYNACS
Trigger: TGAACAGGCATTATAAAACCATTCTGAAGGAGTCTT...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTTACGACTGTGGCCATaGAAATCACAATACAACAGA +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYILRLWP*KSQYNR
Trigger: TCTGTTGTATTGTGATTTCCATGGCCACAGTCGTAA...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFSCPSS*NFLWIS
Trigger: GGAAATCCACAAGAAATTCCATGAACTTGGACAAGA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAGTGCGTTTCCAAAGCTaGGAACATGTTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSVRFQS*EHVTSG
Trigger: TCCAGAAGTAACATGTTCCCAGCTTTGGAAACGCAC...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATCAGAGCCACTGGTGCTaGATTCAATGTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNQSHWC*IQCQTK
Trigger: CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTG...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGCTTCAAGAAGTCTTTTaGTCATGTTCCTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQLQEVF*SCSWCT
Trigger: GGTACACCAGGAACATGATCAAAAGACTTCTTGAAG...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGGAAAGACTCGTTCATaGAGCCAGTATTTGCGATTG +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNGKTRS*SQYLRL
Trigger: CAATCGCAAATACTGGCTTCATGAACGAGTCTTTCC...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACATCTATTGGTTAAAATaGGGTATATCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHIYWLK*GISVLP
Trigger: TGGCAGCACAGATATACCTCATTTTAACCAATAGAT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATCTATTGGTTAAAATaGGGTATATCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIIYWLK*GISVLP
Trigger: TGGCAGCACAGATATACCTCATTTTAACCAATAGAT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR TCA 90 bp TCATTTGGTCAGGATCACAAAAGTCCAGAAGGGTGTCACAGACATGATAACCTAATCTATTGGTTAAAATaGGGTATATCTGTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SFGQDHKSPEGCHRHDNLIYWLK*GISVLP
Trigger: TGGCAGCACAGATATACCTCATTTTAACCAATAGAT...TAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR GCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAGAAGCTTCTCCTTTTaGAGGGTGTCTGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSRSFSF*RVSGIK
Trigger: TTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAGAAGCTTCTCCTTTTaGAGGGTGTCTGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSRSFSF*RVSGIK
Trigger: TTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGAGAAGCTTCTCCTTTTaGAGGGTGTCTGGTATCAAA +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQRSFSF*RVSGIK
Trigger: TTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTTATCTTCTGGTCCTTaGAACGTGACAGCAAGTTCC +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNLSSGP*NVTASS
Trigger: GGAACTTGCTGTCACGTTGCAAGGACCAGAAGATAA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGACTCTGACAGCTTTTTaGAGATTCCCACTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQTLTAF*RFPLSN
Trigger: GTTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCCTGGCTTCTTATTCTaGATTCTCCCTTTATTCTTA +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHPGFLF*ILPLFL
Trigger: TAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTATACCACAAGTAAATaGAGTTCCCAGTCATACATC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHYTTSK*SSQSYI
Trigger: GATGTATGACTGGGAACTGCATTTACTTGTGGTATA...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTATACCACAAGTAAATaGAGTTCCCAGTCATACATC +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIYTTSK*SSQSYI
Trigger: GATGTATGACTGGGAACTGCATTTACTTGTGGTATA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR GCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCGTTTTAATGTTTTCTTaGTCCCAGTGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSVLMFS*SQWHCQ
Trigger: CTGACAGTGCCACTGGGAGCAAGAAAACATTAAAAC...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCTTTTGCAGGGTGTCTaGTATCAAATCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHLLQGV*YQIIFF
Trigger: GAAAAAGATGATTTGATACCAGACACCCTGCAAAAG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACTTTTGCAGGGTGTCTaGTATCAAATCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLLLQGV*YQIIFF
Trigger: GAAAAAGATGATTTGATACCAGACACCCTGCAAAAG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAATATTCTGGTTGAGGTaGAGCCCACTCAATATGATG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSIFWLR*SPLNMM
Trigger: CATCATATTGAGTGGGCTCCACCTCAACCAGAATAT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATCAATATTGCGGGTGTTaGCATCCAATTGGGAGTACA +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNQYCGC*HPIGST
Trigger: TGTACTCCCAATTGGATGCCAACACCCGCAATATTG...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTTATTCTTACGACTGTaGCCATGGAAATCACAATAC +
Preference number: 4 (lower is better)
Translates to: HECTTQYTTSKCSSQSYILFLRL*PWKSQY
Trigger: GTATTGTGATTTCCATGGCCACAGTCGTAAGAATAA...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTATTCTTACGACTGTaGCCATGGAAATCACAATAC +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHLFLRL*PWKSQY
Trigger: GTATTGTGATTTCCATGGCCACAGTCGTAAGAATAA...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTTCTTGTCCAAGTTCATaGAATTTCTTGTGGATTTCC +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPISCPSS*NFLWIS
Trigger: GGAAATCCACAAGAAATTCCATGAACTTGGACAAGA...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTGCGTTTCCAAAGCTaGGAACATGTTACTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNVRFQS*EHVTSG
Trigger: TCCAGAAGTAACATGTTCCCAGCTTTGGAAACGCAC...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCACATTTGTCACATTGTaGGAGAGAGGTGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSTFVTL*ERGANS
Trigger: CGAATTAGCACCTCTCTCCCACAATGTGACAAATGT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATCTTCAAGAAGTCTTTTaGTCATGTTCCTGGTGTACC +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNLQEVF*SCSWCT
Trigger: GGTACACCAGGAACATGATCAAAAGACTTCTTGAAG...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAACATCTTCTTTTTCTaGGTCAGCTCATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSNIFFF*VSSSAM
Trigger: CATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATACTCTGACAGCTTTTTaGAGATTCCCACTCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNTLTAF*RFPLSN
Trigger: GTTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATAAGGTTGGCTGCTTTTaGAGAGTAGAAGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNKVGCF*RVEANP
Trigger: AGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR GCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTTTTAATGTTTTCTTaGTCCCAGTGGCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNVLMFS*SQWHCQ
Trigger: CTGACAGTGCCACTGGGAGCAAGAAAACATTAAAAC...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATATATTCTGGTTGAGGTaGAGCCCACTCAATATGATG +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNIFWLR*SPLNMM
Trigger: CATCATATTGAGTGGGCTCCACCTCAACCAGAATAT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTTGGGAGTACAAGAGTaGCTTCATCCCTACAGTATA +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNLGVQE*LHPYSI
