RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for AGAP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000133612

Ensembl transcript IDs: ENST00000335367.7, ENST00000397238.7, ENST00000461065.1, ENST00000463179.1, ENST00000463381.5, ENST00000467250.1, ENST00000467724.5, ENST00000468796.1, ENST00000469901.5, ENST00000473312.5, ENST00000473633.1, ENST00000475145.1, ENST00000476375.5, ENST00000478320.1, ENST00000479901.5, ENST00000480106.1, ENST00000483971.1, ENST00000485904.5, ENST00000486946.1, ENST00000490097.5, ENST00000490839.1, ENST00000492234.5, ENST00000494808.1, ENST00000498559.5, ENST00000622464.4

Found 887 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCGCTGGCCAGCGCCGGGCGTGGGGCCGAGCTGCCTTCTTCTCCATaGAGCGAGCCTGCAGCGTCCGGCCGGGCCTGGTCCCCGGCAGCC +
Preference number: 1 (lower is better)
Translates to: ALASAGRGAELPSSP*SEPAASGRAWSPAA
Trigger: GGCTGCCGGGGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAGCTCGGCCCCACGCCCGGCGCTGGCCAGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR GCA 90 bp CTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGGCCGAGCTaGCTTCTTCTCCATGCAGCGAGCCTGCAGCGTCCGGCCGGGCCT +
Preference number: 1 (lower is better)
Translates to: LWASSRWPAPGVGPS*LLLHAASLQRPAGP
Trigger: AGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAGCTCGGCCCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR TCA 90 bp TCCCGTGGGTCTCTGGAGTGGGGAGCTCGGCGGCCGCTTCTCATCTaGGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGG +
Preference number: 1 (lower is better)
Translates to: SRGSLEWGARRPLLI*EQSQGPARLRPRTG
Trigger: CCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCGCCGAGCTCCCCACTCCAGAGACCCACGGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR CCA 90 bp CTGCCTTCTTCTCCATGCAGCGAGCCTGCAGCGTCCGGCCGGGCCTaGTCCCCGGCAGCCCCCAGCGCGGGCTCCGGCGCTCCTAGCCTT +
Preference number: 1 (lower is better)
Translates to: LPSSPCSEPAASGRA*SPAAPSAGSGAPSL
Trigger: AAGGCTAGGAGCGCCGGAGCCCGCGCTGGGGGCTGCCGGGGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR CCA 90 bp GAGCGGGCAGATGGCCCGTCTGCGGCACAGACACCACACGGCACGTaGCACCGAGCGCGTCGGCGTGGCCCAAGGGGCACAGTGGATGGA +
Preference number: 1 (lower is better)
Translates to: ERADGPSAAQTPHGT*HRARRRGPRGTVDG
Trigger: TCCATCCACTGTGCCCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCATCTGCCCGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR TCA 90 bp GTCGGGAGCACAGGGCGCGACAACCGGGAGCGCAAAGTCCACAAGTaGGCGGGCAGATGGCCCGTCTGCGGCACAGACACCACACGGCAC +
Preference number: 1 (lower is better)
Translates to: VGSTGRDNRERKVHK*AGRWPVCGTDTTRH
Trigger: GTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGGTTGTCGCGCCCTGTGCTCCCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR GCA 90 bp GGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGTCTTCTAATTTGGAAGGAGTTGGAA +
Preference number: 1 (lower is better)
Translates to: GPGPPPAPHRGHVQR*CVSPTGLLIWKELE
Trigger: TTCCAACTCCTTCCAAATTAGAAGACCAGTTGGTGACACACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR TCA 90 bp CCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGATGAAGGCGTGTaGGGGGCTGGCACTAGGAGGCAGGGATCTGGAGGAGGGAGAGGT +
Preference number: 1 (lower is better)
Translates to: PQLGAVLFLFQDEGV*GAGTRRQGSGGGRG
Trigger: ACCTCTCCCTCCTCCAGATCCCTGCCTCCTAGTGCCAGCCCCTCACACGCCTTCATCCTGAAACAGGAAGAGGACGGCACCAAGTTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR TCA 90 bp GGGTTTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTaGGCCGGGCCCGCCCCTTACAAAAGAGCAAGGACAGAGAGGCCG +
Preference number: 1 (lower is better)
Translates to: GFILTHGTIQSSTGH*AGPAPYKRARTERP
Trigger: CGGCCTCTCTGTCCTTGCTCTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp TTGGACTCCCCCGCCCCTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGGTTCCCGTGGGTCTCTaGAGTGGGGAGCTCGGCGGC +
Preference number: 2 (lower is better)
Translates to: LDSPAPLGLVALASAGRGVPVGL*SGELGG
Trigger: GCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAAC...CCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGTCCAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGGGCCAGCGCCGGGCGTaGGGCCGAGCTGCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: WPVCGTDTTRHVAPSASAGQRRA*GRAAFF
Trigger: GAAGAAGGCAGCTCGGCCCCACGCCCGGCGCTGGCC...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGGCCAGCGCCGGGCGTaGGGCCGAGCTGCCTTCTTC +
Preference number: 2 (lower is better)
Translates to: ARLRHRHHTARGTERVGVGQRRA*GRAAFF
Trigger: GAAGAAGGCAGCTCGGCCCCACGCCCGGCGCTGGCC...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp CGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAAGGGACTCCCCCGCCCCTCTaGGCCTCGTCGCGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: RHRHHTARGTERVGVAQGTPPPL*ASSRWP
Trigger: TGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGT...CCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTCCATGCAGCGAGCCTaGAGCGTCCGGCCGGGCCTG +
Preference number: 2 (lower is better)
Translates to: WPVCGTDTTRHVAPSASASMQRA*SVRPGL
Trigger: CAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGA...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR TCA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGCGGCCGCTTCTCATCTaGGAGCAGTCCCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: ARLRHRHHTARGTERVGVRPLLI*EQSQGP
Trigger: CGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCG...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR TCA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGCGGCCGCTTCTCATCTaGGAGCAGTCCCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: WPVCGTDTTRHVAPSASARPLLI*EQSQGP
Trigger: CGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCG...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp AGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCGTGGGGCCGAGCTaGCTTCTTCTCCATGCAGCG +
Preference number: 2 (lower is better)
Translates to: RGQGKRGGGGGFRSRSRNGVGPS*LLLHAA
Trigger: CGCTGCATGGAGAAGAAGGCAGCTCGGCCCCACGCC...GTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCCGTGGGTCTCTGGAGTaGGGAGCTCGGCGGCCGCTT +
Preference number: 2 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPRGSLE*GARRPL
Trigger: AAGCGGCCGCCGAGCTCCCCACTCCAGAGACCCACG...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp AGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCAGAGGTCCATGTTCCCGTGGGTCTCTaGAGTGGGGAGCTCGGCGGC +
Preference number: 2 (lower is better)
Translates to: SAAAAAASGAGAGTAEVHVPVGL*SGELGG
Trigger: GCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAAC...ATGGACCTCTGCCGTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp CGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAAGGGCTGCCTTCTTCTCCATaGAGCGAGCCTGCAGCGTCC +
Preference number: 2 (lower is better)
Translates to: RHRHHTARGTERVGVAQGLPSSP*SEPAAS
Trigger: GGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAG...CCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp CGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCTGCCTTCTTCTCCATaGAGCGAGCCTGCAGCGTCC +
Preference number: 2 (lower is better)
Translates to: RLRHRHHTARGTERVGVALPSSP*SEPAAS
Trigger: GGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAG...GGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGACCGAGCGCGTCGGCGTaGCCCAAGGGGCACAGTGGA +
Preference number: 2 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRPSASA*PKGHSG
Trigger: TCCACTGTGCCCCTTGGGCCACGCCGACGCGCTCGG...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp AGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGT +
Preference number: 2 (lower is better)
Translates to: RGQGKRGGGGGFRSRSRNGHVQR*CVSPTG
Trigger: ACCAGTTGGTGACACACAGCACCTCTGGACATGCCC...GTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp GAGGCCAGAAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAGTTCCCGTGGGTCTCTaGAGTGGGGAGCTCGGCGGC +
Preference number: 2 (lower is better)
Translates to: EARRGPAPCQAPGAESTRVPVGL*SGELGG
Trigger: GCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAAC...TCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTTCTGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACTCCCCCGCCCCTCTaGGCCTCGTCGCGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLTPPPL*ASSRWP
Trigger: TGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGT...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp CCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCACCCTGTCAAGCTCCTaGGGCAGAGTCCACCCGAAT +
Preference number: 2 (lower is better)
Translates to: PSAAQTPHGTWHRARRRGTLSSS*GRVHPN
Trigger: ATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGT...GCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGCCGAGCGCGTCGGCGTaGCCCAAGGGGCACAGTGGA +
Preference number: 2 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKPSASA*PKGHSG
Trigger: TCCACTGTGCCCCTTGGGCCACGCCGACGCGCTCGG...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTCGAGGAGGTGGACGGTaGGGCTGCTGGTCGGGAGCA +
Preference number: 2 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLRGGGR*GCWSGA
Trigger: TGCTCCCGACCAGCAGCCCCACCGTCCACCTCCTCG...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR TCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCGGCCGCTTCTCATCTaGGAGCAGTCCCAGGGCCCG +
Preference number: 2 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPRPLLI*EQSQGP
Trigger: CGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCG...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp GAGGCCAGAAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGT +
Preference number: 2 (lower is better)
Translates to: EARRGPAPCQAPGAESTRGHVQR*CVSPTG
Trigger: ACCAGTTGGTGACACACAGCACCTCTGGACATGCCC...TCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTTCTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGCTGCCTTCTTCTCCATaGAGCGAGCCTGCAGCGTCC +
Preference number: 2 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKLPSSP*SEPAAS
Trigger: GGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAG...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CCA 90 bp GAGGCCAGAAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGATTACAAAGGTTCCCGTaGGTCTCTGGAGTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: EARRGPAPCQAPGAESTRLQRFP*VSGVGS
Trigger: GCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAA...TCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTTCTGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp GCAGAGTCCACCCGAATGCGGATCCTAGGAAATAGGGGGAGGCCAAAAAGAGGGGGCGTGGGGCCGAGCTaGCTTCTTCTCCATGCAGCG +
Preference number: 2 (lower is better)
Translates to: AESTRMRILGNRGRPKRGGVGPS*LLLHAA
Trigger: CGCTGCATGGAGAAGAAGGCAGCTCGGCCCCACGCC...CCCTCTTTTTGGCCTCCCCCTATTTCCTAGGATCCGCATTCGGGTGGACTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGGGCAGATGGCCCGTCTaGGGCACAGACACCACACGG +
Preference number: 2 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPGRWPV*GTDTTR
Trigger: CCGTGTGGTGTCTGTGCCGCAGACGGGCCATCTGCC...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp CCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCCTAGGAGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGT +
Preference number: 2 (lower is better)
Translates to: PAPCQAPGAESTRMRILGGHVQR*CVSPTG
Trigger: ACCAGTTGGTGACACACAGCACCTCTGGACATGCCC...TCCTAGGATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGTGTCTGTTCCCACAGTaGCTGCAGGGAGGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQCLFPQ*LQGGGS
Trigger: AGACCCTCCTCCCTGCAGGCACTGTGGGAACAGACA...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR CAA 90 bp GGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCAACTaGGTGCCGTCCTCTTCCTGTTTCAGGATGAAGGCGTGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: GLTDHPSSLSSSTPN*VPSSSCFRMKACEG
Trigger: CCCCTCACACGCCTTCATCCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR TCA 90 bp GAGGGAGGAACGAGGCAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGGGTGGGTGGAAAGCATaGATTTTCCCCTCGGCAGTG +
Preference number: 2 (lower is better)
Translates to: EGGTRQRGEAQEKMAKPLGGWKA*IFPSAV
Trigger: CACTGCCGAGGGGAAAATTCATGCTTTCCACCCACC...CAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTTCCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR-3UTR GCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAAGGAGGGAGAGGTCCTaGTCCCCTCTCCTCACAGGC +
Preference number: 2 (lower is better)
Translates to: CTKFTWDSQITPRLFHPARRERS*SPLLTG
Trigger: GCCTGTGAGGAGAGGGGAGCAGGACCTCTCCCTCCT...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR GCA 90 bp CCTTTGTTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGT +
Preference number: 2 (lower is better)
Translates to: PLLNQSQRWVESMNFPLGGHVQR*CVSPTG
Trigger: ACCAGTTGGTGACACACAGCACCTCTGGACATGCCC...GCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAACAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR CAA 90 bp GGAACGAGGCAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTaGTTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCC +
Preference number: 2 (lower is better)
Translates to: GTRQRGEAQEKMAKP*LNQSQRWVESMNFP
Trigger: GGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAACAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCATGTCTGTTCCCACAGTaGCTGCAGGGAGGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPCLFPQ*LQGGGS
Trigger: AGACCCTCCTCCCTGCAGGCACTGTGGGAACAGACA...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCTGTCCCTTTTCAATaGCACCTTAGGGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAPVPFQ*HLRAEG
Trigger: GCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR GCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACTCATCCCTCTCTGCTaGAGCTCAAATCCCCAACTC +
Preference number: 2 (lower is better)
Translates to: CTKFTWDSQITPRLFHPALIPLC*SSNPQL
Trigger: GAGTTGGGGATTTGAGCTGCAGCAGAGAGGGATGAG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTaGCGTCCTCTTCCTGTTTCA +
Preference number: 2 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPAPPTW*RPLPVS
Trigger: TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGC...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACCTGTCCCTTTTCAATaGCACCTTAGGGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPPVPFQ*HLRAEG
Trigger: GCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCCAGCACCCCCAACTTaGTGCCGTCCTCTTCCTGTT +
Preference number: 2 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFPAPPT*CRPLPV
Trigger: AACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGG...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR CAA 90 bp GTCACCAACTGGTCTTCTAATTTGGAAGGAGTTGGAAAGGCCTTTTaGTTGATGAAAAGTTGGAAACAGTGGCACATATCTGAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: VTNWSSNLEGVGKAF*LMKSWKQWHISERE
Trigger: CTCCCTCTCAGATATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTCCAAATTAGAAGACCAGTTGGTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR GCA 72 bp AGCGCCGGGCGTGGGGCCGAGCTGCCTTCTTCTCCATaGAGCGAGCCTGCAGCGTCCGGCCGGGCCTGGTCC +
Preference number: 3 (lower is better)
Translates to: SAGRGAELPSSP*SEPAASGRAWS
Trigger: GGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAGCTCGGCCCCACGCCCGGCGCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR TCA 72 bp TCTCTGGAGTGGGGAGCTCGGCGGCCGCTTCTCATCTaGGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCC +
Preference number: 3 (lower is better)
Translates to: SLEWGARRPLLI*EQSQGPARLRP
Trigger: GGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCGCCGAGCTCCCCACTCCAGAGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR CCA 72 bp GATGGCCCGTCTGCGGCACAGACACCACACGGCACGTaGCACCGAGCGCGTCGGCGTGGCCCAAGGGGCACA +
Preference number: 3 (lower is better)
Translates to: DGPSAAQTPHGT*HRARRRGPRGT
Trigger: TGTGCCCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCATC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR CCA 72 bp GACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTaGCCCAAGGGGCACAGTGGATGGACAGAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: DTTRHVAPSASA*PKGHSGWTERG
Trigger: TCCTCTCTCTGTCCATCCACTGTGCCCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR TCA 72 bp ACAGGGCGCGACAACCGGGAGCGCAAAGTCCACAAGTaGGCGGGCAGATGGCCCGTCTGCGGCACAGACACC +
Preference number: 3 (lower is better)
Translates to: TGRDNRERKVHK*AGRWPVCGTDT
Trigger: GGTGTCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGGTTGTCGCGCCCTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
3UTR-3UTR CAA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTGGAAAGGCCTTTTTGTaGATGAAAAGTTGGAAACAG +
Preference number: 3 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCGKAFL*MKSWKQ
Trigger: CTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCC...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR GCA 72 bp CCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGTCTTCTAATTTGGAAG +
Preference number: 3 (lower is better)
Translates to: PPPAPHRGHVQR*CVSPTGLLIWK
Trigger: CTTCCAAATTAGAAGACCAGTTGGTGACACACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATTCCTCCCTAATTTCCTaGGCTTCGTCCTCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNSSLIS*ASSSQH
Trigger: ATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGA...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR CAA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCATCCTCCCTAATTTCCTaGGCTTCGTCCTCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSSSLIS*ASSSQH
Trigger: ATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGA...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR CAA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTCCTCCCTAATTTCCTaGGCTTCGTCCTCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLSSLIS*ASSSQH
Trigger: ATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCAATCCCCAACTCTCCTaGATCCCTTTGACTCTCCTC +
Preference number: 3 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPNPQLS*IPLTLL
Trigger: GAGGAGAGTCAAAGGGATCAAGGAGAGTTGGGGATT...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR CCA 72 bp AAGATGGCTAAGCCTTTGTTAAACCAATCACAGCGGTaGGTGGAAAGCATGAATTTTCCCCTCGGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: KMAKPLLNQSQR*VESMNFPLGSG
Trigger: CCCACTGCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAACAAAGGCTTAGCCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTTCCAGCACCCCCAACTaGGTGCCGTCCTCTTCCTGT +
Preference number: 3 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFSSTPN*VPSSSC
Trigger: ACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGA...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTTCCTCCCTAATTTCCTaGGCTTCGTCCTCTCAGCAT +
Preference number: 3 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFSSLIS*ASSSQH
Trigger: ATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGA...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
3UTR CCA 72 bp GAAGGAGTTGGAAAGGCCTTTTTGTTGATGAAAAGTTaGAAACAGTGGCACATATCTGAGAGGGAGGAACGA +
Preference number: 3 (lower is better)
Translates to: EGVGKAFLLMKS*KQWHISEREER
Trigger: TCGTTCCTCCCTCTCAGATATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTGAGTCGCAGACGCTGTaGGCGCGGCGGCAAGCGGCG +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCESQTL*ARRQAA
Trigger: CGCCGCTTGCCGCCGCGCCCACAGCGTCTGCGACTC...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR TCA 90 bp TTGGACTCCCCCGCCCCTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGGGGCGAGTTGGGCAGTaGCTTGCAGGGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: LDSPAPLGLVALASAGRGGRVGQ*LAGPDG
Trigger: GCCATCGGGCCCTGCAAGTCACTGCCCAACTCGCCC...CCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGTCCAA
76% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGACCGGCCGAGGCGCCGTaGAGGTCCAGCGAGTCGCAG +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGPAEAP*RSSESQ
Trigger: CTGCGACTCGCTGGACCTGCACGGCGCCTCGGCCGG...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR GCA 90 bp AGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACCTGGCCAGCGCTGGCTaGTCCACAACGCCGCGCCGC +
Preference number: 4 (lower is better)
Translates to: RGQGKRGGGGGFRSRSRNLASAG*STTPRR
Trigger: GCGGCGCGGCGTTGTGGAGCAGCCAGCGCTGGCCAG...GTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR GCA 90 bp TCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTTCCATGCAGCGAGCCTaGAGCGTCCGGCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: SQGPARLRPRTGGMSRGASMQRA*SVRPGL
Trigger: CAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGA...AGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTGGTGGACGGTGGGGCTaGTGGTCGGGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCGGRWG*WSGAQG
Trigger: GCCCTGTGCTCCCGACCAGCAGCCCCACCGTCCACC...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCACCAGGAAAGTCATGCTaGCCGGCCGGGGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPPGKSC*PAGAAE
Trigger: CTCCGCGGCCCCGGCCGGCCAGCATGACTTTCCTGG...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR CCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACTCCCCCGCCCCTCTaGGCCTCGTCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGTPPPL*ASSRWP
Trigger: TGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGT...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TTGGACTCCCCCGCCCCTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGCGAGGAGGTGGACGGTaGGGCTGCTGGTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: LDSPAPLGLVALASAGRGRGGGR*GCWSGA
Trigger: TGCTCCCGACCAGCAGCCCCACCGTCCACCTCCTCG...CCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGTCCAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp CGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAAGGGGGCGGAAGCGGCTCGTaGGCAGCCTCCAGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RHRHHTARGTERVGVAQGGGSGS*AASRGR
Trigger: CCGGCCTCTGGAGGCTGCTCACGAGCCGCTTCCGCC...CCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR TCA 90 bp GTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCGGGGATTCGCAGCGCTaGTGGCATCCTGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: VPGPGPPPAPHRGHVQRCGDSQR*WHPACP
Trigger: TGGGCACGCAGGATGCCATCAGCGCTGCGAATCCCC...GCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGGGCGAGTTGGGCAGTaGCTTGCAGGGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPGRVGQ*LAGPDG
Trigger: GCCATCGGGCCCTGCAAGTCACTGCCCAACTCGCCC...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp TCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTCGGCCGCTTCTCATCTaGGAGCAGTCCCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SQGPARLRPRTGGMSRGARPLLI*EQSQGP
Trigger: CGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCG...AGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCACGGCCGCTTCTCATCTaGGAGCAGTCCCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPRPLLI*EQSQGP
Trigger: CGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCG...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTCGGCCGCTTCTCATCTaGGAGCAGTCCCAGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCRPLLI*EQSQGP
Trigger: CGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCG...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGATCCATGCAGCGAGCCTaGAGCGTCCGGCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGSMQRA*SVRPGL
Trigger: CAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGA...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGTGCTGCTGCGGGCTCTaGCCCCCGCCCGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: ARLRHRHHTARGTERVGVCCCGL*PPPAWK
Trigger: CTTCCAGGCGGGCGGGGGGCAGAGCCCGCAGCAGCA...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTTGCTGCTGCGGGCTCTaGCCCCCGCCCGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: GPSAAQTPHGTWHRARRRCCCGL*PPPAWK
Trigger: CTTCCAGGCGGGCGGGGGGCAGAGCCCGCAGCAGCA...ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGAGCCGCCAGGCTCTaGTGCTGCTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RGQGKRGGGGGFRSRSRNGAARL*CCCGLC
Trigger: GCAGAGCCCGCAGCAGCAGCAGAGCCTGGCGGCTCC...GTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCGCAGGTCGCGGCGGCTaGGGAAGGCGCCTAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPAGRGG*GRRLGS
Trigger: GCTCCCTAGGCGCCTTCCCCAGCCGCCGCGACCTGC...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR CCA 90 bp CGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCTGTGCACGGCCGGGATaGAGGCGGCGGACACGGCCG +
Preference number: 4 (lower is better)
Translates to: RLRHRHHTARGTERVGVACARPG*RRRTRP
Trigger: CGGCCGTGTCCGCCGCCTCCATCCCGGCCGTGCACA...GGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAAGGGGGCCAGCGCCGGGCGTaGGGCCGAGCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: RHRHHTARGTERVGVAQGGQRRA*GRAAFF
Trigger: GAAGAAGGCAGCTCGGCCCCACGCCCGGCGCTGGCC...CCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGACCGAGCGCGTCGGCGTaGCCCAAGGGGCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGPSASA*PKGHSG
Trigger: TCCACTGTGCCCCTTGGGCCACGCCGACGCGCTCGG...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAACACCACACGGCACGTaGCACCGAGCGCGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPTPHGT*HRARRR
Trigger: ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGT...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGGCGACGGGGAGGCCTaGGCTCTGACTCTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQGPARLRPRTGGMSRGAGDGEA*ALTLAG
Trigger: CCCAGCTAGAGTCAGAGCCCAGGCCTCCCCGTCGCC...AGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp TTGGACTCCCCCGCCCCTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGAGACACGCTCCACATTaGGCCCGTAGGTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: LDSPAPLGLVALASAGRGRHAPH*ARRSRT
Trigger: CGTGCGCGACCTACGGGCTCAATGTGGAGCGTGTCT...CCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGTCCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTAGGACGAGTAGTCGCTaGAGGCGCTGCCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCRTSSR*RRCRRH
Trigger: ATGGCGGCGGCAGCGCCTTCAGCGACTACTCGTCCT...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
CDS-3UTR TCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAAGGACGAGTAGTCGCTaGAGGCGCTGCCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPRTSSR*RRCRRH
Trigger: ATGGCGGCGGCAGCGCCTTCAGCGACTACTCGTCCT...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
CDS-3UTR GCA 90 bp AAAGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGGACAGCTGTCCCCCTaGGGCCAGCCCCGCTCCATG +
Preference number: 4 (lower is better)
Translates to: KEGARQARRRRRLPEQEQGQLSP*GQPRSM
Trigger: CATGGAGCGGGGCTGGCCGCAGGGGGACAGCTGTCC...CTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCTTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR GCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTGTGGCCTGGTTGATGTaGACGGCCGGGATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCVAWLM*TAGMEA
Trigger: CGCCTCCATCCCGGCCGTGCACATCAACCAGGCCAC...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
CDS-3UTR GCA 90 bp GTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCGAGCGCCGCTTGGACTaGTTTCGGATGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VPGPGPPPAPHRGHVQRCERRLD*FRMGVG
Trigger: CCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTC...GCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
CDS-3UTR GCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTGGCGTGGGGCCGAGCTaGCTTCTTCTCCATGCAGCG +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCGVGPS*LLLHAA
Trigger: CGCTGCATGGAGAAGAAGGCAGCTCGGCCCCACGCC...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGTGGACGGTGGGGCTaGTGGTCGGGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: GPSAAQTPHGTWHRARRRGGRWG*WSGAQG
Trigger: GCCCTGTGCTCCCGACCAGCAGCCCCACCGTCCACC...ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AAAGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGGAGCCGCCAGGCTCTaGTGCTGCTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: KEGARQARRRRRLPEQEQGAARL*CCCGLC
Trigger: GCAGAGCCCGCAGCAGCAGCAGAGCCTGGCGGCTCC...CTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCTTT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TTGGACTCCCCCGCCCCTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGACACGGCCGAGTGGCTaGGCGAGTTGGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LDSPAPLGLVALASAGRGTRPSG*ASWAVT
