Pregenerated sensors for AGAP1-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000235529

Ensembl transcript IDs: ENST00000440498.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	TGTCACTTACAAGGCAAAACCGCACCGGCTGCTGCTGCAGAGCTGTaGCCCAGTCCAGCGGGACGCCCCCGACTCCTCCACCAGCGCTCC	+
Preference number: 5 (lower is better) Translates to: CHLQGKTAPAAAAEL*PSPAGRPRLLHQRS Trigger: GGAGCGCTGGTGGAGGAGTCGGGGGCGTCCCGCTGGACTGGGGCACAGCTCTGCAGCAGCAGCCGGTGCGGTTTTGCCTTGTAAGTGACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000440498.1
CDS GCA 90 bp	GCAGGAGGTCCTAAGTCAGGGTCGCCCCAGCGCGAGGTAACCAGCTaGCCACGAGCTCCAGGGAGAAAGACTCAGCAAGCGGCCACTCCA	+
Preference number: 5 (lower is better) Translates to: AGGPKSGSPQREVTS*PRAPGRKTQQAATP Trigger: TGGAGTGGCCGCTTGCTGAGTCTTTCTCCCTGGAGCTCGTGGGCAGCTGGTTACCTCGCGCTGGGGCGACCCTGACTTAGGACCTCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440498.1
CDS GCA 72 bp	CCTAAGTCAGGGTCGCCCCAGCGCGAGGTAACCAGCTaGCCACGAGCTCCAGGGAGAAAGACTCAGCAAGCG	+
Preference number: 6 (lower is better) Translates to: PKSGSPQREVTS*PRAPGRKTQQA Trigger: CGCTTGCTGAGTCTTTCTCCCTGGAGCTCGTGGGCAGCTGGTTACCTCGCGCTGGGGCGACCCTGACTTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000440498.1
CDS TCA 72 bp	GGCACGCAGGACACTCGGCAACTGTCCATCTATCGATaGCAAGACAGATTCTGGGCAGCTGCTCCATTCAGG	+
Preference number: 6 (lower is better) Translates to: GTQDTRQLSIYR*QDRFWAAAPFR Trigger: CCTGAATGGAGCAGCTGCCCAGAATCTGTCTTGTCATCGATAGATGGACAGTTGCCGAGTGTCCTGCGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440498.1
CDS TCA 72 bp	TCTGGGCAGCTGCTCCATTCAGGGCTGTGCAGGTACTaGTGCTCAGCATTAAAGAGACGACTCACGACTACA	+
Preference number: 6 (lower is better) Translates to: SGQLLHSGLCRY*CSALKRRLTTT Trigger: TGTAGTCGTGAGTCGTCTCTTTAATGCTGAGCATCAGTACCTGCACAGCCCTGAATGGAGCAGCTGCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440498.1
CDS GCA 72 bp	GTCCATCTATCGATGACAAGACAGATTCTGGGCAGCTaGTCCATTCAGGGCTGTGCAGGTACTGATGCTCAG	+
Preference number: 6 (lower is better) Translates to: VHLSMTRQILGS*SIQGCAGTDAQ Trigger: CTGAGCATCAGTACCTGCACAGCCCTGAATGGAGCAGCTGCCCAGAATCTGTCTTGTCATCGATAGATGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000440498.1

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