Trigger: TATACTGTAGGGATGAAGCCACTCTTGTACTCCCAA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAAGACTCCTTCAGAATaGTTTTATAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLKTPSE*FYNACS
Trigger: TGAACAGGCATTATAAAACCATTCTGAAGGAGTCTT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAAGACTCCTTCAGAATaGTTTTATAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHKTPSE*FYNACS
Trigger: TGAACAGGCATTATAAAACCATTCTGAAGGAGTCTT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAGACTCCTTCAGAATaGTTTTATAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIKTPSE*FYNACS
Trigger: TGAACAGGCATTATAAAACCATTCTGAAGGAGTCTT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAAGACTCCTTCAGAATaGTTTTATAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSKTPSE*FYNACS
Trigger: TGAACAGGCATTATAAAACCATTCTGAAGGAGTCTT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCTTACGACTGTGGCCATaGAAATCACAATACAACAGA +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSLRLWP*KSQYNR
Trigger: TCTGTTGTATTGTGATTTCCATGGCCACAGTCGTAA...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCATTACGACTGTGGCCATaGAAATCACAATACAACAGA +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSLRLWP*KSQYNR
Trigger: TCTGTTGTATTGTGATTTCCATGGCCACAGTCGTAA...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATAACATCTTCTTTTTCTaGGTCAGCTCATCTGCTATG +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNNIFFF*VSSSAM
Trigger: CATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTATGTGAATCTCTGTTaGTGGCTTCTATCTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNYVNLC*WLLSVC
Trigger: ACAGACAGATAGAAGCCATCAACAGAGATTCACATA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCACAAATCACCAATATTTaGTTCCAGACTTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSQITNI*FQTSVM
Trigger: CATGACTGAAGTCTGGAATCAAATATTGGTGATTTG...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR TCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCAAATCACCAATATTTaGTTCCAGACTTCAGTCATG +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSQITNI*FQTSVM
Trigger: CATGACTGAAGTCTGGAATCAAATATTGGTGATTTG...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCTTTTGCAGGGTGTCTaGTATCAAATCATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSLLQGV*YQIIFF
Trigger: GAAAAAGATGATTTGATACCAGACACCCTGCAAAAG...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCATTATTCTTACGACTGTaGCCATGGAAATCACAATAC +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSLFLRL*PWKSQY
Trigger: GTATTGTGATTTCCATGGCCACAGTCGTAAGAATAA...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CCA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAAGACTCCTTCAGAATaGTTTTATAATGCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSKTPSE*FYNACS
Trigger: TGAACAGGCATTATAAAACCATTCTGAAGGAGTCTT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS GCA 90 bp GCGACCGCCTTCGCGCCCCGGCCCGTCCCAAGCAGCACGGATGGCTaGGGCAGAGAAGCTCCAGCGAGGCAGGCGGCCACCGCACTTAAG +
Preference number: 5 (lower is better)
Translates to: ATAFAPRPVPSSTDG*GREAPARQAATALK
Trigger: CTTAAGTGCGGTGGCCGCCTGCCTCGCTGGAGCTTCTCTGCCGCAGCCATCCGTGCTGCTTGGGACGGGCCGGGGCGCGAAGGCGGTCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000525123.6
ENST00000528244.5
ENST00000529154.5
ENST00000529712.5
ENST00000530969.1
ENST00000531835.1
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643830.1
ENST00000643952.1
ENST00000645178.1
ENST00000645431.2
ENST00000647499.1
CDS GCA 90 bp GCGGGGAAGGAGAGCAGAAACTTCCCAGGAGGGCAGAGCGATGGATaGGACCGCCTTCGCGCCCCGGCCCGTCCCAAGCAGCACGGATGG +
Preference number: 5 (lower is better)
Translates to: AGKESRNFPGGQSDG*DRLRAPARPKQHGW
Trigger: CCATCCGTGCTGCTTGGGACGGGCCGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCTGGGAAGTTTCTGCTCTCCTTCCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000529154.5
ENST00000529712.5
ENST00000530969.1
ENST00000642469.1
ENST00000643830.1
ENST00000647499.1
CDS CCA 90 bp AGGAGCGGGGAAGGAGAGCAGAAACTTCCCAGGAGGGCAGAGCGATaGATGCGACCGCCTTCGCGCCCCGGCCCGTCCCAAGCAGCACGG +
Preference number: 5 (lower is better)
Translates to: RSGEGEQKLPRRAER*MRPPSRPGPSQAAR
Trigger: CCGTGCTGCTTGGGACGGGCCGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCTGGGAAGTTTCTGCTCTCCTTCCCCGCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000529154.5
ENST00000529712.5
ENST00000530969.1
ENST00000642469.1
ENST00000643830.1
ENST00000647499.1
CDS GCA 90 bp GCGAGGCAGGCGGCCACCGCACTTAAGTACAGAGGCCAAGCAGTGTaGGGGCAAGGGGACAAACTCGCTGCACCCGCCCGCCACCGCCTT +
Preference number: 5 (lower is better)
Translates to: ARQAATALKYRGQAV*GQGDKLAAPARHRL
Trigger: AAGGCGGTGGCGGGCGGGTGCAGCGAGTTTGTCCCCTTGCCCGCACACTGCTTGGCCTCTGTACTTAAGTGCGGTGGCCGCCTGCCTCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000525123.6
ENST00000528244.5
ENST00000529154.5
ENST00000529712.5
ENST00000530969.1
ENST00000531835.1
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643830.1
ENST00000643952.1
ENST00000645178.1
ENST00000645431.2
ENST00000647499.1
CDS CCA 90 bp GACAGGGAGGGCAGCGTATCTTCCCGCTTCTTCTTCCCAAGGTGCTaGCCCCATGCTTCCCTTTCCCTGAGAAAGGAGATGCTCGCCACA +
Preference number: 5 (lower is better)
Translates to: DREGSVSSRFFFPRC*PHASLSLRKEMLAT
Trigger: TGTGGCGAGCATCTCCTTTCTCAGGGAAAGGGAAGCATGGGGCCAGCACCTTGGGAAGAAGAAGCGGGAAGATACGCTGCCCTCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529154.5
ENST00000529712.5
ENST00000642469.1
ENST00000643830.1
CDS-3UTR CAA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCACCCCCGATGAAGTGCTaGTGTGGCACAGCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSPPMKC*CGTAQA
Trigger: AGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGG...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS GCA 90 bp GAAAGAAATGGGTATGGGAGCACGCGACGAAGTCGTCTCGGTAGGTaGCGATGGAAAAAGGTCAGGGGGTTGGGAAAGTGGGCCCTAAAG +
Preference number: 5 (lower is better)
Translates to: ERNGYGSTRRSRLGR*RWKKVRGLGKWALK
Trigger: CTTTAGGGCCCACTTTCCCAACCCCCTGACCTTTTTCCATCGGCACCTACCGAGACGACTTCGTCGCGTGCTCCCATACCCATTTCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000529154.5
ENST00000529712.5
ENST00000642469.1
ENST00000643830.1
CDS CCA 90 bp AATGGGTATGGGAGCACGCGACGAAGTCGTCTCGGTAGGTGCCGATaGAAAAAGGTCAGGGGGTTGGGAAAGTGGGCCCTAAAGATTGAA +
Preference number: 5 (lower is better)
Translates to: NGYGSTRRSRLGRCR*KKVRGLGKWALKIE
Trigger: TTCAATCTTTAGGGCCCACTTTCCCAACCCCCTGACCTTTTTCCATCGGCACCTACCGAGACGACTTCGTCGCGTGCTCCCATACCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000529154.5
ENST00000529712.5
ENST00000642469.1
ENST00000643830.1
CDS TCA 90 bp CCCGCTTCTTCTTCCCAAGGTGCTGGCCCCATGCTTCCCTTTCCCTaGGAAAGGAGATGCTCGCCACAGGAAAGTGAAAGAAATGGGTAT +
Preference number: 5 (lower is better)
Translates to: PASSSQGAGPMLPFP*ERRCSPQESERNGY
Trigger: ATACCCATTTCTTTCACTTTCCTGTGGCGAGCATCTCCTTTCTCAGGGAAAGGGAAGCATGGGGCCAGCACCTTGGGAAGAAGAAGCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529154.5