Trigger: AGTCACTGCCCAACTCGCCCAGCCACTCGGCCGTGT...CCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGTCCAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAATGCGCAGCTCCCGCTaGCTGATGCTGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPMRSSR*LMLGVE
Trigger: CTCCACCCCCAGCATCAGCCAGCGGGAGCTGCGCAT...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
CDS-3UTR CCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGACGTGGGTCTCTGGAGTaGGGAGCTCGGCGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGRGSLE*GARRPL
Trigger: AAGCGGCCGCCGAGCTCCCCACTCCAGAGACCCACG...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp AGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGTTCCCGTGGGTCTCTaGAGTGGGGAGCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: RGQGKRGGGGGFRSRSRNVPVGL*SGELGG
Trigger: GCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAAC...GTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAAGGGCCGAGCGCGTCGGCGTaGCCCAAGGGGCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: RHRHHTARGTERVGVAQGPSASA*PKGHSG
Trigger: TCCACTGTGCCCCTTGGGCCACGCCGACGCGCTCGG...CCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGACGAGGAGGTGGACGGTaGGGCTGCTGGTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGRGGGR*GCWSGA
Trigger: TGCTCCCGACCAGCAGCCCCACCGTCCACCTCCTCG...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGGGGCGAGTTGGGCAGTaGCTTGCAGGGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: WPVCGTDTTRHVAPSASAGRVGQ*LAGPDG
Trigger: GCCATCGGGCCCTGCAAGTCACTGCCCAACTCGCCC...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp GGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTAGCAGCACAGGTCACTaGGCCGGGCCCGCCCCTTAC +
Preference number: 4 (lower is better)
Translates to: GPSAAQTPHGTWHRARRRSSTGH*AGPAPY
Trigger: GTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCT...ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAGCAGCACAGGTCACTaGGCCGGGCCCGCCCCTTAC +
Preference number: 4 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPSSTGH*AGPAPY
Trigger: GTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCT...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCGGCCCGATGGCCAGTTaGTGCTTCTTTCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: VPGPGPPPAPHRGHVQRCGPMAS*CFFRKA
Trigger: GGCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCC...GCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAGTGGCCTGGTTGATGTaGACGGCCGGGATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGVAWLM*TAGMEA
Trigger: CGCCTCCATCCCGGCCGTGCACATCAACCAGGCCAC...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGAGCACTGGCCAGCGCTaGCTGCTCCACAACGCCGCG +
Preference number: 4 (lower is better)
Translates to: ARLRHRHHTARGTERVGVSTGQR*LLHNAA
Trigger: CGCGGCGTTGTGGAGCAGCCAGCGCTGGCCAGTGCT...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR CCA 90 bp TCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTACACGGCCGAGTGGCTaGGCGAGTTGGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: SQGPARLRPRTGGMSRGATRPSG*ASWAVT
Trigger: AGTCACTGCCCAACTCGCCCAGCCACTCGGCCGTGT...AGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCACACCACACGGCACGTaGCACCGAGCGCGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPTPHGT*HRARRR
Trigger: ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGT...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTCGAGGAGGTGGACGGTaGGGCTGCTGGTCGGGAGCA +
Preference number: 4 (lower is better)
Translates to: GPSAAQTPHGTWHRARRRRGGGR*GCWSGA
Trigger: TGCTCCCGACCAGCAGCCCCACCGTCCACCTCCTCG...ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp AGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGCGGTGCACCAGGGCTaGCTTCCCGCTAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: RGQGKRGGGGGFRSRSRNAVHQG*LPARQV
Trigger: AACCTGTCTAGCGGGAAGTCAGCCCTGGTGCACCGC...GTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp CCTTCTTCTCCATGCAGCGAGCCTGCAGCGTCCGGCCGGGCCTGGTCCCCGGCAAGCAGCACAGGTCACTaGGCCGGGCCCGCCCCTTAC +
Preference number: 4 (lower is better)
Translates to: PSSPCSEPAASGRAWSPASSTGH*AGPAPY
Trigger: GTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCT...TGCCGGGGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGCGCTGATGGCATCCTaGGTGCCCACAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPALMAS*VPTSTM
Trigger: CATGGTGCTTGTGGGCACGCAGGATGCCATCAGCGC...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp TCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGGCCCGATGGCCAGTTaGTGCTTCTTTCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SQGPARLRPRTGGMSRGAGPMAS*CFFRKA
Trigger: GGCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCC...AGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGTGGCCTGGTTGATGTaGACGGCCGGGATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GPSAAQTPHGTWHRARRRVAWLM*TAGMEA
Trigger: CGCCTCCATCCCGGCCGTGCACATCAACCAGGCCAC...ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR GCA 90 bp CCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCGGCGTGGGGCCGAGCTaGCTTCTTCTCCATGCAGCG +
Preference number: 4 (lower is better)
Translates to: PSAAQTPHGTWHRARRRGGVGPS*LLLHAA
Trigger: CGCTGCATGGAGAAGAAGGCAGCTCGGCCCCACGCC...GCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGGGCGTGGGGCCGAGCTaGCTTCTTCTCCATGCAGCG +
Preference number: 4 (lower is better)
Translates to: WPVCGTDTTRHVAPSASAGVGPS*LLLHAA
Trigger: CGCTGCATGGAGAAGAAGGCAGCTCGGCCCCACGCC...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGGCAGATGGCCCGTCTaGGGCACAGACACCACACGG +
Preference number: 4 (lower is better)
Translates to: ARLRHRHHTARGTERVGVGRWPV*GTDTTR
Trigger: CCGTGTGGTGTCTGTGCCGCAGACGGGCCATCTGCC...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTTCACAAACGAGTCGCTaGGCGCGCGCAGGAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GPSAAQTPHGTWHRARRRSQTSR*ARAGAP
Trigger: CGGAGCTCCTGCGCGCGCCCAGCGACTCGTTTGTGA...ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR CCA 90 bp TTGGACTCCCCCGCCCCTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGACCGCTTCAGATCTGTaGAGAGCTTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LDSPAPLGLVALASAGRGTASDL*RACGLC
Trigger: GCAGAGCCCGCAAGCTCTCCACAGATCTGAAGCGGT...CCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGTCCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAAGGGGGATGGCCGCGGAGTTaGAGAGCGCGAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RHRHHTARGTERVGVAQGGWPRS*RARTAG
Trigger: CCCAGCAGTTCGCGCTCTCCAACTCCGCGGCCATCC...CCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp GGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGGAGCTCGGCGGCCGCCCGGGCCAGCAGCCCTaGCTCGGAGCGCCGCACCTC +
Preference number: 4 (lower is better)
Translates to: GLVTKVPVGLWSGELGGRPGQQP*LGAPHL
Trigger: GAGGTGCGGCGCTCCGAGTCAGGGCTGCTGGCCCGG...GCGGCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR TCA 90 bp GGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTCATTCGTGGCCTGGTTaGTGTGCACGGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: GPSAAQTPHGTWHRARRRHSWPG*CARPGW
Trigger: CCATCCCGGCCGTGCACATCAACCAGGCCACGAATG...ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR TCA 90 bp CCTTCTTCTCCATGCAGCGAGCCTGCAGCGTCCGGCCGGGCCTGGTCCCCGGCAAGGACGAGTAGTCGCTaGAGGCGCTGCCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PSSPCSEPAASGRAWSPARTSSR*RRCRRH
Trigger: ATGGCGGCGGCAGCGCCTTCAGCGACTACTCGTCCT...TGCCGGGGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR TCA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGCGCAAAGTCCACAAGTaGGCGGGCAGATGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: WPVCGTDTTRHVAPSASARKVHK*AGRWPV
Trigger: GACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCG...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTAACGAGGCAGCGTGGTaGAGCCCAGGAAAAGATGGC +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCNEAAW*SPGKDG
Trigger: GCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTT...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCATGGCACATATCTGGTTaGTGTGCACGGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPWHISG*CARPGW
Trigger: CCATCCCGGCCGTGCACATCAACCAGATATGTGCCA...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479901.5
CDS-3UTR GCA 90 bp CCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCA +
Preference number: 4 (lower is better)
Translates to: PSAAQTPHGTWHRARRRGAPRWR*GSCRDA
Trigger: TGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGC...GCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp TTGGACTCCCCCGCCCCTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGGCGCCAAATCCTCGATaGGCTCGATCAGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: LDSPAPLGLVALASAGRGAPNPR*ARSGRR
Trigger: TCTACGACCTGATCGAGCGCATCGAGGATTTGGCGC...CCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGTCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGCCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ARLRHRHHTARGTERVGVPWAPR*RCGSCR
Trigger: TCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGG...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp AGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCAGAGGTCCATCCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SAAAAAASGAGAGTAEVHPWAPR*RCGSCR
Trigger: TCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGG...ATGGACCTCTGCCGTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCTGCCCACAAGCACCATaGGCACCTCGCTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPCPQAP*APRWRC
Trigger: GCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCA...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGCCCACAAGCACCATaGGCACCTCGCTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: WPVCGTDTTRHVAPSASACPQAP*APRWRC
Trigger: GCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCA...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAACCGCTTCAGATCTGTaGAGAGCTTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPTASDL*RACGLC
Trigger: GCAGAGCCCGCAAGCTCTCCACAGATCTGAAGCGGT...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTACACGGCCGAGTGGCTaGGCGAGTTGGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: GPSAAQTPHGTWHRARRRTRPSG*ASWAVT
Trigger: AGTCACTGCCCAACTCGCCCAGCCACTCGGCCGTGT...ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCACACGGCCGAGTGGCTaGGCGAGTTGGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPTRPSG*ASWAVT
Trigger: AGTCACTGCCCAACTCGCCCAGCCACTCGGCCGTGT...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTTCTTCTCCATGCAGCGAGCCTGCAGCGTCCGGCCGGGCCTGGTCCCCGGCACCGCCATTCGTGGCCTaGTTGATGTGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PSSPCSEPAASGRAWSPAPPFVA*LMCTAG
Trigger: CCCGGCCGTGCACATCAACCAGGCCACGAATGGCGG...TGCCGGGGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp TTGGACTCCCCCGCCCCTCTGGGCCTCGTCGCGCTGGCCAGCGCCGGGCGTGGGTTACAAAGGTTCCCGTaGGTCTCTGGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LDSPAPLGLVALASAGRGLQRFP*VSGVGS
Trigger: GCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAA...CCCACGCCCGGCGCTGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGTCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GAGGCCAGAAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAGGCCAGCGCCGGGCGTaGGGCCGAGCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: EARRGPAPCQAPGAESTRGQRRA*GRAAFF
Trigger: GAAGAAGGCAGCTCGGCCCCACGCCCGGCGCTGGCC...TCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTTCTGGCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGAACTCCCCCGCCCCTCTaGGCCTCGTCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRTPPPL*ASSRWP
Trigger: TGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGT...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTGGTGGGTGGAAAGCATaGATTTTCCCCTCGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCGGWKA*IFPSAV
Trigger: CACTGCCGAGGGGAAAATTCATGCTTTCCACCCACC...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR GCA 90 bp GAGGCCAGAAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGACCTCCAGGAAAGTCATaGTGGCCGGCCGGGGCCGCG +
Preference number: 4 (lower is better)
Translates to: EARRGPAPCQAPGAESTRPPGKS*WPAGAA
Trigger: CGCGGCCCCGGCCGGCCAGCATGACTTTCCTGGAGG...TCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTTCTGGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS-3UTR GCA 90 bp TCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTTGGCGTTGCGGAAGCTaGAGAGACGCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SQGPARLRPRTGGMSRGAWRCGS*RDAGSS
Trigger: ACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCA...AGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AGTGGGGAGCTCGGCGGCCGCTTCTCATCTGAGAGCAGTCCCAGGGCCCGGCCCGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCA +
Preference number: 4 (lower is better)
Translates to: SGELGGRFSSESSPRARPAPRWR*GSCRDA
Trigger: TGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGC...GGGCCGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCGCCGAGCTCCCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCGGCCCGATGGCCAGTTaGTGCTTCTTTCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RLRHRHHTARGTERVGVAGPMAS*CFFRKA
Trigger: GGCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCC...GGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCAGAGGTCCATCTGCCTTCTTCTCCATaGAGCGAGCCTGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: SAAAAAASGAGAGTAEVHLPSSP*SEPAAS
Trigger: GGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAG...ATGGACCTCTGCCGTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGCTGCCTTCTTCTCCATaGAGCGAGCCTGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: ARLRHRHHTARGTERVGVLPSSP*SEPAAS
Trigger: GGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAG...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCATTCTGGGCCACGTCCTaGAAGACACGCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPFWATS*KTRSTL
Trigger: CAATGTGGAGCGTGTCTTCCAGGACGTGGCCCAGAA...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTTTACAAAGGTTCCCGTaGGTCTCTGGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCLQRFP*VSGVGS
Trigger: GCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAA...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp AGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACACCCTGTCAAGCTCCTaGGGCAGAGTCCACCCGAAT +
Preference number: 4 (lower is better)
Translates to: RGQGKRGGGGGFRSRSRNTLSSS*GRVHPN
Trigger: ATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGT...GTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCGAACACAAACACCACTaGATCCACCCAGGCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VPGPGPPPAPHRGHVQRCEHKHH*IHPGSK
Trigger: TTTGCTGCCTGGGTGGATGCAGTGGTGTTTGTGTTC...GCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCGATCTGTGGAGAGCTTaGGGGCTCTGCTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: RLRHRHHTARGTERVGVADLWRA*GLCCRR
Trigger: TCGACGACAGCAGAGCCCGCAAGCTCTCCACAGATC...GGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGT +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGGHVQR*CVSPTG
Trigger: ACCAGTTGGTGACACACAGCACCTCTGGACATGCCC...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCATATCTGGTTGATGTaGACGGCCGGGATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: PSAAQTPHGTWHRARRRGHIWLM*TAGMEA
Trigger: CGCCTCCATCCCGGCCGTGCACATCAACCAGATATG...GCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479901.5
CDS-3UTR CCA 90 bp AGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCAGAGGTCCATACCGCTTCAGATCTGTaGAGAGCTTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SAAAAAASGAGAGTAEVHTASDL*RACGLC
Trigger: GCAGAGCCCGCAAGCTCTCCACAGATCTGAAGCGGT...ATGGACCTCTGCCGTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGATTCTGGGCCACGTCCTaGAAGACACGCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: RGGKASAAAAAASGAGAGFWATS*KTRSTL
Trigger: CAATGTGGAGCGTGTCTTCCAGGACGTGGCCCAGAA...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGAGCGGACACGGCCGAGTaGCTGGGCGAGTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRADTAE*LGELGS
Trigger: ACTGCCCAACTCGCCCAGCCACTCGGCCGTGTCCGC...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCCTAGGAGGCCAGCGCCGGGCGTaGGGCCGAGCTGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PAPCQAPGAESTRMRILGGQRRA*GRAAFF
Trigger: GAAGAAGGCAGCTCGGCCCCACGCCCGGCGCTGGCC...TCCTAGGATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTAACTCCCCCGCCCCTCTaGGCCTCGTCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: YTRHHTEQHRSLSRARPLTPPPL*ASSRWP
Trigger: TGGCCAGCGCGACGAGGCCCAGAGGGGCGGGGGAGT...TAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCACCCTGTCAAGCTCCTaGGGCAGAGTCCACCCGAAT +
Preference number: 4 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPTLSSS*GRVHPN
Trigger: ATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGT...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp AGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCAGAGGTCCATGCCCAAGGGGCACAGTaGATGGACAGAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SAAAAAASGAGAGTAEVHAQGAQ*MDRERR
Trigger: TCTCCTCTCTCTGTCCATCCACTGTGCCCCTTGGGC...ATGGACCTCTGCCGTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGGAGCTCGGCGGCCGCCCGAGCGCGTCGGCGTaGCCCAAGGGGCACAGTGGA +
Preference number: 4 (lower is better)
Translates to: GLVTKVPVGLWSGELGGRPSASA*PKGHSG
Trigger: TCCACTGTGCCCCTTGGGCCACGCCGACGCGCTCGG...GCGGCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGAACACCACACGGCACGTaGCACCGAGCGCGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRTPHGT*HRARRR
Trigger: ACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGT...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp AGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCAGAGGTCCATCAGTGGCACATATCGTaGAGATGTTGGAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SAAAAAASGAGAGTAEVHQWHIS*RCWSAA
Trigger: AGCGGCGCTCCAACATCTTCACGATATGTGCCACTG...ATGGACCTCTGCCGTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR TCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCGCACCCGGGACAGGTaGGCCCCCAGGTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTRTRDR*APRCRW
Trigger: CCACCGACACCTGGGGGCTCACCTGTCCCGGGTGCG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCTGGCGTTGCGGAAGCTaGAGAGACGCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: PSAAQTPHGTWHRARRRGWRCGS*RDAGSS
Trigger: ACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCA...GCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGG
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CCTTCTTCTCCATGCAGCGAGCCTGCAGCGTCCGGCCGGGCCTGGTCCCCGGCAGATCTGTGGAGAGCTTaGGGGCTCTGCTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: PSSPCSEPAASGRAWSPADLWRA*GLCCRR
Trigger: TCGACGACAGCAGAGCCCGCAAGCTCTCCACAGATC...TGCCGGGGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGT +
Preference number: 4 (lower is better)
Translates to: WPVCGTDTTRHVAPSASAGHVQR*CVSPTG
Trigger: ACCAGTTGGTGACACACAGCACCTCTGGACATGCCC...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGGGTGGACGGTGGGGCTaGTGGTCGGGAGCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKGGRWG*WSGAQG
Trigger: GCCCTGTGCTCCCGACCAGCAGCCCCACCGTCCACC...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCTCCCGGATCTGGTTCTaGAGCGCCAAATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPSRIWF*SAKSSM
Trigger: CATCGAGGATTTGGCGCTGCAGAACCAGATCCGGGA...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCCGCCGGCCAGCTGCTaGTGCTGCTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTPPASC*CCCGLC
Trigger: GCAGAGCCCGCAGCAGCAGCAGCAGCTGGCCGGCGG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622464.4
CDS-3UTR CCA 90 bp CGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAAGGGTTCTGGGCCACGTCCTaGAAGACACGCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: RHRHHTARGTERVGVAQGFWATS*KTRSTL
Trigger: CAATGTGGAGCGTGTCTTCCAGGACGTGGCCCAGAA...CCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTTCTTCTCCATGCAGCGAGCCTGCAGCGTCCGGCCGGGCCTGGTCCCCGGCAGCCCAAGGGGCACAGTaGATGGACAGAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSSPCSEPAASGRAWSPAAQGAQ*MDRERR
Trigger: TCTCCTCTCTCTGTCCATCCACTGTGCCCCTTGGGC...TGCCGGGGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCCACGGACAGCCCGTTaGCACGGGGGCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTPRTAR*HGGWCP
Trigger: CGGGCACCAGCCCCCGTGCCAACGGGCTGTCCGTGG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGAGGGGGTGGAGGGGACTaGGGACGAGTAGTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRGGGGD*GRVVAE
Trigger: TTCAGCGACTACTCGTCCTCAGTCCCCTCCACCCCC...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR TCA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGACGCAAAGTCCACAAGTaGGCGGGCAGATGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRRKVHK*AGRWPV
Trigger: GACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCG...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGAGAGCGCCGCTTGGACTaGTTTCGGATGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRERRLD*FRMGVG
Trigger: CCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTC...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp AAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATGCGGACACGGCCGAGTaGCTGGGCGAGTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: KRPCTLSSSWGRVHPNADADTAE*LGELGS
Trigger: ACTGCCCAACTCGCCCAGCCACTCGGCCGTGTCCGC...ATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGATGGAGGAGGCAGCGATaGTCTCGATGCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRWRRQR*SRCAAP
Trigger: GGGAGCTGCGCATCGAGACCATCGCTGCCTCCTCCA...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp CCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCCTAGGACGTGGGTCTCTGGAGTaGGGAGCTCGGCGGCCGCTT +
Preference number: 4 (lower is better)
Translates to: PAPCQAPGAESTRMRILGRGSLE*GARRPL
Trigger: AAGCGGCCGCCGAGCTCCCCACTCCAGAGACCCACG...TCCTAGGATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTTCTTCTCCATGCAGCGAGCCTGCAGCGTCCGGCCGGGCCTGGTCCCCGGCATTACAAAGGTTCCCGTaGGTCTCTGGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PSSPCSEPAASGRAWSPALQRFP*VSGVGS
Trigger: GCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAA...TGCCGGGGACCAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGAGAAGAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp AGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACAGATGGCGTAGATATTaGGATGCACGGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: RGQGKRGGGGGFRSRSRNRWRRY*DARTRS
Trigger: GCTTCGAGTCCGTGCATCCCAATATCTACGCCATCT...GTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCACGGAGCAGGAGCGCTaGTGCAGCCCCTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTTEQER*CSPSGR
Trigger: GCGCCCTGAGGGGCTGCACCAGCGCTCCTGCTCCGT...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp AGTGGGGAGCTCGGCGGCCGCTTCTCATCTGAGAGCAGTCCCAGGGCCCGGCCCACAGTGGCACATATCTaGTTGATGTGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: SGELGGRFSSESSPRARPTVAHI*LMCTAG
Trigger: CCCGGCCGTGCACATCAACCAGATATGTGCCACTGT...GGGCCGGGCCCTGGGACTGCTCTCAGATGAGAAGCGGCCGCCGAGCTCCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479901.5
CDS-3UTR TCA 90 bp AAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATGGGGATTCGCAGCGCTaGTGGCATCCTGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: KRPCTLSSSWGRVHPNADGDSQR*WHPACP
Trigger: TGGGCACGCAGGATGCCATCAGCGCTGCGAATCCCC...ATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTGGGGATTCGCAGCGCTaGTGGCATCCTGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLGDSQR*WHPACP
Trigger: TGGGCACGCAGGATGCCATCAGCGCTGCGAATCCCC...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATGGCAGATGGCCCGTCTaGGGCACAGACACCACACGG +
Preference number: 4 (lower is better)
Translates to: KRPCTLSSSWGRVHPNADGRWPV*GTDTTR
Trigger: CCGTGTGGTGTCTGTGCCGCAGACGGGCCATCTGCC...ATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGGGCCACTGGCAGGGTaGTGCATGCCTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQGPLAG*CMPGGR
Trigger: CCTGCCCCCAGGCATGCAGCACCCTGCCAGTGGCCC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTGTTGCCGCGGACGGTaGGGACGGCCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTCCRGR*GRPAQP
Trigger: TGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACA...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTTCCCTGGGGGTGGGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGGCGGACACGGCCGAGTaGCTGGGCGAGTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PSLGVGLVTKVPVGLWSGADTAE*LGELGS
Trigger: ACTGCCCAACTCGCCCAGCCACTCGGCCGTGTCCGC...CCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCCCACCCCCAGGGAAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGTGTGCACGGCCGGGATaGAGGCGGCGGACACGGCCG +
Preference number: 4 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPCARPG*RRRTRP
Trigger: CGGCCGTGTCCGCCGCCTCCATCCCGGCCGTGCACA...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCCTAGGACCGCCATTCGTGGCCTaGTTGATGTGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PAPCQAPGAESTRMRILGPPFVA*LMCTAG
Trigger: CCCGGCCGTGCACATCAACCAGGCCACGAATGGCGG...TCCTAGGATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp GGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGGAGCTCGGCGGCCGCGCTTTCGGATGGGTGTaGGGGTGGAGGAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GLVTKVPVGLWSGELGGRAFGWV*GWRRQR
Trigger: TCGCTGCCTCCTCCACCCCCACACCCATCCGAAAGC...GCGGCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp CCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCCTAGGAGGATGGCCGCGGAGTTaGAGAGCGCGAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: PAPCQAPGAESTRMRILGGWPRS*RARTAG
Trigger: CCCAGCAGTTCGCGCTCTCCAACTCCGCGGCCATCC...TCCTAGGATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCAGATGGCGTAGATATTaGGATGCACGGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: RLRHRHHTARGTERVGVARWRRY*DARTRS
Trigger: GCTTCGAGTCCGTGCATCCCAATATCTACGCCATCT...GGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGTGGTGCCCGGGGCTGTaGCAGGTGTGGCTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQWCPGL*QVWLGA
Trigger: TGCCCCGAGCCACACCTGCCACAGCCCCGGGCACCA...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCTTTCATCCTCCAGGCTaGACACAAACACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: RLRHRHHTARGTERVGVAFHPPG*TQTPLH
Trigger: ATGCAGTGGTGTTTGTGTTCAGCCTGGAGGATGAAA...GGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGTTTCATCCTCCAGGCTaGACACAAACACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: ARLRHRHHTARGTERVGVFHPPG*TQTPLH
Trigger: ATGCAGTGGTGTTTGTGTTCAGCCTGGAGGATGAAA...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTAGACACGCTCCACATTaGGCCCGTAGGTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLRHAPH*ARRSRT
Trigger: CGTGCGCGACCTACGGGCTCAATGTGGAGCGTGTCT...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGCATTCGTGGCCTGGTTaGTGTGCACGGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKHSWPG*CARPGW
Trigger: CCATCCCGGCCGTGCACATCAACCAGGCCACGAATG...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR TCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCAGGACGAGTAGTCGCTaGAGGCGCTGCCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTRTSSR*RRCRRH
Trigger: ATGGCGGCGGCAGCGCCTTCAGCGACTACTCGTCCT...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp AAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATGGGGGTGGAGGGGACTaGGGACGAGTAGTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: KRPCTLSSSWGRVHPNADGGGGD*GRVVAE
Trigger: TTCAGCGACTACTCGTCCTCAGTCCCCTCCACCCCC...ATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR TCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTCGCAAAGTCCACAAGTaGGCGGGCAGATGGCCCGTC +
Preference number: 4 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLRKVHK*AGRWPV
Trigger: GACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCG...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACGCACCCGGGACAGGTaGGCCCCCAGGTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSRTRDR*APRCRW
Trigger: CCACCGACACCTGGGGGCTCACCTGTCCCGGGTGCG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCGCACCCGGGACAGGTaGGCCCCCAGGTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNRTRDR*APRCRW