ENST00000529712.5
ENST00000642469.1
ENST00000643830.1
CDS-3UTR CAA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCAATTCAATTGGCCATCTaGGAGCCTGCAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSIQLAI*EPAVAS
Trigger: AGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAAT...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCCAGCACAGCCTCTCTTaGTGGCAGGATATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGQHSLS*WQDICS
Trigger: GGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTG...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACCCCCGATGAAGTGCTaGTGTGGCACAGCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPPPMKC*CGTAQA
Trigger: AGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAACATGCTGCAAAGGCTGGGAGGGTaGCTTGAGCCTGGGATGTGG +
Preference number: 5 (lower is better)
Translates to: FPKRAIQQALRVILPNMLQRLGG*LEPGMW
Trigger: CCACATCCCAGGCTCAAGCAACCCTCCCAGCCTTTG...CAGCATGTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCATTCAATTGGCCATCTaGGAGCCTGCAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGIQLAI*EPAVAS
Trigger: AGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAAT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCATTGACAATTCCTCGTTaGCCTCCCACTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: VSNLKTPDEVLVWHSPGSLTIPR*PPTLEL
Trigger: CAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAA...TGAGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCACCTGGAGCTGGCTCTaGGCTGGAGTTTATGGTTCT +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGTWSWL*AGVYGS
Trigger: AGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AAGGACTTCAGATCTTCGATGGTAAAGTGGGTGTCTCTTTTATTACCCAGGGTGCCCCCGATGAAGTGCTaGTGTGGCACAGCCCAGGCT +
Preference number: 5 (lower is better)
Translates to: KDFRSSMVKWVSLLLPRVPPMKC*CGTAQA
Trigger: AGCCTGGGCTGTGCCACACAAGCACTTCATCGGGGG...CACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCCATGAGGTATGCATCTaGACCACATGCCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGHEVCI*TTCPQC
Trigger: ACACTGTGGGCATGTGGTCAAGATGCATACCTCATG...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGTGACAGCAAGTTCCTaGACAATTCCTCGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGVTASS*TIPRLP
Trigger: AGGCAAACGAGGAATTGTCAAGGAACTTGCTGTCAC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCAGCACAGCCTCTCTTaGTGGCAGGATATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLQHSLS*WQDICS
Trigger: GGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACAGCACAGCCTCTCTTaGTGGCAGGATATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPQHSLS*WQDICS
Trigger: GGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCCAAAGGCTGGGAGGGTaGCTTGAGCCTGGGATGTGG +
Preference number: 5 (lower is better)
Translates to: NHLFPQESHSTGIEGYSSQRLGG*LEPGMW
Trigger: CCACATCCCAGGCTCAAGCAACCCTCCCAGCCTTTG...GGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGATTCAATTGGCCATCTaGGAGCCTGCAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLIQLAI*EPAVAS
Trigger: AGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAAT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTATTCAATTGGCCATCTaGGAGCCTGCAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSIQLAI*EPAVAS
Trigger: AGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAAT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTCTCCTCCAGCCAATATaGCGGGTGTTGGCATCCAAT +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSLLQPI*RVLASN
Trigger: ATTGGATGCCAACACCCGCAATATTGGCTGGAGGAG...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGCTCCTCCAGCCAATATaGCGGGTGTTGGCATCCAAT +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLLLQPI*RVLASN
Trigger: ATTGGATGCCAACACCCGCAATATTGGCTGGAGGAG...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCAGACCACAGCTTTCTTaGCAGCTGCCTCTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFRPQLS*QLPLEG
Trigger: CCCCTCAAGAGGCAGCTGCAAAGAAAGCTGTGGTCT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGGTGAAAAGAGAACTTTaGATCATGTTCCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLVKREL*IMFLVY
Trigger: GTACACCAGGAACATGATCAAAAGTTCTCTTTTCAC...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS TCA 90 bp AGTAGAAGGGCTGCTGCCCATCATCCGTGTTGTTCTTGTAGTACTTaGTTTCATTTCCTTCTCTCCTCCAGCCAATATTGCGGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: SRRAAAHHPCCSCST*FHFLLSSSQYCGCW
Trigger: CCAACACCCGCAATATTGGCTGGAGGAGAGAAGGAAATGAAATCAAGTACTACAAGAACAACACGGATGATGGGCAGCAGCCCTTCTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GAGAAAGGACTTGGCAGGCAGAAAGATTCTGAAGCTACAAGGGCTGTGTTGGAAGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 5 (lower is better)
Translates to: EKGLGRQKDSEATRAVLEAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...TTCCAACACAGCCCTTGTAGCTTCAGAATCTTTCTGCCTGCCAAGTCCTTTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAATGGAAAAGAGCTCTaGGGGTTCTCGAAGACGTGG +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLNGKEL*GFSKTW
Trigger: CCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCATT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAATGGAAAAGAGCTCTaGGGGTTCTCGAAGACGTGG +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSNGKEL*GFSKTW
Trigger: CCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCATT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTTGACAATTCCTCGTTaGCCTCCCACTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQLTIPR*PPTLEL
Trigger: CAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAA...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTACTCTGACAGCTTTTaGCAGATTCCCACTCTCAAA +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGYSDSF*QIPTLK
Trigger: TTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGTA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAGGTGTTGGCATCCAATaGGGAGTACAAGAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPGVGIQ*GVQEWL
Trigger: AAGCCACTCTTGTACTCCCAATTGGATGCCAACACC...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGGTGTTGGCATCCAATaGGGAGTACAAGAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLGVGIQ*GVQEWL
Trigger: AAGCCACTCTTGTACTCCCAATTGGATGCCAACACC...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACCAATATTGCGGGTGTaGGCATCCAATTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPPILRV*ASNWEY
Trigger: GTACTCCCAATTGGATGCCAACACCCGCAATATTGG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAGACCACAGCTTTCTTaGCAGCTGCCTCTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLRPQLS*QLPLEG
Trigger: CCCCTCAAGAGGCAGCTGCAAAGAAAGCTGTGGTCT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TATGTGTATATGTGCAAGGATGGGTATGCCGCCATGGCAGCACAGCCTCTCTTTAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 5 (lower is better)
Translates to: YVYMCKDGYAAMAAQPLFKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...AAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CAA 90 bp GGCAGGATATCTGCTCCTAGGCCAGTTTGGCTTCATACCTGGAGCTGGCTCTTGGAATTCTCTGAGTTTTaGAAAAAGGTTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: GRISAPRPVWLHTWSWLLEFSEF*KKVGCF
Trigger: AAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTC...CAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAGGAGCAGATATCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CAA 90 bp AAGGACTTCAGATCTTCGATGGTAAAGTGGGTGTCTCTTTTATTACCCAGGGTGACCTGGAGCTGGCTCTaGGCTGGAGTTTATGGTTCT +
Preference number: 5 (lower is better)
Translates to: KDFRSSMVKWVSLLLPRVTWSWL*AGVYGS
Trigger: AGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGT...CACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCCAGCACAGCCTCTCTTaGTGGCAGGATATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIQHSLS*WQDICS
Trigger: GGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTG...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGCATGAGGTATGCATCTaGACCACATGCCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQHEVCI*TTCPQC
Trigger: ACACTGTGGGCATGTGGTCAAGATGCATACCTCATG...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 5 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAATTCAATTGGCCATCTaGGAGCCTGCAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLIQLAI*EPAVAS
Trigger: AGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAAT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGGTGACAGCAAGTTCCTaGACAATTCCTCGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQVTASS*TIPRLP
Trigger: AGGCAAACGAGGAATTGTCAAGGAACTTGCTGTCAC...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCCCAATATTGCGGGTGTaGGCATCCAATTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFPILRV*ASNWEY
Trigger: GTACTCCCAATTGGATGCCAACACCCGCAATATTGG...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCTCCTCCAGCCAATATaGCGGGTGTTGGCATCCAAT +
Preference number: 5 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHLLQPI*RVLASN
Trigger: ATTGGATGCCAACACCCGCAATATTGGCTGGAGGAG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCCTCCTCCAGCCAATATaGCGGGTGTTGGCATCCAAT +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYILLQPI*RVLASN
Trigger: ATTGGATGCCAACACCCGCAATATTGGCTGGAGGAG...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACTCCTCCAGCCAATATaGCGGGTGTTGGCATCCAAT +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLLLQPI*RVLASN
Trigger: ATTGGATGCCAACACCCGCAATATTGGCTGGAGGAG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCTCTTCAAGAAGTCTTTaGATCATGTTCCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGSSRSL*IMFLVY
Trigger: GTACACCAGGAACATGATCAAAAGACTTCTTGAAGA...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAACCTGGAGCTGGCTCTaGGCTGGAGTTTATGGTTCT +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLTWSWL*AGVYGS
Trigger: AGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCACCTGGAGCTGGCTCTaGGCTGGAGTTTATGGTTCT +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYITWSWL*AGVYGS
Trigger: AGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GGCCATAGAAGCTTCTCCTTTTGCAGGGTGTCTGGTATCAAATCATCTTTTTCCGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 5 (lower is better)
Translates to: GHRSFSFCRVSGIKSSFSAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...GGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAGAAGCTTCTATGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAATGGAAAAGAGCTCTaGGGGTTCTCGAAGACGTGG +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSNGKEL*GFSKTW
Trigger: CCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCATT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACAATGGAAAAGAGCTCTaGGGGTTCTCGAAGACGTGG +
Preference number: 5 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHNGKEL*GFSKTW
Trigger: CCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCATT...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCAATGGAAAAGAGCTCTaGGGGTTCTCGAAGACGTGG +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYINGKEL*GFSKTW
Trigger: CCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCATT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTTGACAATTCCTCGTTaGCCTCCCACTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYILTIPR*PPTLEL
Trigger: CAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAA...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTGACAATTCCTCGTTaGCCTCCCACTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSLTIPR*PPTLEL
Trigger: CAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAA...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTATTATCTTCTGGTCCTaGCAACGTGACAGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSIIFWS*QRDSKF
Trigger: GAACTTGCTGTCACGTTGCAAGGACCAGAAGATAAT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTGGTGTTGGCATCCAATaGGGAGTACAAGAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIGVGIQ*GVQEWL
Trigger: AAGCCACTCTTGTACTCCCAATTGGATGCCAACACC...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTCCAATATTGCGGGTGTaGGCATCCAATTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIPILRV*ASNWEY
Trigger: GTACTCCCAATTGGATGCCAACACCCGCAATATTGG...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCCAATATTGCGGGTGTaGGCATCCAATTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHPILRV*ASNWEY
Trigger: GTACTCCCAATTGGATGCCAACACCCGCAATATTGG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGAGACCACAGCTTTCTTaGCAGCTGCCTCTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQRPQLS*QLPLEG
Trigger: CCCCTCAAGAGGCAGCTGCAAAGAAAGCTGTGGTCT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAGACCACAGCTTTCTTaGCAGCTGCCTCTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSRPQLS*QLPLEG
Trigger: CCCCTCAAGAGGCAGCTGCAAAGAAAGCTGTGGTCT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 5 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AATGTGTCTAATCTCAAAACCCCCGATGAAGTGCTTGTGTGGCACAGCCCAGGCGAATTCTCTGAGTTTTaGAAAAAGGTTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: NVSNLKTPDEVLVWHSPGEFSEF*KKVGCF
Trigger: AAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTC...GCCTGGGCTGTGCCACACAAGCACTTCATCGGGGGTTTTGAGATTAGACACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGCAGCACAGCCTCTCTTaGTGGCAGGATATCTGCTCC +
Preference number: 5 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQQHSLS*WQDICS
Trigger: GGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTG...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCATGAGGTATGCATCTaGACCACATGCCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSHEVCI*TTCPQC
Trigger: ACACTGTGGGCATGTGGTCAAGATGCATACCTCATG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCCATGAGGTATGCATCTaGACCACATGCCCACAGTGT +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIHEVCI*TTCPQC
Trigger: ACACTGTGGGCATGTGGTCAAGATGCATACCTCATG...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS TCA 90 bp AGTTTGGAGCTTGCAGAACTGAGACTGGATAGGGTTGTTTGCCACTaGCAGGAGGTAGCATTGCAAATCAGTGTATGTATATGGGTAGAA +