Trigger: CCACCGACACCTGGGGGCTCACCTGTCCCGGGTGCG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTAGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCA +
Preference number: 4 (lower is better)
Translates to: YTRHHTEQHRSLSRARPLAPRWR*GSCRDA
Trigger: TGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGC...TAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGTCCATGCAGCGAGCCTaGAGCGTCCGGCCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPSMQRA*SVRPGL
Trigger: CAGGCCCGGCCGGACGCTGCAGGCTCGCTGCATGGA...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCATGCTGCTGCGGGCTCTaGCCCCCGCCCGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSCCCGL*PPPAWK
Trigger: CTTCCAGGCGGGCGGGGGGCAGAGCCCGCAGCAGCA...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATGAGCAGGAGCGCTGGTaGAGCCCCTCAGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNEQERW*SPSGRG
Trigger: CCCGCGCCCTGAGGGGCTGCACCAGCGCTCCTGCTC...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGAGCAGGAGCGCTGGTaGAGCCCCTCAGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFREQERW*SPSGRG
Trigger: CCCGCGCCCTGAGGGGCTGCACCAGCGCTCCTGCTC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTCCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLPWAPR*RCGSCR
Trigger: TCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGG...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTTGCCCACAAGCACCATaGGCACCTCGCTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLCPQAP*APRWRC
Trigger: GCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCA...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGCGGACACGGCCGAGTaGCTGGGCGAGTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQADTAE*LGELGS
Trigger: ACTGCCCAACTCGCCCAGCCACTCGGCCGTGTCCGC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGTGTGCACGGCCGGGATaGAGGCGGCGGACACGGCCG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRCARPG*RRRTRP
Trigger: CGGCCGTGTCCGCCGCCTCCATCCCGGCCGTGCACA...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTGTGCACGGCCGGGATaGAGGCGGCGGACACGGCCG +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLCARPG*RRRTRP
Trigger: CGGCCGTGTCCGCCGCCTCCATCCCGGCCGTGCACA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCATGCGCAGCTCCCGCTaGCTGATGCTGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTMRSSR*LMLGVE
Trigger: CTCCACCCCCAGCATCAGCCAGCGGGAGCTGCGCAT...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTGCTTTCGGATGGGTGTaGGGGTGGAGGAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLAFGWV*GWRRQR
Trigger: TCGCTGCCTCCTCCACCCCCACACCCATCCGAAAGC...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCCGTTGGCACGGGGGCTaGTGCCCGGGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSRWHGG*CPGLWQ
Trigger: CTGCCACAGCCCCGGGCACCAGCCCCCGTGCCAACG...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCCACGGACAGCCCGTTaGCACGGGGGCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRPRTAR*HGGWCP
Trigger: CGGGCACCAGCCCCCGTGCCAACGGGCTGTCCGTGG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGCGCTGCTGGCCGAGTaGGGGGCACCTGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSALLAE*GAPVPP
Trigger: TGGGGGCACAGGTGCCCCCCACTCGGCCAGCAGCGC...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGCGAGCATATGCCAGTaGAGTCAGGCCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTASICQ*SQAPGV
Trigger: GACGCCCGGGGCCTGACTCCACTGGCATATGCTCGC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCATGTCTGCACACTCCTaGCTGCCGGCCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTMSAHS*LPARRA
Trigger: TGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACAT...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAAAAAGTTGGAAACAGTaGCACATATCTGAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ESSPRARPASGPAQGACPKSWKQ*HISERE
Trigger: CTCCCTCTCAGATATGTGCCACTGTTTCCAACTTTT...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp CCTTCCCTGGGGGTGGGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGAGACACGCTCCACATTaGGCCCGTAGGTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: PSLGVGLVTKVPVGLWSGRHAPH*ARRSRT
Trigger: CGTGCGCGACCTACGGGCTCAATGTGGAGCGTGTCT...CCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCCCACCCCCAGGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCGCACCCGGGACAGGTaGGCCCCCAGGTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIRTRDR*APRCRW
Trigger: CCACCGACACCTGGGGGCTCACCTGTCCCGGGTGCG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCA +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTAPRWR*GSCRDA
Trigger: TGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTAGCGCTGATGGCATCCTaGGTGCCCACAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: YTRHHTEQHRSLSRARPLALMAS*VPTSTM
Trigger: CATGGTGCTTGTGGGCACGCAGGATGCCATCAGCGC...TAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp TTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTGCGCTGATGGCATCCTaGGTGCCCACAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: LHTAPYRAAQVTEPGPPLALMAS*VPTSTM
Trigger: CATGGTGCTTGTGGGCACGCAGGATGCCATCAGCGC...AAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGAGCGCCGCTTGGACTaGTTTCGGATGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTERRLD*FRMGVG
Trigger: CCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGCACTGCGGCAGCCTTaGAGGCTGGCAAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTALRQP*RLARIW
Trigger: CCAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGACGGTGCGGACGGCCTaGACAGCCAGAGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQTVRTA*TARAAF
Trigger: GAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGT...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGACGGCCCGGAGCAGCTaGTGCCCCAGTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQTARSS*CPSGTS
Trigger: AGATGTGCCACTGGGGCAGCAGCTGCTCCGGGCCGT...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGCTGCACACTCCTGGCTaGCGGCCCGGCGAGCATATG +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQLHTPG*RPGEHM
Trigger: CATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAG...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCACACGGCCGAGTGGCTaGGCGAGTTGGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTTRPSG*ASWAVT
Trigger: AGTCACTGCCCAACTCGCCCAGCCACTCGGCCGTGT...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGGTTCCCGTGGGTCTCTaGAGTGGGGAGCTCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPVPVGL*SGELGG
Trigger: GCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAAC...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATGGGCTGTGGCAGGTGTaGCTCGGGGCAGGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNGLWQV*LGAGAS
Trigger: GGAAGCGCCTGCCCCGAGCCACACCTGCCACAGCCC...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTGGTGCCCGGGGCTGTaGCAGGTGTGGCTCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLWCPGL*QVWLGA
Trigger: TGCCCCGAGCCACACCTGCCACAGCCCCGGGCACCA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACGTTGGCACGGGGGCTaGTGCCCGGGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQRWHGG*CPGLWQ
Trigger: CTGCCACAGCCCCGGGCACCAGCCCCCGTGCCAACG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCGTTGGCACGGGGGCTaGTGCCCGGGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIRWHGG*CPGLWQ
Trigger: CTGCCACAGCCCCGGGCACCAGCCCCCGTGCCAACG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACCACGGACAGCCCGTTaGCACGGGGGCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQPRTAR*HGGWCP
Trigger: CGGGCACCAGCCCCCGTGCCAACGGGCTGTCCGTGG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCACGGACAGCCCGTTaGCACGGGGGCTGGTGCCCG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIPRTAR*HGGWCP
Trigger: CGGGCACCAGCCCCCGTGCCAACGGGCTGTCCGTGG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCACGGAGCAGGAGCGCTaGTGCAGCCCCTCAGGGCGC +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSTEQER*CSPSGR
Trigger: GCGCCCTGAGGGGCTGCACCAGCGCTCCTGCTCCGT...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGTGCTGCATGCCTaGGGGCAGGGAAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQRVLHA*GQGSGG
Trigger: GCCACCACTTCCCTGCCCCCAGGCATGCAGCACCCT...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCCTCCCAGACGCTGTTaGCGAGGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTPPRRC*RGHCPW
Trigger: CCATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCATCAGGCCCTGGCTTaGAGTAGCCACCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTHQALA*SSHPRP
Trigger: GGGCCTTGGGTGGCTACTCCAAGCCAGGGCCTGATG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGACACGCTCCACATTaGGCCCGTAGGTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQRHAPH*ARRSRT
Trigger: CGTGCGCGACCTACGGGCTCAATGTGGAGCGTGTCT...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGGGCGAGTTGGGCAGTaGCTTGCAGGGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRGRVGQ*LAGPDG
Trigger: GCCATCGGGCCCTGCAAGTCACTGCCCAACTCGCCC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAGGGCGAGTTGGGCAGTaGCTTGCAGGGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSGRVGQ*LAGPDG
Trigger: GCCATCGGGCCCTGCAAGTCACTGCCCAACTCGCCC...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGGGGGTGGAGGGGACTaGGGACGAGTAGTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQGGGGD*GRVVAE
Trigger: TTCAGCGACTACTCGTCCTCAGTCCCCTCCACCCCC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCAGGATCCCCTGCTTaGTGGGGATGGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQAGSPA*WGWRGR
Trigger: GCGGCCGCGCCATCCCCATCAAGCAGGGGATCCTGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGCAGGATCCCCTGCTTaGTGGGGATGGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIAGSPA*WGWRGR
Trigger: GCGGCCGCGCCATCCCCATCAAGCAGGGGATCCTGC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGGCTGGGGTGATAGGTaGGCAGCCCGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTGWGDR*AARCHR
Trigger: TCTGTGACAACGGGCTGCTCACCTATCACCCCAGCC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGCTTGGGGCTGGAACTaGGTACCTCAGCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQAWGWN*VPQLGH
Trigger: GTGGCCCAGCTGAGGTACTCAGTTCCAGCCCCAAGC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGCAGGATGAAGGCGTGTaGGGGGCTGGCACTAGGAGG +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQQDEGV*GAGTRR
Trigger: CCTCCTAGTGCCAGCCCCTCACACGCCTTCATCCTG...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGCGCTGATGGCATCCTaGGTGCCCACAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTALMAS*VPTSTM
Trigger: CATGGTGCTTGTGGGCACGCAGGATGCCATCAGCGC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGGATCTGTGGAGAGCTTaGGGGCTCTGCTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKDLWRA*GLCCRR
Trigger: TCGACGACAGCAGAGCCCGCAAGCTCTCCACAGATC...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGGAGCTCGGCGGCCGCCCGATGGCCAGTTGCTaGTTCTTTCGCAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: GLVTKVPVGLWSGELGGRPMASC*FFRKAT
Trigger: AGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGG...GCGGCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CCTTCCCTGGGGGTGGGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGCTGCCTTCTTCTCCATaGAGCGAGCCTGCAGCGTCC +
Preference number: 4 (lower is better)
Translates to: PSLGVGLVTKVPVGLWSGLPSSP*SEPAAS
Trigger: GGACGCTGCAGGCTCGCTGCATGGAGAAGAAGGCAG...CCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCCCACCCCCAGGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATAGGGGGCGCTCAGAGTaGAGGGATGCGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNRGRSE*RDALLA
Trigger: GGCCAGCAGCGCATCCCTGCACTCTGAGCGCCCCCT...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGGGCCACTGGCAGGGTaGTGCATGCCTGGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQGPLAG*CMPGGR
Trigger: CCTGCCCCCAGGCATGCAGCACCCTGCCAGTGGCCC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGCACTGCGGCAGCCTTaGAGGCTGGCAAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQALRQP*RLARIW
Trigger: CCAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATTGTTGCCGCGGACGGTaGGGACGGCCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNCCRGR*GRPAQP
Trigger: TGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACA...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCGATACAAAAGCTGTTaGCGCGGACGGTGCGGACGG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTRYKSC*RGRCGR
Trigger: CCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGGCCCGGCGAGCATATaGCAGTGGAGTCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRGPASI*QWSQAP
Trigger: CGGGGCCTGACTCCACTGGCATATGCTCGCCGGGCC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAGGCCCGGCGAGCATATaGCAGTGGAGTCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSGPASI*QWSQAP
Trigger: CGGGGCCTGACTCCACTGGCATATGCTCGCCGGGCC...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGAGGGAGAGGTCCTaGTCCCCTCTCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQRRERS*SPLLTG
Trigger: GCCTGTGAGGAGAGGGGAGCAGGACCTCTCCCTCCT...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGGAGCTCGGCGGCCGCAAGGCCACTACCTTCTaGGCCACGTCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: GLVTKVPVGLWSGELGGRKATTF*ATSWKT
Trigger: TGTCTTCCAGGACGTGGCCCAGAAGGTAGTGGCCTT...GCGGCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGCGGACACGGCCGAGTaGCTGGGCGAGTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRADTAE*LGELGS
Trigger: ACTGCCCAACTCGCCCAGCCACTCGGCCGTGTCCGC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GCAGAGTCCACCCGAATGCGGATCCTAGGAAATAGGGGGAGGCCAAAAAGAGGGATGCGCAGCTCCCGCTaGCTGATGCTGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: AESTRMRILGNRGRPKRGMRSSR*LMLGVE
Trigger: CTCCACCCCCAGCATCAGCCAGCGGGAGCTGCGCAT...CCCTCTTTTTGGCCTCCCCCTATTTCCTAGGATCCGCATTCGGGTGGACTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCGTTGGCACGGGGGCTaGTGCCCGGGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPRWHGG*CPGLWQ
Trigger: CTGCCACAGCCCCGGGCACCAGCCCCCGTGCCAACG...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGCGCTGCTGGCCGAGTaGGGGGCACCTGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFALLAE*GAPVPP
Trigger: TGGGGGCACAGGTGCCCCCCACTCGGCCAGCAGCGC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGCATCAGGCCCTGGCTTaGAGTAGCCACCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQHQALA*SSHPRP
Trigger: GGGCCTTGGGTGGCTACTCCAAGCCAGGGCCTGATG...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATGGGGATTCGCAGCGCTaGTGGCATCCTGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNGDSQR*WHPACP
Trigger: TGGGCACGCAGGATGCCATCAGCGCTGCGAATCCCC...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp GAGGGAGGAACGAGGCAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGAGACACGCTCCACATTaGGCCCGTAGGTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: EGGTRQRGEAQEKMAKPLRHAPH*ARRSRT
Trigger: CGTGCGCGACCTACGGGCTCAATGTGGAGCGTGTCT...CAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTTCCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGAGGACGAGTAGTCGCTaGAGGCGCTGCCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRRTSSR*RRCRRH
Trigger: ATGGCGGCGGCAGCGCCTTCAGCGACTACTCGTCCT...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCGCTTCCCAGCGCCGTaGTCCCGCTGCCTCGGAGCA +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPRFPAP*SRCLGA
Trigger: TGCTCCGAGGCAGCGGGATCACGGCGCTGGGAAGCG...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397238.7
CDS-3UTR TCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGCAGGATCCCCTGCTTaGTGGGGATGGCGCGGCCGC +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFAGSPA*WGWRGR
Trigger: GCGGCCGCGCCATCCCCATCAAGCAGGGGATCCTGC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGCCACGTCTGCCCAGTaGGGGACACCACCACAAATT +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTATSAQ*GTPPQI
Trigger: AATTTGTGGTGGTGTCCCTCACTGGGCAGACGTGGC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACCGCTCCTCCGCCGTTaGAGCCTCGAAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSPLLRR*SLEVPR
Trigger: ACGTGGCACTTCGAGGCTTCAACGGCGGAGGAGCGG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTGGGCCTGCACACTCTaGACCCACAGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLWACTL*THSSRS
Trigger: GGAGCGGGAGCTGTGGGTTCAGAGTGTGCAGGCCCA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCTTCCTGTTTCAGGATaGAGGCGTGTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTLPVSG*RRVRGW
Trigger: CCAGCCCCTCACACGCCTTCATCCTGAAACAGGAAG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGTGGCGTTGCGGAAGCTaGAGAGACGCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKWRCGS*RDAGSS
Trigger: ACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCA...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGGCCCGATGGCCAGTTaGTGCTTCTTTCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQGPMAS*CFFRKA
Trigger: GGCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAGTGGCCTGGTTGATGTaGACGGCCGGGATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSVAWLM*TAGMEA
Trigger: CGCCTCCATCCCGGCCGTGCACATCAACCAGGCCAC...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATGCGCCAAATCCTCGATaGGCTCGATCAGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: KRPCTLSSSWGRVHPNADAPNPR*ARSGRR
Trigger: TCTACGACCTGATCGAGCGCATCGAGGATTTGGCGC...ATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp TACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTATCCCGGATCTGGTTCTaGAGCGCCAAATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: YTRHHTEQHRSLSRARPLSRIWF*SAKSSM
Trigger: CATCGAGGATTTGGCGCTGCAGAACCAGATCCGGGA...TAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCGCGGCCGCTCCCGATaGTGTCCACCTTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIRGRSR*CPPCTR
Trigger: CCGAGTGCAAGGTGGACAGCATCGGGAGCGGCCGCG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATACGGTGCGGACGGCCTaGACAGCCAGAGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNTVRTA*TARAAF
Trigger: GAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGT...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCACGGTGCGGACGGCCTaGACAGCCAGAGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLTVRTA*TARAAF
Trigger: GAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGT...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCTGTTGCCGCGGACGGTaGGGACGGCCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLICCRGR*GRPAQP
Trigger: TGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACA...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGTTCCTTCTCCTCTCTaGAGGCATCAGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTVPSPL*RHQALA
Trigger: AGCCAGGGCCTGATGCCTGCAGAGAGGAGAAGGAAC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATACGGCCCGGAGCAGCTaGTGCCCCAGTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNTARSS*CPSGTS
Trigger: AGATGTGCCACTGGGGCAGCAGCTGCTCCGGGCCGT...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAACGGCCCGGAGCAGCTaGTGCCCCAGTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSTARSS*CPSGTS
Trigger: AGATGTGCCACTGGGGCAGCAGCTGCTCCGGGCCGT...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGGCCCGGCGAGCATATaGCAGTGGAGTCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQGPASI*QWSQAP
Trigger: CGGGGCCTGACTCCACTGGCATATGCTCGCCGGGCC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACTGCACACTCCTGGCTaGCGGCCCGGCGAGCATATG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSLHTPG*RPGEHM
Trigger: CATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTCCTTCTGGCCCCTCTaGCCTCTTCCTGGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTSFWPL*PLPGPY
Trigger: ATAAGGCCCAGGAAGAGGGCAGAGGGGCCAGAAGGA...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGCGTCCCGCCTTCAGTaGGGCATAGGCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSASRLQ*GIGSPV
Trigger: GACAGGGGAGCCTATGCCGCACTGAAGGCGGGACGC...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463381.5
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCGGACACGGCCGAGTaGCTGGGCGAGTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQADTAE*LGELGS
Trigger: ACTGCCCAACTCGCCCAGCCACTCGGCCGTGTCCGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATGCGCAGCTCCCGCTaGCTGATGCTGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLMRSSR*LMLGVE
Trigger: CTCCACCCCCAGCATCAGCCAGCGGGAGCTGCGCAT...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAATGCGCAGCTCCCGCTaGCTGATGCTGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSMRSSR*LMLGVE
Trigger: CTCCACCCCCAGCATCAGCCAGCGGGAGCTGCGCAT...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GCAGAGTCCACCCGAATGCGGATCCTAGGAAATAGGGGGAGGCCAAAAAGAGGGTGGAGGAGGCAGCGATaGTCTCGATGCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AESTRMRILGNRGRPKRGWRRQR*SRCAAP
Trigger: GGGAGCTGCGCATCGAGACCATCGCTGCCTCCTCCA...CCCTCTTTTTGGCCTCCCCCTATTTCCTAGGATCCGCATTCGGGTGGACTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp CCTTCCCTGGGGGTGGGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGACCCTGTCAAGCTCCTaGGGCAGAGTCCACCCGAAT +
Preference number: 4 (lower is better)
Translates to: PSLGVGLVTKVPVGLWSGTLSSS*GRVHPN
Trigger: ATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGT...CCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCCCACCCCCAGGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTTCCCTGGGGGTGGGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGGCCCAAGGGGCACAGTaGATGGACAGAGAGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PSLGVGLVTKVPVGLWSGAQGAQ*MDRERR
Trigger: TCTCCTCTCTCTGTCCATCCACTGTGCCCCTTGGGC...CCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCCCACCCCCAGGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGGGCTGTGGCAGGTGTaGCTCGGGGCAGGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFGLWQV*LGAGAS
Trigger: GGAAGCGCCTGCCCCGAGCCACACCTGCCACAGCCC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAAGGGTGCTGCATGCCTaGGGGCAGGGAAGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSRVLHA*GQGSGG
Trigger: GCCACCACTTCCCTGCCCCCAGGCATGCAGCACCCT...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCGTTGGCCATGGCACTaGAGAGATGTAGAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTRWPWH*RDVEPS
Trigger: GGACGGCTCTACATCTCTCCAGTGCCATGGCCAACG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATGCGAGCATATGCCAGTaGAGTCAGGCCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNASICQ*SQAPGV
Trigger: GACGCCCGGGGCCTGACTCCACTGGCATATGCTCGC...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATGTCTGCACACTCCTaGCTGCCGGCCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLMSAHS*LPARRA
Trigger: TGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACAT...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAGCGGTGCACCAGGGCTaGCTTCCCGCTAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSAVHQG*LPARQV
Trigger: AACCTGTCTAGCGGGAAGTCAGCCCTGGTGCACCGC...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGGGGATTCGCAGCGCTaGTGGCATCCTGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIGDSQR*WHPACP
Trigger: TGGGCACGCAGGATGCCATCAGCGCTGCGAATCCCC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAGACACGCTCCACATTaGGCCCGTAGGTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSRHAPH*ARRSRT
Trigger: CGTGCGCGACCTACGGGCTCAATGTGGAGCGTGTCT...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAAGACACGCTCCACATTaGGCCCGTAGGTCGCGCACG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSRHAPH*ARRSRT
Trigger: CGTGCGCGACCTACGGGCTCAATGTGGAGCGTGTCT...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCACATTCGTGGCCTGGTTaGTGTGCACGGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSHSWPG*CARPGW
Trigger: CCATCCCGGCCGTGCACATCAACCAGGCCACGAATG...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCATTCGTGGCCTGGTTaGTGTGCACGGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRHSWPG*CARPGW
Trigger: CCATCCCGGCCGTGCACATCAACCAGGCCACGAATG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGCTTGGGGCTGGAACTaGGTACCTCAGCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSAWGWN*VPQLGH
Trigger: GTGGCCCAGCTGAGGTACTCAGTTCCAGCCCCAAGC...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGCCACGTCTGCCCAGTaGGGGACACCACCACAAATT +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQATSAQ*GTPPQI
Trigger: AATTTGTGGTGGTGTCCCTCACTGGGCAGACGTGGC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACCGCTCCTCCGCCGTTaGAGCCTCGAAGTGCCACGT +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQPLLRR*SLEVPR
Trigger: ACGTGGCACTTCGAGGCTTCAACGGCGGAGGAGCGG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCA +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSAPRWR*GSCRDA
Trigger: TGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGC...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGATCTGTGGAGAGCTTaGGGGCTCTGCTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQDLWRA*GLCCRR
Trigger: TCGACGACAGCAGAGCCCGCAAGCTCTCCACAGATC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCCGCGGCCGCTCCCGATaGTGTCCACCTTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFRGRSR*CPPCTR
Trigger: CCGAGTGCAAGGTGGACAGCATCGGGAGCGGCCGCG...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCGCACTGCGGCAGCCTTaGAGGCTGGCAAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSALRQP*RLARIW
Trigger: CCAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGC...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGTTCCTTCTCCTCTCTaGAGGCATCAGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQVPSPL*RHQALA
Trigger: AGCCAGGGCCTGATGCCTGCAGAGAGGAGAAGGAAC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGGCCCGGCGAGCATATaGCAGTGGAGTCAGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFGPASI*QWSQAP
Trigger: CGGGGCCTGACTCCACTGGCATATGCTCGCCGGGCC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTCCCCAGGGCAGCCATaGTGGATCAAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTSPGQP*WIKMSA
Trigger: TGCAGACATCTTGATCCAGCATGGCTGCCCTGGGGA...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGTCCTTCTGGCCCCTCTaGCCTCTTCCTGGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQSFWPL*PLPGPY
Trigger: ATAAGGCCCAGGAAGAGGGCAGAGGGGCCAGAAGGA...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAGGAGGGAGAGGTCCTaGTCCCCTCTCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSRRERS*SPLLTG
Trigger: GCCTGTGAGGAGAGGGGAGCAGGACCTCTCCCTCCT...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATAGGAGGGAGAGGTCCTaGTCCCCTCTCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNRRERS*SPLLTG
Trigger: GCCTGTGAGGAGAGGGGAGCAGGACCTCTCCCTCCT...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGTTCTCCCTGTCTCCCTaGCCAGGCTCTCCACTGCCG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRFSLSP*PGSPLP
Trigger: CGGCAGTGGAGAGCCTGGGCAGGGAGACAGGGAGAA...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463381.5
CDS-3UTR CCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCACCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSPWAPR*RCGSCR
Trigger: TCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGG...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGTGCCCACAAGCACCATaGGCACCTCGCTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRCPQAP*APRWRC
Trigger: GCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCA...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGTTAAACCAATCACAGTGTGCACGGCCGGGATaGAGGCGGCGGACACGGCCG +
Preference number: 4 (lower is better)
Translates to: QRGEAQEKMAKPLLNQSQCARPG*RRRTRP
Trigger: CGGCCGTGTCCGCCGCCTCCATCCCGGCCGTGCACA...CTGTGATTGGTTTAACAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCGCCATTCGTGGCCTaGTTGATGTGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIPPFVA*LMCTAG
Trigger: CCCGGCCGTGCACATCAACCAGGCCACGAATGGCGG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCATGGAGGAGGCAGCGATaGTCTCGATGCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSWRRQR*SRCAAP
Trigger: GGGAGCTGCGCATCGAGACCATCGCTGCCTCCTCCA...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTGGAGGAGGCAGCGATaGTCTCGATGCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLWRRQR*SRCAAP
Trigger: GGGAGCTGCGCATCGAGACCATCGCTGCCTCCTCCA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGCTTTCGGATGGGTGTaGGGGTGGAGGAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRAFGWV*GWRRQR