Preference number: 5 (lower is better)
Translates to: SLELAELRLDRVVCH*QEVALQISVCIWVE
Trigger: TTCTACCCATATACATACACTGATTTGCAATGCTACCTCCTGTCAGTGGCAAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000642469.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 5 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAATAGAAATATTCTGGTaGAGGTGGAGCCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPIEIFW*RWSPLN
Trigger: ATTGAGTGGGCTCCACCTCAACCAGAATATTTCTAT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTATAGAAATATTCTGGTaGAGGTGGAGCCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSIEIFW*RWSPLN
Trigger: ATTGAGTGGGCTCCACCTCAACCAGAATATTTCTAT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGTGACAGCAAGTTCCTaGACAATTCCTCGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLVTASS*TIPRLP
Trigger: AGGCAAACGAGGAATTGTCAAGGAACTTGCTGTCAC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGTGACAGCAAGTTCCTaGACAATTCCTCGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSVTASS*TIPRLP
Trigger: AGGCAAACGAGGAATTGTCAAGGAACTTGCTGTCAC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCATTATCTTCTGGTCCTaGCAACGTGACAGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFIIFWS*QRDSKF
Trigger: GAACTTGCTGTCACGTTGCAAGGACCAGAAGATAAT...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTTACTCTGACAGCTTTTaGCAGATTCCCACTCTCAAA +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSYSDSF*QIPTLK
Trigger: TTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGTA...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTACTCTGACAGCTTTTaGCAGATTCCCACTCTCAAA +
Preference number: 5 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQYSDSF*QIPTLK
Trigger: TTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGTA...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCACTCCTCCAGCCAATATaGCGGGTGTTGGCATCCAAT +
Preference number: 5 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSLLQPI*RVLASN
Trigger: ATTGGATGCCAACACCCGCAATATTGGCTGGAGGAG...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATAGACCACAGCTTTCTTaGCAGCTGCCTCTTGAGGGG +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNRPQLS*QLPLEG
Trigger: CCCCTCAAGAGGCAGCTGCAAAGAAAGCTGTGGTCT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATATTCAATTGGCCATCTaGGAGCCTGCAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNIQLAI*EPAVAS
Trigger: AGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAAT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCTTGACAATTCCTCGTTaGCCTCCCACTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSLTIPR*PPTLEL
Trigger: CAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAA...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAATTATCTTCTGGTCCTaGCAACGTGACAGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLIIFWS*QRDSKF
Trigger: GAACTTGCTGTCACGTTGCAAGGACCAGAAGATAAT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTATTATCTTCTGGTCCTaGCAACGTGACAGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSIIFWS*QRDSKF
Trigger: GAACTTGCTGTCACGTTGCAAGGACCAGAAGATAAT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTATTATCTTCTGGTCCTaGCAACGTGACAGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: TTQYTTSKCSSQSYISPIIIFWS*QRDSKF
Trigger: GAACTTGCTGTCACGTTGCAAGGACCAGAAGATAAT...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCGGTGTTGGCATCCAATaGGGAGTACAAGAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSGVGIQ*GVQEWL
Trigger: AAGCCACTCTTGTACTCCCAATTGGATGCCAACACC...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCAATATTGCGGGTGTaGGCATCCAATTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSPILRV*ASNWEY
Trigger: GTACTCCCAATTGGATGCCAACACCCGCAATATTGG...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGTCTTCAAGAAGTCTTTaGATCATGTTCCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLSSRSL*IMFLVY
Trigger: GTACACCAGGAACATGATCAAAAGACTTCTTGAAGA...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCACAGTATTTGCGATTGTaGTTATTACAGCCATACAGG +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPQYLRL*LLQPYR
Trigger: CCTGTATGGCTGTAATAACAACAATCGCAAATACTG...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGCAGTATTTGCGATTGTaGTTATTACAGCCATACAGG +
Preference number: 5 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQQYLRL*LLQPYR
Trigger: CCTGTATGGCTGTAATAACAACAATCGCAAATACTG...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AGGTCAGTGCATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGAGCCAGTATTTGCGATaGTTGTTATTACAGCCATAC +
Preference number: 5 (lower is better)
Translates to: RSVHECTTQYTTSKCSSQSQYLR*LLLQPY
Trigger: GTATGGCTGTAATAACAACAATCGCAAATACTGGCT...CTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATGCACTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAAGCCAGTATTTGCGATaGTTGTTATTACAGCCATAC +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPSQYLR*LLLQPY
Trigger: GTATGGCTGTAATAACAACAATCGCAAATACTGGCT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAGCCAGTATTTGCGATaGTTGTTATTACAGCCATAC +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSSQYLR*LLLQPY
Trigger: GTATGGCTGTAATAACAACAATCGCAAATACTGGCT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp CATCTGAGAGAGAACTGTCAGAGCCACTGGTGCTGGATTCAATGTCAGACAAAGAGTTCATGGAATTTCTaGTGGATTTCCTGTCGTAAA +
Preference number: 5 (lower is better)
Translates to: HLRENCQSHWCWIQCQTKSSWNF*WISCRK
Trigger: TTTACGACAGGAAATCCACAAGAAATTCCATGAACT...CTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TCATTTGGTCAGGATCACAAAAGTCCAGAAGGGTGTCACAGACATGATAACCTAAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 5 (lower is better)
Translates to: SFGQDHKSPEGCHRHDNLKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...TAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTATATGTGAATCTCTGTaGATGGCTTCTATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSICESL*MASICL
Trigger: CAGACAGATAGAAGCCATCAACAGAGATTCACATAT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTATTACATTTGTCACATaGTGGGAGAGAGGTGCTAAT +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSITFVT*WERGAN
Trigger: ATTAGCACCTCTCTCCCACAATGTGACAAATGTAAT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCCCAGTAAATGGCTATTACATTaGTCACATTGTGGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: DSRLQSCLIQSSVNVSPSKWLLH*SHCGRE
Trigger: CTCTCTCCCACAATGTGACAAATGTAATAGCCATTT...ACTGGGGGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAGCCATTCAACAGGCATaGAGGGTTATTCTTCCGAAC +
Preference number: 5 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSAIQQA*RVILPN
Trigger: GTTCGGAAGAATAACCCTCAATGCCTGTTGAATGGC...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATAATGGAAAAGAGCTCTaGGGGTTCTCGAAGACGTGG +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNNGKEL*GFSKTW
Trigger: CCACGTCTTCGAGAACCCCAAGAGCTCTTTTCCATT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTATAGAAATATTCTGGTaGAGGTGGAGCCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSIEIFW*RWSPLN