Trigger: TCGCTGCCTCCTCCACCCCCACACCCATCCGAAAGC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGGATGGCCGCGGAGTTaGAGAGCGCGAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIGWPRS*RARTAG
Trigger: CCCAGCAGTTCGCGCTCTCCAACTCCGCGGCCATCC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGCAGGCGCTTCCCTaGCACTTTCACCGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSGQALP*HFHRCP
Trigger: CGGACAACGGTGAAAGTGCCAGGGAAGCGCCTGCCC...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCAGCTGGGCCACTaGCAGGGTGCTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIPQLGH*QGAACL
Trigger: CAGGCATGCAGCACCCTGCCAGTGGCCCAGCTGAGG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACCTCCCAGACGCTGTTaGCGAGGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSPPRRC*RGHCPW
Trigger: CCATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCCTCCCAGACGCTGTTaGCGAGGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRPPRRC*RGHCPW
Trigger: CCATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAATGTCTGCACACTCCTaGCTGCCGGCCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQMSAHS*LPARRA
Trigger: TGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACAT...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCGGTGCACCAGGGCTaGCTTCCCGCTAGACAGGTT +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQAVHQG*LPARQV
Trigger: AACCTGTCTAGCGGGAAGTCAGCCCTGGTGCACCGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGGGGATTCGCAGCGCTaGTGGCATCCTGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFGDSQR*WHPACP
Trigger: TGGGCACGCAGGATGCCATCAGCGCTGCGAATCCCC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCGGCTGGGGTGATAGGTaGGCAGCCCGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLGWGDR*AARCHR
Trigger: TCTGTGACAACGGGCTGCTCACCTATCACCCCAGCC...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGGCCCGATGGCCAGTTaGTGCTTCTTTCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRGPMAS*CFFRKA
Trigger: GGCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCGGCCCGATGGCCAGTTaGTGCTTCTTTCGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLGPMAS*CFFRKA
Trigger: GGCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCC...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGTGGCCTGGTTGATGTaGACGGCCGGGATGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFVAWLM*TAGMEA
Trigger: CGCCTCCATCCCGGCCGTGCACATCAACCAGGCCAC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGAGCGCCGCTTGGACTaGTTTCGGATGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIERRLD*FRMGVG
Trigger: CCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTGGCAGGGTGCTGCATaGCTGGGGGCAGGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFWQGAA*LGAGKW
Trigger: CCACTTCCCTGCCCCCAGGCATGCAGCACCCTGCCA...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGCACTGCGGCAGCCTTaGAGGCTGGCAAGGATCTGG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIALRQP*RLARIW
Trigger: CCAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCGATACAAAAGCTGTTaGCGCGGACGGTGCGGACGG +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNRYKSC*RGRCGR
Trigger: CCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACGATACAAAAGCTGTTaGCGCGGACGGTGCGGACGG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSRYKSC*RGRCGR
Trigger: CCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCGATACAAAAGCTGTTaGCGCGGACGGTGCGGACGG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRRYKSC*RGRCGR
Trigger: CCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCACGGCCCGGAGCAGCTaGTGCCCCAGTGGCACATCT +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPTARSS*CPSGTS
Trigger: AGATGTGCCACTGGGGCAGCAGCTGCTCCGGGCCGT...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGTCCCCAGGGCAGCCATaGTGGATCAAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQSPGQP*WIKMSA
Trigger: TGCAGACATCTTGATCCAGCATGGCTGCCCTGGGGA...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCTCATCCCTCTCTGCTaGAGCTCAAATCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTLIPLC*SSNPQL
Trigger: GAGTTGGGGATTTGAGCTGCAGCAGAGAGGGATGAG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIPWAPR*RCGSCR
Trigger: TCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GCAGAGTCCACCCGAATGCGGATCCTAGGAAATAGGGGGAGGCCAAAAAGAGGGACCGCTTCAGATCTGTaGAGAGCTTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AESTRMRILGNRGRPKRGTASDL*RACGLC
Trigger: GCAGAGCCCGCAAGCTCTCCACAGATCTGAAGCGGT...CCCTCTTTTTGGCCTCCCCCTATTTCCTAGGATCCGCATTCGGGTGGACTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCCGCCATTCGTGGCCTaGTTGATGTGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPPPFVA*LMCTAG
Trigger: CCCGGCCGTGCACATCAACCAGGCCACGAATGGCGG...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCAGTGGGCCGCCATTCGTGGCCTaGTTGATGTGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: LNQSQRWVESMNFPLGSGPPFVA*LMCTAG
Trigger: CCCGGCCGTGCACATCAACCAGGCCACGAATGGCGG...CCCACTGCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp GGAGGAACGAGGCAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGTTAGCTTTCGGATGGGTGTaGGGGTGGAGGAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: GGTRQRGEAQEKMAKPLLAFGWV*GWRRQR
Trigger: TCGCTGCCTCCTCCACCCCCACACCCATCCGAAAGC...TAACAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTTCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGGGCAGGCGCTTCCCTaGCACTTTCACCGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIGQALP*HFHRCP
Trigger: CGGACAACGGTGAAAGTGCCAGGGAAGCGCCTGCCC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGGGGCAGGGAAGTGGTaGCCTCACTCCACTGGTCGG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFGAGKW*PHSTGR
Trigger: CCGACCAGTGGAGTGAGGCCACCACTTCCCTGCCCC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCACTGAGTACCTCAGCTaGGCCACTGGCAGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLTEYLS*ATGRVL
Trigger: CAGCACCCTGCCAGTGGCCCAGCTGAGGTACTCAGT...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAGTTGGAGTGGGGAGATaGGGGAGGATCCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSVGVGR*GRIQLG
Trigger: CCCAAGCTGGATCCTCCCCCATCTCCCCACTCCAAC...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGTTGGAGTGGGGAGATaGGGGAGGATCCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRVGVGR*GRIQLG
Trigger: CCCAAGCTGGATCCTCCCCCATCTCCCCACTCCAAC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGGTGCTTCTTCCGGTTaGAGTGGGGAGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRGASSG*SGEMGE
Trigger: CTCCCCCATCTCCCCACTCCAACCGGAAGAAGCACC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCGGTGCTTCTTCCGGTTaGAGTGGGGAGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLGASSG*SGEMGE
Trigger: CTCCCCCATCTCCCCACTCCAACCGGAAGAAGCACC...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGTGGCCCAGTCTGGATTaGGTGCATCGCAGTCGATAC +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQWPSLD*VHRSRY
Trigger: GTATCGACTGCGATGCACCCAATCCAGACTGGGCCA...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCGCCCCCAGGTGTCGGTaGATGCCTGAGCACTCAATG +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSAPRCR*MPEHSM
Trigger: CATTGAGTGCTCAGGCATCCACCGACACCTGGGGGC...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGCAGGCATCAGGCCCTaGCTTGGAGTAGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRAGIRP*LGVATQ
Trigger: TTGGGTGGCTACTCCAAGCCAGGGCCTGATGCCTGC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAGGGGTTGGTGCCATTaGCAGGCTCTCTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSRGWCH*QALCWG
Trigger: CCCCCAACAGAGAGCCTGCCAATGGCACCAACCCCT...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGTTTCATCCTCCAGGCTaGACACAAACACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKFHPPG*TQTPLH
Trigger: ATGCAGTGGTGTTTGTGTTCAGCCTGGAGGATGAAA...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR TCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCAGTGGCACATATCGTaGAGATGTTGGAGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPQWHIS*RCWSAA
Trigger: AGCGGCGCTCCAACATCTTCACGATATGTGCCACTG...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR TCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATGCCACGTCTGCCCAGTaGGGGACACCACCACAAATT +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNATSAQ*GTPPQI
Trigger: AATTTGTGGTGGTGTCCCTCACTGGGCAGACGTGGC...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACTTCCTGTTTCAGGATaGAGGCGTGTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSLPVSG*RRVRGW
Trigger: CCAGCCCCTCACACGCCTTCATCCTGAAACAGGAAG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCACTTCCTGTTTCAGGATaGAGGCGTGTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSLPVSG*RRVRGW
Trigger: CCAGCCCCTCACACGCCTTCATCCTGAAACAGGAAG...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCA +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPAPRWR*GSCRDA
Trigger: TGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGC...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCGCTGATGGCATCCTaGGTGCCCACAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQALMAS*VPTSTM
Trigger: CATGGTGCTTGTGGGCACGCAGGATGCCATCAGCGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCGATGGCCAGTTGCTaGTTCTTTCGCAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPPMASC*FFRKAT
Trigger: AGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGG...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GCAGAGTCCACCCGAATGCGGATCCTAGGAAATAGGGGGAGGCCAAAAAGAGGGCCGATGGCCAGTTGCTaGTTCTTTCGCAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: AESTRMRILGNRGRPKRGPMASC*FFRKAT
Trigger: AGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGG...CCCTCTTTTTGGCCTCCCCCTATTTCCTAGGATCCGCATTCGGGTGGACTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp GTTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCAGTGGGAGCGCCGCTTGGACTaGTTTCGGATGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: VKPITAVGGKHEFSPRQWERRLD*FRMGVG
Trigger: CCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTC...CCACTGCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR GCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGAGCGCCGCTTGGACTaGTTTCGGATGGGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFERRLD*FRMGVG
Trigger: CCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GAGGGAGGAACGAGGCAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGT +
Preference number: 4 (lower is better)
Translates to: EGGTRQRGEAQEKMAKPLGHVQR*CVSPTG
Trigger: ACCAGTTGGTGACACACAGCACCTCTGGACATGCCC...CAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTTCCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR GCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGGGGCATGTCCAGAGGTaGTGTGTGTCACCAACTGGT +
Preference number: 4 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPGHVQR*CVSPTG
Trigger: ACCAGTTGGTGACACACAGCACCTCTGGACATGCCC...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCATGCTGCTGCGGGCTCTaGCCCCCGCCCGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPCCCGL*PPPAWK
Trigger: CTTCCAGGCGGGCGGGGGGCAGAGCCCGCAGCAGCA...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGTTGAAGCCTCGAAGTaGCACGTCTGCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRVEASK*HVCPVR
Trigger: CCTCACTGGGCAGACGTGGCACTTCGAGGCTTCAAC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGTTGAAGCCTCGAAGTaGCACGTCTGCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSVEASK*HVCPVR
Trigger: CCTCACTGGGCAGACGTGGCACTTCGAGGCTTCAAC...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCGTTGAAGCCTCGAAGTaGCACGTCTGCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSVEASK*HVCPVR
Trigger: CCTCACTGGGCAGACGTGGCACTTCGAGGCTTCAAC...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCGTTCCTTCTCCTCTCTaGAGGCATCAGGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSVPSPL*RHQALA
Trigger: AGCCAGGGCCTGATGCCTGCAGAGAGGAGAAGGAAC...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCACTGGATCAAGATGTCTaGACACTCCTGGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSLDQDV*TLLAAG
Trigger: GCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAG...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCCTGGATCAAGATGTCTaGACACTCCTGGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSLDQDV*TLLAAG
Trigger: GCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAG...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCAGGCTAGGACTACGGTaGAGCTCAGCAGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSRLGLR*SSAEGL
Trigger: CAACCCCTCTGCTGAGCTGCACCGTAGTCCTAGCCT...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGTCCTTCTGGCCCCTCTaGCCTCTTCCTGGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRSFWPL*PLPGPY
Trigger: ATAAGGCCCAGGAAGAGGGCAGAGGGGCCAGAAGGA...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCATGTCTGTTCCCACAGTaGCTGCAGGGAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSCLFPQ*LQGGGS
Trigger: AGACCCTCCTCCCTGCAGGCACTGTGGGAACAGACA...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTGTCTGTTCCCACAGTaGCTGCAGGGAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLCLFPQ*LQGGGS
Trigger: AGACCCTCCTCCCTGCAGGCACTGTGGGAACAGACA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCATGTCTGTTCCCACAGTaGCTGCAGGGAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSCLFPQ*LQGGGS
Trigger: AGACCCTCCTCCCTGCAGGCACTGTGGGAACAGACA...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCAGGAGGGAGAGGTCCTaGTCCCCTCTCCTCACAGGC +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFRRERS*SPLLTG
Trigger: GCCTGTGAGGAGAGGGGAGCAGGACCTCTCCCTCCT...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTGCCCACAAGCACCATaGGCACCTCGCTGGCGTTGC +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFCPQAP*APRWRC
Trigger: GCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCA...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATACCGCTTCAGATCTGTaGAGAGCTTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNTASDL*RACGLC
Trigger: GCAGAGCCCGCAAGCTCTCCACAGATCTGAAGCGGT...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAACCGCTTCAGATCTGTaGAGAGCTTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSTASDL*RACGLC
Trigger: GCAGAGCCCGCAAGCTCTCCACAGATCTGAAGCGGT...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGACCGCTTCAGATCTGTaGAGAGCTTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRTASDL*RACGLC
Trigger: GCAGAGCCCGCAAGCTCTCCACAGATCTGAAGCGGT...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGAAGGCCACTACCTTCTaGGCCACGTCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPKATTF*ATSWKT
Trigger: TGTCTTCCAGGACGTGGCCCAGAAGGTAGTGGCCTT...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp GCAGAGTCCACCCGAATGCGGATCCTAGGAAATAGGGGGAGGCCAAAAAGAGGGAAGGCCACTACCTTCTaGGCCACGTCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: AESTRMRILGNRGRPKRGKATTF*ATSWKT
Trigger: TGTCTTCCAGGACGTGGCCCAGAAGGTAGTGGCCTT...CCCTCTTTTTGGCCTCCCCCTATTTCCTAGGATCCGCATTCGGGTGGACTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCACACGGCCGAGTGGCTaGGCGAGTTGGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPTRPSG*ASWAVT
Trigger: AGTCACTGCCCAACTCGCCCAGCCACTCGGCCGTGT...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTTGTTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCAGGCGGACACGGCCGAGTaGCTGGGCGAGTTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FVKPITAVGGKHEFSPRQADTAE*LGELGS
Trigger: ACTGCCCAACTCGCCCAGCCACTCGGCCGTGTCCGC...CTGCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCATGTGCACGGCCGGGATaGAGGCGGCGGACACGGCCG +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPCARPG*RRRTRP
Trigger: CGGCCGTGTCCGCCGCCTCCATCCCGGCCGTGCACA...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACCGGGACTACTGGGCTaGCGGCGCGGGGCTAGCGCA +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPPGLLG*RRGASA
Trigger: TGCGCTAGCCCCGCGCCGCCAGCCCAGTAGTCCCGG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397238.7
CDS-3UTR CCA 90 bp AAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCGATCAGGTCGTAGATaGCGTAGATATTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: KRPCTLSSSWGRVHPNADRSGRR*RRYWDA
Trigger: TGCATCCCAATATCTACGCCATCTACGACCTGATCG...ATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCCTAGGACGATCAGGTCGTAGATaGCGTAGATATTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: PAPCQAPGAESTRMRILGRSGRR*RRYWDA
Trigger: TGCATCCCAATATCTACGCCATCTACGACCTGATCG...TCCTAGGATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGGGCAGGCGCTTCCCTaGCACTTTCACCGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFGQALP*HFHRCP
Trigger: CGGACAACGGTGAAAGTGCCAGGGAAGCGCCTGCCC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAGGGCTGTGGCAGGTGTaGCTCGGGGCAGGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAGLWQV*LGAGAS
Trigger: GGAAGCGCCTGCCCCGAGCCACACCTGCCACAGCCC...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGTCGAGTCTTGTCCTTaGCACTGCGGCAGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSVESCP*HCGSLA
Trigger: TGCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGAC...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATGTCGAGTCTTGTCCTTaGCACTGCGGCAGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNVESCP*HCGSLA
Trigger: TGCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGAC...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGCCAGAGCTGCGTTCTaGTTCCCCAGTCGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRARAAF*FPSRVL
Trigger: CAAGACTCGACTGGGGAACCAGAACGCAGCTCTGGC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCCCCCAGGTGTCGGTaGATGCCTGAGCACTCAATG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQAPRCR*MPEHSM
Trigger: CATTGAGTGCTCAGGCATCCACCGACACCTGGGGGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCCATCAGGCCCTGGCTTaGAGTAGCCACCCAAGGCCC +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFHQALA*SSHPRP
Trigger: GGGCCTTGGGTGGCTACTCCAAGCCAGGGCCTGATG...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCAGGCATCAGGCCCTaGCTTGGAGTAGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQAGIRP*LGVATQ
Trigger: TTGGGTGGCTACTCCAAGCCAGGGCCTGATGCCTGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGCTTCTGTTCATACTTaGCCCGTATCCAGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTASVHT*PVSSVP
Trigger: AGGAACGCTGGATACGGGCCAAGTATGAACAGAAGC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCGTTGGCCATGGCACTaGAGAGATGTAGAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRRWPWH*RDVEPS
Trigger: GGACGGCTCTACATCTCTCCAGTGCCATGGCCAACG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGTTAAACCAATCACAGGGGGATTCGCAGCGCTaGTGGCATCCTGCGTGCCCA +
Preference number: 4 (lower is better)
Translates to: QRGEAQEKMAKPLLNQSQGDSQR*WHPACP
Trigger: TGGGCACGCAGGATGCCATCAGCGCTGCGAATCCCC...CTGTGATTGGTTTAACAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp CCTTTGTTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCCATTCGTGGCCTGGTTaGTGTGCACGGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: PLLNQSQRWVESMNFPLGHSWPG*CARPGW
Trigger: CCATCCCGGCCGTGCACATCAACCAGGCCACGAATG...GCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAACAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCCACGTCTGCCCAGTaGGGGACACCACCACAAATT +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQATSAQ*GTPPQI
Trigger: AATTTGTGGTGGTGTCCCTCACTGGGCAGACGTGGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATGTGTCGGTGGATGCCTaGGCACTCAATGCACATCAG +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNVSVDA*ALNAHQ
Trigger: CTGATGTGCATTGAGTGCTCAGGCATCCACCGACAC...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCATGGCGTTGCGGAAGCTaGAGAGACGCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSWRCGS*RDAGSS
Trigger: ACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCA...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGCGCTGATGGCATCCTaGGTGCCCACAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFALMAS*VPTSTM
Trigger: CATGGTGCTTGTGGGCACGCAGGATGCCATCAGCGC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAGGGGGCATGTCCAGAGGTGCTGTGTGTCACCAACTGGTCTTCTAATTTGGAAGCGCTGATGGCATCCTaGGTGCCCACAAGCACCATG +
Preference number: 4 (lower is better)
Translates to: QGACPEVLCVTNWSSNLEALMAS*VPTSTM
Trigger: CATGGTGCTTGTGGGCACGCAGGATGCCATCAGCGC...TTCCAAATTAGAAGACCAGTTGGTGACACACAGCACCTCTGGACATGCCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGATCTGTGGAGAGCTTaGGGGCTCTGCTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQDLWRA*GLCCRR
Trigger: TCGACGACAGCAGAGCCCGCAAGCTCTCCACAGATC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGCGCCAAATCCTCGATaGGCTCGATCAGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRAPNPR*ARSGRR
Trigger: TCTACGACCTGATCGAGCGCATCGAGGATTTGGCGC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCTCCCGGATCTGGTTCTaGAGCGCCAAATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSSRIWF*SAKSSM
Trigger: CATCGAGGATTTGGCGCTGCAGAACCAGATCCGGGA...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTCCCGGATCTGGTTCTaGAGCGCCAAATCCTCGATG +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLSRIWF*SAKSSM
Trigger: CATCGAGGATTTGGCGCTGCAGAACCAGATCCGGGA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCACGATGCTGTCCACCTTaGACTCGGCAGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSRCCPP*TRQPSS
Trigger: AGAAGAAGGCTGCCGAGTGCAAGGTGGACAGCATCG...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCGATGCTGTCCACCTTaGACTCGGCAGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNRCCPP*TRQPSS
Trigger: AGAAGAAGGCTGCCGAGTGCAAGGTGGACAGCATCG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCGATGCTGTCCACCTTaGACTCGGCAGCCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRRCCPP*TRQPSS
Trigger: AGAAGAAGGCTGCCGAGTGCAAGGTGGACAGCATCG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACGCGGCCGCTCCCGATaGTGTCCACCTTGCACTCGG +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPARGRSR*CPPCTR
Trigger: CCGAGTGCAAGGTGGACAGCATCGGGAGCGGCCGCG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCACCTTGTTCAGGGACTTaGCGCTCCGCTTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSPCSGT*RSALAG
Trigger: TCCTGCTAAAGCGGAGCGGCAAGTCCCTGAACAAGG...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCCCTTGTTCAGGGACTTaGCGCTCCGCTTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLPCSGT*RSALAG
Trigger: TCCTGCTAAAGCGGAGCGGCAAGTCCCTGAACAAGG...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGTTGAAGCCTCGAAGTaGCACGTCTGCCCAGTGAGG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIVEASK*HVCPVR
Trigger: CCTCACTGGGCAGACGTGGCACTTCGAGGCTTCAAC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCTGCCTGAGCACTCAATaGACATCAGGGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSCLSTQ*TSGHPG
Trigger: ACCTGGGTGCCCTGATGTGCATTGAGTGCTCAGGCA...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTGCCTGAGCACTCAATaGACATCAGGGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLCLSTQ*TSGHPG
Trigger: ACCTGGGTGCCCTGATGTGCATTGAGTGCTCAGGCA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCATGCCTGAGCACTCAATaGACATCAGGGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSCLSTQ*TSGHPG
Trigger: ACCTGGGTGCCCTGATGTGCATTGAGTGCTCAGGCA...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCTGGATCAAGATGTCTaGACACTCCTGGCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLILDQDV*TLLAAG
Trigger: GCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATTCCCCAGGGCAGCCATaGTGGATCAAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNSPGQP*WIKMSA
Trigger: TGCAGACATCTTGATCCAGCATGGCTGCCCTGGGGA...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCTCCCCAGGGCAGCCATaGTGGATCAAGATGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSSPGQP*WIKMSA
Trigger: TGCAGACATCTTGATCCAGCATGGCTGCCCTGGGGA...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAAGGCTAGGACTACGGTaGAGCTCAGCAGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQRLGLR*SSAEGL
Trigger: CAACCCCTCTGCTGAGCTGCACCGTAGTCCTAGCCT...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCAGGCTAGGACTACGGTaGAGCTCAGCAGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIRLGLR*SSAEGL
Trigger: CAACCCCTCTGCTGAGCTGCACCGTAGTCCTAGCCT...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAATGTCTGTTCCCACAGTaGCTGCAGGGAGGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQCLFPQ*LQGGGS
Trigger: AGACCCTCCTCCCTGCAGGCACTGTGGGAACAGACA...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGCACCCCCAACTTGGTaGCGTCCTCTTCCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRAPPTW*RPLPVS
Trigger: TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGC...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCGCACCCCCAACTTGGTaGCGTCCTCTTCCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSAPPTW*RPLPVS
Trigger: TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGC...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCCTCTCCACTGCCGGCTaGAGCAGTGCTCTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLLSTAG*SSALLK
Trigger: TTTTAGGAGAGCACTGCTGCAGCCGGCAGTGGAGAG...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463381.5
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAATTCAAACGACTCCTCTaGCTCTGTGCCCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQFKRLL*LCAPTQ
Trigger: CTGGGTGGGGGCACAGAGGCAGAGGAGTCGTTTGAA...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463381.5
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGTTCTGGGCCACGTCCTaGAAGACACGCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRFWATS*KTRSTL
Trigger: CAATGTGGAGCGTGTCTTCCAGGACGTGGCCCAGAA...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTTGTTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCAGATGCGCAGCTCCCGCTaGCTGATGCTGGGGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FVKPITAVGGKHEFSPRQMRSSR*LMLGVE
Trigger: CTCCACCCCCAGCATCAGCCAGCGGGAGCTGCGCAT...CTGCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGGGCTGTGGCAGGTGTaGCTCGGGGCAGGCGCTTCC +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPGLWQV*LGAGAS
Trigger: GGAAGCGCCTGCCCCGAGCCACACCTGCCACAGCCC...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGTCGAGTCTTGTCCTTaGCACTGCGGCAGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIVESCP*HCGSLA
Trigger: TGCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGAC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGTGGCCCAGTCTGGATTaGGTGCATCGCAGTCGATAC +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRWPSLD*VHRSRY
Trigger: GTATCGACTGCGATGCACCCAATCCAGACTGGGCCA...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCCCAGGGCAGCCATGCTaGATCAAGATGTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLPGQPC*IKMSAH
Trigger: GTGTGCAGACATCTTGATCCAGCATGGCTGCCCTGG...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCCAGGGCAGCCATGCTaGATCAAGATGTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRPGQPC*IKMSAH
Trigger: GTGTGCAGACATCTTGATCCAGCATGGCTGCCCTGG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCAGGGCAGCCATGCTaGATCAAGATGTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNPGQPC*IKMSAH
Trigger: GTGTGCAGACATCTTGATCCAGCATGGCTGCCCTGG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCAGGGGTTGGTGCCATTaGCAGGCTCTCTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPRGWCH*QALCWG
Trigger: CCCCCAACAGAGAGCCTGCCAATGGCACCAACCCCT...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACCAGCACCCCCAACTTaGTGCCGTCCTCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQPAPPT*CRPLPV
Trigger: AACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCATGGGCCTGCACACTCTaGACCCACAGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAWACTL*THSSRS
Trigger: GGAGCGGGAGCTGTGGGTTCAGAGTGTGCAGGCCCA...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGTGTCGGTGGATGCCTaGGCACTCAATGCACATCAG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQVSVDA*ALNAHQ
Trigger: CTGATGTGCATTGAGTGCTCAGGCATCCACCGACAC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCCTTCCTGTTTCAGGATaGAGGCGTGTGAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFLPVSG*RRVRGW
Trigger: CCAGCCCCTCACACGCCTTCATCCTGAAACAGGAAG...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCTGGCGTTGCGGAAGCTaGAGAGACGCAGGAAGTAGT +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIWRCGS*RDAGSS
Trigger: ACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCA...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCGATGGCCAGTTGCTaGTTCTTTCGCAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIPMASC*FFRKAT
Trigger: AGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAAGGGGGCGCTCAGAGTaGAGGGATGCGCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPRGRSE*RDALLA
Trigger: GGCCAGCAGCGCATCCCTGCACTCTGAGCGCCCCCT...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAACGGTGCGGACGGCCTaGACAGCCAGAGCTGCGTTC +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPATVRTA*TARAAF
Trigger: GAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGT...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGCCAGTCTGGATTGGGTaGATCGCAGTCGATACAAAA +
Preference number: 4 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQPVWIG*IAVDTK
Trigger: TTTTGTATCGACTGCGATGCACCCAATCCAGACTGG...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACTCTTTGGAGCCATGTaGCAGGAGCATCACCAACAG +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSLFGAM*QEHHQQ
Trigger: CTGTTGGTGATGCTCCTGGCACATGGCTCCAAAGAG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCTCTTTGGAGCCATGTaGCAGGAGCATCACCAACAG +
Preference number: 4 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRLFGAM*QEHHQQ
Trigger: CTGTTGGTGATGCTCCTGGCACATGGCTCCAAAGAG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCTCTTTGGAGCCATGTaGCAGGAGCATCACCAACAG +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNLFGAM*QEHHQQ
Trigger: CTGTTGGTGATGCTCCTGGCACATGGCTCCAAAGAG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATTACCAGATGAGCAGCTaGGTGAAGACAACGTTGGCC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNYQMSS*VKTTLA
Trigger: GGCCAACGTTGTCTTCACGCAGCTGCTCATCTGGTA...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTACCAGATGAGCAGCTaGGTGAAGACAACGTTGGCC +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLYQMSS*VKTTLA
Trigger: GGCCAACGTTGTCTTCACGCAGCTGCTCATCTGGTA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACTGCACACTCCTGGCTaGCGGCCCGGCGAGCATATG +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPALHTPG*RPGEHM
Trigger: CATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCAGGCTAGGACTACGGTaGAGCTCAGCAGAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFRLGLR*SSAEGL
Trigger: CAACCCCTCTGCTGAGCTGCACCGTAGTCCTAGCCT...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCTCATCCCTCTCTGCTaGAGCTCAAATCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNLIPLC*SSNPQL
Trigger: GAGTTGGGGATTTGAGCTGCAGCAGAGAGGGATGAG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCACCCCCAACTTGGTaGCGTCCTCTTCCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQAPPTW*RPLPVS
Trigger: TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCTTCTGGGCCACGTCCTaGAAGACACGCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIFWATS*KTRSTL
Trigger: CAATGTGGAGCGTGTCTTCCAGGACGTGGCCCAGAA...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAAAGGCCACTACCTTCTaGGCCACGTCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQKATTF*ATSWKT
Trigger: TGTCTTCCAGGACGTGGCCCAGAAGGTAGTGGCCTT...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCGCCATTCGTGGCCTaGTTGATGTGCACGGCCGGG +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAPPFVA*LMCTAG
Trigger: CCCGGCCGTGCACATCAACCAGGCCACGAATGGCGG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGTTAAACCAATCACAGTGGAGGAGGCAGCGATaGTCTCGATGCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: QRGEAQEKMAKPLLNQSQWRRQR*SRCAAP
Trigger: GGGAGCTGCGCATCGAGACCATCGCTGCCTCCTCCA...CTGTGATTGGTTTAACAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp AAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCTGTGTGTCACCAACTaGTCTTCTAATTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: KRPCTLSSSWGRVHPNADLCVTN*SSNLEG
Trigger: TCCTTCCAAATTAGAAGACCAGTTGGTGACACACAG...ATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCGCCTGGAAGTTCATaGCTTCGGAGCCGTGGGGCC +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAPPGSS*LRSRGA
Trigger: GGCCCCACGGCTCCGAAGCCATGAACTTCCAGGCGG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397238.7
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAGGGGCAGGGAAGTGGTaGCCTCACTCCACTGGTCGG +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAGAGKW*PHSTGR
Trigger: CCGACCAGTGGAGTGAGGCCACCACTTCCCTGCCCC...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGCCAGAGCTGCGTTCTaGTTCCCCAGTCGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFARAAF*FPSRVL
Trigger: CAAGACTCGACTGGGGAACCAGAACGCAGCTCTGGC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCCGTTGGCCATGGCACTaGAGAGATGTAGAGCCGTCC +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFRWPWH*RDVEPS
Trigger: GGACGGCTCTACATCTCTCCAGTGCCATGGCCAACG...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAATGTCTGCACACTCCTaGCTGCCGGCCCGGCGAGCA +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAMSAHS*LPARRA
Trigger: TGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACAT...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACCTGTCCCTTTTCAATaGCACCTTAGGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQPVPFQ*HLRAEG
Trigger: GCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCCCAGCACCCCCAACTTaGTGCCGTCCTCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFPAPPT*CRPLPV
Trigger: AACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGG...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp GGAAGGAGTTGGAAAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTGGCACATGGGCGAGTTGGGCAGTaGCTTGCAGGGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: GRSWKGLFVDEKLETVAHGRVGQ*LAGPDG
Trigger: GCCATCGGGCCCTGCAAGTCACTGCCCAACTCGCCC...ATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAGGGGGTGGAGGGGACTaGGGACGAGTAGTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAGGGGD*GRVVAE
Trigger: TTCAGCGACTACTCGTCCTCAGTCCCCTCCACCCCC...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAGCTTGGGGCTGGAACTaGGTACCTCAGCTGGGCCAC +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAAWGWN*VPQLGH
Trigger: GTGGCCCAGCTGAGGTACTCAGTTCCAGCCCCAAGC...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR TCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACAGGATGAAGGCGTGTaGGGGGCTGGCACTAGGAGG +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAQDEGV*GAGTRR
Trigger: CCTCCTAGTGCCAGCCCCTCACACGCCTTCATCCTG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGGAGCCGCCAGGCTCTaGTGCTGCTGCGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFGAARL*CCCGLC
Trigger: GCAGAGCCCGCAGCAGCAGCAGAGCCTGGCGGCTCC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397238.7
CDS-3UTR GCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCGCGCCAAATCCTCGATaGGCTCGATCAGGTCGTAGA +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPAPNPR*ARSGRR
Trigger: TCTACGACCTGATCGAGCGCATCGAGGATTTGGCGC...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACTCTTTTTCCTCCGGTaGTTCTTCCGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQLFFLR*FFRLEW
Trigger: CCACTCCAACCGGAAGAAGCACCGGAGGAAAAAGAG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCTCTTTTTCCTCCGGTaGTTCTTCCGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLILFFLR*FFRLEW
Trigger: CCACTCCAACCGGAAGAAGCACCGGAGGAAAAAGAG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAATACCAGATGAGCAGCTaGGTGAAGACAACGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQYQMSS*VKTTLA
Trigger: GGCCAACGTTGTCTTCACGCAGCTGCTCATCTGGTA...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCTCATCCCTCTCTGCTaGAGCTCAAATCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLILIPLC*SSNPQL
Trigger: GAGTTGGGGATTTGAGCTGCAGCAGAGAGGGATGAG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACTCATCCCTCTCTGCTaGAGCTCAAATCCCCAACTC +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQLIPLC*SSNPQL
Trigger: GAGTTGGGGATTTGAGCTGCAGCAGAGAGGGATGAG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCGCACCCCCAACTTGGTaGCGTCCTCTTCCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPAPPTW*RPLPVS
Trigger: TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGC...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAPWAPR*RCGSCR
Trigger: TCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAGGGGGCATGTCCAGAGGTGCTGTGTGTCACCAACTGGTCTTCTAATTTGGAATTCTGGGCCACGTCCTaGAAGACACGCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: QGACPEVLCVTNWSSNLEFWATS*KTRSTL
Trigger: CAATGTGGAGCGTGTCTTCCAGGACGTGGCCCAGAA...TTCCAAATTAGAAGACCAGTTGGTGACACACAGCACCTCTGGACATGCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp CAGGGGGCATGTCCAGAGGTGCTGTGTGTCACCAACTGGTCTTCTAATTTGGAAAAGGCCACTACCTTCTaGGCCACGTCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: QGACPEVLCVTNWSSNLEKATTF*ATSWKT
Trigger: TGTCTTCCAGGACGTGGCCCAGAAGGTAGTGGCCTT...TTCCAAATTAGAAGACCAGTTGGTGACACACAGCACCTCTGGACATGCCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCAAGGCCACTACCTTCTaGGCCACGTCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPKATTF*ATSWKT
Trigger: TGTCTTCCAGGACGTGGCCCAGAAGGTAGTGGCCTT...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAACACGGCCGAGTGGCTaGGCGAGTTGGGCAGTGACT +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPATRPSG*ASWAVT
Trigger: AGTCACTGCCCAACTCGCCCAGCCACTCGGCCGTGT...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCATGGAGGAGGCAGCGATaGTCTCGATGCGCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAWRRQR*SRCAAP
Trigger: GGGAGCTGCGCATCGAGACCATCGCTGCCTCCTCCA...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTTCCCTGGGGGTGGGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGCTGTGTGTCACCAACTaGTCTTCTAATTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: PSLGVGLVTKVPVGLWSGLCVTN*SSNLEG
Trigger: TCCTTCCAAATTAGAAGACCAGTTGGTGACACACAG...CCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCCCACCCCCAGGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCAGATGGCGTAGATATTaGGATGCACGGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSRWRRY*DARTRS
Trigger: GCTTCGAGTCCGTGCATCCCAATATCTACGCCATCT...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACCTCAGCTGGGCCACTaGCAGGGTGCTGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPPQLGH*QGAACL
Trigger: CAGGCATGCAGCACCCTGCCAGTGGCCCAGCTGAGG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATAGACAACGTTGGCCATaGCACTGGAGAGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNRQRWP*HWRDVE
Trigger: CTCTACATCTCTCCAGTGCCATGGCCAACGTTGTCT...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAGACAACGTTGGCCATaGCACTGGAGAGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSRQRWP*HWRDVE
Trigger: CTCTACATCTCTCCAGTGCCATGGCCAACGTTGTCT...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCGAGCATATGCCAGTaGAGTCAGGCCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPASICQ*SQAPGV
Trigger: GACGCCCGGGGCCTGACTCCACTGGCATATGCTCGC...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCCCTGTCCCTTTTCAATaGCACCTTAGGGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFPVPFQ*HLRAEG
Trigger: GCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGG...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTGTACAAAGTTTACATaGGACTCACAGATCACCCCT +
Preference number: 4 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTCTKFT*DSQITP
Trigger: AGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTTTCATCCTCCAGGCTaGACACAAACACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLFHPPG*TQTPLH
Trigger: ATGCAGTGGTGTTTGTGTTCAGCCTGGAGGATGAAA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCATTTCATCCTCCAGGCTaGACACAAACACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSFHPPG*TQTPLH
Trigger: ATGCAGTGGTGTTTGTGTTCAGCCTGGAGGATGAAA...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGGGCGAGTTGGGCAGTaGCTTGCAGGGCCCGATGGC +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFGRVGQ*LAGPDG
Trigger: GCCATCGGGCCCTGCAAGTCACTGCCCAACTCGCCC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACATTCGTGGCCTGGTTaGTGTGCACGGCCGGGATGG +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPHSWPG*CARPGW
Trigger: CCATCCCGGCCGTGCACATCAACCAGGCCACGAATG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGGGGGTGGAGGGGACTaGGGACGAGTAGTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPGGGGD*GRVVAE
Trigger: TTCAGCGACTACTCGTCCTCAGTCCCCTCCACCCCC...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACAGGATGAAGGCGTGTaGGGGGCTGGCACTAGGAGG +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPQDEGV*GAGTRR
Trigger: CCTCCTAGTGCCAGCCCCTCACACGCCTTCATCCTG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTTTGTTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCCCGATGGCCAGTTGCTaGTTCTTTCGCAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: PLLNQSQRWVESMNFPLGPMASC*FFRKAT
Trigger: AGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGG...GCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAACAAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR GCA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCTCTTTTTCCTCCGGTaGTTCTTCCGGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPLFFLR*FFRLEW
Trigger: CCACTCCAACCGGAAGAAGCACCGGAGGAAAAAGAG...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR GCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTTGTTGCCGCGGACGGTaGGGACGGCCTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFCCRGR*GRPAQP
Trigger: TGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACA...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACCAGTCTGGATTGGGTaGATCGCAGTCGATACAAAA +
Preference number: 4 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSPVWIG*IAVDTK
Trigger: TTTTGTATCGACTGCGATGCACCCAATCCAGACTGG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCAGATGGCGTAGATATTaGGATGCACGGACTCGAAGC +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIRWRRY*DARTRS
Trigger: GCTTCGAGTCCGTGCATCCCAATATCTACGCCATCT...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCCGATCAGGTCGTAGATaGCGTAGATATTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSRSGRR*RRYWDA
Trigger: TGCATCCCAATATCTACGCCATCTACGACCTGATCG...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGCTTCTGTTCATACTTaGCCCGTATCCAGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIASVHT*PVSSVP
Trigger: AGGAACGCTGGATACGGGCCAAGTATGAACAGAAGC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp GGAAGGAGTTGGAAAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTGGCACATGGGGGTGGAGGGGACTaGGGACGAGTAGTCGCTGAA +
Preference number: 4 (lower is better)
Translates to: GRSWKGLFVDEKLETVAHGGGGD*GRVVAE
Trigger: TTCAGCGACTACTCGTCCTCAGTCCCCTCCACCCCC...ATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTTGGGCCTGCACACTCTaGACCCACAGCTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFWACTL*THSSRS
Trigger: GGAGCGGGAGCTGTGGGTTCAGAGTGTGCAGGCCCA...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCAGTCTGGATTGGGTaGATCGCAGTCGATACAAAA +
Preference number: 4 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIPVWIG*IAVDTK
Trigger: TTTTGTATCGACTGCGATGCACCCAATCCAGACTGG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAACTCCTCTGCCTCTGTaGCCCCACCCAGCTGTGTGT +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPTPLPL*PHPAVC
Trigger: ACACACAGCTGGGTGGGGGCACAGAGGCAGAGGAGT...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463381.5
CDS-3UTR CCA 90 bp CCTTCCCTGGGGGTGGGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGTTGTTGATGAAAAGTTaGAAACAGTGGCACATATCG +
Preference number: 4 (lower is better)
Translates to: PSLGVGLVTKVPVGLWSGLLMKS*KQWHIS
Trigger: CGATATGTGCCACTGTTTCCAACTTTTCATCAACAA...CCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCCCACCCCCAGGGAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp GCAGAGTCCACCCGAATGCGGATCCTAGGAAATAGGGGGAGGCCAAAAAGAGGGCTGTGTGTCACCAACTaGTCTTCTAATTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: AESTRMRILGNRGRPKRGLCVTN*SSNLEG
Trigger: TCCTTCCAAATTAGAAGACCAGTTGGTGACACACAG...CCCTCTTTTTGGCCTCCCCCTATTTCCTAGGATCCGCATTCGGGTGGACTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGGATGGCCGCGGAGTTaGAGAGCGCGAACTGCTGGG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFGWPRS*RARTAG
Trigger: CCCAGCAGTTCGCGCTCTCCAACTCCGCGGCCATCC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAGTCGAGTCTTGTCCTTaGCACTGCGGCAGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAVESCP*HCGSLA
Trigger: TGCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGAC...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAGGCATCAGGCCCTaGCTTGGAGTAGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPAGIRP*LGVATQ
Trigger: TTGGGTGGCTACTCCAAGCCAGGGCCTGATGCCTGC...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCGCTTCTGTTCATACTTaGCCCGTATCCAGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFASVHT*PVSSVP
Trigger: AGGAACGCTGGATACGGGCCAAGTATGAACAGAAGC...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCAGACAACGTTGGCCATaGCACTGGAGAGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFRQRWP*HWRDVE
Trigger: CTCTACATCTCTCCAGTGCCATGGCCAACGTTGTCT...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGCGAGCATATGCCAGTaGAGTCAGGCCCCGGGCGTC +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFASICQ*SQAPGV
Trigger: GACGCCCGGGGCCTGACTCCACTGGCATATGCTCGC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCAGCACCCCCAACTTaGTGCCGTCCTCTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAPAPPT*CRPLPV
Trigger: AACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGTTGTTGATGAAAAGTTaGAAACAGTGGCACATATCT +
Preference number: 4 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKLLMKS*KQWHIS
Trigger: AGATATGTGCCACTGTTTCCAACTTTTCATCAACAA...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479901.5
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGCCACGCACACAGTCTaGTTTATTGGCTCATCATAC +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQATHTV*FIGSSY
Trigger: GTATGATGAGCCAATAAACCAGACTGTGTGCGTGGC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461065.1
ENST00000622464.4
CDS-3UTR TCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCAGGATGAAGGCGTGTaGGGGGCTGGCACTAGGAGG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFQDEGV*GAGTRR
Trigger: CCTCCTAGTGCCAGCCCCTCACACGCCTTCATCCTG...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGATCTGTGGAGAGCTTaGGGGCTCTGCTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPDLWRA*GLCCRR
Trigger: TCGACGACAGCAGAGCCCGCAAGCTCTCCACAGATC...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCGATGGCCAGTTGCTaGTTCTTTCGCAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAPMASC*FFRKAT
Trigger: AGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCATGCCTGAGCACTCAATaGACATCAGGGCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPACLSTQ*TSGHPG
Trigger: ACCTGGGTGCCCTGATGTGCATTGAGTGCTCAGGCA...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCATCCTTCTGGCCCCTCTaGCCTCTTCCTGGGCCTTAT +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPSFWPL*PLPGPY
Trigger: ATAAGGCCCAGGAAGAGGGCAGAGGGGCCAGAAGGA...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGCTTTCGGATGGGTGTaGGGGTGGAGGAGGCAGCGA +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFAFGWV*GWRRQR
Trigger: TCGCTGCCTCCTCCACCCCCACACCCATCCGAAAGC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGGGCAGGCGCTTCCCTaGCACTTTCACCGTTGTCCG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFGQALP*HFHRCP
Trigger: CGGACAACGGTGAAAGTGCCAGGGAAGCGCCTGCCC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCCAGAGCTGCGTTCTaGTTCCCCAGTCGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPARAAF*FPSRVL
Trigger: CAAGACTCGACTGGGGAACCAGAACGCAGCTCTGGC...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCCTCCCAGACGCTGTTaGCGAGGGCATTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFPPRRC*RGHCPW
Trigger: CCATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGG...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCAGGGCAGCCATGCTaGATCAAGATGTCTGCACAC +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAPGQPC*IKMSAH
Trigger: GTGTGCAGACATCTTGATCCAGCATGGCTGCCCTGG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATTGTACAAAGTTTACATaGGACTCACAGATCACCCCT +
Preference number: 4 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNCTKFT*DSQITP
Trigger: AGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGGCTGGGGTGATAGGTaGGCAGCCCGTTGTCACAGA +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFGWGDR*AARCHR
Trigger: TCTGTGACAACGGGCTGCTCACCTATCACCCCAGCC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp AAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTGGCACATATCTGAGAGGGAGGATCTGTGGAGAGCTTaGGGGCTCTGCTGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: KAFLLMKSWKQWHISEREDLWRA*GLCCRR
Trigger: TCGACGACAGCAGAGCCCGCAAGCTCTCCACAGATC...CTCCCTCTCAGATATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACCGATGGCCAGTTGCTaGTTCTTTCGCAAGGCCACT +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPPMASC*FFRKAT
Trigger: AGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCATACCAGATGAGCAGCTaGGTGAAGACAACGTTGGCC +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAYQMSS*VKTTLA
Trigger: GGCCAACGTTGTCTTCACGCAGCTGCTCATCTGGTA...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCATTCTGGGCCACGTCCTaGAAGACACGCTCCACATTG +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPFWATS*KTRSTL
Trigger: CAATGTGGAGCGTGTCTTCCAGGACGTGGCCCAGAA...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GCAGAGTCCACCCGAATGCGGATCCTAGGAAATAGGGGGAGGCCAAAAAGAGGGTTGTTGATGAAAAGTTaGAAACAGTGGCACATATCG +
Preference number: 4 (lower is better)
Translates to: AESTRMRILGNRGRPKRGLLMKS*KQWHIS
Trigger: CGATATGTGCCACTGTTTCCAACTTTTCATCAACAA...CCCTCTTTTTGGCCTCCCCCTATTTCCTAGGATCCGCATTCGGGTGGACTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGTTGGAGTGGGGAGATaGGGGAGGATCCAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFVGVGR*GRIQLG
Trigger: CCCAAGCTGGATCCTCCCCCATCTCCCCACTCCAAC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGGTGCTTCTTCCGGTTaGAGTGGGGAGATGGGGGAG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFGASSG*SGEMGE
Trigger: CTCCCCCATCTCCCCACTCCAACCGGAAGAAGCACC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCATGGCCCAGTCTGGATTaGGTGCATCGCAGTCGATAC +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPWPSLD*VHRSRY
Trigger: GTATCGACTGCGATGCACCCAATCCAGACTGGGCCA...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGCAGGCATCAGGCCCTaGCTTGGAGTAGCCACCCAA +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFAGIRP*LGVATQ
Trigger: TTGGGTGGCTACTCCAAGCCAGGGCCTGATGCCTGC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTAGGGGTTGGTGCCATTaGCAGGCTCTCTGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFRGWCH*QALCWG
Trigger: CCCCCAACAGAGAGCCTGCCAATGGCACCAACCCCT...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAATGTACAAAGTTTACATaGGACTCACAGATCACCCCT +
Preference number: 4 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQCTKFT*DSQITP
Trigger: AGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp TTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCAGTGGGCTGTGTGTCACCAACTaGTCTTCTAATTTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: LNQSQRWVESMNFPLGSGLCVTN*SSNLEG
Trigger: TCCTTCCAAATTAGAAGACCAGTTGGTGACACACAG...CCCACTGCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGCCAGAGCTGCGTTCTaGTTCCCCAGTCGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFARAAF*FPSRVL
Trigger: CAAGACTCGACTGGGGAACCAGAACGCAGCTCTGGC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp GAGGGAGGAACGAGGCAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGTTGTTGATGAAAAGTTaGAAACAGTGGCACATATCT +
Preference number: 4 (lower is better)
Translates to: EGGTRQRGEAQEKMAKPLLLMKS*KQWHIS
Trigger: AGATATGTGCCACTGTTTCCAACTTTTCATCAACAA...CAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTTCCTCCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR TCA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCATTTCATCCTCCAGGCTaGACACAAACACCACTGCAT +
Preference number: 4 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAFHPPG*TQTPLH
Trigger: ATGCAGTGGTGTTTGTGTTCAGCCTGGAGGATGAAA...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR TCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTGTGTCGGTGGATGCCTaGGCACTCAATGCACATCAG +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFVSVDA*ALNAHQ
Trigger: CTGATGTGCATTGAGTGCTCAGGCATCCACCGACAC...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTAAGGCCACTACCTTCTaGGCCACGTCCTGGAAGACA +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFKATTF*ATSWKT
Trigger: TGTCTTCCAGGACGTGGCCCAGAAGGTAGTGGCCTT...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAAGACAACGTTGGCCATaGCACTGGAGAGATGTAGAG +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPRQRWP*HWRDVE
Trigger: CTCTACATCTCTCCAGTGCCATGGCCAACGTTGTCT...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR GCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACCAGTCTGGATTGGGTaGATCGCAGTCGATACAAAA +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPPVWIG*IAVDTK
Trigger: TTTTGTATCGACTGCGATGCACCCAATCCAGACTGG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CCA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCCACGCACACAGTCTaGTTTATTGGCTCATCATAC +
Preference number: 4 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPATHTV*FIGSSY
Trigger: GTATGATGAGCCAATAAACCAGACTGTGTGCGTGGC...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CCA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCGATCAGGTCGTAGATaGCGTAGATATTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFRSGRR*RRYWDA
Trigger: TGCATCCCAATATCTACGCCATCTACGACCTGATCG...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CCA 90 bp AAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTGGCACATATCTGAGAGGGAGAACCAATCACAGCGGTaGGTGGAAAGCATGAATTTT +
Preference number: 4 (lower is better)
Translates to: KAFLLMKSWKQWHISERENQSQR*VESMNF
Trigger: AAAATTCATGCTTTCCACCCACCGCTGTGATTGGTT...CTCCCTCTCAGATATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
3UTR CAA 72 bp TGGTCTTCTAATTTGGAAGGAGTTGGAAAGGCCTTTTaGTTGATGAAAAGTTGGAAACAGTGGCACATATCT +
Preference number: 4 (lower is better)
Translates to: WSSNLEGVGKAF*LMKSWKQWHIS
Trigger: AGATATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTCCAAATTAGAAGACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS CCA 90 bp CGCGGCGGCCGGGCCAGCAGCCCTGACTCGGAGCGCCGCACCTCCTaGCCGCGGCGCAGGCGGAAGCTGAAGCTCTTCCTGAGCGCCGCC +
Preference number: 5 (lower is better)
Translates to: RGGRASSPDSERRTS*PRRRRKLKLFLSAA
Trigger: GGCGGCGCTCAGGAAGAGCTTCAGCTTCCGCCTGCGCCGCGGCCAGGAGGTGCGGCGCTCCGAGTCAGGGCTGCTGGCCCGGCCGCCGCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS CCA 90 bp CGCGCAAGGACCCCCGACAGGGAGAGCATGGCCAGGCACGGCCTGTaGAGCCCTCGGCCGGCGCCGGAGAGGCCACTGCGCCCCGGCTCC +
Preference number: 5 (lower is better)
Translates to: RARTPDRESMARHGL*SPRPAPERPLRPGS
Trigger: GGAGCCGGGGCGCAGTGGCCTCTCCGGCGCCGGCCGAGGGCTCCACAGGCCGTGCCTGGCCATGCTCTCCCTGTCGGGGGTCCTTGCGCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469901.5
CDS CCA 90 bp GTGGCCTGGTCCTCAAGCGCGCAAGGACCCCCGACAGGGAGAGCATaGCCAGGCACGGCCTGTGGAGCCCTCGGCCGGCGCCGGAGAGGC +
Preference number: 5 (lower is better)
Translates to: VAWSSSAQGPPTGRA*PGTACGALGRRRRG
Trigger: GCCTCTCCGGCGCCGGCCGAGGGCTCCACAGGCCGTGCCTGGCCATGCTCTCCCTGTCGGGGGTCCTTGCGCGCTTGAGGACCAGGCCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469901.5
CDS CCA 90 bp ACGAGGGTCGGTGTCGGCGTCGGCATGCGGCAGCGGGACGCGGGCTaGGTGGGCACCGTCCGCGAGCTCCTGCGTGTGGGCGCTGTCATT +
Preference number: 5 (lower is better)
Translates to: TRVGVGVGMRQRDAG*VGTVRELLRVGAVI
Trigger: AATGACAGCGCCCACACGCAGGAGCTCGCGGACGGTGCCCACCCAGCCCGCGTCCCGCTGCCGCATGCCGACGCCGACACCGACCCTCGT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467250.1
CDS-3UTR CAA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAGGCACCTCGCTGGCGTaGCGGAAGCTGCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: RGGKASAAAAAASGAGAGGTSLA*RKLQRR