Trigger: ATTGAGTGGGCTCCACCTCAACCAGAATATTTCTAT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTTGACAATTCCTCGTTaGCCTCCCACTCTGGAACTG +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNLTIPR*PPTLEL
Trigger: CAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAGTGACAGCAAGTTCCTaGACAATTCCTCGTTTGCCT +
Preference number: 5 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSVTASS*TIPRLP
Trigger: AGGCAAACGAGGAATTGTCAAGGAACTTGCTGTCAC...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTACTCTGACAGCTTTTaGCAGATTCCCACTCTCAAA +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSYSDSF*QIPTLK
Trigger: TTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGTA...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGGTGTTGGCATCCAATaGGGAGTACAAGAGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNGVGIQ*GVQEWL
Trigger: AAGCCACTCTTGTACTCCCAATTGGATGCCAACACC...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATCCAATATTGCGGGTGTaGGCATCCAATTGGGAGTAC +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNPILRV*ASNWEY
Trigger: GTACTCCCAATTGGATGCCAACACCCGCAATATTGG...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTCTTCAAGAAGTCTTTaGATCATGTTCCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: MRYICAAMKCAMRTHFSFSSRSL*IMFLVY
Trigger: GTACACCAGGAACATGATCAAAAGACTTCTTGAAGA...GAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTACTGAGTGAACTTCATTaGGTCAGGATCACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLLSELH*VRITKV
Trigger: GACTTTTGTGATCCTGACCAAATGAAGTTCACTCAG...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTCTGAGTGAACTTCATTaGGTCAGGATCACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: TTQYTTSKCSSQSYISPILSELH*VRITKV
Trigger: GACTTTTGTGATCCTGACCAAATGAAGTTCACTCAG...AATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTCTGAGTGAACTTCATTaGGTCAGGATCACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSLSELH*VRITKV
Trigger: GACTTTTGTGATCCTGACCAAATGAAGTTCACTCAG...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCTGAGTGAACTTCATTaGGTCAGGATCACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHLSELH*VRITKV
Trigger: GACTTTTGTGATCCTGACCAAATGAAGTTCACTCAG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTTTCTGAGTTCATGGAATTTCTaGTGGATTTCCTGTCGTAAA +
Preference number: 5 (lower is better)
Translates to: EVYLCCHEVCHENTLQFLSSWNF*WISCRK
Trigger: TTTACGACAGGAAATCCACAAGAAATTCCATGAACT...CAGAAACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAAGTTCATGGAATTTCTaGTGGATTTCCTGTCGTAAA +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPSSWNF*WISCRK
Trigger: TTTACGACAGGAAATCCACAAGAAATTCCATGAACT...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCAGAATTCTCTGAGTTTTaGAAAAAGGTTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: AQHSIPQVNAVPSHTSPPEFSEF*KKVGCF
Trigger: AAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTC...TGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATCATCTTTTTCCCCAAGAGAGCCATTCAACAGGCATTGAGGGTTATTCTTCCGAAAGTAGCCATAATATaGGAGGTGACGGTACATAAA +
Preference number: 5 (lower is better)
Translates to: IIFFPKRAIQQALRVILPKVAII*EVTVHK
Trigger: TTTATGTACCGTCACCTCCAATATTATGGCTACTTT...CGGAAGAATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS-3UTR CAA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTCTTCAAGAAGTCTTTaGATCATGTTCCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHSSRSL*IMFLVY
Trigger: GTACACCAGGAACATGATCAAAAGACTTCTTGAAGA...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TTGGTTAAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACCAGTATTTGCGATTGTaGTTATTACAGCCATACAGG +
Preference number: 5 (lower is better)
Translates to: LVKMRYICAAMKCAMRTHQYLRL*LLQPYR
Trigger: CCTGTATGGCTGTAATAACAACAATCGCAAATACTG...GTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTTAACCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCCAGTATTTGCGATTGTaGTTATTACAGCCATACAGG +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIQYLRL*LLQPYR
Trigger: CCTGTATGGCTGTAATAACAACAATCGCAAATACTG...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCTCCCCCATTAAGCCAGTATTTGCGATaGTTGTTATTACAGCCATAC +
Preference number: 5 (lower is better)
Translates to: QHSIPQVNAVPSHTSPPLSQYLR*LLLQPY
Trigger: GTATGGCTGTAATAACAACAATCGCAAATACTGGCT...TAATGGGGGAGATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGCTCATCTGCTATGTTaGCTAGGTGAACAGGAAGAC +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNAHLLC*LGEQED
Trigger: GTCTTCCTGTTCACCTAGCAAACATAGCAGATGAGC...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAAAAGGTTGGCTGCTTTaGCAGAGTAGAAGCAAATCC +
Preference number: 5 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSKGWLL*QSRSKS
Trigger: GGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCATTTGGTCAGGATCACAAAAGTCCAGAAGGGTGTCACAGACATGATAACCTAGTGAAAAGAGAACTTTaGATCATGTTCCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SFGQDHKSPEGCHRHDNLVKREL*IMFLVY
Trigger: GTACACCAGGAACATGATCAAAAGTTCTCTTTTCAC...TAGGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528609.5
ENST00000644932.1
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAAAGTAGCCATAATATaGGAGGTGACGGTACATAAA +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSKVAII*EVTVHK
Trigger: TTTATGTACCGTCACCTCCAATATTATGGCTACTTT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCAATAGAAATATTCTGGTaGAGGTGGAGCCCACTCAAT +
Preference number: 5 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSIEIFW*RWSPLN
Trigger: ATTGAGTGGGCTCCACCTCAACCAGAATATTTCTAT...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATATTATCTTCTGGTCCTaGCAACGTGACAGCAAGTTC +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNIIFWS*QRDSKF
Trigger: GAACTTGCTGTCACGTTGCAAGGACCAGAAGATAAT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGTACTCTGACAGCTTTTaGCAGATTCCCACTCTCAAA +
Preference number: 5 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQYSDSF*QIPTLK
Trigger: TTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGTA...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp GATGAATGGATGGTAAGTAAGGCAGCCTGTTCTTATGTTCTTGGTGTAAAATCACTGAGTGAACTTCATTaGGTCAGGATCACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: DEWMVSKAACSYVLGVKSLSELH*VRITKV
Trigger: GACTTTTGTGATCCTGACCAAATGAAGTTCACTCAG...TGATTTTACACCAAGAACATAAGAACAGGCTGCCTTACTTACCATCCATTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCAGTTCATGGAATTTCTaGTGGATTTCCTGTCGTAAA +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYISSWNF*WISCRK
Trigger: TTTACGACAGGAAATCCACAAGAAATTCCATGAACT...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp AAAATGAGGTATATCTGTGCTGCCATGAAGTGTGCCATGAGAACACACTTCAGTAGTTCATGGAATTTCTaGTGGATTTCCTGTCGTAAA +
Preference number: 5 (lower is better)
Translates to: KMRYICAAMKCAMRTHFSSSWNF*WISCRK
Trigger: TTTACGACAGGAAATCCACAAGAAATTCCATGAACT...ACTGAAGTGTGTTCTCATGGCACACTTCATGGCAGCACAGATATACCTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp CATGAGTGCACAACACAGTATACCACAAGTAAATGCAGTTCCCAGTCATACATCGAATTCTCTGAGTTTTaGAAAAAGGTTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: HECTTQYTTSKCSSQSYIEFSEF*KKVGCF
Trigger: AAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTC...GATGTATGACTGGGAACTGCATTTACTTGTGGTATACTGTGTTGTGCACTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCCAGTATTTGCGATTGTaGTTATTACAGCCATACAGG +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSQYLRL*LLQPYR
Trigger: CCTGTATGGCTGTAATAACAACAATCGCAAATACTG...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATCTGAGTGAACTTCATTaGGTCAGGATCACAAAAGTC +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNLSELH*VRITKV
Trigger: GACTTTTGTGATCCTGACCAAATGAAGTTCACTCAG...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCATATGTGAATCTCTGTaGATGGCTTCTATCTGTCTG +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSICESL*MASICL
Trigger: CAGACAGATAGAAGCCATCAACAGAGATTCACATAT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAAATGGCTATTACATTaGTCACATTGTGGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSKWLLH*SHCGRE
Trigger: CTCTCTCCCACAATGTGACAAATGTAATAGCCATTT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGAAAGTAGCCATAATATaGGAGGTGACGGTACATAAA +
Preference number: 5 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQKVAII*EVTVHK
Trigger: TTTATGTACCGTCACCTCCAATATTATGGCTACTTT...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAAAGTAGCCATAATATaGGAGGTGACGGTACATAAA +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSKVAII*EVTVHK
Trigger: TTTATGTACCGTCACCTCCAATATTATGGCTACTTT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATTCTTCAAGAAGTCTTTaGATCATGTTCCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNSSRSL*IMFLVY
Trigger: GTACACCAGGAACATGATCAAAAGACTTCTTGAAGA...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATCAGTATTTGCGATTGTaGTTATTACAGCCATACAGG +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNQYLRL*LLQPYR
Trigger: CCTGTATGGCTGTAATAACAACAATCGCAAATACTG...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCAGTTCATGGAATTTCTaGTGGATTTCCTGTCGTAAA +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSSSWNF*WISCRK
Trigger: TTTACGACAGGAAATCCACAAGAAATTCCATGAACT...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp ATTGTTATTTCTATGTGGGAATACCTCATTGTGAGCAAACCTGACATACAGCAGGAATTCTCTGAGTTTTaGAAAAAGGTTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: IVISMWEYLIVSKPDIQQEFSEF*KKVGCF
Trigger: AAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTC...CTGCTGTATGTCAGGTTTGCTCACAATGAGGTATTCCCACATAGAAATAACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528609.5
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS-3UTR CAA 90 bp ATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATGTCTCCGAATTCTCTGAGTTTTaGAAAAAGGTTGGCTGCTTT +
Preference number: 5 (lower is better)
Translates to: IFDSRLQSCLIQSSVNVSEFSEF*KKVGCF
Trigger: AAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTC...GGAGACATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATATTACATTTGTCACATaGTGGGAGAGAGGTGCTAAT +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNITFVT*WERGAN
Trigger: ATTAGCACCTCTCTCCCACAATGTGACAAATGTAAT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS-3UTR CAA 90 bp TCACCAATATTTGATTCCAGACTTCAGTCATGTCTAATCCAAAGCAGTGTCAATAAAGTAGCCATAATATaGGAGGTGACGGTACATAAA +
Preference number: 5 (lower is better)
Translates to: SPIFDSRLQSCLIQSSVNKVAII*EVTVHK
Trigger: TTTATGTACCGTCACCTCCAATATTATGGCTACTTT...ATTGACACTGCTTTGGATTAGACATGACTGAAGTCTGGAATCAAATATTGGTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS GCA 72 bp TTCGCGCCCCGGCCCGTCCCAAGCAGCACGGATGGCTaGGGCAGAGAAGCTCCAGCGAGGCAGGCGGCCACC +
Preference number: 6 (lower is better)
Translates to: FAPRPVPSSTDG*GREAPARQAAT
Trigger: GGTGGCCGCCTGCCTCGCTGGAGCTTCTCTGCCGCAGCCATCCGTGCTGCTTGGGACGGGCCGGGGCGCGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000525123.6
ENST00000528244.5
ENST00000529154.5
ENST00000529712.5
ENST00000530969.1
ENST00000531835.1
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643830.1
ENST00000643952.1
ENST00000645178.1
ENST00000645431.2
ENST00000647499.1
CDS GCA 72 bp AGGCCAAGCAGTGTGCGGGCAAGGGGACAAACTCGCTaGACCCGCCCGCCACCGCCTTCTGTGAGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: RPSSVRARGQTR*TRPPPPSVRAR
Trigger: CCGGGCCCTCACAGAAGGCGGTGGCGGGCGGGTGCAGCGAGTTTGTCCCCTTGCCCGCACACTGCTTGGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000525123.6
ENST00000528244.5
ENST00000529154.5
ENST00000530969.1
ENST00000531835.1
ENST00000532595.5
ENST00000642912.1
ENST00000643830.1
ENST00000643952.1
ENST00000645178.1
ENST00000645431.2
ENST00000647499.1
CDS GCA 72 bp CATCCAGTCGCAAACCCAGGAGGGCAGAGCGATGGATaGGACCGCCTTCGCGCCCCGGCCCGTCCCAAGCAG +
Preference number: 6 (lower is better)
Translates to: HPVANPGGQSDG*DRLRAPARPKQ
Trigger: CTGCTTGGGACGGGCCGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCTGGGTTTGCGACTGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS GCA 72 bp GCGGCCACCGCACTTAAGTACAGAGGCCAAGCAGTGTaGGGGCAAGGGGACAAACTCGCTGCACCCGCCCGC +
Preference number: 6 (lower is better)
Translates to: AATALKYRGQAV*GQGDKLAAPAR
Trigger: GCGGGCGGGTGCAGCGAGTTTGTCCCCTTGCCCGCACACTGCTTGGCCTCTGTACTTAAGTGCGGTGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000525123.6
ENST00000528244.5
ENST00000529154.5
ENST00000529712.5
ENST00000530969.1
ENST00000531835.1
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643830.1
ENST00000643952.1
ENST00000645178.1
ENST00000645431.2
ENST00000647499.1
CDS CCA 72 bp GAAGGAGAGCAGAAACTTCCCAGGAGGGCAGAGCGATaGATGCGACCGCCTTCGCGCCCCGGCCCGTCCCAA +
Preference number: 6 (lower is better)
Translates to: EGEQKLPRRAER*MRPPSRPGPSQ
Trigger: TTGGGACGGGCCGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCTGGGAAGTTTCTGCTCTCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000529154.5
ENST00000529712.5
ENST00000530969.1
ENST00000642469.1
ENST00000643830.1
ENST00000647499.1
CDS CCA 72 bp TTAGCATCCAGTCGCAAACCCAGGAGGGCAGAGCGATaGATGCGACCGCCTTCGCGCCCCGGCCCGTCCCAA +
Preference number: 6 (lower is better)
Translates to: LASSRKPRRAER*MRPPSRPGPSQ
Trigger: TTGGGACGGGCCGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCTGGGTTTGCGACTGGATGCTAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528244.5
ENST00000643952.1
CDS GCA 72 bp GATTACACAAGAGAAGCAGGAGGGCAGAGCGATGGATaGGACCGCCTTCGCGCCCCGGCCCGTCCCAAGCAG +
Preference number: 6 (lower is better)
Translates to: DYTREAGGQSDG*DRLRAPARPKQ
Trigger: CTGCTTGGGACGGGCCGGGGCGCGAAGGCGGTCGCATCCATCGCTCTGCCCTCCTGCTTCTCTTGTGTAATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000525123.6
ENST00000531835.1
ENST00000532595.5
ENST00000642912.1
ENST00000645178.1
ENST00000645431.2
CDS GCA 72 bp GGGTATGGGAGCACGCGACGAAGTCGTCTCGGTAGGTaGCGATGGAAAAAGGTCAGGGGGTTGGGAAAGTGG +