Trigger: GCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCC...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGACGGATGGCCGCGGAGTaGGAGAGCGCGAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: RGGKASAAAAAASGAGAGRMAAE*ESANCW
Trigger: CCAGCAGTTCGCGCTCTCCAACTCCGCGGCCATCCG...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp TCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTACCCTCTGTGTCGCCTaGGGCAAACAGCCTTCCGGC +
Preference number: 5 (lower is better)
Translates to: SQGPARLRPRTGGMSRGATLCVA*GKQPSG
Trigger: GCCGGAAGGCTGTTTGCCCAAGGCGACACAGAGGGT...AGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS CCA 90 bp GCGGGCTCTCTTGGGCCGGCGAGAATCGGGCGCGGGGCTCAGGGCTaGCCCACGAACTCATCTTCTGTGTGTCCTGTCTCCCCGGCCCCC +
Preference number: 5 (lower is better)
Translates to: AGSLGPARIGRGAQG*PTNSSSVCPVSPAP
Trigger: GGGGGCCGGGGAGACAGGACACACAGAAGATGAGTTCGTGGGCCAGCCCTGAGCCCCGCGCCCGATTCTCGCCGGCCCAAGAGAGCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000483971.1
CDS-3UTR CAA 90 bp CCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCTGTAGATCTGTGGAGAGCTaGCGGGCTCTGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: PGPGPPPAPHRGHVQRCCRSVES*RALLSS
Trigger: CGACGACAGCAGAGCCCGCAAGCTCTCCACAGATCT...ACAGCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp AGAGGGGGCAAGGCAAGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAGAGTTGGGCAGTGACTaGCAGGGCCCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: RGGKASAAAAAASGAGAGELGSD*QGPMAS
Trigger: ACTGGCCATCGGGCCCTGCAAGTCACTGCCCAACTC...TCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCTTGCCTTGCCCCCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS CCA 90 bp GATGTCTGCACACTCCTGGCTGCCGGCCCGGCGAGCATATGCCAGTaGAGTCAGGCCCCGGGCGTCCCGGCTCCTCACGTCCACCCCGTA +
Preference number: 5 (lower is better)
Translates to: DVCTLLAAGPASICQ*SQAPGVPAPHVHPV
Trigger: TACGGGGTGGACGTGAGGAGCCGGGACGCCCGGGGCCTGACTCCACTGGCATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS-3UTR CAA 90 bp AGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCAGAGGTCCATGGGCCCGATGGCCAGTaGCTGCTTCTTTCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: SAAAAAASGAGAGTAEVHGPDGQ*LLLSQG
Trigger: GCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCCC...ATGGACCTCTGCCGTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGGGGCCCGATGGCCAGTaGCTGCTTCTTTCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: WPVCGTDTTRHVAPSASAGPDGQ*LLLSQG
Trigger: GCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCCC...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGAGTTGGGCAGTGACTaGCAGGGCCCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: ARLRHRHHTARGTERVGVELGSD*QGPMAS
Trigger: ACTGGCCATCGGGCCCTGCAAGTCACTGCCCAACTC...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp GTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCGAGTTGGGCAGTGACTaGCAGGGCCCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VCGTDTTRHVAPSASAWPELGSD*QGPMAS
Trigger: ACTGGCCATCGGGCCCTGCAAGTCACTGCCCAACTC...GGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCCAAGGGCCATTCGTGGCCTGGTaGATGTGCACGGCCGGGATG +
Preference number: 5 (lower is better)
Translates to: RHRHHTARGTERVGVAQGPFVAW*MCTAGM
Trigger: CATCCCGGCCGTGCACATCAACCAGGCCACGAATGG...CCCTTGGGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS GCA 90 bp CCCCCATGCATCGTTGCCCGGGACTTCCTGCTCTCTGCCAGCTCCTaGAGGGCCCCGCCTCACCCTGCGTGCCCACAAGCACCATGGGCA +
Preference number: 5 (lower is better)
Translates to: PPCIVARDFLLSASS*RAPPHPACPQAPWA
Trigger: TGCCCATGGTGCTTGTGGGCACGCAGGGTGAGGCGGGGCCCTGCAGGAGCTGGCAGAGAGCAGGAAGTCCCGGGCAACGATGCATGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS-3UTR CAA 90 bp GCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGAGATCTGTGGAGAGCTaGCGGGCTCTGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: ARLRHRHHTARGTERVGVRSVES*RALLSS
Trigger: CGACGACAGCAGAGCCCGCAAGCTCTCCACAGATCT...CACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGAGATCTGTGGAGAGCTaGCGGGCTCTGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: WPVCGTDTTRHVAPSASARSVES*RALLSS
Trigger: CGACGACAGCAGAGCCCGCAAGCTCTCCACAGATCT...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCACATATCGTGAAGATGTaGGAGCGCCGCTTGGACTGC +
Preference number: 5 (lower is better)
Translates to: ESSPRARPASGPAQGACPHIVKM*ERRLDC
Trigger: GCAGTCCAAGCGGCGCTCCAACATCTTCACGATATG...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS GCA 90 bp CCCCAGGGCAGCCATGCTGGATCAAGATGTCTGCACACTCCTGGCTaGCGGCCCGGCGAGCATATGCCAGTGGAGTCAGGCCCCGGGCGT +
Preference number: 5 (lower is better)
Translates to: PQGSHAGSRCLHTPG*RPGEHMPVESGPGR
Trigger: ACGCCCGGGGCCTGACTCCACTGGCATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGCTGCCCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CCA 90 bp CCCTCCCCAGGGCAGCCATGCTGGATCAAGATGTCTGCACACTCCTaGCTGCCGGCCCGGCGAGCATATGCCAGTGGAGTCAGGCCCCGG +
Preference number: 5 (lower is better)
Translates to: PSPGQPCWIKMSAHS*LPARRAYASGVRPR
Trigger: CCGGGGCCTGACTCCACTGGCATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGCTGCCCTGGGGAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CCA 90 bp AGCTCCTGCAGGGCCCCGCCTCACCCTGCGTGCCCACAAGCACCATaGGCACCTCGCTGGCGTTGCGGAAGCTGCAGAGACGCAGGAAGT +
Preference number: 5 (lower is better)
Translates to: SSCRAPPHPACPQAP*APRWRCGSCRDAGS
Trigger: ACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCACGCAGGGTGAGGCGGGGCCCTGCAGGAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS-3UTR CAA 90 bp AGCGCGGCGGCGGCGGCGGCTTCCGGAGCAGGAGCAGGAACGGCAGAGGTCCATATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGT +
Preference number: 5 (lower is better)
Translates to: SAAAAAASGAGAGTAEVHMLERR*DCFRMG
Trigger: ACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACAT...ATGGACCTCTGCCGTTCCTGCTCCTGCTCCGGAAGCCGCCGCCGCCGCCGCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CAA 90 bp GAGGCCAGAAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGACGGATGGCCGCGGAGTaGGAGAGCGCGAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: EARRGPAPCQAPGAESTRRMAAE*ESANCW
Trigger: CCAGCAGTTCGCGCTCTCCAACTCCGCGGCCATCCG...TCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTTCTGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000473312.5
ENST00000479901.5
CDS TCA 90 bp GCGAGGGCACGGGGCTGTCTCCTCCATGCCACTGCCGCTCCCAGGTaGGGGATGTCAGGGACAGGAACGGGACAGGACAGCGTCTTCTCG +
Preference number: 5 (lower is better)
Translates to: ARARGCLLHATAAPR*GMSGTGTGQDSVFS
Trigger: CGAGAAGACGCTGTCCTGTCCCGTTCCTGTCCCTGACATCCCTCACCTGGGAGCGGCAGTGGCATGGAGGAGACAGCCCCGTGCCCTCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467250.1
CDS GCA 90 bp GGGCGCTGTCATTACAGGAGCGAGGGCACGGGGCTGTCTCCTCCATaGCACTGCCGCTCCCAGGTGAGGGATGTCAGGGACAGGAACGGG +
Preference number: 5 (lower is better)
Translates to: GRCHYRSEGTGLSPP*HCRSQVRDVRDRNG
Trigger: CCCGTTCCTGTCCCTGACATCCCTCACCTGGGAGCGGCAGTGGCATGGAGGAGACAGCCCCGTGCCCTCGCTCCTGTAATGACAGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467250.1
CDS GCA 90 bp AAACGAGTCGAGGCTGATTGGCCGAGGAGTCCGCCCAGGCCCAGCTaGTCCTCGCTTACAGCGTCCCGCCTTCAGTGCGGCATAGGCTCC +
Preference number: 5 (lower is better)
Translates to: KRVEADWPRSPPRPS*SSLTASRLQCGIGS
Trigger: GGAGCCTATGCCGCACTGAAGGCGGGACGCTGTAAGCGAGGAGCAGCTGGGCCTGGGCGGACTCCTCGGCCAATCAGCCTCGACTCGTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490097.5
CDS CCA 90 bp AGTGTGGGAAGAAGGGAGGCAGAGGAGGGGAGGGGCGCAGGGCACTaGGAGGAGGAGAGGACCAGTCCTGCCAACTGTAGCTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: SVGRREAEEGRGAGH*EEERTSPANCSWAT
Trigger: TGTGGCCCAGCTACAGTTGGCAGGACTGGTCCTCTCCTCCTCCCAGTGCCCTGCGCCCCTCCCCTCCTCTGCCTCCCTTCTTCCCACACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 90 bp GCCCCGCCTCACCCTGCGTGCCCACAAGCACCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGAGACGCAGGAAGTAGTTGTACACCG +
Preference number: 5 (lower is better)
Translates to: APPHPACPQAPWAPR*RCGSCRDAGSSCTP
Trigger: CGGTGTACAACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCACGCAGGGTGAGGCGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS-3UTR CAA 90 bp CCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCCTAGGAGGCACCTCGCTGGCGTaGCGGAAGCTGCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: PAPCQAPGAESTRMRILGGTSLA*RKLQRR
Trigger: GCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCC...TCCTAGGATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGACCATTCGTGGCCTGGTaGATGTGCACGGCCGGGATG +
Preference number: 5 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRPFVAW*MCTAGM
Trigger: CATCCCGGCCGTGCACATCAACCAGGCCACGAATGG...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CAA 90 bp GTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCAACTGGTCTTCTAATTaGGAAGGAGTTGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: VPGPGPPPAPHRGHVQRCNWSSN*EGVGKA
Trigger: GGCCTTTCCAACTCCTTCCAAATTAGAAGACCAGTT...GCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS GCA 90 bp AAAGCTGTTGCCGCGGACGGTGCGGACGGCCTGCACAGCCAGAGCTaGGTTCTGGTTCCCCAGTCGAGTCTTGTCCTTGGCACTGCGGCA +
Preference number: 5 (lower is better)
Translates to: KAVAADGADGLHSQS*VLVPQSSLVLGTAA
Trigger: TGCCGCAGTGCCAAGGACAAGACTCGACTGGGGAACCAGAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 90 bp CGGGCCAGCTTCTGGGAGAGCCAGAGGCTGCGCAGGGACCCTGTGTaGCTTAGGAAGCAGCCTGTCCCCAGATCTTCACGGTCCACAGCT +
Preference number: 5 (lower is better)
Translates to: RASFWESQRLRRDPV*LRKQPVPRSSRSTA
Trigger: AGCTGTGGACCGTGAAGATCTGGGGACAGGCTGCTTCCTAAGGCACACAGGGTCCCTGCGCAGCCTCTGGCTCTCCCAGAAGCTGGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478320.1
CDS-3UTR CAA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCGGCACCTCGCTGGCGTaGCGGAAGCTGCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTGTSLA*RKLQRR
Trigger: GCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCC...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCCCCGCTCCTCCGCCGTaGAAGCCTCGAAGTGCCACG +
Preference number: 5 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTPAPPP*KPRSAT
Trigger: CGTGGCACTTCGAGGCTTCAACGGCGGAGGAGCGGG...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS TCA 90 bp GAGCGCTCACTGCAGGTGAGTGCCAAGCCGGAAGCGGGCTCCTGTTaGAGGCCTATACTCTCCCTGGCTGTATCCGCTTGGCTCCCTCCC +
Preference number: 5 (lower is better)
Translates to: ERSLQVSAKPEAGSC*RPILSLAVSAWLPP
Trigger: GGGAGGGAGCCAAGCGGATACAGCCAGGGAGAGTATAGGCCTTCAACAGGAGCCCGCTTCCGGCTTGGCACTCACCTGCAGTGAGCGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS GCA 90 bp TGTCATTACAGGAGCGAGGGCACGGGGCTGTCTCCTCCATGCCACTaGCGCTCCCAGGTGAGGGATGTCAGGGACAGGAACGGGACAGGA +
Preference number: 5 (lower is better)
Translates to: CHYRSEGTGLSPPCH*RSQVRDVRDRNGTG
Trigger: TCCTGTCCCGTTCCTGTCCCTGACATCCCTCACCTGGGAGCGGCAGTGGCATGGAGGAGACAGCCCCGTGCCCTCGCTCCTGTAATGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467250.1
CDS GCA 90 bp CCACACTCAGGAGAGCCAGACGGACACCTCTCTCTAGGCGAGGTCTaGCTGGGCTTCCCAGTCCCAAAGCTCCCCAGCCTTGGAGGAGGA +
Preference number: 5 (lower is better)
Translates to: PHSGEPDGHLSLGEV*LGFPVPKLPSLGGG
Trigger: TCCTCCTCCAAGGCTGGGGAGCTTTGGGACTGGGAAGCCCAGGCAGACCTCGCCTAGAGAGAGGTGTCCGTCTGGCTCTCCTGAGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 90 bp TCCCCAGTCGAGTCTTGTCCTTGGCACTGCGGCAGCCTTGCAGGCTaGCAAGGATCTGGGCCTGCACACTCTGAACCCACAGCTCCCGCT +
Preference number: 5 (lower is better)
Translates to: SPVESCPWHCGSLAG*QGSGPAHSEPTAPA
Trigger: AGCGGGAGCTGTGGGTTCAGAGTGTGCAGGCCCAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGACTGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CCA 90 bp CCGGCTGGAGGATTAGGGTTTGGATGGGCACTGTGTGTCGCACATTaGGAGTGGAGAGACAGCAGGCCCTGGGGCCTGAGAGCCAGAGGC +
Preference number: 5 (lower is better)
Translates to: PAGGLGFGWALCVAH*EWRDSRPWGLRARG
Trigger: GCCTCTGGCTCTCAGGCCCCAGGGCCTGCTGTCTCTCCACTCCCAATGTGCGACACACAGTGCCCATCCAAACCCTAATCCTCCAGCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CCA 90 bp GGGCGCTCTCGTGACAACCCACACGGGGGTTCACCCACCTTTGTCTaGCCCAAGACTCCTGGAACATCCAGCCAAGCCCGGCTGGAGGAT +
Preference number: 5 (lower is better)
Translates to: GRSRDNPHGGSPTFV*PKTPGTSSQARLED
Trigger: ATCCTCCAGCCGGGCTTGGCTGGATGTTCCAGGAGTCTTGGGCCAGACAAAGGTGGGTGAACCCCCGTGTGGGTTGTCACGAGAGCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CCA 90 bp GCAGGGCACTGGGAGGAGGAGAGGACCAGTCCTGCCAACTGTAGCTaGGCCACACTCAGGAGAGCCAGACGGACACCTCTCTCTAGGCGA +
Preference number: 5 (lower is better)
Translates to: AGHWEEERTSPANCS*ATLRRARRTPLSRR
Trigger: TCGCCTAGAGAGAGGTGTCCGTCTGGCTCTCCTGAGTGTGGCCCAGCTACAGTTGGCAGGACTGGTCCTCTCCTCCTCCCAGTGCCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGGCACCTCGCTGGCGTaGCGGAAGCTGCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQGTSLA*RKLQRR
Trigger: GCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCGGGAGCGCAAAGTCCACAAGTGAGCGGGCAGATGGCCCGTCTGCGGCACAGAATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGT +
Preference number: 5 (lower is better)
Translates to: PGAQSPQVSGQMARLRHRMLERR*DCFRMG
Trigger: ACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACAT...TCTGTGCCGCAGACGGGCCATCTGCCCGCTCACTTGTGGACTTTGCGCTCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CAA 90 bp GTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGAGGTGCGGAAAGGCCTTTTTGTaGATGAAAAGTTGGAAACAG +
Preference number: 5 (lower is better)
Translates to: VPGPGPPPAPHRGHVQRCGKAFL*MKSWKQ
Trigger: CTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCC...GCACCTCTGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCTCCACGGACAGCCCGTaGGCACGGGGGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSSTDSP*ARGLVP
Trigger: GGGCACCAGCCCCCGTGCCAACGGGCTGTCCGTGGA...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCATCCACGGACAGCCCGTaGGCACGGGGGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSSTDSP*ARGLVP
Trigger: GGGCACCAGCCCCCGTGCCAACGGGCTGTCCGTGGA...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGCCCGCTCCTCCGCCGTaGAAGCCTCGAAGTGCCACG +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQPAPPP*KPRSAT
Trigger: CGTGGCACTTCGAGGCTTCAACGGCGGAGGAGCGGG...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS GCA 90 bp TCGCAGTCGATACAAAAGCTGTTGCCGCGGACGGTGCGGACGGCCTaGACAGCCAGAGCTGCGTTCTGGTTCCCCAGTCGAGTCTTGTCC +
Preference number: 5 (lower is better)
Translates to: SQSIQKLLPRTVRTA*TARAAFWFPSRVLS
Trigger: GGACAAGACTCGACTGGGGAACCAGAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGACTGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 90 bp GATTGGGTGCATCGCAGTCGATACAAAAGCTGTTGCCGCGGACGGTaGGGACGGCCTGCACAGCCAGAGCTGCGTTCTGGTTCCCCAGTC +
Preference number: 5 (lower is better)
Translates to: DWVHRSRYKSCCRGR*GRPAQPELRSGSPV
Trigger: GACTGGGGAACCAGAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGACTGCGATGCACCCAATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 90 bp TGGCCCAGTCTGGATTGGGTGCATCGCAGTCGATACAAAAGCTGTTaGCGCGGACGGTGCGGACGGCCTGCACAGCCAGAGCTGCGTTCT +
Preference number: 5 (lower is better)
Translates to: WPSLDWVHRSRYKSC*RGRCGRPAQPELRS
Trigger: AGAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGACTGCGATGCACCCAATCCAGACTGGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 90 bp CCTCACCCTGCGTGCCCACAAGCACCATGGGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCAGGAAGTAGTTGTACACCGTCTGGA +
Preference number: 5 (lower is better)
Translates to: PHPACPQAPWAPRWR*GSCRDAGSSCTPSG
Trigger: TCCAGACGGTGTACAACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCACGCAGGGTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS CCA 90 bp GGAGGATTAGGGTTTGGATGGGCACTGTGTGTCGCACATTGGGAGTaGAGAGACAGCAGGCCCTGGGGCCTGAGAGCCAGAGGCCACCCT +
Preference number: 5 (lower is better)
Translates to: GGLGFGWALCVAHWE*RDSRPWGLRARGHP
Trigger: AGGGTGGCCTCTGGCTCTCAGGCCCCAGGGCCTGCTGTCTCTCCACTCCCAATGTGCGACACACAGTGCCCATCCAAACCCTAATCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS-3UTR CAA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGGGCACCTCGCTGGCGTaGCGGAAGCTGCAGAGACGC +
Preference number: 5 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPGTSLA*RKLQRR
Trigger: GCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCC...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGGCACTGCGGCAGCCTaGCAGGCTGGCAAGGATCTG +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQGTAAA*QAGKDL
Trigger: CAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGCC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGCCCTCCCAGACGCTGTaGGCGAGGGCATTGCCCATG +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQPSQTL*ARALPM
Trigger: CATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGGG...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS GCA 90 bp TGGCATCCTGCGTGCCCACAAGCACCATGGGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCAGGAAGTAGTTGTACACCGTCTGGA +
Preference number: 5 (lower is better)
Translates to: WHPACPQAPWAPRWR*GSCRDAGSSCTPSG
Trigger: TCCAGACGGTGTACAACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCACGCAGGATGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335367.7
ENST00000397238.7
ENST00000463381.5
ENST00000469901.5
ENST00000473312.5
ENST00000476375.5
ENST00000479901.5
ENST00000492234.5
ENST00000622464.4
CDS GCA 90 bp CAGCCAGGAAACCCAAGCTGTCAGGGAGCGCTCACTGCAGGTGAGTaGCAAGCCGGAAGCGGGCTCCTGTTGAAGGCCTATACTCTCCCT +
Preference number: 5 (lower is better)
Translates to: QPGNPSCQGALTAGE*QAGSGLLLKAYTLP
Trigger: AGGGAGAGTATAGGCCTTCAACAGGAGCCCGCTTCCGGCTTGGCACTCACCTGCAGTGAGCGCTCCCTGACAGCTTGGGTTTCCTGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS GCA 90 bp AGACTGGAAGAGAAAACAAGAGGCGTGTTAAAGAGGCCCAGGGTCTaGCGAGAGCTGCCCACCTGGACTTCCCGGCCTCCCTCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: RLEEKTRGVLKRPRV*RELPTWTSRPPSCL
Trigger: GAGGCAGGAGGGAGGCCGGGAAGTCCAGGTGGGCAGCTCTCGGCAGACCCTGGGCCTCTTTAACACGCCTCTTGTTTTCTCTTCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485904.5
CDS CCA 90 bp ACAACGACTGGGACCAGCAGGTCCTGGAAAGATCCCGGGCTCCTTTaGGGCTCCTGGCTAGCTTGGTACAACATCCTGCGCTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: TTTGTSRSWKDPGLL*GSWLAWYNILRSTC
Trigger: GCACGTGGAGCGCAGGATGTTGTACCAAGCTAGCCAGGAGCCCCAAAGGAGCCCGGGATCTTTCCAGGACCTGCTGGTCCCAGTCGTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS CCA 90 bp CCAGGGCATGCTATCGCCACAACTCCACTCACTACCCTGCTCCACTaGCAAGTGTCCTCCCCTAGACCCTTCCCCAGCTGCAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: PGHAIATTPLTTLLH*QVSSPRPFPSCKAT
Trigger: TGTGGCCTTGCAGCTGGGGAAGGGTCTAGGGGAGGACACTTGCCAGTGGAGCAGGGTAGTGAGTGGAGTTGTGGCGATAGCATGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS-3UTR CAA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCAGATCTGTGGAGAGCTaGCGGGCTCTGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTRSVES*RALLSS
Trigger: CGACGACAGCAGAGCCCGCAAGCTCTCCACAGATCT...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGGGCCCGATGGCCAGTaGCTGCTTCTTTCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQGPDGQ*LLLSQG
Trigger: GCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCCC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGCCATTCGTGGCCTGGTaGATGTGCACGGCCGGGATG +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQPFVAW*MCTAGM
Trigger: CATCCCGGCCGTGCACATCAACCAGGCCACGAATGG...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GAGAGCAGTCCCAGGGCCCGGCCCGCCTCCGGCCCCGCACAGGGGGCATGTCCAGTTGGAAAGGCCTTTTaGTTGATGAAAAGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: ESSPRARPASGPAQGACPVGKAF*LMKSWK
Trigger: TTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAAC...TGGACATGCCCCCTGTGCGGGGCCGGAGGCGGGCCGGGCCCTGGGACTGCTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000335367.7
ENST00000467724.5
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCGGATGGCCGCGGAGTaGGAGAGCGCGAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRRMAAE*ESANCW
Trigger: CCAGCAGTTCGCGCTCTCCAACTCCGCGGCCATCCG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CAA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGAGCAGGATCCCCTGCTaGATGGGGATGGCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRSRIPC*MGMARP
Trigger: CGGCCGCGCCATCCCCATCAAGCAGGGGATCCTGCT...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCTCCACGGACAGCCCGTaGGCACGGGGGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPSTDSP*ARGLVP
Trigger: GGGCACCAGCCCCCGTGCCAACGGGCTGTCCGTGGA...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGCGGTGCTTCTTCCGGTaGGAGTGGGGAGATGGGGGA +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQRCFFR*EWGDGG
Trigger: TCCCCCATCTCCCCACTCCAACCGGAAGAAGCACCG...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CAA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCCCCGCTCCTCCGCCGTaGAAGCCTCGAAGTGCCACG +
Preference number: 5 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLPAPPP*KPRSAT
Trigger: CGTGGCACTTCGAGGCTTCAACGGCGGAGGAGCGGG...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGGAGGGGTTGGTGCCATaGGCAGGCTCTCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQEGLVP*AGSLLG
Trigger: CCCCAACAGAGAGCCTGCCAATGGCACCAACCCCTC...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCCCCTTACAAAAGGTGGCACATATCTGGTaGATGTGCACGGCCGGGATG +
Preference number: 5 (lower is better)
Translates to: RHHTEQHRSLSRARPLQKVAHIW*MCTAGM
Trigger: CATCCCGGCCGTGCACATCAACCAGATATGTGCCAC...CTTTTGTAAGGGGCGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479901.5
CDS TCA 90 bp TCTGCATCAGAGATCTTCCAACTTGTGGAACGAGCTGGGTGGTGCTaGCACCCATCGCCGCAGTGCTCCTTGAGGGGCCCCTCCTGGCTT +
Preference number: 5 (lower is better)
Translates to: SASEIFQLVERAGWC*HPSPQCSLRGPSWL
Trigger: AAGCCAGGAGGGGCCCCTCAAGGAGCACTGCGGCGATGGGTGTCAGCACCACCCAGCTCGTTCCACAAGTTGGAAGATCTCTGATGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478320.1
CDS TCA 90 bp GACTCAGCCAGGAAACCCAAGCTGTCAGGGAGCGCTCACTGCAGGTaGGTGCCAAGCCGGAAGCGGGCTCCTGTTGAAGGCCTATACTCT +
Preference number: 5 (lower is better)
Translates to: DSARKPKLSGSAHCR*VPSRKRAPVEGLYS
Trigger: AGAGTATAGGCCTTCAACAGGAGCCCGCTTCCGGCTTGGCACTCACCTGCAGTGAGCGCTCCCTGACAGCTTGGGTTTCCTGGCTGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS GCA 90 bp TGTCAGGGACAGGAACGGGACAGGACAGCGTCTTCTCGTTTCCCTTaGTCTAGGGAAACAGCCCAGCTGTCCTCTGGCTCCCTGCTGTGC +
Preference number: 5 (lower is better)
Translates to: CQGQERDRTASSRFP*SRETAQLSSGSLLC
Trigger: GCACAGCAGGGAGCCAGAGGACAGCTGGGCTGTTTCCCTAGAGCAAGGGAAACGAGAAGACGCTGTCCTGTCCCGTTCCTGTCCCTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467250.1
CDS GCA 90 bp CTTTGGGGCTCCTGGCTAGCTTGGTACAACATCCTGCGCTCCACGTaGCCAGTGTCCCCATTTGGACTGAGGCCCTCGTTCTCCTGCATC +
Preference number: 5 (lower is better)
Translates to: LWGSWLAWYNILRST*PVSPFGLRPSFSCI
Trigger: GATGCAGGAGAACGAGGGCCTCAGTCCAAATGGGGACACTGGGCACGTGGAGCGCAGGATGTTGTACCAAGCTAGCCAGGAGCCCCAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS CCA 90 bp TCCTGGAACATCCAGCCAAGCCCGGCTGGAGGATTAGGGTTTGGATaGGCACTGTGTGTCGCACATTGGGAGTGGAGAGACAGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SWNIQPSPAGGLGFG*ALCVAHWEWRDSRP
Trigger: GGGCCTGCTGTCTCTCCACTCCCAATGTGCGACACACAGTGCCCATCCAAACCCTAATCCTCCAGCCGGGCTTGGCTGGATGTTCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CCA 90 bp CAACCCACACGGGGGTTCACCCACCTTTGTCTGGCCCAAGACTCCTaGAACATCCAGCCAAGCCCGGCTGGAGGATTAGGGTTTGGATGG +
Preference number: 5 (lower is better)
Translates to: QPTRGFTHLCLAQDS*NIQPSPAGGLGFGW
Trigger: CCATCCAAACCCTAATCCTCCAGCCGGGCTTGGCTGGATGTTCCAGGAGTCTTGGGCCAGACAAAGGTGGGTGAACCCCCGTGTGGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS-3UTR CAA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAAGCAGGATCCCCTGCTaGATGGGGATGGCGCGGCCG +
Preference number: 5 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQSRIPC*MGMARP
Trigger: CGGCCGCGCCATCCCCATCAAGCAGGGGATCCTGCT...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAGGCACTGCGGCAGCCTaGCAGGCTGGCAAGGATCTG +
Preference number: 5 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSGTAAA*QAGKDL
Trigger: CAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGCC...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCACCCTCCCAGACGCTGTaGGCGAGGGCATTGCCCATG +
Preference number: 5 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSPSQTL*ARALPM
Trigger: CATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGGG...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGTCCAGCACCCCCAACTaGGTGCCGTCCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQSSTPN*VPSSSC
Trigger: ACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGA...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS TCA 90 bp GGTACAACATCCTGCGCTCCACGTGCCCAGTGTCCCCATTTGGACTaGGGCCCTCGTTCTCCTGCATCCCTCTTTCTAGGACTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GTTSCAPRAQCPHLD*GPRSPASLFLGLSQ
Trigger: CTGGCTGAGTCCTAGAAAGAGGGATGCAGGAGAACGAGGGCCTCAGTCCAAATGGGGACACTGGGCACGTGGAGCGCAGGATGTTGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS GCA 90 bp TGTTTATGCCATCAGGGCTCCTGGCCTGCGTGCACACCCAGGGCATaGTATCGCCACAACTCCACTCACTACCCTGCTCCACTGGCAAGT +
Preference number: 5 (lower is better)
Translates to: CLCHQGSWPACTPRA*YRHNSTHYPAPLAS
Trigger: ACTTGCCAGTGGAGCAGGGTAGTGAGTGGAGTTGTGGCGATAGCATGCCCTGGGTGTGCACGCAGGCCAGGAGCCCTGATGGCATAAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 90 bp GGCCCGATGGCCAGTTGCTGCTTCTTTCGCAAGGCCACTACCTTCTaGGCCACTGCAGGGGACAGCAGAGTCAATTATACCCACGTCCTG +
Preference number: 5 (lower is better)
Translates to: GPMASCCFFRKATTF*ATAGDSRVNYTHVL
Trigger: CAGGACGTGGGTATAATTGACTCTGCTGTCCCCTGCAGTGGCCCAGAAGGTAGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480106.1
CDS-3UTR CAA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCCATTCGTGGCCTGGTaGATGTGCACGGCCGGGATG +
Preference number: 5 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRPFVAW*MCTAGM
Trigger: CATCCCGGCCGTGCACATCAACCAGGCCACGAATGG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGT +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQMLERR*DCFRMG
Trigger: ACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACAT...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TGGCCCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTTTGTTGATGAAAAGTaGGAAACAGTGGCACATATC +
Preference number: 5 (lower is better)
Translates to: WPVCGTDTTRHVAPSASAFVDEK*ETVAHI
Trigger: GATATGTGCCACTGTTTCCAACTTTTCATCAACAAA...CGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCCTTTGTTGATGAAAAGTaGGAAACAGTGGCACATATC +
Preference number: 5 (lower is better)
Translates to: RLRHRHHTARGTERVGVAFVDEK*ETVAHI
Trigger: GATATGTGCCACTGTTTCCAACTTTTCATCAACAAA...GGCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CCGTCTGCGGCACAGACACCACACGGCACGTGGCACCGAGCGCGTCGGCGTGGCTTTGTTGATGAAAAGTaGGAAACAGTGGCACATATC +
Preference number: 5 (lower is better)
Translates to: PSAAQTPHGTWHRARRRGFVDEK*ETVAHI
Trigger: GATATGTGCCACTGTTTCCAACTTTTCATCAACAAA...GCCACGCCGACGCGCTCGGTGCCACGTGCCGTGTGGTGTCTGTGCCGCAGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCCGGATGGCCGCGGAGTaGGAGAGCGCGAACTGCTGG +
Preference number: 5 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFRMAAE*ESANCW
Trigger: CCAGCAGTTCGCGCTCTCCAACTCCGCGGCCATCCG...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGGGGAGGATCCAGCTaGGGGCTGGAACTGAGTACC +
Preference number: 5 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSGGGSS*GLELST
Trigger: GGTACTCAGTTCCAGCCCCAAGCTGGATCCTCCCCC...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCGGTGCTTCTTCCGGTaGGAGTGGGGAGATGGGGGA +
Preference number: 5 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNRCFFR*EWGDGG
Trigger: TCCCCCATCTCCCCACTCCAACCGGAAGAAGCACCG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGGCACTGCGGCAGCCTaGCAGGCTGGCAAGGATCTG +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIGTAAA*QAGKDL
Trigger: CAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGCC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACCCTCCCAGACGCTGTaGGCGAGGGCATTGCCCATG +
Preference number: 5 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQPSQTL*ARALPM
Trigger: CATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGGG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATGAGGGGTTGGTGCCATaGGCAGGCTCTCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNEGLVP*AGSLLG