Preference number: 6 (lower is better)
Translates to: GYGSTRRSRLGR*RWKKVRGLGKW
Trigger: CCACTTTCCCAACCCCCTGACCTTTTTCCATCGGCACCTACCGAGACGACTTCGTCGCGTGCTCCCATACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000529154.5
ENST00000529712.5
ENST00000642469.1
ENST00000643830.1
CDS TCA 72 bp CTGAGGCCGCGCCACTGCATCCAGCCCAGGCAAGAGTaGAAGTCTCTGTTGATGGCTTCTATCTGTCTGTGC +
Preference number: 6 (lower is better)
Translates to: LRPRHCIQPRQE*KSLLMASICLC
Trigger: GCACAGACAGATAGAAGCCATCAACAGAGACTTTCACTCTTGCCTGGGCTGGATGCAGTGGCGCGGCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000644455.1
ENST00000645431.2
CDS GCA 72 bp GGAACTCAGAAAATGATAGCCAAAGGCTGGGAGGGTTaGTTGAGCCTGGGATGTGGAGGCCACTGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: GTQKMIAKGWEG*LSLGCGGHCPP
Trigger: TGGAGGGCAGTGGCCTCCACATCCCAGGCTCAAGCAACCCTCCCAGCCTTTGGCTATCATTTTCTGAGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS CAA 72 bp TGGAACTCAGAAAATGATAGCCAAAGGCTGGGAGGGTaGCTTGAGCCTGGGATGTGGAGGCCACTGCCCTCC +
Preference number: 6 (lower is better)
Translates to: WNSENDSQRLGG*LEPGMWRPLPS
Trigger: GGAGGGCAGTGGCCTCCACATCCCAGGCTCAAGCAACCCTCCCAGCCTTTGGCTATCATTTTCTGAGTTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528632.5
ENST00000645934.1
CDS TCA 72 bp CAGTCGCAAACCCTGCCCAATTTCCAAATAGGCAGCTaGTTACACAAGAGAAGCAGGAGGGCAGAGCGATGG +
Preference number: 6 (lower is better)
Translates to: QSQTLPNFQIGS*LHKRSRRAERW
Trigger: CCATCGCTCTGCCCTCCTGCTTCTCTTGTGTAATCAGCTGCCTATTTGGAAATTGGGCAGGGTTTGCGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000525123.6
ENST00000531835.1
ENST00000532595.5
ENST00000642912.1
ENST00000645178.1
ENST00000645431.2
CDS TCA 72 bp AAGTGTCCTGGTCATATGGAAACTGAATGGTCCACGTaGGACAGTAGAAGGGCTGCTGCCCATCATCCGTGT +
Preference number: 6 (lower is better)
Translates to: KCPGHMETEWST*DSRRAAAHHPC
Trigger: ACACGGATGATGGGCAGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGTTTCCATATGACCAGGACACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000642469.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS CCA 72 bp GAAGATGGAAAGAGGAAGGGGAGAGAAGGCATGAGATaGGGCAGAAGAGAGGAAGAGCTCTTGGGAAAGAAA +
Preference number: 6 (lower is better)
Translates to: EDGKRKGREGMR*GRREEELLGKK
Trigger: TTTCTTTCCCAAGAGCTCTTCCTCTCTTCTGCCCCATCTCATGCCTTCTCTCCCCTTCCTCTTTCCATCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532835.1
ENST00000646211.1
CDS CAA 72 bp TTATCTTCTGGTCCTTGCAACGTGACAGCAAGTTCCTaGACAATTCCTCGTTTGCCTCCCACTCTGGAACTG +
Preference number: 6 (lower is better)
Translates to: LSSGPCNVTASS*TIPRLPPTLEL
Trigger: CAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAAGGAACTTGCTGTCACGTTGCAAGGACCAGAAGATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS CAA 72 bp TCTCCTCCAGCCAATATTGCGGGTGTTGGCATCCAATaGGGAGTACAAGAGTGGCTTCATCCCTACAGTATA +
Preference number: 6 (lower is better)
Translates to: SPPANIAGVGIQ*GVQEWLHPYSI
Trigger: TATACTGTAGGGATGAAGCCACTCTTGTACTCCCAATTGGATGCCAACACCCGCAATATTGGCTGGAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS CAA 72 bp GCCTCTCTGAGCTTTGTATTAAGTGATGCTGTCTACTaGACAGAGGTGACCCGCAGATCAATGGGGAAAGGA +
Preference number: 6 (lower is better)
Translates to: ASLSFVLSDAVY*TEVTRRSMGKG
Trigger: TCCTTTCCCCATTGATCTGCGGGTCACCTCTGTCAAGTAGACAGCATCACTTAATACAAAGCTCAGAGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531835.1
ENST00000645178.1
CDS CCA 72 bp GTTTTCCTTGATGACCTCACATTCAATTGGCCATCTTaGAGCCTGCAGTGGCCTCTTGGTAGACAAAATGGA +
Preference number: 6 (lower is better)
Translates to: VFLDDLTFNWPS*SLQWPLGRQNG
Trigger: TCCATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAATGTGAGGTCATCAAGGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000526331.5
ENST00000528244.5
ENST00000529712.5
ENST00000530577.5
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
ENST00000645554.1
ENST00000646890.1
CDS CAA 90 bp ATTTCCTTCTCTCCTCCAGCCAATATTGCGGGTGTTGGCATCCAATaGGGAGTACAAGAGTGGCTTCATCCCTACAGTATAAAGACTCTT +
Preference number: 6 (lower is better)
Translates to: ISFSPPANIAGVGIQ*GVQEWLHPYSIKTL
Trigger: AAGAGTCTTTATACTGTAGGGATGAAGCCACTCTTGTACTCCCAATTGGATGCCAACACCCGCAATATTGGCTGGAGGAGAGAAGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS CAA 90 bp TACTTGATTTCATTTCCTTCTCTCCTCCAGCCAATATTGCGGGTGTaGGCATCCAATTGGGAGTACAAGAGTGGCTTCATCCCTACAGTA +
Preference number: 6 (lower is better)
Translates to: YLISFPSLLQPILRV*ASNWEYKSGFIPTV
Trigger: TACTGTAGGGATGAAGCCACTCTTGTACTCCCAATTGGATGCCAACACCCGCAATATTGGCTGGAGGAGAGAAGGAAATGAAATCAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS TCA 72 bp AGTTTGGTAAACTGCCTCTCTGAGCTTTGTATTAAGTaGTGCTGTCTACTTGACAGAGGTGACCCGCAGATC +
Preference number: 6 (lower is better)
Translates to: SLVNCLSELCIK*CCLLDRGDPQI
Trigger: GATCTGCGGGTCACCTCTGTCAAGTAGACAGCATCACTTAATACAAAGCTCAGAGAGGCAGTTTACCAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531835.1
ENST00000645178.1
CDS CCA 72 bp ATTGCGGGTGTTGGCATCCAATTGGGAGTACAAGAGTaGCTTCATCCCTACAGTATAAAGACTCTTGGGTTT +
Preference number: 6 (lower is better)
Translates to: IAGVGIQLGVQE*LHPYSIKTLGF
Trigger: AAACCCAAGAGTCTTTATACTGTAGGGATGAAGCCACTCTTGTACTCCCAATTGGATGCCAACACCCGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000532595.5
ENST00000642469.1
ENST00000642912.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS TCA 72 bp CTTGCAGAACTGAGACTGGATAGGGTTGTTTGCCACTaGCAGGAGGTAGCATTGCAAATCAGTGTATGTATA +
Preference number: 6 (lower is better)
Translates to: LAELRLDRVVCH*QEVALQISVCI
Trigger: TATACATACACTGATTTGCAATGCTACCTCCTGTCAGTGGCAAACAACCCTATCCAGTCTCAGTTCTGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000642469.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2
CDS CCA 72 bp CTTGAAGACAAAAATATCTCTGAGGAGCTGGGCATCTaGGGAGTTGCTAAGGATGAAGTCCAAAAAGCCTTT +
Preference number: 6 (lower is better)
Translates to: LEDKNISEELGI*GVAKDEVQKAF
Trigger: AAAGGCTTTTTGGACTTCATCCTTAGCAACTCCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000528609.5
ENST00000529712.5
ENST00000642469.1
ENST00000643952.1
ENST00000644455.1
ENST00000644932.1
ENST00000645431.2
CDS CAA 90 bp TCAATGGGGAAAGGAAGTACTTTTCACTTTAAAGTAGCCATAATATaGGAGGTGACGGTACATAAAGTCTTCATAAGGATCAGGAATAGT +
Preference number: 6 (lower is better)
Translates to: SMGKGSTFHFKVAII*EVTVHKVFIRIRNS
Trigger: ACTATTCCTGATCCTTATGAAGACTTTATGTACCGTCACCTCCAATATTATGGCTACTTTAAAGTGAAAAGTACTTCCTTTCCCCATTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000531835.1
ENST00000645178.1
CDS GCA 72 bp ACATTAAAGGAAAGACTCGTTCATGAAGCCAGTATTTaGGATTGTTGTTATTACAGCCATACAGGAAGATAT +
Preference number: 6 (lower is better)
Translates to: TLKERLVHEASI*DCCYYSHTGRY
Trigger: ATATCTTCCTGTATGGCTGTAATAACAACAATCGCAAATACTGGCTTCATGAACGAGTCTTTCCTTTAATGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000357610.7
ENST00000525123.6
ENST00000528244.5
ENST00000529712.5
ENST00000642469.1
ENST00000643952.1
ENST00000644455.1
ENST00000645431.2