Trigger: CCCCAACAGAGAGCCTGCCAATGGCACCAACCCCTC...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAGAGGGGTTGGTGCCATaGGCAGGCTCTCTGTTGGGG +
Preference number: 5 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSEGLVP*AGSLLG
Trigger: CCCCAACAGAGAGCCTGCCAATGGCACCAACCCCTC...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS TCA 90 bp CACTCCTTGTTCAGGGACTTGCCGCTCCGCTTTAGCAGGATCCCCTaGGAACAGAGGTCTGATCAGAAACCAGGAGCCAGCCCCCTAGGT +
Preference number: 5 (lower is better)
Translates to: HSLFRDLPLRFSRIP*EQRSDQKPGASPLG
Trigger: ACCTAGGGGGCTGGCTCCTGGTTTCTGATCAGACCTCTGTTCTCAGGGGATCCTGCTAAAGCGGAGCGGCAAGTCCCTGAACAAGGAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494808.1
CDS GCA 90 bp TCCCACAGAAATAGAACCGGCGCCTCCTTCCCCAGGCACCACCACTaGGCCTCACCTTGCTTTCAACCACAGCCTTCGAACTACGTGATC +
Preference number: 5 (lower is better)
Translates to: SHRNRTGASFPRHHH*ASPCFQPQPSNYVI
Trigger: GATCACGTAGTTCGAAGGCTGTGGTTGAAAGCAAGGTGAGGCGCAGTGGTGGTGCCTGGGGAAGGAGGCGCCGGTTCTATTTCTGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS GCA 90 bp GGGTGTGGGCACCATCCGTACATGTCAGCTGCAGCCGCCTCATTTTaGAGCTCATTAAACCCAATATTCCTGACGGCGTCAGCGTGGGGC +
Preference number: 5 (lower is better)
Translates to: GCGHHPYMSAAAASF*SSLNPIFLTASAWG
Trigger: GCCCCACGCTGACGCCGTCAGGAATATTGGGTTTAATGAGCTGCAAAATGAGGCGGCTGCAGCTGACATGTACGGATGGTGCCCACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 90 bp AGACTCCTGGAACATCCAGCCAAGCCCGGCTGGAGGATTAGGGTTTaGATGGGCACTGTGTGTCGCACATTGGGAGTGGAGAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: RLLEHPAKPGWRIRV*MGTVCRTLGVERQQ
Trigger: CTGCTGTCTCTCCACTCCCAATGTGCGACACACAGTGCCCATCCAAACCCTAATCCTCCAGCCGGGCTTGGCTGGATGTTCCAGGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CCA 90 bp GGCCCGATGGCCAGTTGCTGCTTCTTTCGCAAGGCCACTACCTTCTaGGCCACTGCAGGGGACAGCAGAGTCAATTATACCCACTGGAGA +
Preference number: 5 (lower is better)
Translates to: GPMASCCFFRKATTF*ATAGDSRVNYTHWR
Trigger: TCTCCAGTGGGTATAATTGACTCTGCTGTCCCCTGCAGTGGCCCAGAAGGTAGTGGCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498559.5
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGGGCCCGATGGCCAGTaGCTGCTTCTTTCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIGPDGQ*LLLSQG
Trigger: GCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCCC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGAGTTGGGCAGTGACTaGCAGGGCCCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIELGSD*QGPMAS
Trigger: ACTGGCCATCGGGCCCTGCAAGTCACTGCCCAACTC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAGAGTTGGGCAGTGACTaGCAGGGCCCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQELGSD*QGPMAS
Trigger: ACTGGCCATCGGGCCCTGCAAGTCACTGCCCAACTC...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCCGAGACGTGAAGATGTaGGAGCGCCGCTTGGACTGC +
Preference number: 5 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSRDVKM*ERRLDC
Trigger: GCAGTCCAAGCGGCGCTCCAACATCTTCACGTCTCG...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCCCGATGCTGTCCACCTaGCACTCGGCAGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLPMLST*HSAAFF
Trigger: GAAGAAGGCTGCCGAGTGCAAGGTGGACAGCATCGG...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCACCGATGCTGTCCACCTaGCACTCGGCAGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSPMLST*HSAAFF
Trigger: GAAGAAGGCTGCCGAGTGCAAGGTGGACAGCATCGG...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCAGCAGGTCAATCTCCTaGCCGTGGATGTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTSRSIS*PWMFCM
Trigger: CATGCAGAACATCCACGGCAAGGAGATTGACCTGCT...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCGGGGGAGGATCCAGCTaGGGGCTGGAACTGAGTACC +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIGGGSS*GLELST
Trigger: GGTACTCAGTTCCAGCCCCAAGCTGGATCCTCCCCC...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCGGTGCTTCTTCCGGTaGGAGTGGGGAGATGGGGGA +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIRCFFR*EWGDGG
Trigger: TCCCCCATCTCCCCACTCCAACCGGAAGAAGCACCG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CAA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGTTCCCCAGTCGAGTCTaGTCCTTGGCACTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRFPSRV*SLALRQ
Trigger: CTGCCGCAGTGCCAAGGACAAGACTCGACTGGGGAA...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTCGATACAAAAGCTGTaGCCGCGGACGGTGCGGACG +
Preference number: 5 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLSIQKL*PRTVRT
Trigger: CGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCTCGATACAAAAGCTGTaGCCGCGGACGGTGCGGACG +
Preference number: 5 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSSIQKL*PRTVRT
Trigger: CGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGA...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCCCTCCCAGACGCTGTaGGCGAGGGCATTGCCCATG +
Preference number: 5 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPPSQTL*ARALPM
Trigger: CATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGGG...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATTTGGCAGGCTCTCTGTaGGGGGTAGGCGCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNLAGSL*GVGAKP
Trigger: TGGCTTAGCGCCTACCCCCAACAGAGAGCCTGCCAA...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTTGGCAGGCTCTCTGTaGGGGGTAGGCGCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLLAGSL*GVGAKP
Trigger: TGGCTTAGCGCCTACCCCCAACAGAGAGCCTGCCAA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATAGCTCAGCAGAGGGGTaGGTGCCATTGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNSSAEG*VPLAGS
Trigger: AGAGCCTGCCAATGGCACCAACCCCTCTGCTGAGCT...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCAGCTCAGCAGAGGGGTaGGTGCCATTGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSSSAEG*VPLAGS
Trigger: AGAGCCTGCCAATGGCACCAACCCCTCTGCTGAGCT...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTCCAGCACCCCCAACTaGGTGCCGTCCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLSSTPN*VPSSSC
Trigger: ACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATTCCAGCACCCCCAACTaGGTGCCGTCCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNSSTPN*VPSSSC
Trigger: ACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGA...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS TCA 90 bp TCAGAGGCTCTGCACATAGTGAGCCCTCCAGCTCTCCCTCCCAGCTaGAGGCTGTACTTCTTCCACTCCCTAAGGCCAAGTAATGGGCAG +
Preference number: 5 (lower is better)
Translates to: SEALHIVSPPALPPS*RLYFFHSLRPSNGQ
Trigger: CTGCCCATTACTTGGCCTTAGGGAGTGGAAGAAGTACAGCCTTCAGCTGGGAGGGAGAGCTGGAGGGCTCACTATGTGCAGAGCCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS GCA 90 bp GAGGGTGGGGGAAGGCGGGTGTGGGCACCATCCGTACATGTCAGCTaGAGCCGCCTCATTTTGCAGCTCATTAAACCCAATATTCCTGAC +
Preference number: 5 (lower is better)
Translates to: EGGGRRVWAPSVHVS*SRLILQLIKPNIPD
Trigger: GTCAGGAATATTGGGTTTAATGAGCTGCAAAATGAGGCGGCTGCAGCTGACATGTACGGATGGTGCCCACACCCGCCTTCCCCCACCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCGGGCCCGATGGCCAGTaGCTGCTTCTTTCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPGPDGQ*LLLSQG
Trigger: GCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCCC...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GTTAAACCAATCACAGCGGTGGGTGGAAAGCATGAATTTTCCCCTCGGCAGTGGGAGTTGGGCAGTGACTaGCAGGGCCCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: VKPITAVGGKHEFSPRQWELGSD*QGPMAS
Trigger: ACTGGCCATCGGGCCCTGCAAGTCACTGCCCAACTC...CCACTGCCGAGGGGAAAATTCATGCTTTCCACCCACCGCTGTGATTGGTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGT +
Preference number: 5 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNMLERR*DCFRMG
Trigger: ACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACAT...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGCATATCGTGAAGATGTaGGAGCGCCGCTTGGACTGC +
Preference number: 5 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPHIVKM*ERRLDC
Trigger: GCAGTCCAAGCGGCGCTCCAACATCTTCACGATATG...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS-3UTR CAA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAACGAGACGTGAAGATGTaGGAGCGCCGCTTGGACTGC +
Preference number: 5 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQRDVKM*ERRLDC
Trigger: GCAGTCCAAGCGGCGCTCCAACATCTTCACGTCTCG...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCGATGCTGTCCACCTaGCACTCGGCAGCCTTCTTC +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIPMLST*HSAAFF
Trigger: GAAGAAGGCTGCCGAGTGCAAGGTGGACAGCATCGG...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCGGGGGAGGATCCAGCTaGGGGCTGGAACTGAGTACC +
Preference number: 5 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPGGGSS*GLELST
Trigger: GGTACTCAGTTCCAGCCCCAAGCTGGATCCTCCCCC...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCAGTCGAGTCTTGTCCTaGGCACTGCGGCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLISRVLS*ALRQPC
Trigger: GCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGACT...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCTTCCCCAGTCGAGTCTaGTCCTTGGCACTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLIFPSRV*SLALRQ
Trigger: CTGCCGCAGTGCCAAGGACAAGACTCGACTGGGGAA...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAATCGATACAAAAGCTGTaGCCGCGGACGGTGCGGACG +
Preference number: 5 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQSIQKL*PRTVRT
Trigger: CGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGA...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCTGGCCCAGTCTGGATaGGGTGCATCGCAGTCGATA +
Preference number: 5 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNLAQSG*GASQSI
Trigger: TATCGACTGCGATGCACCCAATCCAGACTGGGCCAG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCACTGTTGGCGAGGGCATaGCCCATGGCAGTCATGACA +
Preference number: 5 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSLLARA*PMAVMT
Trigger: TGTCATGACTGCCATGGGCAATGCCCTCGCCAACAG...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCTGTTGGCGAGGGCATaGCCCATGGCAGTCATGACA +
Preference number: 5 (lower is better)
Translates to: GTLGQRAKSLIPLCCSSNLLARA*PMAVMT
Trigger: TGTCATGACTGCCATGGGCAATGCCCTCGCCAACAG...ATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAGGCTGTTGGCGAGGGCATaGCCCATGGCAGTCATGACA +
Preference number: 5 (lower is better)
Translates to: SSLSSSTPNLVPSSSCFRLLARA*PMAVMT
Trigger: TGTCATGACTGCCATGGGCAATGCCCTCGCCAACAG...CCTGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGCTTCTGTTCATACTaGGCCCGTATCCAGCGTTCC +
Preference number: 5 (lower is better)
Translates to: PHRHLRRVLSLFNGTLGQSFCSY*ARIQRS
Trigger: GGAACGCTGGATACGGGCCAAGTATGAACAGAAGCT...CTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCTTGGCAGGCTCTCTGTaGGGGGTAGGCGCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLILAGSL*GVGAKP
Trigger: TGGCTTAGCGCCTACCCCCAACAGAGAGCCTGCCAA...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CTCCCCTCTCCTCACAGGCACCTCCGAAGGGTCCTGTCCCTTTTCAATGGCACCAATCCCCAACTCTCCTaGATCCCTTTGACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LPSPHRHLRRVLSLFNGTNPQLS*IPLTLL
Trigger: GAGGAGAGTCAAAGGGATCAAGGAGAGTTGGGGATT...GGTGCCATTGAAAAGGGACAGGACCCTTCGGAGGTGCCTGTGAGGAGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS CCA 90 bp GGGAGACCCCACGCTGTAAGTACTAAGCATCACTGTGTCACAGGTTaGCTAGGTGTCTCTGCTCCCCTGACCCATACGTCTACCCTGATG +
Preference number: 5 (lower is better)
Translates to: GRPHAVSTKHHCVTG*LGVSAPLTHTSTLM
Trigger: CATCAGGGTAGACGTATGGGTCAGGGGAGCAGAGACACCTAGCCAACCTGTGACACAGTGATGCTTAGTACTTACAGCGTGGGGTCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS-3UTR CAA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCAGTCGAGTCTTGTCCTaGGCACTGCGGCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFSRVLS*ALRQPC
Trigger: GCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGACT...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCAGTCGAGTCTTGTCCTaGGCACTGCGGCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPSRVLS*ALRQPC
Trigger: GCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGACT...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTTCCCCAGTCGAGTCTaGTCCTTGGCACTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFFPSRV*SLALRQ
Trigger: CTGCCGCAGTGCCAAGGACAAGACTCGACTGGGGAA...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCTGCGTGAAGACAACGTaGGCCATGGCACTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLCVKTT*AMALER
Trigger: TCTCTCCAGTGCCATGGCCAACGTTGTCTTCACGCA...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCATGCGTGAAGACAACGTaGGCCATGGCACTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: NGTLGQRAKSLIPLCCSSCVKTT*AMALER
Trigger: TCTCTCCAGTGCCATGGCCAACGTTGTCTTCACGCA...TGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS CCA 90 bp GCAAATAGGGGCCTGAGGGCATCTGTACTGACAAGCACTGAGGGCTaGACTGTGAACCCAAGCAATGTGGTGAAGCTCTTCCAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: ANRGLRASVLTSTEG*TVNPSNVVKLFQAL
Trigger: CAGAGCTTGGAAGAGCTTCACCACATTGCTTGGGTTCACAGTCCAGCCCTCAGTGCTTGTCAGTACAGATGCCCTCAGGCCCCTATTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS-3UTR CAA 90 bp GAGGCCAGAAGAGGCCCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAGTTGGAAAGGCCTTTTaGTTGATGAAAAGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: EARRGPAPCQAPGAESTRVGKAF*LMKSWK
Trigger: TTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAAC...TCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGGGCCTCTTCTGGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CCTTCCCTGGGGGTGGGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGAACTGGTCTTCTAATTaGGAAGGAGTTGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: PSLGVGLVTKVPVGLWSGNWSSN*EGVGKA
Trigger: GGCCTTTCCAACTCCTTCCAAATTAGAAGACCAGTT...CCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCCCACCCCCAGGGAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTTCCACGGACAGCCCGTaGGCACGGGGGCTGGTGCCC +
Preference number: 5 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFSTDSP*ARGLVP
Trigger: GGGCACCAGCCCCCGTGCCAACGGGCTGTCCGTGGA...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAGGCACTGCGGCAGCCTaGCAGGCTGGCAAGGATCTG +
Preference number: 5 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAGTAAA*QAGKDL
Trigger: CAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGCC...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCTGGCCCAGTCTGGATaGGGTGCATCGCAGTCGATA +
Preference number: 5 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPLAQSG*GASQSI
Trigger: TATCGACTGCGATGCACCCAATCCAGACTGGGCCAG...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCCTGTTGGCGAGGGCATaGCCCATGGCAGTCATGACA +
Preference number: 5 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPLLARA*PMAVMT
Trigger: TGTCATGACTGCCATGGGCAATGCCCTCGCCAACAG...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCAGCTTCTGTTCATACTaGGCCCGTATCCAGCGTTCC +
Preference number: 5 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSSFCSY*ARIQRS
Trigger: GGAACGCTGGATACGGGCCAAGTATGAACAGAAGCT...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAATGCGTGAAGACAACGTaGGCCATGGCACTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQCVKTT*AMALER
Trigger: TCTCTCCAGTGCCATGGCCAACGTTGTCTTCACGCA...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS TCA 90 bp AGACAGCCGCATGAATCTCATTCCCAATGGTCACTGCCCCATGGGTaGACAATTCCTAACAAGCAGTGTGACTGTGTCCTGGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RQPHESHSQWSLPHG*TIPNKQCDCVLGAG
Trigger: TCCAGCCCCCAGGACACAGTCACACTGCTTGTTAGGAATTGTTCACCCATGGGGCAGTGACCATTGGGAATGAGATTCATGCGGCTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS GCA 90 bp CAGGCCCCAGAAGACAGCCGCATGAATCTCATTCCCAATGGTCACTaGCCCATGGGTGAACAATTCCTAACAAGCAGTGTGACTGTGTCC +
Preference number: 5 (lower is better)
Translates to: QAPEDSRMNLIPNGH*PMGEQFLTSSVTVS
Trigger: GGACACAGTCACACTGCTTGTTAGGAATTGTTCACCCATGGGGCAGTGACCATTGGGAATGAGATTCATGCGGCTGTCTTCTGGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 90 bp CTTTCAACCACAGCCTTCGAACTACGTGATCTCCATGATCATTTGTaGGGCTTAGTCTGCCGGACCAGAAGGGAGACCCCACGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: LSTTAFELRDLHDHL*GLVCRTRRETPRCK
Trigger: CTTACAGCGTGGGGTCTCCCTTCTGGTCCGGCAGACTAAGCCCCACAAATGATCATGGAGATCACGTAGTTCGAAGGCTGTGGTTGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS-3UTR CAA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCAGAGTTGGGCAGTGACTaGCAGGGCCCGATGGCCAGT +
Preference number: 5 (lower is better)
Translates to: CTKFTWDSQITPRLFHPAELGSD*QGPMAS
Trigger: ACTGGCCATCGGGCCCTGCAAGTCACTGCCCAACTC...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTGCACCCTGTCAAGCTCCTGGGGCAGAGTCCACCCGAATGCGGATCCTAGGAGGAAAGGCCTTTTTGTaGATGAAAAGTTGGAAACAG +
Preference number: 5 (lower is better)
Translates to: PAPCQAPGAESTRMRILGGKAFL*MKSWKQ
Trigger: CTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCC...TCCTAGGATCCGCATTCGGGTGGACTCTGCCCCAGGAGCTTGACAGGGTGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp GGGTTAGTTACAAAGGTTCCCGTGGGTCTCTGGAGTGGGGAGCTCGGCGGCCGCGTTGGAAAGGCCTTTTaGTTGATGAAAAGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: GLVTKVPVGLWSGELGGRVGKAF*LMKSWK
Trigger: TTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAAC...GCGGCCGCCGAGCTCCCCACTCCAGAGACCCACGGGAACCTTTGTAACTAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAAGCAGGTCAATCTCCTaGCCGTGGATGTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQSRSIS*PWMFCM
Trigger: CATGCAGAACATCCACGGCAAGGAGATTGACCTGCT...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTGACTCTCCTCCCTAATTTCCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTGCGTGAAGACAACGTaGGCCATGGCACTGGAGAGA +
Preference number: 5 (lower is better)
Translates to: LTLLPNFLGFVLSACPCFCVKTT*AMALER
Trigger: TCTCTCCAGTGCCATGGCCAACGTTGTCTTCACGCA...GAAGCAGGGACATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGAGAGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTTGGCTTCGTCCTCTCAGCATGTCCCTGCTTCTCCATCTCTGTGTCTGTTCCTCCTCCCTAATTTCCTaGGCTTCGTCCTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: PWLRPLSMSLLLHLCVCSSSLIS*ASSSQH
Trigger: ATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGA...GGAACAGACACAGAGATGGAGAAGCAGGGACATGCTGAGAGGACGAAGCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CGAAGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCAATCCCCAACTCTCCTaGATCCCTTTGACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: RRVLSLFNGTLGQRAKSLNPQLS*IPLTLL
Trigger: GAGGAGAGTCAAAGGGATCAAGGAGAGTTGGGGATT...GAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS TCA 90 bp GAACGCGGGTGCCTGGGTCTCATTTCAACCCTTCCATGGCCTCACTaGGTGCAAACCAGCAAGCACTTAAGCTCTGAGCACGTTTATTCA +
Preference number: 5 (lower is better)
Translates to: ERGCLGLISTLPWPH*VQTSKHLSSEHVYS
Trigger: TGAATAAACGTGCTCAGAGCTTAAGTGCTTGCTGGTTTGCACTCAGTGAGGCCATGGAAGGGTTGAAATGAGACCCAGGCACCCGCGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS-3UTR CAA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACCATTCGTGGCCTGGTaGATGTGCACGGCCGGGATG +
Preference number: 5 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPPFVAW*MCTAGM
Trigger: CATCCCGGCCGTGCACATCAACCAGGCCACGAATGG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGTTAAACCAATCACAGATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGT +
Preference number: 5 (lower is better)
Translates to: QRGEAQEKMAKPLLNQSQMLERR*DCFRMG
Trigger: ACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACAT...CTGTGATTGGTTTAACAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CAA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGAACTGGTCTTCTAATTaGGAAGGAGTTGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPNWSSN*EGVGKA
Trigger: GGCCTTTCCAACTCCTTCCAAATTAGAAGACCAGTT...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACCCCAGCAGGTCAATCTCCTaGCCGTGGATGTTCTGCATG +
Preference number: 5 (lower is better)
Translates to: QSLHGTHRSPLVSFIQHPSRSIS*PWMFCM
Trigger: CATGCAGAACATCCACGGCAAGGAGATTGACCTGCT...GGGGTGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCCCGCTCCTCCGCCGTaGAAGCCTCGAAGTGCCACG +
Preference number: 5 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFPAPPP*KPRSAT
Trigger: CGTGGCACTTCGAGGCTTCAACGGCGGAGGAGCGGG...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AGGGTCCTGTCCCTTTTCAATGGCACCTTAGGGCAGAGGGCTAAATCCCTCATCTCCTCCCTAATTTCCTaGGCTTCGTCCTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: RVLSLFNGTLGQRAKSLISSLIS*ASSSQH
Trigger: ATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGA...GATGAGGGATTTAGCCCTCTGCCCTAAGGTGCCATTGAAAAGGGACAGGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCATCCAGCACCCCCAACTaGGTGCCGTCCTCTTCCTGT +
Preference number: 5 (lower is better)
Translates to: CTKFTWDSQITPRLFHPASSTPN*VPSSSC
Trigger: ACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGA...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp AAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTGGCACATATCTGAGAGGGAGCCATTCGTGGCCTGGTaGATGTGCACGGCCGGGATG +
Preference number: 5 (lower is better)
Translates to: KAFLLMKSWKQWHISEREPFVAW*MCTAGM
Trigger: CATCCCGGCCGTGCACATCAACCAGGCCACGAATGG...CTCCCTCTCAGATATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CAA 90 bp TGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAGCACTGGCCCAGTCTGGATaGGGTGCATCGCAGTCGATA +
Preference number: 5 (lower is better)
Translates to: CTKFTWDSQITPRLFHPALAQSG*GASQSI
Trigger: TATCGACTGCGATGCACCCAATCCAGACTGGGCCAG...TGCTGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCATTGGCAGGCTCTCTGTaGGGGGTAGGCGCTAAGCCA +
Preference number: 5 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPLAGSL*GVGAKP
Trigger: TGGCTTAGCGCCTACCCCCAACAGAGAGCCTGCCAA...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS CCA 90 bp GAAGGAGTTGGAAAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTaGCACATATCCTCTGTGTCGCCTTGGGCAAACAGCCTTCCGGCC +
Preference number: 5 (lower is better)
Translates to: EGVGKAFLLMKSWKQ*HISSVSPWANSLPA
Trigger: GGCCGGAAGGCTGTTTGCCCAAGGCGACACAGAGGATATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468796.1
CDS-3UTR CAA 90 bp GGAAGGAGTTGGAAAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTGGCACATAGATCTGTGGAGAGCTaGCGGGCTCTGCTGTCGTCG +
Preference number: 5 (lower is better)
Translates to: GRSWKGLFVDEKLETVAHRSVES*RALLSS
Trigger: CGACGACAGCAGAGCCCGCAAGCTCTCCACAGATCT...ATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CAA 90 bp GAAGGAGTTGGAAAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTGGCACATAGGGCCCGATGGCCAGTaGCTGCTTCTTTCGCAAGGC +
Preference number: 5 (lower is better)
Translates to: EGVGKAFLLMKSWKQWHIGPDGQ*LLLSQG
Trigger: GCCTTGCGAAAGAAGCAGCAACTGGCCATCGGGCCC...TATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CAA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGT +
Preference number: 5 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPMLERR*DCFRMG
Trigger: ACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACAT...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTATTCTTACACACGGCACCATACAGAGCAGCACAGGTCACTGAGCCGGGCCCGGGAAAGGCCTTTTTGTaGATGAAAAGTTGGAAACAG +
Preference number: 5 (lower is better)
Translates to: LFLHTAPYRAAQVTEPGPGKAFL*MKSWKQ
Trigger: CTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCC...CGGGCCCGGCTCAGTGACCTGTGCTGCTCTGTATGGTGCCGTGTGTAAGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000335367.7
ENST00000473312.5
ENST00000479901.5
CDS-3UTR CAA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCACTGGCCCAGTCTGGATaGGGTGCATCGCAGTCGATA +
Preference number: 5 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPLAQSG*GASQSI
Trigger: TATCGACTGCGATGCACCCAATCCAGACTGGGCCAG...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CCTCGTCTCTTTCATCCAGCACCCCCAACTTGGTGCCGTCCTCTTCCTGTTTCAACACAGTCTGGTTTATaGGCTCATCATACACACACA +
Preference number: 5 (lower is better)
Translates to: PRLFHPAPPTWCRPLPVSTQSGL*AHHTHT
Trigger: TGTGTGTGTATGATGAGCCAATAAACCAGACTGTGT...TGAAACAGGAAGAGGACGGCACCAAGTTGGGGGTGCTGGATGAAAGAGACGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTAGTCGAGTCTTGTCCTaGGCACTGCGGCAGCCTTGC +
Preference number: 5 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFSRVLS*ALRQPC
Trigger: GCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGACT...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTTTCCCCAGTCGAGTCTaGTCCTTGGCACTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFFPSRV*SLALRQ
Trigger: CTGCCGCAGTGCCAAGGACAAGACTCGACTGGGGAA...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTAGCTCAGCAGAGGGGTaGGTGCCATTGGCAGGCTCT +
Preference number: 5 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFSSAEG*VPLAGS
Trigger: AGAGCCTGCCAATGGCACCAACCCCTCTGCTGAGCT...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp TTAGGGCAGAGGGCTAAATCCCTCATCCCTCTCTGCTGCAGCTCAAATCCCCAAACACAGTCTGGTTTATaGGCTCATCATACACACACA +
Preference number: 5 (lower is better)
Translates to: LGQRAKSLIPLCCSSNPQTQSGL*AHHTHT
Trigger: TGTGTGTGTATGATGAGCCAATAAACCAGACTGTGT...TTGGGGATTTGAGCTGCAGCAGAGAGGGATGAGGGATTTAGCCCTCTGCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAAGCTTCTGTTCATACTaGGCCCGTATCCAGCGTTCC +
Preference number: 5 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPSFCSY*ARIQRS
Trigger: GGAACGCTGGATACGGGCCAAGTATGAACAGAAGCT...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp GGAAGGAGTTGGAAAGGCCTTTTTGTTGATGAAAAGTTGGAAACAGTGGCACATATTAGCGTGAAGATGTaGGAGCGCCGCTTGGACTGC +
Preference number: 5 (lower is better)
Translates to: GRSWKGLFVDEKLETVAHISVKM*ERRLDC
Trigger: GCAGTCCAAGCGGCGCTCCAACATCTTCACGCTAAT...ATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CAA 90 bp GGAGGAACGAGGCAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGTTATTTGTTGATGAAAAGTaGGAAACAGTGGCACATATC +
Preference number: 5 (lower is better)
Translates to: GGTRQRGEAQEKMAKPLLFVDEK*ETVAHI
Trigger: GATATGTGCCACTGTTTCCAACTTTTCATCAACAAA...TAACAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CAA 90 bp GGAGGAACGAGGCAGCGTGGTGAAGCCCAGGAAAAGATGGCTAAGCCTTTGTTAGTTGGAAAGGCCTTTTaGTTGATGAAAAGTTGGAAA +
Preference number: 5 (lower is better)
Translates to: GGTRQRGEAQEKMAKPLLVGKAF*LMKSWK
Trigger: TTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAAC...TAACAAAGGCTTAGCCATCTTTTCCTGGGCTTCACCACGCTGCCTCGTTCCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000467724.5
CDS-3UTR CAA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCATCCTCCCTAATTTCCTaGGCTTCGTCCTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPSSLIS*ASSSQH
Trigger: ATGCTGAGAGGACGAAGCCAAGGAAATTAGGGAGGA...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTAGCTTCTGTTCATACTaGGCCCGTATCCAGCGTTCC +
Preference number: 5 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFSFCSY*ARIQRS
Trigger: GGAACGCTGGATACGGGCCAAGTATGAACAGAAGCT...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS CCA 90 bp TCTAATTTGGAAGGAGTTGGAAAGGCCTTTTTGTTGATGAAAAGTTaGAAACAGTGGCACATATCCTCTGTGTCGCCTTGGGCAAACAGC +
Preference number: 5 (lower is better)
Translates to: SNLEGVGKAFLLMKS*KQWHISSVSPWANS
Trigger: GCTGTTTGCCCAAGGCGACACAGAGGATATGTGCCACTGTTTCCAACTTTTCATCAACAAAAAGGCCTTTCCAACTCCTTCCAAATTAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468796.1
CDS-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTAATCCCCAACTCTCCTaGATCCCTTTGACTCTCCTC +
Preference number: 5 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFNPQLS*IPLTLL
Trigger: GAGGAGAGTCAAAGGGATCAAGGAGAGTTGGGGATT...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp CAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTCATCCAACACAGTCTGGTTTATaGGCTCATCATACACACACA +
Preference number: 5 (lower is better)
Translates to: QCTKFTWDSQITPRLFHPTQSGL*AHHTHT
Trigger: TGTGTGTGTATGATGAGCCAATAAACCAGACTGTGT...TGGATGAAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS-3UTR CAA 90 bp ATATTCCAATGTACAAAGTTTACATGGGACTCACAGATCACCCCTCGTCTCTTTACACAGTCTGGTTTATaGGCTCATCATACACACACA +
Preference number: 5 (lower is better)
Translates to: IFQCTKFTWDSQITPRLFTQSGL*AHHTHT
Trigger: TGTGTGTGTATGATGAGCCAATAAACCAGACTGTGT...AAAGAGACGAGGGGTGATCTGTGAGTCCCATGTAAACTTTGTACATTGGAATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000622464.4
CDS CCA 90 bp AGAGCAGAAGTGAGAAATTATGAGTCTGTAGAAGTTAAACTTATTTaGGAGCAAAGAAACTCCAATCACCAAGAAGAGGGAGGTTTTGAA +
Preference number: 5 (lower is better)
Translates to: RAEVRNYESVEVKLI*EQRNSNHQEEGGFE
Trigger: TTCAAAACCTCCCTCTTCTTGGTGATTGGAGTTTCTTTGCTCCCAAATAAGTTTAACTTCTACAGACTCATAATTTCTCACTTCTGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp GGTGTCGGCGTCGGCATGCGGCAGCGGGACGCGGGCTaGGTGGGCACCGTCCGCGAGCTCCTGCGTGTGGGC +
Preference number: 6 (lower is better)
Translates to: GVGVGMRQRDAG*VGTVRELLRVG
Trigger: GCCCACACGCAGGAGCTCGCGGACGGTGCCCACCCAGCCCGCGTCCCGCTGCCGCATGCCGACGCCGACACC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467250.1
CDS CCA 72 bp ACCCCCGACAGGGAGAGCATGGCCAGGCACGGCCTGTaGAGCCCTCGGCCGGCGCCGGAGAGGCCACTGCGC +
Preference number: 6 (lower is better)
Translates to: TPDRESMARHGL*SPRPAPERPLR
Trigger: GCGCAGTGGCCTCTCCGGCGCCGGCCGAGGGCTCCACAGGCCGTGCCTGGCCATGCTCTCCCTGTCGGGGGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469901.5
CDS CCA 72 bp CGGGCCAGCAGCCCTGACTCGGAGCGCCGCACCTCCTaGCCGCGGCGCAGGCGGAAGCTGAAGCTCTTCCTG +
Preference number: 6 (lower is better)
Translates to: RASSPDSERRTS*PRRRRKLKLFL
Trigger: CAGGAAGAGCTTCAGCTTCCGCCTGCGCCGCGGCCAGGAGGTGCGGCGCTCCGAGTCAGGGCTGCTGGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000335367.7
CDS CCA 72 bp ACACTCCTGGCTGCCGGCCCGGCGAGCATATGCCAGTaGAGTCAGGCCCCGGGCGTCCCGGCTCCTCACGTC +
Preference number: 6 (lower is better)
Translates to: TLLAAGPASICQ*SQAPGVPAPHV
Trigger: GACGTGAGGAGCCGGGACGCCCGGGGCCTGACTCCACTGGCATATGCTCGCCGGGCCGGCAGCCAGGAGTGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS TCA 72 bp CAGCTCCCGCTGGCTGATGCTGGGGGTGGAGGGGACTaGGGACGAGTAGTCGCTGAAGGCGCTGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: QLPLADAGGGGD*GRVVAEGAAAA
Trigger: GGCGGCGGCAGCGCCTTCAGCGACTACTCGTCCTCAGTCCCCTCCACCCCCAGCATCAGCCAGCGGGAGCTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000335367.7
ENST00000397238.7
ENST00000463381.5
ENST00000467724.5
ENST00000468796.1
ENST00000473312.5
ENST00000480106.1
ENST00000486946.1
ENST00000498559.5
ENST00000622464.4
CDS GCA 72 bp GAGGCTGATTGGCCGAGGAGTCCGCCCAGGCCCAGCTaGTCCTCGCTTACAGCGTCCCGCCTTCAGTGCGGC +
Preference number: 6 (lower is better)
Translates to: EADWPRSPPRPS*SSLTASRLQCG
Trigger: GCCGCACTGAAGGCGGGACGCTGTAAGCGAGGAGCAGCTGGGCCTGGGCGGACTCCTCGGCCAATCAGCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490097.5
CDS CCA 72 bp AGGGCCCCGCCTCACCCTGCGTGCCCACAAGCACCATaGGCACCTCGCTGGCGTTGCGGAAGCTGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: RAPPHPACPQAP*APRWRCGSCRD
Trigger: GTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCACGCAGGGTGAGGCGGGGCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS TCA 72 bp GGCGCATGGAGTGACGCGGAGGGGCGGGCGCTCTCGTaGCAACCCACACGGGGGTTCACCCACCTTTGTCTG +
Preference number: 6 (lower is better)
Translates to: GAWSDAEGRALS*QPTRGFTHLCL
Trigger: CAGACAAAGGTGGGTGAACCCCCGTGTGGGTTGTCACGAGAGCGCCCGCCCCTCCGCGTCACTCCATGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS GCA 72 bp GCCGCGGACGGTGCGGACGGCCTGCACAGCCAGAGCTaGGTTCTGGTTCCCCAGTCGAGTCTTGTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: AADGADGLHSQS*VLVPQSSLVLG
Trigger: GCCAAGGACAAGACTCGACTGGGGAACCAGAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 72 bp ATCGTTGCCCGGGACTTCCTGCTCTCTGCCAGCTCCTaGAGGGCCCCGCCTCACCCTGCGTGCCCACAAGCA +
Preference number: 6 (lower is better)
Translates to: IVARDFLLSASS*RAPPHPACPQA
Trigger: TGCTTGTGGGCACGCAGGGTGAGGCGGGGCCCTGCAGGAGCTGGCAGAGAGCAGGAAGTCCCGGGCAACGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS CAA 90 bp GGGGCGGGCGCTCTCGTGACAACCCACACGGGGGTTCACCCACCTTaGTCTGGCCCAAGACTCCTGGAACATCCAGCCAAGCCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: GAGALVTTHTGVHPP*SGPRLLEHPAKPGW
Trigger: CCAGCCGGGCTTGGCTGGATGTTCCAGGAGTCTTGGGCCAGACAAAGGTGGGTGAACCCCCGTGTGGGTTGTCACGAGAGCGCCCGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS GCA 72 bp AGCCGCAGGTCATCTTCCACCACGGCCCGGAGCAGCTaGTGCCCCAGTGGCACATCTGAGCTTGGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: SRRSSSTTARSS*CPSGTSELGSG
Trigger: CCCACTGCCAAGCTCAGATGTGCCACTGGGGCAGCAGCTGCTCCGGGCCGTGGTGGAAGATGACCTGCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 72 bp GCCCTCCCCAGGGCAGCCATGCTGGATCAAGATGTCTaGACACTCCTGGCTGCCGGCCCGGCGAGCATATGC +
Preference number: 6 (lower is better)
Translates to: ALPRAAMLDQDV*TLLAAGPASIC
Trigger: GCATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGCTGCCCTGGGGAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 72 bp AGGAGCGAGGGCACGGGGCTGTCTCCTCCATGCCACTaGCGCTCCCAGGTGAGGGATGTCAGGGACAGGAAC +
Preference number: 6 (lower is better)
Translates to: RSEGTGLSPPCH*RSQVRDVRDRN
Trigger: GTTCCTGTCCCTGACATCCCTCACCTGGGAGCGGCAGTGGCATGGAGGAGACAGCCCCGTGCCCTCGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467250.1
CDS GCA 72 bp CTCCCTGTCTCCCTGCCCAGGCTCTCCACTGCCGGCTaGAGCAGTGCTCTCCTAAAAGACCCTCCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: LPVSLPRLSTAG*SSALLKDPPPA
Trigger: GGCAGGGGGAGGGTCTTTTAGGAGAGCACTGCTGCAGCCGGCAGTGGAGAGCCTGGGCAGGGAGACAGGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490097.5
CDS CCA 72 bp AGCGCCGCTTGGACTGCTTTCGGATGGGTGTGGGGGTaGAGGAGGCAGCGATGGTCTCGATGCGCAGCTCCC +
Preference number: 6 (lower is better)
Translates to: SAAWTAFGWVWG*RRQRWSRCAAP
Trigger: GGGAGCTGCGCATCGAGACCATCGCTGCCTCCTCCACCCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000335367.7
ENST00000397238.7
ENST00000463381.5
ENST00000467724.5
ENST00000468796.1
ENST00000473312.5
ENST00000475145.1
ENST00000480106.1
ENST00000486946.1
ENST00000498559.5
ENST00000622464.4
CDS CCA 72 bp TACCTCAGCTGGGCCACTGGCAGGGTGCTGCATGCCTaGGGGCAGGGAAGTGGTGGCCTCACTCCACTGGTC +
Preference number: 6 (lower is better)
Translates to: YLSWATGRVLHA*GQGSGGLTPLV
Trigger: GACCAGTGGAGTGAGGCCACCACTTCCCTGCCCCCAGGCATGCAGCACCCTGCCAGTGGCCCAGCTGAGGTA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397238.7
ENST00000622464.4
CDS CCA 72 bp AGAAGGGAGGCAGAGGAGGGGAGGGGCGCAGGGCACTaGGAGGAGGAGAGGACCAGTCCTGCCAACTGTAGC +
Preference number: 6 (lower is better)
Translates to: RREAEEGRGAGH*EEERTSPANCS
Trigger: GCTACAGTTGGCAGGACTGGTCCTCTCCTCCTCCCAGTGCCCTGCGCCCCTCCCCTCCTCTGCCTCCCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp CTTGGGCCGGCGAGAATCGGGCGCGGGGCTCAGGGCTaGCCCACGAACTCATCTTCTGTGTGTCCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: LGPARIGRGAQG*PTNSSSVCPVS
Trigger: GGAGACAGGACACACAGAAGATGAGTTCGTGGGCCAGCCCTGAGCCCCGCGCCCGATTCTCGCCGGCCCAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483971.1
CDS CAA 72 bp CCCAAGGCCCCCTCCCAGACGCTGTTGGCGAGGGCATaGCCCATGGCAGTCATGACAGCCAGCAGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: PKAPSQTLLARA*PMAVMTASSSG
Trigger: GCCTGAGCTGCTGGCTGTCATGACTGCCATGGGCAATGCCCTCGCCAACAGCGTCTGGGAGGGGGCCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CAA 72 bp GCTGCCGCCGCCATTCGTGGCCTGTACAAGAGGTGCTaGGACCACTGCCCCTCCACAACCTGCCCCTCGGGA +
Preference number: 6 (lower is better)
Translates to: AAAAIRGLYKRC*DHCPSTTCPSG
Trigger: TCCCGAGGGGCAGGTTGTGGAGGGGCAGTGGTCCAAGCACCTCTTGTACAGGCCACGAATGGCGGCGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486946.1
CDS TCA 72 bp TGCTGGGGGTGGAGGGGACTGAGGACGAGTAGTCGCTaGAGGCGCTGCCGCCGCCATTCGTGGCCTGTACAA +
Preference number: 6 (lower is better)
Translates to: CWGWRGLRTSSR*RRCRRHSWPVQ
Trigger: TTGTACAGGCCACGAATGGCGGCGGCAGCGCCTTCAGCGACTACTCGTCCTCAGTCCCCTCCACCCCCAGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486946.1
CDS GCA 72 bp CATTACAGGAGCGAGGGCACGGGGCTGTCTCCTCCATaGCACTGCCGCTCCCAGGTGAGGGATGTCAGGGAC +
Preference number: 6 (lower is better)
Translates to: HYRSEGTGLSPP*HCRSQVRDVRD
Trigger: GTCCCTGACATCCCTCACCTGGGAGCGGCAGTGGCATGGAGGAGACAGCCCCGTGCCCTCGCTCCTGTAATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467250.1
CDS CCA 72 bp ACGGTGCGGACGGCCTGCACAGCCAGAGCTGCGTTCTaGTTCCCCAGTCGAGTCTTGTCCTTGGCACTGCGG +
Preference number: 6 (lower is better)
Translates to: TVRTACTARAAF*FPSRVLSLALR
Trigger: CCGCAGTGCCAAGGACAAGACTCGACTGGGGAACCAGAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CCA 72 bp AGTCCCACTGCCCACCTCCTGTGCCCGGTTTCCCTCTaGGTCCCCCTAACCTTCAGTAGCACTGCTGGGGCC +
Preference number: 6 (lower is better)
Translates to: SPTAHLLCPVSL*VPLTFSSTAGA
Trigger: GGCCCCAGCAGTGCTACTGAAGGTTAGGGGGACCCAGAGGGAAACCGGGCACAGGAGGTGGGCAGTGGGACT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp GGGCAGCCATGCTGGATCAAGATGTCTGCACACTCCTaGCTGCCGGCCCGGCGAGCATATGCCAGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: GQPCWIKMSAHS*LPARRAYASGV
Trigger: GACTCCACTGGCATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGCTGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CCA 72 bp GGAGAAGGATGTGACGGGGTGCTAGGAGGCAAACACTaGGAGAGGGTGGGGGAAGGCGGGTGTGGGCACCAT +
Preference number: 6 (lower is better)
Translates to: GEGCDGVLGGKH*ERVGEGGCGHH
Trigger: ATGGTGCCCACACCCGCCTTCCCCCACCCTCTCCCAGTGTTTGCCTCCTAGCACCCCGTCACATCCTTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp CACCCTGCGTGCCCACAAGCACCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGAGACGCAGGAAGTAGT +
Preference number: 6 (lower is better)
Translates to: HPACPQAPWAPR*RCGSCRDAGSS
Trigger: ACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCACGCAGGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS CAA 72 bp CCCCAGTCGAGTCTTGTCCTTGGCACTGCGGCAGCCTaGCAGGCTGGCAAGGATCTGGGCCTGCACACTCTG +
Preference number: 6 (lower is better)
Translates to: PQSSLVLGTAAA*QAGKDLGLHTL
Trigger: CAGAGTGTGCAGGCCCAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGACTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CAA 90 bp CTGGCCCAGTCTGGATTGGGTGCATCGCAGTCGATACAAAAGCTGTaGCCGCGGACGGTGCGGACGGCCTGCACAGCCAGAGCTGCGTTC +
Preference number: 6 (lower is better)
Translates to: LAQSGLGASQSIQKL*PRTVRTACTARAAF
Trigger: GAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGACTGCGATGCACCCAATCCAGACTGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CAA 90 bp AGGAGGCTAGGACTACGGTGCAGCTCAGCAGAGGGGTTGGTGCCATaGGCAGGCTCTCTGTTGGGGGTAGGCGCTAAGCCACAGCCCTCC +
Preference number: 6 (lower is better)
Translates to: RRLGLRCSSAEGLVP*AGSLLGVGAKPQPS
Trigger: GGAGGGCTGTGGCTTAGCGCCTACCCCCAACAGAGAGCCTGCCAATGGCACCAACCCCTCTGCTGAGCTGCACCGTAGTCCTAGCCTCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CAA 90 bp CCCGGCTGGAGGATTAGGGTTTGGATGGGCACTGTGTGTCGCACATaGGGAGTGGAGAGACAGCAGGCCCTGGGGCCTGAGAGCCAGAGG +
Preference number: 6 (lower is better)
Translates to: PGWRIRVWMGTVCRT*GVERQQALGPESQR
Trigger: CCTCTGGCTCTCAGGCCCCAGGGCCTGCTGTCTCTCCACTCCCAATGTGCGACACACAGTGCCCATCCAAACCCTAATCCTCCAGCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CAA 90 bp GGAGCGCTCACTGCAGGTGAGTGCCAAGCCGGAAGCGGGCTCCTGTaGAAGGCCTATACTCTCCCTGGCTGTATCCGCTTGGCTCCCTCC +
Preference number: 6 (lower is better)
Translates to: GALTAGECQAGSGLL*KAYTLPGCIRLAPS
Trigger: GGAGGGAGCCAAGCGGATACAGCCAGGGAGAGTATAGGCCTTCAACAGGAGCCCGCTTCCGGCTTGGCACTCACCTGCAGTGAGCGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS TCA 72 bp GAGATCTTCCAACTTGTGGAACGAGCTGGGTGGTGCTaGCACCCATCGCCGCAGTGCTCCTTGAGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: EIFQLVERAGWC*HPSPQCSLRGP
Trigger: GGGGCCCCTCAAGGAGCACTGCGGCGATGGGTGTCAGCACCACCCAGCTCGTTCCACAAGTTGGAAGATCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478320.1
CDS GCA 72 bp ATACAAAAGCTGTTGCCGCGGACGGTGCGGACGGCCTaGACAGCCAGAGCTGCGTTCTGGTTCCCCAGTCGA +
Preference number: 6 (lower is better)
Translates to: IQKLLPRTVRTA*TARAAFWFPSR
Trigger: TCGACTGGGGAACCAGAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTTTGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 72 bp CATCGCAGTCGATACAAAAGCTGTTGCCGCGGACGGTaGGGACGGCCTGCACAGCCAGAGCTGCGTTCTGGT +
Preference number: 6 (lower is better)
Translates to: HRSRYKSCCRGR*GRPAQPELRSG
Trigger: ACCAGAACGCAGCTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGACTGCGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 72 bp CTGGATTGGGTGCATCGCAGTCGATACAAAAGCTGTTaGCGCGGACGGTGCGGACGGCCTGCACAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: LDWVHRSRYKSC*RGRCGRPAQPE
Trigger: CTCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGACTGCGATGCACCCAATCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 72 bp AGCCATGCTGGATCAAGATGTCTGCACACTCCTGGCTaGCGGCCCGGCGAGCATATGCCAGTGGAGTCAGGC +
Preference number: 6 (lower is better)
Translates to: SHAGSRCLHTPG*RPGEHMPVESG
Trigger: GCCTGACTCCACTGGCATATGCTCGCCGGGCCGGCAGCCAGGAGTGTGCAGACATCTTGATCCAGCATGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 72 bp TTCTGGGAGAGCCAGAGGCTGCGCAGGGACCCTGTGTaGCTTAGGAAGCAGCCTGTCCCCAGATCTTCACGG +
Preference number: 6 (lower is better)
Translates to: FWESQRLRRDPV*LRKQPVPRSSR
Trigger: CCGTGAAGATCTGGGGACAGGCTGCTTCCTAAGGCACACAGGGTCCCTGCGCAGCCTCTGGCTCTCCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478320.1
CDS GCA 72 bp CATCAGGGCTCCTGGCCTGCGTGCACACCCAGGGCATaGTATCGCCACAACTCCACTCACTACCCTGCTCCA +
Preference number: 6 (lower is better)
Translates to: HQGSWPACTPRA*YRHNSTHYPAP
Trigger: TGGAGCAGGGTAGTGAGTGGAGTTGTGGCGATAGCATGCCCTGGGTGTGCACGCAGGCCAGGAGCCCTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp CATCCTGCGTGCCCACAAGCACCATGGGCACCTCGCTaGCGTTGCGGAAGCTGCAGAGACGCAGGAAGTAGT +
Preference number: 6 (lower is better)
Translates to: HPACPQAPWAPR*RCGSCRDAGSS
Trigger: ACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCACGCAGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000335367.7
ENST00000397238.7
ENST00000463381.5
ENST00000469901.5
ENST00000473312.5
ENST00000476375.5
ENST00000479901.5
ENST00000492234.5
ENST00000622464.4
CDS CCA 72 bp CGGGGGTTCACCCACCTTTGTCTGGCCCAAGACTCCTaGAACATCCAGCCAAGCCCGGCTGGAGGATTAGGG +
Preference number: 6 (lower is better)
Translates to: RGFTHLCLAQDS*NIQPSPAGGLG
Trigger: CCCTAATCCTCCAGCCGGGCTTGGCTGGATGTTCCAGGAGTCTTGGGCCAGACAAAGGTGGGTGAACCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CCA 72 bp CGTGACAACCCACACGGGGGTTCACCCACCTTTGTCTaGCCCAAGACTCCTGGAACATCCAGCCAAGCCCGG +
Preference number: 6 (lower is better)
Translates to: RDNPHGGSPTFV*PKTPGTSSQAR
Trigger: CCGGGCTTGGCTGGATGTTCCAGGAGTCTTGGGCCAGACAAAGGTGGGTGAACCCCCGTGTGGGTTGTCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CCA 72 bp GGGACCAGCAGGTCCTGGAAAGATCCCGGGCTCCTTTaGGGCTCCTGGCTAGCTTGGTACAACATCCTGCGC +
Preference number: 6 (lower is better)
Translates to: GTSRSWKDPGLL*GSWLAWYNILR
Trigger: GCGCAGGATGTTGTACCAAGCTAGCCAGGAGCCCCAAAGGAGCCCGGGATCTTTCCAGGACCTGCTGGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS CCA 72 bp TGGGAGGAGGAGAGGACCAGTCCTGCCAACTGTAGCTaGGCCACACTCAGGAGAGCCAGACGGACACCTCTC +
Preference number: 6 (lower is better)
Translates to: WEEERTSPANCS*ATLRRARRTPL
Trigger: GAGAGGTGTCCGTCTGGCTCTCCTGAGTGTGGCCCAGCTACAGTTGGCAGGACTGGTCCTCTCCTCCTCCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CAA 72 bp GCACCCTTCCGAGACGTGAAGATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGTGTGGGGGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: APFRDVKMLERR*DCFRMGVGVEE
Trigger: CTCCTCCACCCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACATCTTCACGTCTCGGAAGGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397238.7
ENST00000463381.5
ENST00000498559.5
ENST00000622464.4
CDS CAA 72 bp GGACTACGGTGCAGCTCAGCAGAGGGGTTGGTGCCATaGGCAGGCTCTCTGTTGGGGGTAGGCGCTAAGCCA +
Preference number: 6 (lower is better)
Translates to: GLRCSSAEGLVP*AGSLLGVGAKP
Trigger: TGGCTTAGCGCCTACCCCCAACAGAGAGCCTGCCAATGGCACCAACCCCTCTGCTGAGCTGCACCGTAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CAA 90 bp GTTCTGGTTCCCCAGTCGAGTCTTGTCCTTGGCACTGCGGCAGCCTaGCAGGCTGGCAAGGATCTGGGCCTGCACACTCTGAACCCACAG +
Preference number: 6 (lower is better)
Translates to: VLVPQSSLVLGTAAA*QAGKDLGLHTLNPQ
Trigger: CTGTGGGTTCAGAGTGTGCAGGCCCAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGCCAAGGACAAGACTCGACTGGGGAACCAGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CAA 90 bp CACAACGACTGGGACCAGCAGGTCCTGGAAAGATCCCGGGCTCCTTaGGGGCTCCTGGCTAGCTTGGTACAACATCCTGCGCTCCACGTG +
Preference number: 6 (lower is better)
Translates to: HNDWDQQVLERSRAP*GLLASLVQHPALHV
Trigger: CACGTGGAGCGCAGGATGTTGTACCAAGCTAGCCAGGAGCCCCAAAGGAGCCCGGGATCTTTCCAGGACCTGCTGGTCCCAGTCGTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS TCA 72 bp CTGCAGGTGAGTGCCAAGCCGGAAGCGGGCTCCTGTTaGAGGCCTATACTCTCCCTGGCTGTATCCGCTTGG +
Preference number: 6 (lower is better)
Translates to: LQVSAKPEAGSC*RPILSLAVSAW
Trigger: CCAAGCGGATACAGCCAGGGAGAGTATAGGCCTTCAACAGGAGCCCGCTTCCGGCTTGGCACTCACCTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS TCA 72 bp CAGAAACCAGGAGCCAGCCCCCTAGGTCATAGGGCATaGGGAGGTCACGATGTCGTCAGGCAATGCCCTCCC +
Preference number: 6 (lower is better)
Translates to: QKPGASPLGHRA*GGHDVVRQCPP
Trigger: GGGAGGGCATTGCCTGACGACATCGTGACCTCCTCATGCCCTATGACCTAGGGGGCTGGCTCCTGGTTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494808.1
CDS GCA 72 bp GCGTGCCCACAAGCACCATGGGCACCTCGCTGGCGTTaGGGAAGCTGCAGAGACGCAGGAAGTAGTTGTACA +
Preference number: 6 (lower is better)
Translates to: ACPQAPWAPRWR*GSCRDAGSSCT
Trigger: TGTACAACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTGTGGGCACGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000335367.7
ENST00000397238.7
ENST00000463381.5
ENST00000469901.5
ENST00000473312.5
ENST00000476375.5
ENST00000479901.5
ENST00000490097.5
ENST00000490839.1
ENST00000492234.5
ENST00000622464.4
CDS GCA 72 bp CCTCTTCCTGGGCCTTATAGGAGGCTAGGACTACGGTaGAGCTCAGCAGAGGGGTTGGTGCCATTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: PLPGPYRRLGLR*SSAEGLVPLAG
Trigger: GCCTGCCAATGGCACCAACCCCTCTGCTGAGCTGCACCGTAGTCCTAGCCTCCTATAAGGCCCAGGAAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS GCA 72 bp AACCCAAGCTGTCAGGGAGCGCTCACTGCAGGTGAGTaGCAAGCCGGAAGCGGGCTCCTGTTGAAGGCCTAT +
Preference number: 6 (lower is better)
Translates to: NPSCQGALTAGE*QAGSGLLLKAY
Trigger: ATAGGCCTTCAACAGGAGCCCGCTTCCGGCTTGGCACTCACCTGCAGTGAGCGCTCCCTGACAGCTTGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS GCA 72 bp AGGGTACTATCCCCAAGTCCCACTGCCCACCTCCTGTaGCCGGTTTCCCTCTGGGTCCCCCTAACCTTCAGT +
Preference number: 6 (lower is better)
Translates to: RVLSPSPTAHLL*PVSLWVPLTFS
Trigger: ACTGAAGGTTAGGGGGACCCAGAGGGAAACCGGGCACAGGAGGTGGGCAGTGGGACTTGGGGATAGTACCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp GAGTCTTGTCCTTGGCACTGCGGCAGCCTTGCAGGCTaGCAAGGATCTGGGCCTGCACACTCTGAACCCACA +
Preference number: 6 (lower is better)
Translates to: ESCPWHCGSLAG*QGSGPAHSEPT
Trigger: TGTGGGTTCAGAGTGTGCAGGCCCAGATCCTTGCCAGCCTGCAAGGCTGCCGCAGTGCCAAGGACAAGACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CCA 72 bp GGCCCAAGACTCCTGGAACATCCAGCCAAGCCCGGCTaGAGGATTAGGGTTTGGATGGGCACTGTGTGTCGC +
Preference number: 6 (lower is better)
Translates to: GPRLLEHPAKPG*RIRVWMGTVCR
Trigger: GCGACACACAGTGCCCATCCAAACCCTAATCCTCCAGCCGGGCTTGGCTGGATGTTCCAGGAGTCTTGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CCA 72 bp GCTATCGCCACAACTCCACTCACTACCCTGCTCCACTaGCAAGTGTCCTCCCCTAGACCCTTCCCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: AIATTPLTTLLH*QVSSPRPFPSC
Trigger: GCAGCTGGGGAAGGGTCTAGGGGAGGACACTTGCCAGTGGAGCAGGGTAGTGAGTGGAGTTGTGGCGATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CAA 72 bp TCTGGATTGGGTGCATCGCAGTCGATACAAAAGCTGTaGCCGCGGACGGTGCGGACGGCCTGCACAGCCAGA +
Preference number: 6 (lower is better)
Translates to: SGLGASQSIQKL*PRTVRTACTAR
Trigger: TCTGGCTGTGCAGGCCGTCCGCACCGTCCGCGGCAACAGCTTTTGTATCGACTGCGATGCACCCAATCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397238.7
ENST00000461065.1
ENST00000463381.5
ENST00000473633.1
ENST00000622464.4
CDS CAA 72 bp CGCCGGTTCATTAGCGTGAAGATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGTGTGGGGGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: RRFISVKMLERR*DCFRMGVGVEE
Trigger: CTCCTCCACCCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACATCTTCACGCTAATGAACCGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000463179.1
ENST00000467724.5
ENST00000468796.1
ENST00000475145.1
ENST00000486946.1
CDS CAA 72 bp CAGCCTTCCGGCCGCCGGTTCATTAGCGTGAAGATGTaGGAGCGCCGCTTGGACTGCTTTCGGATGGGTGTG +
Preference number: 6 (lower is better)
Translates to: QPSGRRFISVKM*ERRLDCFRMGV
Trigger: CACACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACATCTTCACGCTAATGAACCGGCGGCCGGAAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463179.1
ENST00000467724.5
ENST00000468796.1
ENST00000475145.1
ENST00000486946.1
CDS CAA 72 bp TGGGACCAGCAGGTCCTGGAAAGATCCCGGGCTCCTTaGGGGCTCCTGGCTAGCTTGGTACAACATCCTGCG +
Preference number: 6 (lower is better)
Translates to: WDQQVLERSRAP*GLLASLVQHPA
Trigger: CGCAGGATGTTGTACCAAGCTAGCCAGGAGCCCCAAAGGAGCCCGGGATCTTTCCAGGACCTGCTGGTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS TCA 72 bp TGGGCAAACAGCCTTCCGGCCGCCGGTTCATTAGCGTaGAGATGTTGGAGCGCCGCTTGGACTGCTTTCGGA +
Preference number: 6 (lower is better)
Translates to: WANSLPAAGSLA*RCWSAAWTAFG
Trigger: TCCGAAAGCAGTCCAAGCGGCGCTCCAACATCTTCACGCTAATGAACCGGCGGCCGGAAGGCTGTTTGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000463179.1
ENST00000467724.5
ENST00000468796.1
ENST00000475145.1
ENST00000486946.1
CDS TCA 72 bp TCCTGCGCTCCACGTGCCCAGTGTCCCCATTTGGACTaGGGCCCTCGTTCTCCTGCATCCCTCTTTCTAGGA +
Preference number: 6 (lower is better)
Translates to: SCAPRAQCPHLD*GPRSPASLFLG
Trigger: TCCTAGAAAGAGGGATGCAGGAGAACGAGGGCCTCAGTCCAAATGGGGACACTGGGCACGTGGAGCGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS GCA 72 bp CAAGCACCATGGGCACCTCGCTGGCGTTGCGGAAGCTaGAGAGACGCAGGAAGTAGTTGTACACCGTCTGGA +
Preference number: 6 (lower is better)
Translates to: QAPWAPRWRCGS*RDAGSSCTPSG
Trigger: TCCAGACGGTGTACAACTACTTCCTGCGTCTCTGCAGCTTCCGCAACGCCAGCGAGGTGCCCATGGTGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000335367.7
ENST00000397238.7
ENST00000463381.5
ENST00000469901.5
ENST00000473312.5
ENST00000476375.5
ENST00000479901.5
ENST00000490097.5
ENST00000490839.1
ENST00000492234.5
ENST00000622464.4
CDS GCA 72 bp TCCTGGCTAGCTTGGTACAACATCCTGCGCTCCACGTaGCCAGTGTCCCCATTTGGACTGAGGCCCTCGTTC +
Preference number: 6 (lower is better)
Translates to: SWLAWYNILRST*PVSPFGLRPSF
Trigger: GAACGAGGGCCTCAGTCCAAATGGGGACACTGGGCACGTGGAGCGCAGGATGTTGTACCAAGCTAGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS GCA 72 bp CAGGGCATGCTATCGCCACAACTCCACTCACTACCCTaGTCCACTGGCAAGTGTCCTCCCCTAGACCCTTCC +
Preference number: 6 (lower is better)
Translates to: QGMLSPQLHSLP*STGKCPPLDPS
Trigger: GGAAGGGTCTAGGGGAGGACACTTGCCAGTGGAGCAGGGTAGTGAGTGGAGTTGTGGCGATAGCATGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp GGATTAGGGTTTGGATGGGCACTGTGTGTCGCACATTaGGAGTGGAGAGACAGCAGGCCCTGGGGCCTGAGA +
Preference number: 6 (lower is better)
Translates to: GLGFGWALCVAH*EWRDSRPWGLR
Trigger: TCTCAGGCCCCAGGGCCTGCTGTCTCTCCACTCCCAATGTGCGACACACAGTGCCCATCCAAACCCTAATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CCA 72 bp CACAGACCTGCTAGTCACAGGGACAGCAGGTTTCAGTaGGGGCAAAAGCCCTCAGACACGAGCAGCACGGAG +
Preference number: 6 (lower is better)
Translates to: HRPASHRDSRFQ*GQKPSDTSSTE
Trigger: CTCCGTGCTGCTCGTGTCTGAGGGCTTTTGCCCCCACTGAAACCTGCTGTCCCTGTGACTAGCAGGTCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS CAA 72 bp AGGATTAGGGTTTGGATGGGCACTGTGTGTCGCACATaGGGAGTGGAGAGACAGCAGGCCCTGGGGCCTGAG +
Preference number: 6 (lower is better)
Translates to: RIRVWMGTVCRT*GVERQQALGPE
Trigger: CTCAGGCCCCAGGGCCTGCTGTCTCTCCACTCCCAATGTGCGACACACAGTGCCCATCCAAACCCTAATCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CAA 72 bp GCTCTCGTGACAACCCACACGGGGGTTCACCCACCTTaGTCTGGCCCAAGACTCCTGGAACATCCAGCCAAG +
Preference number: 6 (lower is better)
Translates to: ALVTTHTGVHPP*SGPRLLEHPAK
Trigger: CTTGGCTGGATGTTCCAGGAGTCTTGGGCCAGACAAAGGTGGGTGAACCCCCGTGTGGGTTGTCACGAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CAA 72 bp ACTGCAGGTGAGTGCCAAGCCGGAAGCGGGCTCCTGTaGAAGGCCTATACTCTCCCTGGCTGTATCCGCTTG +
Preference number: 6 (lower is better)
Translates to: TAGECQAGSGLL*KAYTLPGCIRL
Trigger: CAAGCGGATACAGCCAGGGAGAGTATAGGCCTTCAACAGGAGCCCGCTTCCGGCTTGGCACTCACCTGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS CAA 90 bp CTGGCTTGGGCCCCTGCACCCTCCATTCTAGTCCACATATGCCATTaGCTTCGCCTCAGCTTTACTGCCATTCTGTGCCCCCACCCAGCT +
Preference number: 6 (lower is better)
Translates to: LAWAPAPSILVHICH*LRLSFTAILCPHPA
Trigger: AGCTGGGTGGGGGCACAGAATGGCAGTAAAGCTGAGGCGAAGCAAATGGCATATGTGGACTAGAATGGAGGGTGCAGGGGCCCAAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478320.1
CDS CAA 90 bp CGGGTGTGGGCACCATCCGTACATGTCAGCTGCAGCCGCCTCATTTaGCAGCTCATTAAACCCAATATTCCTGACGGCGTCAGCGTGGGG +
Preference number: 6 (lower is better)
Translates to: RVWAPSVHVSCSRLI*QLIKPNIPDGVSVG
Trigger: CCCCACGCTGACGCCGTCAGGAATATTGGGTTTAATGAGCTGCAAAATGAGGCGGCTGCAGCTGACATGTACGGATGGTGCCCACACCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp ATCCAGCCAAGCCCGGCTGGAGGATTAGGGTTTGGATaGGCACTGTGTGTCGCACATTGGGAGTGGAGAGAC +
Preference number: 6 (lower is better)
Translates to: IQPSPAGGLGFG*ALCVAHWEWRD
Trigger: GTCTCTCCACTCCCAATGTGCGACACACAGTGCCCATCCAAACCCTAATCCTCCAGCCGGGCTTGGCTGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463179.1
CDS CAA 72 bp ACAGTGGCACATATCGTGAAGATGTTGGAGCGCCGCTaGGACTGCTTTCGGATGGGTGTGGGGGTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: TVAHIVKMLERR*DCFRMGVGVEE
Trigger: CTCCTCCACCCCCACACCCATCCGAAAGCAGTCCAAGCGGCGCTCCAACATCTTCACGATATGTGCCACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000335367.7
ENST00000473312.5
CDS TCA 72 bp CTGCACATAGTGAGCCCTCCAGCTCTCCCTCCCAGCTaGAGGCTGTACTTCTTCCACTCCCTAAGGCCAAGT +
Preference number: 6 (lower is better)
Translates to: LHIVSPPALPPS*RLYFFHSLRPS
Trigger: ACTTGGCCTTAGGGAGTGGAAGAAGTACAGCCTTCAGCTGGGAGGGAGAGCTGGAGGGCTCACTATGTGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476375.5
CDS TCA 72 bp AAAGACAGCACAGGTGCCTGTGGTAAGGCCCCAGGGTaGACCCCAGTTCTGCCAAGGCCATCTCTGCTTGTA +
Preference number: 6 (lower is better)
Translates to: KDSTGACGKAPG*TPVLPRPSLLV
Trigger: TACAAGCAGAGATGGCCTTGGCAGAACTGGGGTTCACCCTGGGGCCTTACCACAGGCACCTGTGCTGTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS TCA 72 bp TTCAGGGACTTGCCGCTCCGCTTTAGCAGGATCCCCTaGGAACAGAGGTCTGATCAGAAACCAGGAGCCAGC +
Preference number: 6 (lower is better)
Translates to: FRDLPLRFSRIP*EQRSDQKPGAS
Trigger: GCTGGCTCCTGGTTTCTGATCAGACCTCTGTTCTCAGGGGATCCTGCTAAAGCGGAGCGGCAAGTCCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494808.1
CDS GCA 72 bp GGCACTGCCGGGAATGGGTGTGAAACCAGAGAGGGGTaGATCCCACAGAAAGAGCTGAGTATCTGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: GTAGNGCETREG*IPQKELSIWRR
Trigger: CCTTCTCCAGATACTCAGCTCTTTCTGTGGGATGCACCCCTCTCTGGTTTCACACCCATTCCCGGCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473633.1
CDS CCA 72 bp AGTTGGAAACAGTGGCACATATCCTCTGTGTCGCCTTaGGCAAACAGCCTTCCGGCCGCCGGTTCATTAGCG +
Preference number: 6 (lower is better)
Translates to: SWKQWHISSVSP*ANSLPAAGSLA
Trigger: CGCTAATGAACCGGCGGCCGGAAGGCTGTTTGCCCAAGGCGACACAGAGGATATGTGCCACTGTTTCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468796.1
CDS CCA 72 bp CTCTGCATCAGAGATCTTCCAACTTGTGGAACGAGCTaGGTGGTGCTGACACCCATCGCCGCAGTGCTCCTT +
Preference number: 6 (lower is better)
Translates to: LCIRDLPTCGTS*VVLTPIAAVLL
Trigger: AAGGAGCACTGCGGCGATGGGTGTCAGCACCACCCAGCTCGTTCCACAAGTTGGAAGATCTCTGATGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478320.1
CDS CCA 72 bp GAGTGGAACACACAGAGCACCAAGAACGCGGGTGCCTaGGTCTCATTTCAACCCTTCCATGGCCTCACTGAG +
Preference number: 6 (lower is better)
Translates to: EWNTQSTKNAGA*VSFQPFHGLTE
Trigger: CTCAGTGAGGCCATGGAAGGGTTGAAATGAGACCCAGGCACCCGCGTTCTTGGTGCTCTGTGTGTTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490839.1
CDS CAA 90 bp TGGGCCACTTTGAGCAAAGCAGCCTTTAAGGACCTATCGGTGAACTaGGGAAGGCCCCTTAGACCAGTCCTTCCCCAGAACTCGGCTCTC +
Preference number: 6 (lower is better)
Translates to: WATLSKAAFKDLSVN*GRPLRPVLPQNSAL
Trigger: GAGAGCCGAGTTCTGGGGAAGGACTGGTCTAAGGGGCCTTCCCAAGTTCACCGATAGGTCCTTAAAGGCTGCTTTGCTCAAAGTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000494808.1
CDS GCA 72 bp GGAAGGCGGGTGTGGGCACCATCCGTACATGTCAGCTaGAGCCGCCTCATTTTGCAGCTCATTAAACCCAAT +
Preference number: 6 (lower is better)
Translates to: GRRVWAPSVHVS*SRLILQLIKPN
Trigger: ATTGGGTTTAATGAGCTGCAAAATGAGGCGGCTGCAGCTGACATGTACGGATGGTGCCCACACCCGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts: